Pregenerated sensors for OLFR225 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044061Ensembl transcript IDs: ENSMUST00000055276.6, ENSMUST00000213169.2
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGCGGCAAGCTTTGTCACCCACTCATTACTGAGACGTAGAGAGTaGCGAGGTCAAGTGCTTGCCTGGGGTAGGCAAGGCCCTGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: LAASFVTHSLLRRRE*RGQVLAWGRQGPGF Trigger: GAAGCCAGGGCCTTGCCTACCCCAGGCAAGCACTTGACCTCGGCACTCTCTACGTCTCAGTAATGAGTGGGTGACAAAGCTTGCCGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| 3UTR CCA 90 bp | CACTCATTACTGAGACGTAGAGAGTGCCGAGGTCAAGTGCTTGCCTaGGGTAGGCAAGGCCCTGGCTTCCATGCCAGCCCCGCAAAAGTC | + |
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Preference number: 1 (lower is better) Translates to: HSLLRRRECRGQVLA*GRQGPGFHASPAKV Trigger: GACTTTTGCGGGGCTGGCATGGAAGCCAGGGCCTTGCCTACCCCAGGCAAGCACTTGACCTCGGCACTCTCTACGTCTCAGTAATGAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| 3UTR TCA 90 bp | ACAGTTAAGTCCGTTTGTGCGGGGACAGGGAGGAGGGTTGGCTGGTaGCCATCAGAGGACATGGGAATGTTTGCTCCACAGGGTGGAGCA | + |
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Preference number: 1 (lower is better) Translates to: TVKSVCAGTGRRVGW*PSEDMGMFAPQGGA Trigger: TGCTCCACCCTGTGGAGCAAACATTCCCATGTCCTCTGATGGTCACCAGCCAACCCTCCTCCCTGTCCCCGCACAAACGGACTTAACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| 3UTR GCA 90 bp | AGGGAGGAGGGTTGGCTGGTGACCATCAGAGGACATGGGAATGTTTaGTCCACAGGGTGGAGCAATAGAGCTGGAAAACTGAGACAGCTT | + |
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Preference number: 1 (lower is better) Translates to: REEGWLVTIRGHGNV*STGWSNRAGKLRQL Trigger: AAGCTGTCTCAGTTTTCCAGCTCTATTGCTCCACCCTGTGGAGCAAACATTCCCATGTCCTCTGATGGTCACCAGCCAACCCTCCTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| 3UTR TCA 90 bp | ATCCTTAAAGTTTCGGTGCCCAGTCTTTCTCTGATGCAGAAGGCCTaGTTGATCCATCGGGAGCGATCCATCGGGAGCTGGTTCTACGAG | + |
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Preference number: 1 (lower is better) Translates to: ILKVSVPSLSLMQKA*LIHRERSIGSWFYE Trigger: CTCGTAGAACCAGCTCCCGATGGATCGCTCCCGATGGATCAATCAGGCCTTCTGCATCAGAGAAAGACTGGGCACCGAAACTTTAAGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| 3UTR-3UTR GCA 90 bp | TTGATCCATCGGGAGCGATCCATCGGGAGCTGGTTCTACGAGAACTCTAGAGCAAGGCCCTGGCTTCCATaGCAGCCCCGCAAAAGTCTA | + |
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Preference number: 2 (lower is better) Translates to: LIHRERSIGSWFYENSRARPWLP*QPRKSL Trigger: TAGACTTTTGCGGGGCTGGCATGGAAGCCAGGGCCT...TGCTCTAGAGTTCTCGTAGAACCAGCTCCCGATGGATCGCTCCCGATGGATCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| 3UTR-3UTR CCA 90 bp | ATATTTGCAATCCCAGCACTTGGGAGACAAGGAGGGGCGCTGGGCTACAGAGATGACAGGGAGGAGGGTTaGCTGGTGACCATCAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: IFAIPALGRQGGALGYRDDREEG*LVTIRG Trigger: TCCTCTGATGGTCACCAGCCAACCCTCCTCCCTGTC...ATCTCTGTAGCCCAGCGCCCCTCCTTGTCTCCCAAGTGCTGGGATTGCAAATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| 3UTR-3UTR GCA 90 bp | CAGTCTTTCTCTGATGCAGAAGGCCTGATTGATCCATCGGGAGCGATCCATCGGCTGAGACGTAGAGAGTaGCGAGGTCAAGTGCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: QSFSDAEGLIDPSGAIHRLRRRE*RGQVLA Trigger: GGCAAGCACTTGACCTCGGCACTCTCTACGTCTCAG...CCGATGGATCGCTCCCGATGGATCAATCAGGCCTTCTGCATCAGAGAAAGACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| 3UTR CAA 90 bp | TTAGTTAAACAGTTAAGTCCGTTTGTGCGGGGACAGGGAGGAGGGTaGGCTGGTGACCATCAGAGGACATGGGAATGTTTGCTCCACAGG | + |
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Preference number: 2 (lower is better) Translates to: LVKQLSPFVRGQGGG*AGDHQRTWECLLHR Trigger: CCTGTGGAGCAAACATTCCCATGTCCTCTGATGGTCACCAGCCAACCCTCCTCCCTGTCCCCGCACAAACGGACTTAACTGTTTAACTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| 3UTR-3UTR GCA 90 bp | CAGTCTTTCTCTGATGCAGAAGGCCTGATTGATCCATCGGGAGCGATCCATCGGCATTCTGTCAGACGGTaGCTCCTTCCTCTTGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: QSFSDAEGLIDPSGAIHRHSVRR*LLPLVS Trigger: AGACACAAGAGGAAGGAGGCACCGTCTGACAGAATG...CCGATGGATCGCTCCCGATGGATCAATCAGGCCTTCTGCATCAGAGAAAGACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| 3UTR-3UTR CCA 90 bp | CGCACACATTCTGTCAGACGGTGCCTCCTTCCTCTTGTGTCTGAACAGCATCACTGGGTCCGAAACACATaGACAAGTGAGGTGAGTTCC | + |
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Preference number: 2 (lower is better) Translates to: RTHSVRRCLLPLVSEQHHWVRNT*TSEVSS Trigger: GGAACTCACCTCACTTGTCCATGTGTTTCGGACCCA...GTGATGCTGTTCAGACACAAGAGGAAGGAGGCACCGTCTGACAGAATGTGTGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| 3UTR-3UTR GCA 90 bp | CACTTGGGAGACAAGGAGGGGCGCTGGGCTACAGAGATCGTGCCTCAAGAACAAGTGCTACTTTTGAAATaGTTGCTACATTCACTAAAC | + |
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Preference number: 2 (lower is better) Translates to: HLGDKEGRWATEIVPQEQVLLLK*LLHSLN Trigger: GTTTAGTGAATGTAGCAAGCATTTCAAAAGTAGCAC...TTGTTCTTGAGGCACGATCTCTGTAGCCCAGCGCCCCTCCTTGTCTCCCAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| 3UTR-3UTR CCA 90 bp | ATATTTGCAATCCCAGCACTTGGGAGACAAGGAGGGGCGCTGGGCTACAGAGATCATCGTTGCCACCTTTaGCTTATTGTCACTATGATT | + |
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Preference number: 2 (lower is better) Translates to: IFAIPALGRQGGALGYRDHRCHL*LIVTMI Trigger: AATCATAGTGACAATAAGCCAAAGGTGGCAACGATG...ATCTCTGTAGCCCAGCGCCCCTCCTTGTCTCCCAAGTGCTGGGATTGCAAATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| 3UTR TCA 72 bp | TCCGTTTGTGCGGGGACAGGGAGGAGGGTTGGCTGGTaGCCATCAGAGGACATGGGAATGTTTGCTCCACAG | + |
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Preference number: 3 (lower is better) Translates to: SVCAGTGRRVGW*PSEDMGMFAPQ Trigger: CTGTGGAGCAAACATTCCCATGTCCTCTGATGGTCACCAGCCAACCCTCCTCCCTGTCCCCGCACAAACGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| 3UTR TCA 72 bp | GTTTCGGTGCCCAGTCTTTCTCTGATGCAGAAGGCCTaGTTGATCCATCGGGAGCGATCCATCGGGAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: VSVPSLSLMQKA*LIHRERSIGSW Trigger: CCAGCTCCCGATGGATCGCTCCCGATGGATCAATCAGGCCTTCTGCATCAGAGAAAGACTGGGCACCGAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| 3UTR GCA 72 bp | AGCTTTGTCACCCACTCATTACTGAGACGTAGAGAGTaGCGAGGTCAAGTGCTTGCCTGGGGTAGGCAAGGC | + |
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Preference number: 3 (lower is better) Translates to: SFVTHSLLRRRE*RGQVLAWGRQG Trigger: GCCTTGCCTACCCCAGGCAAGCACTTGACCTCGGCACTCTCTACGTCTCAGTAATGAGTGGGTGACAAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| 3UTR CCA 72 bp | TTGCAATCCCAGCACTTGGGAGACAAGGAGGGGCGCTaGGCTACAGAGATCGTGCCTCAAGAACAAGAGAAA | + |
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Preference number: 3 (lower is better) Translates to: LQSQHLGDKEGR*ATEIVPQEQEK Trigger: TTTCTCTTGTTCTTGAGGCACGATCTCTGTAGCCCAGCGCCCCTCCTTGTCTCCCAAGTGCTGGGATTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| 3UTR TCA 72 bp | CTTGGTTCATTCTCACTAGTCCTCCTCCATAAGCAGTaGTGGCCTTGCTCCCTAGACACTCCCTGCCATCCT | + |
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Preference number: 3 (lower is better) Translates to: LGSFSLVLLHKQ*WPCSLDTPCHP Trigger: AGGATGGCAGGGAGTGTCTAGGGAGCAAGGCCATCACTGCTTATGGAGGAGGACTAGTGAGAATGAACCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| 3UTR GCA 72 bp | GGTTGGCTGGTGACCATCAGAGGACATGGGAATGTTTaGTCCACAGGGTGGAGCAATAGAGCTGGAAAACTG | + |
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Preference number: 3 (lower is better) Translates to: GWLVTIRGHGNV*STGWSNRAGKL Trigger: CAGTTTTCCAGCTCTATTGCTCCACCCTGTGGAGCAAACATTCCCATGTCCTCTGATGGTCACCAGCCAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| 3UTR CCA 72 bp | GAACATGGTAATCCAAATATTTGCAATCCCAGCACTTaGGAGACAAGGAGGGGCGCTGGGCTACAGAGATCG | + |
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Preference number: 3 (lower is better) Translates to: EHGNPNICNPST*ETRRGAGLQRS Trigger: CGATCTCTGTAGCCCAGCGCCCCTCCTTGTCTCCCAAGTGCTGGGATTGCAAATATTTGGATTACCATGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| 3UTR TCA 72 bp | TGGAGGCCCTTCCCTGCAGACAGTAATATACATCACTaGTCTGGGACCTATGGGATACAAGACACCACATCG | + |
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Preference number: 3 (lower is better) Translates to: WRPFPADSNIHH*SGTYGIQDTTS Trigger: CGATGTGGTGTCTTGTATCCCATAGGTCCCAGATCAGTGATGTATATTACTGTCTGCAGGGAAGGGCCTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| 3UTR-3UTR CAA 90 bp | CATGGGAATGTTTGCTCCACAGGGTGGAGCAATAGAGCTGGAAAACTGAGACAGAGAAGTCCTATCTCCTaGAATAAAATGGAGGCCCTT | + |
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Preference number: 3 (lower is better) Translates to: HGNVCSTGWSNRAGKLRQRSPIS*NKMEAL Trigger: AAGGGCCTCCATTTTATTCAAGGAGATAGGACTTCT...CTGTCTCAGTTTTCCAGCTCTATTGCTCCACCCTGTGGAGCAAACATTCCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| 3UTR GCA 72 bp | AACAAAAACGAAGCTGAACATGGTAATCCAAATATTTaGAATCCCAGCACTTGGGAGACAAGGAGGGGCGCT | + |
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Preference number: 3 (lower is better) Translates to: NKNEAEHGNPNI*NPSTWETRRGA Trigger: AGCGCCCCTCCTTGTCTCCCAAGTGCTGGGATTGCAAATATTTGGATTACCATGTTCAGCTTCGTTTTTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| 3UTR CCA 72 bp | TTGCCACCTTTGGCTTATTGTCACTATGATTCACTATaGGTCCGAAACACATGGACAAGTGAGGTGAGTTCC | + |
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Preference number: 3 (lower is better) Translates to: LPPLAYCHYDSL*VRNTWTSEVSS Trigger: GGAACTCACCTCACTTGTCCATGTGTTTCGGACCCATAGTGAATCATAGTGACAATAAGCCAAAGGTGGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| CDS-3UTR CCA 90 bp | CACTTGGGAGACAAGGAGGGGCGCTGGGCTACAGAGATCGTGCCTCAAGAACAAATCTCCAGCCGGGGCTaGTCAGAGAAGCCCAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: HLGDKEGRWATEIVPQEQISSRG*SEKPRR Trigger: TCTCCTGGGCTTCTCTGACCAGCCCCGGCTGGAGAT...TTGTTCTTGAGGCACGATCTCTGTAGCCCAGCGCCCCTCCTTGTCTCCCAAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| CDS-3UTR CCA 90 bp | TTGATCCATCGGGAGCGATCCATCGGGAGCTGGTTCTACGAGAACTCTAGAGCAACATCAGTGTCGAGCTaGCTGTGCCACCGAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LIHRERSIGSWFYENSRATSVSS*LCHRAR Trigger: CCTGGCTCGGTGGCACAGCCAGCTCGACACTGATGT...TGCTCTAGAGTTCTCGTAGAACCAGCTCCCGATGGATCGCTCCCGATGGATCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| 3UTR CAA 72 bp | CAGTTAAGTCCGTTTGTGCGGGGACAGGGAGGAGGGTaGGCTGGTGACCATCAGAGGACATGGGAATGTTTG | + |
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Preference number: 4 (lower is better) Translates to: QLSPFVRGQGGG*AGDHQRTWECL Trigger: CAAACATTCCCATGTCCTCTGATGGTCACCAGCCAACCCTCCTCCCTGTCCCCGCACAAACGGACTTAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| CDS-3UTR GCA 90 bp | CACTTGGGAGACAAGGAGGGGCGCTGGGCTACAGAGATCGTGCCTCAAGAACAAGGGGGATGCTACTGGTaGTGTAACAGAGGTCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: HLGDKEGRWATEIVPQEQGGCYW*CNRGQE Trigger: TTCTTGACCTCTGTTACAGCACCAGTAGCATCCCCC...TTGTTCTTGAGGCACGATCTCTGTAGCCCAGCGCCCCTCCTTGTCTCCCAAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| CDS-3UTR GCA 90 bp | CACTTGGGAGACAAGGAGGGGCGCTGGGCTACAGAGATCGTGCCTCAAGAACAACCTGGCTTGCCAAATTaGCAGGCTGCATGTACATGT | + |
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Preference number: 4 (lower is better) Translates to: HLGDKEGRWATEIVPQEQPGLPN*QAACTC Trigger: ACATGTACATGCAGCCTGGCAATTTGGCAAGCCAGG...TTGTTCTTGAGGCACGATCTCTGTAGCCCAGCGCCCCTCCTTGTCTCCCAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| CDS-3UTR GCA 90 bp | CATGGGAATGTTTGCTCCACAGGGTGGAGCAATAGAGCTGGAAAACTGAGACAGGCCCTGGTCCTGGCTTaGCAAATTGCCAGGCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: HGNVCSTGWSNRAGKLRQALVLA*QIARLH Trigger: ATGCAGCCTGGCAATTTGGCAAGCCAGGACCAGGGC...CTGTCTCAGTTTTCCAGCTCTATTGCTCCACCCTGTGGAGCAAACATTCCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| CDS-3UTR TCA 90 bp | ATATTTGCAATCCCAGCACTTGGGAGACAAGGAGGGGCGCTGGGCTACAGAGATAGGAAGGCAAAGAGCTaGACAGCACATCCTACGAAG | + |
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Preference number: 4 (lower is better) Translates to: IFAIPALGRQGGALGYRDRKAKS*TAHPTK Trigger: CTTCGTAGGATGTGCTGTTCAGCTCTTTGCCTTCCT...ATCTCTGTAGCCCAGCGCCCCTCCTTGTCTCCCAAGTGCTGGGATTGCAAATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| CDS-3UTR GCA 90 bp | AGACAGCTTTCTATGGGAGAGAGCAAGTGTTCCCATTACTTCTCTGACACACAGGGAGAATGCACTCGATaGCCCCCACGGACAGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: RQLSMGESKCSHYFSDTQGECTR*PPRTGR Trigger: CCTTCCTGTCCGTGGGGGGCATCGAGTGCATTCTCC...CTGTGTGTCAGAGAAGTAATGGGAACACTTGCTCTCTCCCATAGAAAGCTGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| CDS-3UTR GCA 90 bp | CCACATCGTTGCCACCTTTGGCTTATTGTCACTATGATTCACTATGGGTCCGAAGAGCCAGGCAAAGGCTaGCAGCTTCAGGCACAGCTG | + |
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Preference number: 4 (lower is better) Translates to: PHRCHLWLIVTMIHYGSEEPGKG*QLQAQL Trigger: CAGCTGTGCCTGAAGCTGGCAGCCTTTGCCTGGCTC...TTCGGACCCATAGTGAATCATAGTGACAATAAGCCAAAGGTGGCAACGATGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| CDS-3UTR CCA 90 bp | AGACAGCTTTCTATGGGAGAGAGCAAGTGTTCCCATTACTTCTCTGACACACAGACCGCCCCAGAGACATaGTCAGTGGGGACATCAGTG | + |
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Preference number: 4 (lower is better) Translates to: RQLSMGESKCSHYFSDTQTAPET*SVGTSV Trigger: CACTGATGTCCCCACTGACCATGTCTCTGGGGCGGT...CTGTGTGTCAGAGAAGTAATGGGAACACTTGCTCTCTCCCATAGAAAGCTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| CDS-3UTR CCA 90 bp | CAGTCTTTCTCTGATGCAGAAGGCCTGATTGATCCATCGGGAGCGATCCATCGGGTTAGAAACTTGCCCTaGTCCTGGCTTGCCAAATTG | + |
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Preference number: 4 (lower is better) Translates to: QSFSDAEGLIDPSGAIHRVRNLP*SWLAKL Trigger: CAATTTGGCAAGCCAGGACCAGGGCAAGTTTCTAAC...CCGATGGATCGCTCCCGATGGATCAATCAGGCCTTCTGCATCAGAGAAAGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| CDS-3UTR TCA 90 bp | CATGGGAATGTTTGCTCCACAGGGTGGAGCAATAGAGCTGGAAAACTGAGACAGGTCGTAGGCCATAACTaGCAGGAGAATGCACTCGAT | + |
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Preference number: 4 (lower is better) Translates to: HGNVCSTGWSNRAGKLRQVVGHN*QENALD Trigger: ATCGAGTGCATTCTCCTGTCAGTTATGGCCTACGAC...CTGTCTCAGTTTTCCAGCTCTATTGCTCCACCCTGTGGAGCAAACATTCCCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| CDS-3UTR GCA 90 bp | CATGGGAATGTTTGCTCCACAGGGTGGAGCAATAGAGCTGGAAAACTGAGACAGACAGAGTTAGAAACTTaGCCTGGTCCTGGCTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: HGNVCSTGWSNRAGKLRQTELET*PGPGLP Trigger: TGGCAAGCCAGGACCAGGGCAAGTTTCTAACTCTGT...CTGTCTCAGTTTTCCAGCTCTATTGCTCCACCCTGTGGAGCAAACATTCCCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| CDS-3UTR CCA 90 bp | CCACATCGTTGCCACCTTTGGCTTATTGTCACTATGATTCACTATGGGTCCGAAAACTTGCCCTGGTCCTaGCTTGCCAAATTGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: PHRCHLWLIVTMIHYGSENLPWS*LAKLPG Trigger: GCCTGGCAATTTGGCAAGCCAGGACCAGGGCAAGTT...TTCGGACCCATAGTGAATCATAGTGACAATAAGCCAAAGGTGGCAACGATGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| CDS-3UTR CCA 90 bp | CCTTCCCTGCAGACAGTAATATACATCACTGATCTGGGACCTATGGGATACAAGCAGAGACATGGTCAGTaGGGACATCAGTGTCGAGCT | + |
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Preference number: 4 (lower is better) Translates to: PSLQTVIYITDLGPMGYKQRHGQ*GHQCRA Trigger: AGCTCGACACTGATGTCCCCACTGACCATGTCTCTG...CTTGTATCCCATAGGTCCCAGATCAGTGATGTATATTACTGTCTGCAGGGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| CDS-3UTR CCA 90 bp | CCACATCGTTGCCACCTTTGGCTTATTGTCACTATGATTCACTATGGGTCCGAATCCACACAGGAGATGTaGATGATAGCCGGCATCTCG | + |
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Preference number: 4 (lower is better) Translates to: PHRCHLWLIVTMIHYGSESTQEM*MIAGIS Trigger: CGAGATGCCGGCTATCATCCACATCTCCTGTGTGGA...TTCGGACCCATAGTGAATCATAGTGACAATAAGCCAAAGGTGGCAACGATGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| CDS-3UTR TCA 90 bp | CAGTCTTTCTCTGATGCAGAAGGCCTGATTGATCCATCGGGAGCGATCCATCGGGCATGTACATGTAGATaGTGCTACTGTAGAAAAGAG | + |
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Preference number: 4 (lower is better) Translates to: QSFSDAEGLIDPSGAIHRACTCR*CYCRKE Trigger: CTCTTTTCTACAGTAGCATCATCTACATGTACATGC...CCGATGGATCGCTCCCGATGGATCAATCAGGCCTTCTGCATCAGAGAAAGACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| CDS-3UTR TCA 90 bp | AAGACACCACATCGTTGCCACCTTTGGCTTATTGTCACTATGATTCACTATGGGTGGCTGAGTTGCCTGTaGCAGCTAGAAAATAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: KTPHRCHLWLIVTMIHYGWLSCL*QLENKR Trigger: TCTTTTATTTTCTAGCTGTCACAGGCAACTCAGCCA...CCCATAGTGAATCATAGTGACAATAAGCCAAAGGTGGCAACGATGTGGTGTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| CDS CCA 90 bp | GTGGTTGATACGGCGATGACCACACCGCCCCAGAGACATGGTCAGTaGGGACATCAGTGTCGAGCTGGCTGTGCCACCGAGCCAGGCAAA | + |
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Preference number: 5 (lower is better) Translates to: VVDTAMTTPPQRHGQ*GHQCRAGCATEPGK Trigger: TTTGCCTGGCTCGGTGGCACAGCCAGCTCGACACTGATGTCCCCACTGACCATGTCTCTGGGGCGGTGTGGTCATCGCCGTATCAACCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055276.6 ENSMUST00000213169.2 |
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| CDS GCA 90 bp | GGACATCAGTGTCGAGCTGGCTGTGCCACCGAGCCAGGCAAAGGCTaGCAGCTTCAGGCACAGCTGTGGGTGCATGATGGTCAGGTAATG | + |
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Preference number: 5 (lower is better) Translates to: GHQCRAGCATEPGKG*QLQAQLWVHDGQVM Trigger: CATTACCTGACCATCATGCACCCACAGCTGTGCCTGAAGCTGGCAGCCTTTGCCTGGCTCGGTGGCACAGCCAGCTCGACACTGATGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055276.6 ENSMUST00000213169.2 |
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| CDS-3UTR CAA 90 bp | TTTGCAATCCCAGCACTTGGGAGACAAGGAGGGGCGCTGGGCTACAGAGATCGTTGCCCTGGTCCTGGCTaGCCAAATTGCCAGGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: FAIPALGRQGGALGYRDRCPGPG*PNCQAA Trigger: TGCAGCCTGGCAATTTGGCAAGCCAGGACCAGGGCA...ACGATCTCTGTAGCCCAGCGCCCCTCCTTGTCTCCCAAGTGCTGGGATTGCAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| CDS TCA 90 bp | TGGATGATAGCCGGCATCTCGCACACAAAGTGGTTGATACGGCGATaGCCACACCGCCCCAGAGACATGGTCAGTGGGGACATCAGTGTC | + |
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Preference number: 5 (lower is better) Translates to: WMIAGISHTKWLIRR*PHRPRDMVSGDISV Trigger: GACACTGATGTCCCCACTGACCATGTCTCTGGGGCGGTGTGGTCATCGCCGTATCAACCACTTTGTGTGCGAGATGCCGGCTATCATCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055276.6 ENSMUST00000213169.2 |
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| CDS GCA 90 bp | GTCCGAAACACATGGACAAGTGAGGTGAGTTCCAGGTCCTGTCAGTaGCCTGCGGGTCGAGCAGGTTTCTATCTTTTCCCAGAACCTTCA | + |
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Preference number: 5 (lower is better) Translates to: VRNTWTSEVSSRSCQ*PAGRAGFYLFPEPS Trigger: TGAAGGTTCTGGGAAAAGATAGAAACCTGCTCGACCCGCAGGGCACTGACAGGACCTGGAACTCACCTCACTTGTCCATGTGTTTCGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055276.6 |
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| CDS-3UTR CAA 90 bp | TTGATCCATCGGGAGCGATCCATCGGGAGCTGGTTCTACGAGAACTCTAGAGCATCCTGGCTTGCCAAATaGCCAGGCTGCATGTACATG | + |
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Preference number: 5 (lower is better) Translates to: LIHRERSIGSWFYENSRASWLAK*PGCMYM Trigger: CATGTACATGCAGCCTGGCAATTTGGCAAGCCAGGA...TGCTCTAGAGTTCTCGTAGAACCAGCTCCCGATGGATCGCTCCCGATGGATCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| CDS-3UTR CAA 90 bp | GGAGAGAGCAAGTGTTCCCATTACTTCTCTGACACACAGGCACATGCGCACACAAACAGAGTTAGAAACTaGCCCTGGTCCTGGCTTGCC | + |
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Preference number: 5 (lower is better) Translates to: GESKCSHYFSDTQAHAHTNRVRN*PWSWLA Trigger: GGCAAGCCAGGACCAGGGCAAGTTTCTAACTCTGTT...TGTGTGCGCATGTGCCTGTGTGTCAGAGAAGTAATGGGAACACTTGCTCTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| CDS-3UTR CAA 90 bp | CGCACACATTCTGTCAGACGGTGCCTCCTTCCTCTTGTGTCTGAACAGCATCACAAGATGATGGCTGAGTaGCCTGTGACAGCTAGAAAA | + |
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Preference number: 5 (lower is better) Translates to: RTHSVRRCLLPLVSEQHHKMMAE*PVTARK Trigger: TTTTCTAGCTGTCACAGGCAACTCAGCCATCATCTT...GTGATGCTGTTCAGACACAAGAGGAAGGAGGCACCGTCTGACAGAATGTGTGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| CDS CCA 90 bp | ATGAAAATTAGGCCTTCTATCCAGCTTGTGTCCACACAGGAGATGTaGATGATAGCCGGCATCTCGCACACAAAGTGGTTGATACGGCGA | + |
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Preference number: 5 (lower is better) Translates to: MKIRPSIQLVSTQEM*MIAGISHTKWLIRR Trigger: TCGCCGTATCAACCACTTTGTGTGCGAGATGCCGGCTATCATCCACATCTCCTGTGTGGACACAAGCTGGATAGAAGGCCTAATTTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055276.6 ENSMUST00000213169.2 |
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| CDS-3UTR CAA 90 bp | AAGACACCACATCGTTGCCACCTTTGGCTTATTGTCACTATGATTCACTATGGGGGCCTTCTATCCAGCTaGTGTCCACACAGGAGATGT | + |
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Preference number: 5 (lower is better) Translates to: KTPHRCHLWLIVTMIHYGGLLSS*CPHRRC Trigger: ACATCTCCTGTGTGGACACAAGCTGGATAGAAGGCC...CCCATAGTGAATCATAGTGACAATAAGCCAAAGGTGGCAACGATGTGGTGTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213169.2 |
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| CDS CCA 72 bp | ACGGCGATGACCACACCGCCCCAGAGACATGGTCAGTaGGGACATCAGTGTCGAGCTGGCTGTGCCACCGAG | + |
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Preference number: 6 (lower is better) Translates to: TAMTTPPQRHGQ*GHQCRAGCATE Trigger: CTCGGTGGCACAGCCAGCTCGACACTGATGTCCCCACTGACCATGTCTCTGGGGCGGTGTGGTCATCGCCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055276.6 ENSMUST00000213169.2 |
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| CDS GCA 72 bp | TGTCGAGCTGGCTGTGCCACCGAGCCAGGCAAAGGCTaGCAGCTTCAGGCACAGCTGTGGGTGCATGATGGT | + |
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Preference number: 6 (lower is better) Translates to: CRAGCATEPGKG*QLQAQLWVHDG Trigger: ACCATCATGCACCCACAGCTGTGCCTGAAGCTGGCAGCCTTTGCCTGGCTCGGTGGCACAGCCAGCTCGACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055276.6 ENSMUST00000213169.2 |
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| CDS TCA 72 bp | GCCGGCATCTCGCACACAAAGTGGTTGATACGGCGATaGCCACACCGCCCCAGAGACATGGTCAGTGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: AGISHTKWLIRR*PHRPRDMVSGD Trigger: GTCCCCACTGACCATGTCTCTGGGGCGGTGTGGTCATCGCCGTATCAACCACTTTGTGTGCGAGATGCCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055276.6 ENSMUST00000213169.2 |
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| CDS TCA 72 bp | ATTCACTATGGGTCCGAAACACATGGACAAGTGAGGTaGGTTCCAGGTCCTGTCAGTGCCCTGCGGGTCGAG | + |
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Preference number: 6 (lower is better) Translates to: IHYGSETHGQVR*VPGPVSALRVE Trigger: CTCGACCCGCAGGGCACTGACAGGACCTGGAACTCACCTCACTTGTCCATGTGTTTCGGACCCATAGTGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055276.6 |
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| CDS GCA 72 bp | ACATGGACAAGTGAGGTGAGTTCCAGGTCCTGTCAGTaGCCTGCGGGTCGAGCAGGTTTCTATCTTTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: TWTSEVSSRSCQ*PAGRAGFYLFP Trigger: TGGGAAAAGATAGAAACCTGCTCGACCCGCAGGGCACTGACAGGACCTGGAACTCACCTCACTTGTCCATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055276.6 |
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| CDS CCA 72 bp | AGGCCTTCTATCCAGCTTGTGTCCACACAGGAGATGTaGATGATAGCCGGCATCTCGCACACAAAGTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: RPSIQLVSTQEM*MIAGISHTKWL Trigger: CAACCACTTTGTGTGCGAGATGCCGGCTATCATCCACATCTCCTGTGTGGACACAAGCTGGATAGAAGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055276.6 ENSMUST00000213169.2 |
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