Pregenerated sensors for OLFR222 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059610Ensembl transcript IDs: ENSMUST00000071943.6, ENSMUST00000214351.2, ENSMUST00000215339.2
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TTTCCTACAGCCCTAGGGGTTGAACTCAGTCCTTCCCACATGCCAAGGAAGTGCCCCCAGAGTCCTTGCTaGGGAGTTCTGCCAGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: FPTALGVELSPSHMPRKCPQSPC*GVLPEV Trigger: CACCTCTGGCAGAACTCCGCAGCAAGGACTCTGGGG...GCACTTCCTTGGCATGTGGGAAGGACTGAGTTCAACCCCTAGGGCTGTAGGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| 3UTR-3UTR TCA 90 bp | CTGAGAATGGAACTTAACGCTCAGATGCGGGACTTTGAGCCTCATCACCACACGTACAGCCCTAGGGGTTaGACTCAGTCCTTCCCACAT | + |
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Preference number: 2 (lower is better) Translates to: LRMELNAQMRDFEPHHHTYSPRG*TQSFPH Trigger: ATGTGGGAAGGACTGAGTTCAACCCCTAGGGCTGTA...CGTGTGGTGATGAGGCTCAAAGTCCCGCATCTGAGCGTTAAGTTCCATTCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| 3UTR-3UTR GCA 90 bp | GTAATGGAAGAAAGGGGTTTAAAAAGATACATGGGAAACGAGAGAGGAAATACACCCCAGAGTCCTTGCTaGGGAGTTCTGCCAGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: VMEERGLKRYMGNERGNTPQSPC*GVLPEV Trigger: CACCTCTGGCAGAACTCCGCAGCAAGGACTCTGGGG...TGTATTTCCTCTCTCGTTTCCCATGTATCTTTTTAAACCCCTTTCTTCCATTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| 3UTR-3UTR GCA 90 bp | AATCTCTCAAAGAACCTACTGTTCCAAGAATTTCCTACAGCCCTAGGGGTTGAATCAGTCCTTCCCACATaGCAAGGAAGTGCTGTACCA | + |
|
Preference number: 2 (lower is better) Translates to: NLSKNLLFQEFPTALGVESVLPT*QGSAVP Trigger: TGGTACAGCACTTCCTTGGCATGTGGGAAGGACTGA...TTCAACCCCTAGGGCTGTAGGAAATTCTTGGAACAGTAGGTTCTTTGAGAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| 3UTR-3UTR TCA 90 bp | GACTGTAATGGAAGAAAGGGGTTTAAAAAGATACATGGGAAACGAGAGAGGAAATACAGCCCTAGGGGTTaGACTCAGTCCTTCCCACAT | + |
|
Preference number: 2 (lower is better) Translates to: DCNGRKGFKKIHGKRERKYSPRG*TQSFPH Trigger: ATGTGGGAAGGACTGAGTTCAACCCCTAGGGCTGTA...TTTCCTCTCTCGTTTCCCATGTATCTTTTTAAACCCCTTTCTTCCATTACAGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| 3UTR-3UTR GCA 90 bp | ATTTTGATCCACGAAGAACAGACGTTTATTATAAACGAGGTAAGACTCTGTGTCTCAGTCCTTCCCACATaGCAAGGAAGTGCTGTACCA | + |
|
Preference number: 2 (lower is better) Translates to: ILIHEEQTFIINEVRLCVSVLPT*QGSAVP Trigger: TGGTACAGCACTTCCTTGGCATGTGGGAAGGACTGA...GACACAGAGTCTTACCTCGTTTATAATAAACGTCTGTTCTTCGTGGATCAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| 3UTR-3UTR TCA 90 bp | AATGGAAGAAAGGGGTTTAAAAAGATACATGGGAAACGAGAGAGGAAATACAGGTCACCACACGGAAGGTaGAATGCTTTTGGATGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: NGRKGFKKIHGKRERKYRSPHGR*NAFGCF Trigger: AAAACATCCAAAAGCATTTCACCTTCCGTGTGGTGA...CCTGTATTTCCTCTCTCGTTTCCCATGTATCTTTTTAAACCCCTTTCTTCCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| 3UTR-3UTR CCA 90 bp | GACTGTAATGGAAGAAAGGGGTTTAAAAAGATACATGGGAAACGAGAGAGGAAACTTCTTGAAGATATATaGCTTCTTAGAACTGTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: DCNGRKGFKKIHGKRERKLLEDI*LLRTVL Trigger: GAGCACAGTTCTAAGAAGCCATATATCTTCAAGAAG...TTTCCTCTCTCGTTTCCCATGTATCTTTTTAAACCCCTTTCTTCCATTACAGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| 3UTR TCA 72 bp | CCTACTGTTCCAAGAATTTCCTACAGCCCTAGGGGTTaGACTCAGTCCTTCCCACATGCCAAGGAAGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PTVPRISYSPRG*TQSFPHAKEVL Trigger: CAGCACTTCCTTGGCATGTGGGAAGGACTGAGTTCAACCCCTAGGGCTGTAGGAAATTCTTGGAACAGTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| 3UTR TCA 72 bp | CTTCTTGAAGATATATGGCTTCTTAGAACTGTGCTCTaGGAATGGAACTTAACGCTCAGATGCGGGACTTTG | + |
|
Preference number: 3 (lower is better) Translates to: LLEDIWLLRTVL*EWNLTLRCGTL Trigger: CAAAGTCCCGCATCTGAGCGTTAAGTTCCATTCTCAGAGCACAGTTCTAAGAAGCCATATATCTTCAAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS-3UTR GCA 90 bp | CTGAGAATGGAACTTAACGCTCAGATGCGGGACTTTGAGCCTCATCACCACACGGAACACCAGGAGGACTaGAAAGACTGGGAGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LRMELNAQMRDFEPHHHTEHQED*KDWELQ Trigger: CTGGAGCTCCCAGTCTTTGCAGTCCTCCTGGTGTTC...CGTGTGGTGATGAGGCTCAAAGTCCCGCATCTGAGCGTTAAGTTCCATTCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS-3UTR CCA 90 bp | CGGGACTTTGAGCCTCATCACCACACGGAAGGTGAAATGCTTTTGGATGTTTTTCCTTGTGCCGTCCCCTaGAGGACTGGATCCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: RDFEPHHHTEGEMLLDVFPCAVP*RTGSSS Trigger: TGATGAGGATCCAGTCCTCCAGGGGACGGCACAAGG...AAAAACATCCAAAAGCATTTCACCTTCCGTGTGGTGATGAGGCTCAAAGTCCCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS-3UTR CCA 90 bp | TGCGGGACTTTGAGCCTCATCACCACACGGAAGGTGAAATGCTTTTGGATGTTTGAGACCACCAACAGGTaGGAAGAGCAAGTCCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CGTLSLITTRKVKCFWMFETTNR*EEQVPK Trigger: CTTCGGGACTTGCTCTTCCCACCTGTTGGTGGTCTC...AAACATCCAAAAGCATTTCACCTTCCGTGTGGTGATGAGGCTCAAAGTCCCGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS-3UTR GCA 90 bp | GTAATGGAAGAAAGGGGTTTAAAAAGATACATGGGAAACGAGAGAGGAAATACAGTCCCGAAGGCCTTGTaGCGTCCCCTGGAGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: VMEERGLKRYMGNERGNTVPKAL*RPLEDW Trigger: CCAGTCCTCCAGGGGACGGCACAAGGCCTTCGGGAC...TGTATTTCCTCTCTCGTTTCCCATGTATCTTTTTAAACCCCTTTCTTCCATTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS-3UTR CCA 90 bp | AGAAAGGGGTTTAAAAAGATACATGGGAAACGAGAGAGGAAATACAGGAAGAGGATAGCCACGAGCTGCTaGCAGAGTGGGCGGTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: RKGFKKIHGKRERKYRKRIATSC*QSGRCM Trigger: CATGCACCGCCCACTCTGCCAGCAGCTCGTGGCTAT...CCTCTTCCTGTATTTCCTCTCTCGTTTCCCATGTATCTTTTTAAACCCCTTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS-3UTR CCA 90 bp | GAAAGGGGTTTAAAAAGATACATGGGAAACGAGAGAGGAAATACAGGAAGAGGAATAGCCACGAGCTGCTaGCAGAGTGGGCGGTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: ERGLKRYMGNERGNTGRGIATSC*QSGRCM Trigger: CATGCACCGCCCACTCTGCCAGCAGCTCGTGGCTAT...TCCTCTTCCTGTATTTCCTCTCTCGTTTCCCATGTATCTTTTTAAACCCCTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS-3UTR TCA 90 bp | GAGGTAAGACTCTGTGTCAAGTTCATTTTGTACACATCTGGAGTGACTGTAATGTGCAGCCACCGTAACTaGTGGTCTTCTGGGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EVRLCVKFILYTSGVTVMCSHRN*WSSGSS Trigger: GGAGCTCCCAGAAGACCATCAGTTACGGTGGCTGCA...CATTACAGTCACTCCAGATGTGTACAAAATGAACTTGACACAGAGTCTTACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS-3UTR GCA 90 bp | TTGTTTTCTTTCAAATCTCTCAAAGAACCTACTGTTCCAAGAATTTCCTACAGCGTCCCGAAGGCCTTGTaGCGTCCCCTGGAGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFSFKSLKEPTVPRISYSVPKAL*RPLEDW Trigger: CCAGTCCTCCAGGGGACGGCACAAGGCCTTCGGGAC...GCTGTAGGAAATTCTTGGAACAGTAGGTTCTTTGAGAGATTTGAAAGAAAACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS-3UTR CCA 90 bp | GAAAGGGGTTTAAAAAGATACATGGGAAACGAGAGAGGAAATACAGGAAGAGGAGAGGACTGCAAAGACTaGGAGCTCCAGCCATGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ERGLKRYMGNERGNTGRGEDCKD*ELQPWP Trigger: AGGCCATGGCTGGAGCTCCCAGTCTTTGCAGTCCTC...TCCTCTTCCTGTATTTCCTCTCTCGTTTCCCATGTATCTTTTTAAACCCCTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS-3UTR CCA 90 bp | GACTGTAATGGAAGAAAGGGGTTTAAAAAGATACATGGGAAACGAGAGAGGAAACGTCCCCTGGAGGACTaGATCCTCATCACTGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: DCNGRKGFKKIHGKRERKRPLED*ILITAR Trigger: TCGGGCAGTGATGAGGATCCAGTCCTCCAGGGGACG...TTTCCTCTCTCGTTTCCCATGTATCTTTTTAAACCCCTTTCTTCCATTACAGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS-3UTR CCA 90 bp | ACTCTGTGTCAAGTTCATTTTGTACACATCTGGAGTGACTGTAATGGAAGAAAGCGTCCCCTGGAGGACTaGATCCTCATCACTGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: TLCQVHFVHIWSDCNGRKRPLED*ILITAR Trigger: TCGGGCAGTGATGAGGATCCAGTCCTCCAGGGGACG...CTTTCTTCCATTACAGTCACTCCAGATGTGTACAAAATGAACTTGACACAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS-3UTR CCA 90 bp | AGAAAGGGGTTTAAAAAGATACATGGGAAACGAGAGAGGAAATACAGGAAGAGGCCTTGTGCCGTCCCCTaGAGGACTGGATCCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: RKGFKKIHGKRERKYRKRPCAVP*RTGSSS Trigger: TGATGAGGATCCAGTCCTCCAGGGGACGGCACAAGG...CCTCTTCCTGTATTTCCTCTCTCGTTTCCCATGTATCTTTTTAAACCCCTTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS-3UTR TCA 90 bp | GATCCACGAAGAACAGACGTTTATTATAAACGAGGTAAGACTCTGTGTCAAGTTTGCAGCCACCGTAACTaGTGGTCTTCTGGGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: DPRRTDVYYKRGKTLCQVCSHRN*WSSGSS Trigger: GGAGCTCCCAGAAGACCATCAGTTACGGTGGCTGCA...AACTTGACACAGAGTCTTACCTCGTTTATAATAAACGTCTGTTCTTCGTGGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS-3UTR CCA 90 bp | GAAAGGGGTTTAAAAAGATACATGGGAAACGAGAGAGGAAATACAGGAAGAGGACCAGCCAGTGGAAAATaGCGTATTGCACCGTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: ERGLKRYMGNERGNTGRGPASGK*RIAPCS Trigger: GCTGCACGGTGCAATACGCCATTTTCCACTGGCTGG...TCCTCTTCCTGTATTTCCTCTCTCGTTTCCCATGTATCTTTTTAAACCCCTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS-3UTR CCA 90 bp | CAAGTTCATTTTGTACACATCTGGAGTGACTGTAATGGAAGAAAGGGGTTTAAAAGCGGTCCAGAGCCATaGCCGCCAAGACAACGCACT | + |
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Preference number: 4 (lower is better) Translates to: QVHFVHIWSDCNGRKGFKSGPEP*PPRQRT Trigger: AGTGCGTTGTCTTGGCGGCCATGGCTCTGGACCGCT...TTTAAACCCCTTTCTTCCATTACAGTCACTCCAGATGTGTACAAAATGAACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS-3UTR GCA 90 bp | GACTGTAATGGAAGAAAGGGGTTTAAAAAGATACATGGGAAACGAGAGAGGAAAGAACACCAGGAGGACTaGAAAGACTGGGAGCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: DCNGRKGFKKIHGKRERKEHQED*KDWELQ Trigger: CTGGAGCTCCCAGTCTTTGCAGTCCTCCTGGTGTTC...TTTCCTCTCTCGTTTCCCATGTATCTTTTTAAACCCCTTTCTTCCATTACAGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS-3UTR CCA 90 bp | GTAATGGAAGAAAGGGGTTTAAAAAGATACATGGGAAACGAGAGAGGAAATACAGAGGACTGCAAAGACTaGGAGCTCCAGCCATGGCCT | + |
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Preference number: 4 (lower is better) Translates to: VMEERGLKRYMGNERGNTEDCKD*ELQPWP Trigger: AGGCCATGGCTGGAGCTCCCAGTCTTTGCAGTCCTC...TGTATTTCCTCTCTCGTTTCCCATGTATCTTTTTAAACCCCTTTCTTCCATTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS-3UTR CCA 90 bp | GATCCACGAAGAACAGACGTTTATTATAAACGAGGTAAGACTCTGTGTCAAGTTCCAGCCAGTGGAAAATaGCGTATTGCACCGTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: DPRRTDVYYKRGKTLCQVPASGK*RIAPCS Trigger: GCTGCACGGTGCAATACGCCATTTTCCACTGGCTGG...AACTTGACACAGAGTCTTACCTCGTTTATAATAAACGTCTGTTCTTCGTGGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS-3UTR CCA 90 bp | GATCCACGAAGAACAGACGTTTATTATAAACGAGGTAAGACTCTGTGTCAAGTTGTGCAGCCCAGCCAGTaGAAAATGGCGTATTGCACC | + |
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Preference number: 4 (lower is better) Translates to: DPRRTDVYYKRGKTLCQVVQPSQ*KMAYCT Trigger: GGTGCAATACGCCATTTTCCACTGGCTGGGCTGCAC...AACTTGACACAGAGTCTTACCTCGTTTATAATAAACGTCTGTTCTTCGTGGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS-3UTR CCA 90 bp | TTGTTTTCTTTCAAATCTCTCAAAGAACCTACTGTTCCAAGAATTTCCTACAGCAGCGGTCCAGAGCCATaGCCGCCAAGACAACGCACT | + |
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Preference number: 4 (lower is better) Translates to: LFSFKSLKEPTVPRISYSSGPEP*PPRQRT Trigger: AGTGCGTTGTCTTGGCGGCCATGGCTCTGGACCGCT...GCTGTAGGAAATTCTTGGAACAGTAGGTTCTTTGAGAGATTTGAAAGAAAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS-3UTR CCA 90 bp | ATTTTGATCCACGAAGAACAGACGTTTATTATAAACGAGGTAAGACTCTGTGTCGTGCAGCCCAGCCAGTaGAAAATGGCGTATTGCACC | + |
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Preference number: 4 (lower is better) Translates to: ILIHEEQTFIINEVRLCVVQPSQ*KMAYCT Trigger: GGTGCAATACGCCATTTTCCACTGGCTGGGCTGCAC...GACACAGAGTCTTACCTCGTTTATAATAAACGTCTGTTCTTCGTGGATCAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS-3UTR CCA 90 bp | ATTTTGATCCACGAAGAACAGACGTTTATTATAAACGAGGTAAGACTCTGTGTCGAGACCACCAACAGGTaGGAAGAGCAAGTCCCGAAG | + |
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Preference number: 4 (lower is better) Translates to: ILIHEEQTFIINEVRLCVETTNR*EEQVPK Trigger: CTTCGGGACTTGCTCTTCCCACCTGTTGGTGGTCTC...GACACAGAGTCTTACCTCGTTTATAATAAACGTCTGTTCTTCGTGGATCAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS-3UTR CCA 90 bp | AATGGAAGAAAGGGGTTTAAAAAGATACATGGGAAACGAGAGAGGAAATACAGGGCAGGTACATGTAAATaGCGGGCAGGTAGAAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: NGRKGFKKIHGKRERKYRAGTCK*RAGRRG Trigger: CCCTCTTCTACCTGCCCGCCATTTACATGTACCTGC...CCTGTATTTCCTCTCTCGTTTCCCATGTATCTTTTTAAACCCCTTTCTTCCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS-3UTR CCA 90 bp | CAAGTTCATTTTGTACACATCTGGAGTGACTGTAATGGAAGAAAGGGGTTTAAAGCAGGTACATGTAAATaGCGGGCAGGTAGAAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: QVHFVHIWSDCNGRKGFKAGTCK*RAGRRG Trigger: CCCTCTTCTACCTGCCCGCCATTTACATGTACCTGC...TTTAAACCCCTTTCTTCCATTACAGTCACTCCAGATGTGTACAAAATGAACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS-3UTR CCA 90 bp | TTGTTTTCTTTCAAATCTCTCAAAGAACCTACTGTTCCAAGAATTTCCTACAGCGAGGATAAAGTCCTTTaGGGTGTCCCAGAAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFSFKSLKEPTVPRISYSEDKVL*GVPEAA Trigger: AGCTGCTTCTGGGACACCCCAAAGGACTTTATCCTC...GCTGTAGGAAATTCTTGGAACAGTAGGTTCTTTGAGAGATTTGAAAGAAAACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| 3UTR CAA 72 bp | ATTATAAACGAGGTAAGACTCTGTGTCAAGTTCATTTaGTACACATCTGGAGTGACTGTAATGGAAGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: IINEVRLCVKFI*YTSGVTVMEER Trigger: CCTTTCTTCCATTACAGTCACTCCAGATGTGTACAAAATGAACTTGACACAGAGTCTTACCTCGTTTATAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS CCA 90 bp | GCCGAAGCCGCTGAGCCAGGCCATAGCCACGAGCTGCTGGCAGAGTaGGCGGTGCATGATGATAGCATAGCGGAGTGGCTCACAGATGGC | + |
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Preference number: 5 (lower is better) Translates to: AEAAEPGHSHELLAE*AVHDDSIAEWLTDG Trigger: GCCATCTGTGAGCCACTCCGCTATGCTATCATCATGCACCGCCCACTCTGCCAGCAGCTCGTGGCTATGGCCTGGCTCAGCGGCTTCGGC 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071943.6 ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS TCA 90 bp | AGCACCTGCCGGCCACAGAAAGGCAATTGCACTGTCAGGATGACCTaGACAAGGGAGTTGCCGAAGCCGCTGAGCCAGGCCATAGCCACG | + |
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Preference number: 5 (lower is better) Translates to: STCRPQKGNCTVRMT*TRELPKPLSQAIAT Trigger: CGTGGCTATGGCCTGGCTCAGCGGCTTCGGCAACTCCCTTGTTCAGGTCATCCTGACAGTGCAATTGCCTTTCTGTGGCCGGCAGGTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071943.6 ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS CCA 90 bp | CCCCAGCATAGCCAGAATGTAGAACACCAGGAGGACTGCAAAGACTaGGAGCTCCAGCCATGGCCTGTCGGAAATGCCCAGGAGGATAAA | + |
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Preference number: 5 (lower is better) Translates to: PQHSQNVEHQEDCKD*ELQPWPVGNAQEDK Trigger: TTTATCCTCCTGGGCATTTCCGACAGGCCATGGCTGGAGCTCCCAGTCTTTGCAGTCCTCCTGGTGTTCTACATTCTGGCTATGCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071943.6 ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS-3UTR CAA 90 bp | TTGTTTTCTTTCAAATCTCTCAAAGAACCTACTGTTCCAAGAATTTCCTACAGCCAAGTCCCGAAGGCCTaGTGCCGTCCCCTGGAGGAC | + |
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Preference number: 5 (lower is better) Translates to: LFSFKSLKEPTVPRISYSQVPKA*CRPLED Trigger: GTCCTCCAGGGGACGGCACAAGGCCTTCGGGACTTG...GCTGTAGGAAATTCTTGGAACAGTAGGTTCTTTGAGAGATTTGAAAGAAAACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS-3UTR CAA 90 bp | GTACACATCTGGAGTGACTGTAATGGAAGAAAGGGGTTTAAAAAGATACATGGGGCCACAGAAAGGCAATaGCACTGTCAGGATGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: VHIWSDCNGRKGFKKIHGATERQ*HCQDDL Trigger: CAGGTCATCCTGACAGTGCAATTGCCTTTCTGTGGC...CCCATGTATCTTTTTAAACCCCTTTCTTCCATTACAGTCACTCCAGATGTGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS-3UTR CAA 90 bp | GTAATGGAAGAAAGGGGTTTAAAAAGATACATGGGAAACGAGAGAGGAAATACAACCTCGCAGAAGAAGTaGTTCAGCACCTGCCGGCCA | + |
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Preference number: 5 (lower is better) Translates to: VMEERGLKRYMGNERGNTTSQKK*FSTCRP Trigger: TGGCCGGCAGGTGCTGAACAACTTCTTCTGCGAGGT...TGTATTTCCTCTCTCGTTTCCCATGTATCTTTTTAAACCCCTTTCTTCCATTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS-3UTR CAA 90 bp | ACTCTGTGTCAAGTTCATTTTGTACACATCTGGAGTGACTGTAATGGAAGAAAGGCCACAGAAAGGCAATaGCACTGTCAGGATGACCTG | + |
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Preference number: 5 (lower is better) Translates to: TLCQVHFVHIWSDCNGRKATERQ*HCQDDL Trigger: CAGGTCATCCTGACAGTGCAATTGCCTTTCTGTGGC...CTTTCTTCCATTACAGTCACTCCAGATGTGTACAAAATGAACTTGACACAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS-3UTR CAA 90 bp | TTGTTTTCTTTCAAATCTCTCAAAGAACCTACTGTTCCAAGAATTTCCTACAGCACCTCGCAGAAGAAGTaGTTCAGCACCTGCCGGCCA | + |
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Preference number: 5 (lower is better) Translates to: LFSFKSLKEPTVPRISYSTSQKK*FSTCRP Trigger: TGGCCGGCAGGTGCTGAACAACTTCTTCTGCGAGGT...GCTGTAGGAAATTCTTGGAACAGTAGGTTCTTTGAGAGATTTGAAAGAAAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS CCA 72 bp | GCTGAGCCAGGCCATAGCCACGAGCTGCTGGCAGAGTaGGCGGTGCATGATGATAGCATAGCGGAGTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: AEPGHSHELLAE*AVHDDSIAEWL Trigger: GAGCCACTCCGCTATGCTATCATCATGCACCGCCCACTCTGCCAGCAGCTCGTGGCTATGGCCTGGCTCAGC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071943.6 ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS CAA 72 bp | ACCACCAACAGGTGGGAAGAGCAAGTCCCGAAGGCCTaGTGCCGTCCCCTGGAGGACTGGATCCTCATCACT | + |
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Preference number: 6 (lower is better) Translates to: TTNRWEEQVPKA*CRPLEDWILIT Trigger: AGTGATGAGGATCCAGTCCTCCAGGGGACGGCACAAGGCCTTCGGGACTTGCTCTTCCCACCTGTTGGTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071943.6 ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS CCA 72 bp | CACCAGGAGGACTGCAAAGACTGGGAGCTCCAGCCATaGCCTGTCGGAAATGCCCAGGAGGATAAAGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: HQEDCKDWELQP*PVGNAQEDKVL Trigger: AAGGACTTTATCCTCCTGGGCATTTCCGACAGGCCATGGCTGGAGCTCCCAGTCTTTGCAGTCCTCCTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071943.6 ENSMUST00000214351.2 ENSMUST00000215339.2 |
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| CDS CCA 72 bp | TGGCCTGTCGGAAATGCCCAGGAGGATAAAGTCCTTTaGGGTGTCCCAGAAGCAGCTGTGGTTGTCACCTCT | + |
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Preference number: 6 (lower is better) Translates to: WPVGNAQEDKVL*GVPEAAVVVTS Trigger: AGAGGTGACAACCACAGCTGCTTCTGGGACACCCCAAAGGACTTTATCCTCCTGGGCATTTCCGACAGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071943.6 ENSMUST00000214351.2 ENSMUST00000215339.2 |
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