RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR237 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000094200

Ensembl transcript IDs: ENSMUST00000215911.2, ENSMUST00000216411.2

Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGCCTACATGTGGTTACCCCAGCAACTGGAATAGGGGCTATTTCTaGATCTGTTTCCTGCCTGAGGATCCTGTTCCCATAACTGGACTG +
Preference number: 1 (lower is better)
Translates to: WPTCGYPSNWNRGYF*ICFLPEDPVPITGL
Trigger: CAGTCCAGTTATGGGAACAGGATCCTCAGGCAGGAAACAGATTCAGAAATAGCCCCTATTCCAGTTGCTGGGGTAACCACATGTAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR TCA 90 bp AACATGAATATCTGTCTTCCACTGCACAGTGCCATTATTGTGAACTaGGCTGCACCCGTCACATCCTTCCTGCCAAGATGGACTGAGACC +
Preference number: 1 (lower is better)
Translates to: NMNICLPLHSAIIVN*AAPVTSFLPRWTET
Trigger: GGTCTCAGTCCATCTTGGCAGGAAGGATGTGACGGGTGCAGCTCAGTTCACAATAATGGCACTGTGCAGTGGAAGACAGATATTCATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR TCA 90 bp CATGAATATCTGTCTTCCACTGCACAGTGCCATTATTGTGAACTGAGCTGCACCAATCTGTTTCCTGCCTaGGGATCCTGTTCCCATAAC +
Preference number: 2 (lower is better)
Translates to: HEYLSSTAQCHYCELSCTNLFPA*GSCSHN
Trigger: GTTATGGGAACAGGATCCTCAGGCAGGAAACAGATT...GGTGCAGCTCAGTTCACAATAATGGCACTGTGCAGTGGAAGACAGATATTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR TCA 90 bp TATTCCCTGCATTTAGAATCCCCTGTCCAAAACAGTTTCCACAAGCTCCTTATTAATCTGTTTCCTGCCTaGGGATCCTGTTCCCATAAC +
Preference number: 2 (lower is better)
Translates to: YSLHLESPVQNSFHKLLINLFPA*GSCSHN
Trigger: GTTATGGGAACAGGATCCTCAGGCAGGAAACAGATT...AATAAGGAGCTTGTGGAAACTGTTTTGGACAGGGGATTCTAAATGCAGGGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR TCA 90 bp CATGAATATCTGTCTTCCACTGCACAGTGCCATTATTGTGAACTGAGCTGCACCGAGAGAACTTATTCCTaGAATTTGTTCTCTGACCTC +
Preference number: 2 (lower is better)
Translates to: HEYLSSTAQCHYCELSCTERTYS*NLFSDL
Trigger: GAGGTCAGAGAACAAATTTCAGGAATAAGTTCTCTC...GGTGCAGCTCAGTTCACAATAATGGCACTGTGCAGTGGAAGACAGATATTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR CCA 90 bp TATTCCCTGCATTTAGAATCCCCTGTCCAAAACAGTTTCCACAAGCTCCTTATTTCCTGTTCCCATAACTaGACTGCCTTATCTAGCCTC +
Preference number: 2 (lower is better)
Translates to: YSLHLESPVQNSFHKLLISCSHN*TALSSL
Trigger: GAGGCTAGATAAGGCAGTCCAGTTATGGGAACAGGA...AATAAGGAGCTTGTGGAAACTGTTTTGGACAGGGGATTCTAAATGCAGGGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR TCA 90 bp TATTCCCTGCATTTAGAATCCCCTGTCCAAAACAGTTTCCACAAGCTCCTTATTAATAGGGGCTATTTCTaGATCTGTTTCCTGCCTGAG +
Preference number: 2 (lower is better)
Translates to: YSLHLESPVQNSFHKLLINRGYF*ICFLPE
Trigger: CTCAGGCAGGAAACAGATTCAGAAATAGCCCCTATT...AATAAGGAGCTTGTGGAAACTGTTTTGGACAGGGGATTCTAAATGCAGGGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR TCA 90 bp TATTCCCTGCATTTAGAATCCCCTGTCCAAAACAGTTTCCACAAGCTCCTTATTAGGCTTGCCATAACATaGATATCTGTCTTCCACTGC +
Preference number: 2 (lower is better)
Translates to: YSLHLESPVQNSFHKLLIRLAIT*ISVFHC
Trigger: GCAGTGGAAGACAGATATTCATGTTATGGCAAGCCT...AATAAGGAGCTTGTGGAAACTGTTTTGGACAGGGGATTCTAAATGCAGGGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR GCA 90 bp GTGTTAAAGGATCAAAGACCTCACCCAAGATTGATTCCACACAATCTTGCTTTATCTGAATCTGTTTCCTaGCTGAGGATCCTGTTCCCA +
Preference number: 2 (lower is better)
Translates to: VLKDQRPHPRLIPHNLALSESVS*LRILFP
Trigger: TGGGAACAGGATCCTCAGGCAGGAAACAGATTCAGA...TAAAGCAAGATTGTGTGGAATCAATCTTGGGTGAGGTCTTTGATCCTTTAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR CCA 90 bp ATATTCCCTGCATTTAGAATCCCCTGTCCAAAACAGTTTCCACAAGCTCCTTATAATTGTGGGGAAGAATaGGGAAACTCTCCCAATGTC +
Preference number: 2 (lower is better)
Translates to: IFPAFRIPCPKQFPQAPYNCGEE*GNSPNV
Trigger: GACATTGGGAGAGTTTCCCCATTCTTCCCCACAATT...ATAAGGAGCTTGTGGAAACTGTTTTGGACAGGGGATTCTAAATGCAGGGAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR CCA 90 bp GTGTTAAAGGATCAAAGACCTCACCCAAGATTGATTCCACACAATCTTGCTTTATCCTGTTCCCATAACTaGACTGCCTTATCTAGCCTC +
Preference number: 2 (lower is better)
Translates to: VLKDQRPHPRLIPHNLALSCSHN*TALSSL
Trigger: GAGGCTAGATAAGGCAGTCCAGTTATGGGAACAGGA...TAAAGCAAGATTGTGTGGAATCAATCTTGGGTGAGGTCTTTGATCCTTTAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR CAA 90 bp AGATACAGAGAGACACTGCTAAACATTAAGCAGATCTCAGGAGTCTaGTGGAAGAGTTGGGTGAAGGATAAAAGACCAAAAGAGGGTATA +
Preference number: 2 (lower is better)
Translates to: RYRETLLNIKQISGV*WKSWVKDKRPKEGI
Trigger: TATACCCTCTTTTGGTCTTTTATCCTTCACCCAACTCTTCCACAAGACTCCTGAGATCTGCTTAATGTTTAGCAGTGTCTCTCTGTATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR TCA 90 bp CTGTGTTTTAACAGTGTTAAAGGATCAAAGACCTCACCCAAGATTGATTCCACAAATAGGGGCTATTTCTaGATCTGTTTCCTGCCTGAG +
Preference number: 2 (lower is better)
Translates to: LCFNSVKGSKTSPKIDSTNRGYF*ICFLPE
Trigger: CTCAGGCAGGAAACAGATTCAGAAATAGCCCCTATT...TGTGGAATCAATCTTGGGTGAGGTCTTTGATCCTTTAACACTGTTAAAACACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR TCA 90 bp CTGTGTTTTAACAGTGTTAAAGGATCAAAGACCTCACCCAAGATTGATTCCACACATGGCAAGGGTCTGTaGCTTTGTAAAGAAAGTCCA +
Preference number: 2 (lower is better)
Translates to: LCFNSVKGSKTSPKIDSTHGKGL*LCKESP
Trigger: TGGACTTTCTTTACAAAGTCACAGACCCTTGCCATG...TGTGGAATCAATCTTGGGTGAGGTCTTTGATCCTTTAACACTGTTAAAACACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR GCA 90 bp TGGTTTTCTGAATTTGAAGTATCATCAGAGGCTCATGTTCTAAGCACTTACTCTTCTGAATCTGTTTCCTaGCTGAGGATCCTGTTCCCA +
Preference number: 2 (lower is better)
Translates to: WFSEFEVSSEAHVLSTYSSESVS*LRILFP
Trigger: TGGGAACAGGATCCTCAGGCAGGAAACAGATTCAGA...AGAGTAAGTGCTTAGAACATGAGCCTCTGATGATACTTCAAATTCAGAAAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR GCA 90 bp ATATTCCCTGCATTTAGAATCCCCTGTCCAAAACAGTTTCCACAAGCTCCTTATGAGTGGCTGTTCAGCTaGTTTGCAATTTTACCACAA +
Preference number: 2 (lower is better)
Translates to: IFPAFRIPCPKQFPQAPYEWLFS*FAILPQ
Trigger: TTGTGGTAAAATTGCAAAGCAGCTGAACAGCCACTC...ATAAGGAGCTTGTGGAAACTGTTTTGGACAGGGGATTCTAAATGCAGGGAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR GCA 90 bp ATATTCCCTGCATTTAGAATCCCCTGTCCAAAACAGTTTCCACAAGCTCCTTATCTCTCTAATAGGTCATaGTGTTTTGAGGAGACAAGG +
Preference number: 2 (lower is better)
Translates to: IFPAFRIPCPKQFPQAPYLSNRS*CFEETR
Trigger: CCTTGTCTCCTCAAAACAGCATGACCTATTAGAGAG...ATAAGGAGCTTGTGGAAACTGTTTTGGACAGGGGATTCTAAATGCAGGGAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR CCA 90 bp CTGTGTTTTAACAGTGTTAAAGGATCAAAGACCTCACCCAAGATTGATTCCACAAATTGTGGGGAAGAATaGGGAAACTCTCCCAATGTC +
Preference number: 2 (lower is better)
Translates to: LCFNSVKGSKTSPKIDSTNCGEE*GNSPNV
Trigger: GACATTGGGAGAGTTTCCCCATTCTTCCCCACAATT...TGTGGAATCAATCTTGGGTGAGGTCTTTGATCCTTTAACACTGTTAAAACACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR CCA 90 bp TATTCCCTGCATTTAGAATCCCCTGTCCAAAACAGTTTCCACAAGCTCCTTATTGTCTTGTGGAAGAGTTaGGTGAAGGATAAAAGACCA +
Preference number: 2 (lower is better)
Translates to: YSLHLESPVQNSFHKLLIVLWKS*VKDKRP
Trigger: TGGTCTTTTATCCTTCACCCAACTCTTCCACAAGAC...AATAAGGAGCTTGTGGAAACTGTTTTGGACAGGGGATTCTAAATGCAGGGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR CCA 90 bp GTGTTAAAGGATCAAAGACCTCACCCAAGATTGATTCCACACAATCTTGCTTTAAGCTGTTCATCTACATaGCAAGGGTCTGTGACTTTG +
Preference number: 2 (lower is better)
Translates to: VLKDQRPHPRLIPHNLALSCSST*QGSVTL
Trigger: CAAAGTCACAGACCCTTGCCATGTAGATGAACAGCT...TAAAGCAAGATTGTGTGGAATCAATCTTGGGTGAGGTCTTTGATCCTTTAACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR TCA 90 bp TGGTTTTCTGAATTTGAAGTATCATCAGAGGCTCATGTTCTAAGCACTTACTCTAGGCTTGCCATAACATaGATATCTGTCTTCCACTGC +
Preference number: 2 (lower is better)
Translates to: WFSEFEVSSEAHVLSTYSRLAIT*ISVFHC
Trigger: GCAGTGGAAGACAGATATTCATGTTATGGCAAGCCT...AGAGTAAGTGCTTAGAACATGAGCCTCTGATGATACTTCAAATTCAGAAAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR CCA 90 bp TGGTTTTCTGAATTTGAAGTATCATCAGAGGCTCATGTTCTAAGCACTTACTCTAGCTGTTCATCTACATaGCAAGGGTCTGTGACTTTG +
Preference number: 2 (lower is better)
Translates to: WFSEFEVSSEAHVLSTYSSCSST*QGSVTL
Trigger: CAAAGTCACAGACCCTTGCCATGTAGATGAACAGCT...AGAGTAAGTGCTTAGAACATGAGCCTCTGATGATACTTCAAATTCAGAAAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR GCA 90 bp TGGTTTTCTGAATTTGAAGTATCATCAGAGGCTCATGTTCTAAGCACTTACTCTGAGTGGCTGTTCAGCTaGTTTGCAATTTTACCACAA +
Preference number: 2 (lower is better)
Translates to: WFSEFEVSSEAHVLSTYSEWLFS*FAILPQ
Trigger: TTGTGGTAAAATTGCAAAGCAGCTGAACAGCCACTC...AGAGTAAGTGCTTAGAACATGAGCCTCTGATGATACTTCAAATTCAGAAAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR GCA 90 bp TGGTTTTCTGAATTTGAAGTATCATCAGAGGCTCATGTTCTAAGCACTTACTCTCATCTAGGGGATGTATaGCATGCATTTATTAACGCG +
Preference number: 2 (lower is better)
Translates to: WFSEFEVSSEAHVLSTYSHLGDV*HAFINA
Trigger: CGCGTTAATAAATGCATGGCATACATCCCCTAGATG...AGAGTAAGTGCTTAGAACATGAGCCTCTGATGATACTTCAAATTCAGAAAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR CCA 90 bp CTGTGTTTTAACAGTGTTAAAGGATCAAAGACCTCACCCAAGATTGATTCCACATTCCGTGATATTCCATaGCAGCCTCAACTTCTAATT +
Preference number: 2 (lower is better)
Translates to: LCFNSVKGSKTSPKIDSTFRDIP*QPQLLI
Trigger: AATTAGAAGTTGAGGCTGCCATGGAATATCACGGAA...TGTGGAATCAATCTTGGGTGAGGTCTTTGATCCTTTAACACTGTTAAAACACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR TCA 90 bp TGGTTTTCTGAATTTGAAGTATCATCAGAGGCTCATGTTCTAAGCACTTACTCTGAGAGAACTTATTCCTaGAATTTGTTCTCTGACCTC +
Preference number: 2 (lower is better)
Translates to: WFSEFEVSSEAHVLSTYSERTYS*NLFSDL
Trigger: GAGGTCAGAGAACAAATTTCAGGAATAAGTTCTCTC...AGAGTAAGTGCTTAGAACATGAGCCTCTGATGATACTTCAAATTCAGAAAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR CCA 90 bp TGGTTTTCTGAATTTGAAGTATCATCAGAGGCTCATGTTCTAAGCACTTACTCTTTCCGTGATATTCCATaGCAGCCTCAACTTCTAATT +
Preference number: 2 (lower is better)
Translates to: WFSEFEVSSEAHVLSTYSFRDIP*QPQLLI
Trigger: AATTAGAAGTTGAGGCTGCCATGGAATATCACGGAA...AGAGTAAGTGCTTAGAACATGAGCCTCTGATGATACTTCAAATTCAGAAAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR CCA 90 bp ATATTCCCTGCATTTAGAATCCCCTGTCCAAAACAGTTTCCACAAGCTCCTTATATGATCATGGTCCATTaGCTATTATGTGATAGTGAT +
Preference number: 2 (lower is better)
Translates to: IFPAFRIPCPKQFPQAPYMIMVH*LLCDSD
Trigger: ATCACTATCACATAATAGCCAATGGACCATGATCAT...ATAAGGAGCTTGTGGAAACTGTTTTGGACAGGGGATTCTAAATGCAGGGAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR GCA 90 bp TGGTTTTCTGAATTTGAAGTATCATCAGAGGCTCATGTTCTAAGCACTTACTCTGCTGTTCAGCTGCTTTaGAATTTTACCACAAATGTT +
Preference number: 2 (lower is better)
Translates to: WFSEFEVSSEAHVLSTYSAVQLL*NFTTNV
Trigger: AACATTTGTGGTAAAATTGCAAAGCAGCTGAACAGC...AGAGTAAGTGCTTAGAACATGAGCCTCTGATGATACTTCAAATTCAGAAAACCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR GCA 90 bp TGGTTTTCTGAATTTGAAGTATCATCAGAGGCTCATGTTCTAAGCACTTACTCTGATTCCACACAATCTTaGTTTAAATCTCTCCTAACA +
Preference number: 2 (lower is better)
Translates to: WFSEFEVSSEAHVLSTYSDSTQS*FKSLLT
Trigger: TGTTAGGAGAGATTTAAAGCAAGATTGTGTGGAATC...AGAGTAAGTGCTTAGAACATGAGCCTCTGATGATACTTCAAATTCAGAAAACCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR CCA 90 bp TGGTTTTCTGAATTTGAAGTATCATCAGAGGCTCATGTTCTAAGCACTTACTCTATGATCATGGTCCATTaGCTATTATGTGATAGTGAT +
Preference number: 2 (lower is better)
Translates to: WFSEFEVSSEAHVLSTYSMIMVH*LLCDSD
Trigger: ATCACTATCACATAATAGCCAATGGACCATGATCAT...AGAGTAAGTGCTTAGAACATGAGCCTCTGATGATACTTCAAATTCAGAAAACCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR TCA 72 bp ATCTGTCTTCCACTGCACAGTGCCATTATTGTGAACTaGGCTGCACCCGTCACATCCTTCCTGCCAAGATGG +
Preference number: 3 (lower is better)
Translates to: ICLPLHSAIIVN*AAPVTSFLPRW
Trigger: CCATCTTGGCAGGAAGGATGTGACGGGTGCAGCTCAGTTCACAATAATGGCACTGTGCAGTGGAAGACAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR CAA 90 bp ACTTACTCTCTAATAGGTCATGCTGTTTTGAGGAGACAAGGGAATTGTAGAAGGCAGTCTTACAGTGACTaGATGTGCCAGGGTAGGATG +
Preference number: 3 (lower is better)
Translates to: TYSLIGHAVLRRQGNCRRQSYSD*MCQGRM
Trigger: CATCCTACCCTGGCACATCAAGTCACTGTAAGACTG...CCTTCTACAATTCCCTTGTCTCCTCAAAACAGCATGACCTATTAGAGAGTAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR CAA 90 bp ACTTACTCTCTAATAGGTCATGCTGTTTTGAGGAGACAAGGGAATTGTAGAAGGCAGATCTCAGGAGTCTaGTGGAAGAGTTGGGTGAAG +
Preference number: 3 (lower is better)
Translates to: TYSLIGHAVLRRQGNCRRQISGV*WKSWVK
Trigger: CTTCACCCAACTCTTCCACAAGACTCCTGAGATCTG...CCTTCTACAATTCCCTTGTCTCCTCAAAACAGCATGACCTATTAGAGAGTAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR TCA 72 bp TTCGGTCCTTTCTCTGCTTCTAGGCTTGCCATAACATaGATATCTGTCTTCCACTGCACAGTGCCATTATTG +
Preference number: 3 (lower is better)
Translates to: FGPFSASRLAIT*ISVFHCTVPLL
Trigger: CAATAATGGCACTGTGCAGTGGAAGACAGATATTCATGTTATGGCAAGCCTAGAAGCAGAGAAAGGACCGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR CAA 90 bp GTGTTAAAGGATCAAAGACCTCACCCAAGATTGATTCCACACAATCTTGCTTTACAGTCTTACAGTGACTaGATGTGCCAGGGTAGGATG +
Preference number: 3 (lower is better)
Translates to: VLKDQRPHPRLIPHNLALQSYSD*MCQGRM
Trigger: CATCCTACCCTGGCACATCAAGTCACTGTAAGACTG...TAAAGCAAGATTGTGTGGAATCAATCTTGGGTGAGGTCTTTGATCCTTTAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR TCA 72 bp ATGGGGAAACTCTCCCAATGTCATGGTGTTAACCACTaGGGATTTAAGACCTATCATATGAATCCCATGGTT +
Preference number: 3 (lower is better)
Translates to: MGKLSQCHGVNH*GFKTYHMNPMV
Trigger: AACCATGGGATTCATATGATAGGTCTTAAATCCTCAGTGGTTAACACCATGACATTGGGAGAGTTTCCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR GCA 72 bp TCAAAGACCTCACCCAAGATTGATTCCACACAATCTTaGTTTAAATCTCTCCTAACAACCTGTTTCCCCAAC +
Preference number: 3 (lower is better)
Translates to: SKTSPKIDSTQS*FKSLLTTCFPN
Trigger: GTTGGGGAAACAGGTTGTTAGGAGAGATTTAAAGCAAGATTGTGTGGAATCAATCTTGGGTGAGGTCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR CCA 72 bp ACACTGCTAAACATTAAGCAGATCTCAGGAGTCTTGTaGAAGAGTTGGGTGAAGGATAAAAGACCAAAAGAG +
Preference number: 3 (lower is better)
Translates to: TLLNIKQISGVL*KSWVKDKRPKE
Trigger: CTCTTTTGGTCTTTTATCCTTCACCCAACTCTTCCACAAGACTCCTGAGATCTGCTTAATGTTTAGCAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR CCA 72 bp CCCTCTGAAACTATAAGCCAAAATAAGACAGGTTACTaGGTAAAGGTAGTTGTTGCTAAGACTGAAGGCATG +
Preference number: 3 (lower is better)
Translates to: PSETISQNKTGY*VKVVVAKTEGM
Trigger: CATGCCTTCAGTCTTAGCAACAACTACCTTTACCCAGTAACCTGTCTTATTTTGGCTTATAGTTTCAGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR CAA 90 bp TATTCCCTGCATTTAGAATCCCCTGTCCAAAACAGTTTCCACAAGCTCCTTATTGGAGAGGGGCTGAGATaGGGATGTAAAATGAATAAA +
Preference number: 3 (lower is better)
Translates to: YSLHLESPVQNSFHKLLIGEGLR*GCKMNK
Trigger: TTTATTCATTTTACATCCCAATCTCAGCCCCTCTCC...AATAAGGAGCTTGTGGAAACTGTTTTGGACAGGGGATTCTAAATGCAGGGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR CAA 90 bp ATATTCCCTGCATTTAGAATCCCCTGTCCAAAACAGTTTCCACAAGCTCCTTATGGCTGTTCAGCTGCTTaGCAATTTTACCACAAATGT +
Preference number: 3 (lower is better)
Translates to: IFPAFRIPCPKQFPQAPYGCSAA*QFYHKC
Trigger: ACATTTGTGGTAAAATTGCAAAGCAGCTGAACAGCC...ATAAGGAGCTTGTGGAAACTGTTTTGGACAGGGGATTCTAAATGCAGGGAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR CAA 90 bp GTGTTAAAGGATCAAAGACCTCACCCAAGATTGATTCCACACAATCTTGCTTTAGTGTCACCGTCATTTTaGTCAGAATTGAGTCACTCT +
Preference number: 3 (lower is better)
Translates to: VLKDQRPHPRLIPHNLALVSPSF*SELSHS
Trigger: AGAGTGACTCAATTCTGACAAAAATGACGGTGACAC...TAAAGCAAGATTGTGTGGAATCAATCTTGGGTGAGGTCTTTGATCCTTTAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR CAA 90 bp TATTCCCTGCATTTAGAATCCCCTGTCCAAAACAGTTTCCACAAGCTCCTTATTACATATGCTGTAGGATaGCACATATGCACAAATACC +
Preference number: 3 (lower is better)
Translates to: YSLHLESPVQNSFHKLLITYAVG*HICTNT
Trigger: GGTATTTGTGCATATGTGCAATCCTACAGCATATGT...AATAAGGAGCTTGTGGAAACTGTTTTGGACAGGGGATTCTAAATGCAGGGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR CCA 72 bp AACATTAAGCAGATCTCAGGAGTCTTGTGGAAGAGTTaGGTGAAGGATAAAAGACCAAAAGAGGGTATAGAA +
Preference number: 3 (lower is better)
Translates to: NIKQISGVLWKS*VKDKRPKEGIE
Trigger: TTCTATACCCTCTTTTGGTCTTTTATCCTTCACCCAACTCTTCCACAAGACTCCTGAGATCTGCTTAATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR CAA 90 bp TGGTTTTCTGAATTTGAAGTATCATCAGAGGCTCATGTTCTAAGCACTTACTCTGGAGAGGGGCTGAGATaGGGATGTAAAATGAATAAA +
Preference number: 3 (lower is better)
Translates to: WFSEFEVSSEAHVLSTYSGEGLR*GCKMNK
Trigger: TTTATTCATTTTACATCCCAATCTCAGCCCCTCTCC...AGAGTAAGTGCTTAGAACATGAGCCTCTGATGATACTTCAAATTCAGAAAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR CAA 90 bp TGGTTTTCTGAATTTGAAGTATCATCAGAGGCTCATGTTCTAAGCACTTACTCTGGCTGTTCAGCTGCTTaGCAATTTTACCACAAATGT +
Preference number: 3 (lower is better)
Translates to: WFSEFEVSSEAHVLSTYSGCSAA*QFYHKC
Trigger: ACATTTGTGGTAAAATTGCAAAGCAGCTGAACAGCC...AGAGTAAGTGCTTAGAACATGAGCCTCTGATGATACTTCAAATTCAGAAAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR CAA 90 bp TGGTTTTCTGAATTTGAAGTATCATCAGAGGCTCATGTTCTAAGCACTTACTCTGTGTCACCGTCATTTTaGTCAGAATTGAGTCACTCT +
Preference number: 3 (lower is better)
Translates to: WFSEFEVSSEAHVLSTYSVSPSF*SELSHS
Trigger: AGAGTGACTCAATTCTGACAAAAATGACGGTGACAC...AGAGTAAGTGCTTAGAACATGAGCCTCTGATGATACTTCAAATTCAGAAAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR-3UTR CAA 90 bp TGGTTTTCTGAATTTGAAGTATCATCAGAGGCTCATGTTCTAAGCACTTACTCTATAGGTCATGCTGTTTaGAGGAGACAAGGGAATTGT +
Preference number: 3 (lower is better)
Translates to: WFSEFEVSSEAHVLSTYSIGHAV*RRQGNC
Trigger: ACAATTCCCTTGTCTCCTCAAAACAGCATGACCTAT...AGAGTAAGTGCTTAGAACATGAGCCTCTGATGATACTTCAAATTCAGAAAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
3UTR GCA 72 bp TCTGACCTCCACACATATGCTGTAGGATTGCACATATaGACAAATACCTATACATACATAATACATACATAC +
Preference number: 3 (lower is better)
Translates to: SDLHTYAVGLHI*TNTYTYIIHTY
Trigger: GTATGTATGTATTATGTATGTATAGGTATTTGTGCATATGTGCAATCCTACAGCATATGTGTGGAGGTCAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
CDS-3UTR GCA 90 bp ACTTACTCTCTAATAGGTCATGCTGTTTTGAGGAGACAAGGGAATTGTAGAAGGTGCTGCAGTTCAGGGTaGTGGGATTTGGGGGCCATG +
Preference number: 4 (lower is better)
Translates to: TYSLIGHAVLRRQGNCRRCCSSG*WDLGAM
Trigger: CATGGCCCCCAAATCCCAGCACCCTGAACTGCAGCA...CCTTCTACAATTCCCTTGTCTCCTCAAAACAGCATGACCTATTAGAGAGTAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
CDS-3UTR CCA 90 bp TATTCCCTGCATTTAGAATCCCCTGTCCAAAACAGTTTCCACAAGCTCCTTATTTGCAGTTCAGGGTGCTaGGATTTGGGGGCCATGTAC +
Preference number: 4 (lower is better)
Translates to: YSLHLESPVQNSFHKLLICSSGC*DLGAMY
Trigger: GTACATGGCCCCCAAATCCCAGCACCCTGAACTGCA...AATAAGGAGCTTGTGGAAACTGTTTTGGACAGGGGATTCTAAATGCAGGGAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
CDS-3UTR TCA 90 bp CATGAATATCTGTCTTCCACTGCACAGTGCCATTATTGTGAACTGAGCTGCACCATCAGGCACTCTATGTaGGCAAAAGCCAGATACAAG +
Preference number: 4 (lower is better)
Translates to: HEYLSSTAQCHYCELSCTIRHSM*AKARYK
Trigger: CTTGTATCTGGCTTTTGCTCACATAGAGTGCCTGAT...GGTGCAGCTCAGTTCACAATAATGGCACTGTGCAGTGGAAGACAGATATTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
CDS-3UTR CCA 90 bp CTGTGTTTTAACAGTGTTAAAGGATCAAAGACCTCACCCAAGATTGATTCCACATGCAGTTCAGGGTGCTaGGATTTGGGGGCCATGTAC +
Preference number: 4 (lower is better)
Translates to: LCFNSVKGSKTSPKIDSTCSSGC*DLGAMY
Trigger: GTACATGGCCCCCAAATCCCAGCACCCTGAACTGCA...TGTGGAATCAATCTTGGGTGAGGTCTTTGATCCTTTAACACTGTTAAAACACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
CDS-3UTR TCA 90 bp CATGAATATCTGTCTTCCACTGCACAGTGCCATTATTGTGAACTGAGCTGCACCGCAAAGATAACAACTTaGTTGAGTGTTGTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: HEYLSSTAQCHYCELSCTAKITT*LSVVSA
Trigger: TGCTGACACAACACTCAATCAAGTTGTTATCTTTGC...GGTGCAGCTCAGTTCACAATAATGGCACTGTGCAGTGGAAGACAGATATTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
CDS-3UTR TCA 90 bp ATATTCCCTGCATTTAGAATCCCCTGTCCAAAACAGTTTCCACAAGCTCCTTATAGATTATTCCAAAGATaGTTCCATTCCCCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: IFPAFRIPCPKQFPQAPYRLFQR*FHSPEG
Trigger: CCCTTCTGGGGAATGGAATCATCTTTGGAATAATCT...ATAAGGAGCTTGTGGAAACTGTTTTGGACAGGGGATTCTAAATGCAGGGAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
CDS-3UTR TCA 90 bp TATTCCCTGCATTTAGAATCCCCTGTCCAAAACAGTTTCCACAAGCTCCTTATTAGATTATTCCAAAGATaGTTCCATTCCCCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: YSLHLESPVQNSFHKLLIRLFQR*FHSPEG
Trigger: CCCTTCTGGGGAATGGAATCATCTTTGGAATAATCT...AATAAGGAGCTTGTGGAAACTGTTTTGGACAGGGGATTCTAAATGCAGGGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
CDS-3UTR TCA 90 bp CTGTGTTTTAACAGTGTTAAAGGATCAAAGACCTCACCCAAGATTGATTCCACAGAGATGGTTCTTCTTTaGGTCACAAGATTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: LCFNSVKGSKTSPKIDSTEMVLL*VTRFAS
Trigger: GCTGGCAAATCTTGTGACTCAAAGAAGAACCATCTC...TGTGGAATCAATCTTGGGTGAGGTCTTTGATCCTTTAACACTGTTAAAACACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
CDS-3UTR TCA 90 bp GTGTTAAAGGATCAAAGACCTCACCCAAGATTGATTCCACACAATCTTGCTTTAGAGATGGTTCTTCTTTaGGTCACAAGATTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: VLKDQRPHPRLIPHNLALEMVLL*VTRFAS
Trigger: GCTGGCAAATCTTGTGACTCAAAGAAGAACCATCTC...TAAAGCAAGATTGTGTGGAATCAATCTTGGGTGAGGTCTTTGATCCTTTAACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
CDS-3UTR CCA 90 bp ACTTACTCTCTAATAGGTCATGCTGTTTTGAGGAGACAAGGGAATTGTAGAAGGGATTTGCCAGCATCTTaGGGACATTATTGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: TYSLIGHAVLRRQGNCRRDLPAS*GHYWKH
Trigger: ATGCTTCCAATAATGTCCCCAAGATGCTGGCAAATC...CCTTCTACAATTCCCTTGTCTCCTCAAAACAGCATGACCTATTAGAGAGTAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
CDS-3UTR TCA 90 bp TATTCCCTGCATTTAGAATCCCCTGTCCAAAACAGTTTCCACAAGCTCCTTATTGCAAAGATAACAACTTaGTTGAGTGTTGTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: YSLHLESPVQNSFHKLLIAKITT*LSVVSA
Trigger: TGCTGACACAACACTCAATCAAGTTGTTATCTTTGC...AATAAGGAGCTTGTGGAAACTGTTTTGGACAGGGGATTCTAAATGCAGGGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
CDS-3UTR CCA 90 bp GTGTTAAAGGATCAAAGACCTCACCCAAGATTGATTCCACACAATCTTGCTTTAGATTTGCCAGCATCTTaGGGACATTATTGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: VLKDQRPHPRLIPHNLALDLPAS*GHYWKH
Trigger: ATGCTTCCAATAATGTCCCCAAGATGCTGGCAAATC...TAAAGCAAGATTGTGTGGAATCAATCTTGGGTGAGGTCTTTGATCCTTTAACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
CDS-3UTR CAA 90 bp CATGAATATCTGTCTTCCACTGCACAGTGCCATTATTGTGAACTGAGCTGCACCCAGGGAAAGGATCTTTaGCTGCAGTTCAGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: HEYLSSTAQCHYCELSCTQGKDL*LQFRVL
Trigger: CAGCACCCTGAACTGCAGCAAAAGATCCTTTCCCTG...GGTGCAGCTCAGTTCACAATAATGGCACTGTGCAGTGGAAGACAGATATTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
CDS-3UTR CAA 90 bp GTGTTAAAGGATCAAAGACCTCACCCAAGATTGATTCCACACAATCTTGCTTTACAGGGAAAGGATCTTTaGCTGCAGTTCAGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: VLKDQRPHPRLIPHNLALQGKDL*LQFRVL
Trigger: CAGCACCCTGAACTGCAGCAAAAGATCCTTTCCCTG...TAAAGCAAGATTGTGTGGAATCAATCTTGGGTGAGGTCTTTGATCCTTTAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
CDS-3UTR CAA 90 bp TATTCCCTGCATTTAGAATCCCCTGTCCAAAACAGTTTCCACAAGCTCCTTATTTTTGAGTCACAAGATTaGCCAGCATCTTGGGGACAT +
Preference number: 5 (lower is better)
Translates to: YSLHLESPVQNSFHKLLIFESQD*PASWGH
Trigger: ATGTCCCCAAGATGCTGGCAAATCTTGTGACTCAAA...AATAAGGAGCTTGTGGAAACTGTTTTGGACAGGGGATTCTAAATGCAGGGAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2
CDS-3UTR CAA 90 bp GTGTTAAAGGATCAAAGACCTCACCCAAGATTGATTCCACACAATCTTGCTTTATTTGAGTCACAAGATTaGCCAGCATCTTGGGGACAT +
Preference number: 5 (lower is better)
Translates to: VLKDQRPHPRLIPHNLALFESQD*PASWGH
Trigger: ATGTCCCCAAGATGCTGGCAAATCTTGTGACTCAAA...TAAAGCAAGATTGTGTGGAATCAATCTTGGGTGAGGTCTTTGATCCTTTAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215911.2
ENSMUST00000216411.2