Pregenerated sensors for OLFR228 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000111772

Ensembl transcript IDs: ENSMUST00000217292.3

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR CCA 90 bp	GTAAATGCCATAGAAAGAGTTAAGTCATCTAACACACACACACACACACACACAGTGCTTGATTATTACTaGAACCTTCACATCAATGGG	+
Preference number: 2 (lower is better) Translates to: VNAIERVKSSNTHTHTHTVLDYY*NLHING Trigger: CCCATTGATGTGAAGGTTCCAGTAATAATCAAGCAC...TGTGTGTGTGTGTGTGTGTGTGTTAGATGACTTAACTCTTTCTATGGCATTTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217292.3
3UTR-3UTR TCA 90 bp	GTAAATGCCATAGAAAGAGTTAAGTCATCTAACACACACACACACACACACACAATAAATACACAGCCATaGGTAAACACCAGAGAACTT	+
Preference number: 2 (lower is better) Translates to: VNAIERVKSSNTHTHTHTINTQP*VNTREL Trigger: AAGTTCTCTGGTGTTTACTCATGGCTGTGTATTTAT...TGTGTGTGTGTGTGTGTGTGTGTTAGATGACTTAACTCTTTCTATGGCATTTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217292.3
CDS-3UTR GCA 90 bp	GTAAATGCCATAGAAAGAGTTAAGTCATCTAACACACACACACACACACACACACCAAACAATGGAGCCTaGAGCTCAGGGCAGTCAGTG	+
Preference number: 4 (lower is better) Translates to: VNAIERVKSSNTHTHTHTPNNGA*SSGQSV Trigger: CACTGACTGCCCTGAGCTGCAGGCTCCATTGTTTGG...TGTGTGTGTGTGTGTGTGTGTGTTAGATGACTTAACTCTTTCTATGGCATTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217292.3
CDS-3UTR GCA 90 bp	GTAAATGCCATAGAAAGAGTTAAGTCATCTAACACACACACACACACACACACAAAAAAGCCTTCTGCCTaGCTTCAGCAGAGTTCATCC	+
Preference number: 4 (lower is better) Translates to: VNAIERVKSSNTHTHTHTKKPSA*LQQSSS Trigger: GGATGAACTCTGCTGAAGGCAGGCAGAAGGCTTTTT...TGTGTGTGTGTGTGTGTGTGTGTTAGATGACTTAACTCTTTCTATGGCATTTAC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000217292.3
CDS-3UTR CCA 90 bp	GTAAATGCCATAGAAAGAGTTAAGTCATCTAACACACACACACACACACACACATGTAAATGTAAGGAATaGCCACTAGAACCCAACACA	+
Preference number: 4 (lower is better) Translates to: VNAIERVKSSNTHTHTHTCKCKE*PLEPNT Trigger: TGTGTTGGGTTCTAGTGGCCATTCCTTACATTTACA...TGTGTGTGTGTGTGTGTGTGTGTTAGATGACTTAACTCTTTCTATGGCATTTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217292.3
CDS-3UTR TCA 90 bp	GTAAATGCCATAGAAAGAGTTAAGTCATCTAACACACACACACACACACACACACCAACACACTCTTTGTaGCATAATGACATTATAGAG	+
Preference number: 4 (lower is better) Translates to: VNAIERVKSSNTHTHTHTPTHSL*HNDIIE Trigger: CTCTATAATGTCATTATGTCACAAAGAGTGTGTTGG...TGTGTGTGTGTGTGTGTGTGTGTTAGATGACTTAACTCTTTCTATGGCATTTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217292.3
CDS-3UTR CCA 90 bp	GTAAATGCCATAGAAAGAGTTAAGTCATCTAACACACACACACACACACACACAGACATTATAGAGGAGTaGTTTACAAATGGCGACATA	+
Preference number: 4 (lower is better) Translates to: VNAIERVKSSNTHTHTHTDIIEE*FTNGDI Trigger: TATGTCGCCATTTGTAAACCACTCCTCTATAATGTC...TGTGTGTGTGTGTGTGTGTGTGTTAGATGACTTAACTCTTTCTATGGCATTTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217292.3
CDS-3UTR CAA 90 bp	GTAAATGCCATAGAAAGAGTTAAGTCATCTAACACACACACACACACACACACAAAGATAGAAGCCACCTaGTCAGTTTTTAAGGAGTCA	+
Preference number: 5 (lower is better) Translates to: VNAIERVKSSNTHTHTHTKIEAT*SVFKES Trigger: TGACTCCTTAAAAACTGACAAGGTGGCTTCTATCTT...TGTGTGTGTGTGTGTGTGTGTGTTAGATGACTTAACTCTTTCTATGGCATTTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217292.3