Pregenerated sensors for OLFR221 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044286Ensembl transcript IDs: ENSMUST00000052560.7, ENSMUST00000214071.2, ENSMUST00000214342.2, ENSMUST00000216188.2, ENSMUST00000216907.2
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTCTGCCTAGACGCTGCCATACTTCCACCTTGATAAAAATGGACTaGACCTCTGAACCTGTAAGCCAGCCCCAGTTAAATGTTGTCCCT | + |
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Preference number: 1 (lower is better) Translates to: CLPRRCHTSTLIKMD*TSEPVSQPQLNVVP Trigger: AGGGACAACATTTAACTGGGGCTGGCTTACAGGTTCAGAGGTTCAGTCCATTTTTATCAAGGTGGAAGTATGGCAGCGTCTAGGCAGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| 3UTR GCA 90 bp | CTCTTTGTTTCCCCTTCTTCTGTTCCTGTTCATTTCCCAACATCTTaGTTCTATCTTCATGTCCTCCTCCCGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: LFVSPSSVPVHFPTS*FYLHVLLPCVCVCV Trigger: CACACACACACACACACACGGGAGGAGGACATGAAGATAGAAGCAAGATGTTGGGAAATGAACAGGAACAGAAGAAGGGGAAACAAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| 3UTR CAA 90 bp | TCCAGACCAGAGGGTGTGATTCACAGGCTGAGCTTGAGAGCACGCTaGGGGACAGCACCCCAGAAGGTGCAGCTCTCTTTCCTTCCTAAA | + |
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Preference number: 2 (lower is better) Translates to: SRPEGVIHRLSLRAR*GTAPQKVQLSFLPK Trigger: TTTAGGAAGGAAAGAGAGCTGCACCTTCTGGGGTGCTGTCCCCAAGCGTGCTCTCAAGCTCAGCCTGTGAATCACACCCTCTGGTCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| 3UTR-3UTR GCA 90 bp | ACCCTCTTTGTTTCCCCTTCTTCTGTTCCTGTTCATTTCCCAACATCTTGCTTCGACCTTTTTCCTAGCTaGCTGGAAGCCTTTCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: TLFVSPSSVPVHFPTSCFDLFPS*LEAFPA Trigger: AGCAGGAAAGGCTTCCAGGCAGCTAGGAAAAAGGTC...GAAGCAAGATGTTGGGAAATGAACAGGAACAGAAGAAGGGGAAACAAAGAGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCATGTCCTCCTCCCGTGTGTGTGTGTGTGTGTGTGTGTATGTGTTTATGATAAGGGATTAAAAGTATaGGTCACTATGGCTCCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: LHVLLPCVCVCVCVCVYDKGLKV*VTMAPR Trigger: CCTGGGAGCCATAGTGACTCATACTTTTAATCCCTT...ATCATAAACACATACACACACACACACACACACACACGGGAGGAGGACATGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| 3UTR-3UTR GCA 90 bp | CATAAGAAGACAGGAGCCGAAGACGTGGCTACTCAAGGACTTCTGAATATTTTAGACCTTTTTCCTAGCTaGCTGGAAGCCTTTCCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: HKKTGAEDVATQGLLNILDLFPS*LEAFPA Trigger: AGCAGGAAAGGCTTCCAGGCAGCTAGGAAAAAGGTC...TAAAATATTCAGAAGTCCTTGAGTAGCCACGTCTTCGGCTCCTGTCTTCTTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCATGTCCTCCTCCCGTGTGTGTGTGTGTGTGTGTGTGTATGTGTTTATGATCCTGGAAGCCTTTCCTaGTTGCTTTCAAAACAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: LHVLLPCVCVCVCVCVYDPGSLS*LLSKQD Trigger: ATCTTGTTTTGAAAGCAAGCAGGAAAGGCTTCCAGG...ATCATAAACACATACACACACACACACACACACACACGGGAGGAGGACATGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| 3UTR-3UTR CCA 90 bp | CATAAGAAGACAGGAGCCGAAGACGTGGCTACTCAAGGACTTCTGAATATTTTATTTTTCCTAGCTGCCTaGAAGCCTTTCCTGCTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: HKKTGAEDVATQGLLNILFFLAA*KPFLLA Trigger: AGCAAGCAGGAAAGGCTTCCAGGCAGCTAGGAAAAA...TAAAATATTCAGAAGTCCTTGAGTAGCCACGTCTTCGGCTCCTGTCTTCTTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| 3UTR-3UTR CCA 90 bp | ACCCTCTTTGTTTCCCCTTCTTCTGTTCCTGTTCATTTCCCAACATCTTGCTTCGAAGACCATCTGTGGTaGTTTGAATATCTTTGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: TLFVSPSSVPVHFPTSCFEDHLW*FEYLWP Trigger: GGGCCAAAGATATTCAAACCACCACAGATGGTCTTC...GAAGCAAGATGTTGGGAAATGAACAGGAACAGAAGAAGGGGAAACAAAGAGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCATGTCCTCCTCCCGTGTGTGTGTGTGTGTGTGTGTGTATGTGTTTATGATCAACAGTTCTTCTTGTaGATGGTTACAAAAGCGCCT | + |
|
Preference number: 2 (lower is better) Translates to: LHVLLPCVCVCVCVCVYDQQFFL*MVTKAP Trigger: AGGCGCTTTTGTAACCATCCACAAGAAGAACTGTTG...ATCATAAACACATACACACACACACACACACACACACGGGAGGAGGACATGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| 3UTR-3UTR CCA 90 bp | ACCCTCTTTGTTTCCCCTTCTTCTGTTCCTGTTCATTTCCCAACATCTTGCTTCAGCAGAAGATCTTTCTaGACTCGTGGTCTCTGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: TLFVSPSSVPVHFPTSCFSRRSF*TRGLCE Trigger: TTCACAGAGACCACGAGTCCAGAAAGATCTTCTGCT...GAAGCAAGATGTTGGGAAATGAACAGGAACAGAAGAAGGGGAAACAAAGAGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCATGTCCTCCTCCCGTGTGTGTGTGTGTGTGTGTGTGTATGTGTTTATGATAAGTATGAGTCACTATaGCTCCCAGGAAACAACCTT | + |
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Preference number: 2 (lower is better) Translates to: LHVLLPCVCVCVCVCVYDKYESL*LPGNNL Trigger: AAGGTTGTTTCCTGGGAGCCATAGTGACTCATACTT...ATCATAAACACATACACACACACACACACACACACACGGGAGGAGGACATGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCATGTCCTCCTCCCGTGTGTGTGTGTGTGTGTGTGTGTATGTGTTTATGATATTAGTCTTGACCAGTaGATGCAATTAAGCAAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: LHVLLPCVCVCVCVCVYDISLDQ*MQLSKS Trigger: GCTCTTGCTTAATTGCATTCACTGGTCAAGACTAAT...ATCATAAACACATACACACACACACACACACACACACGGGAGGAGGACATGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| 3UTR-3UTR CCA 90 bp | CATAAGAAGACAGGAGCCGAAGACGTGGCTACTCAAGGACTTCTGAATATTTTAGAAGACCATCTGTGGTaGTTTGAATATCTTTGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: HKKTGAEDVATQGLLNILEDHLW*FEYLWP Trigger: GGGCCAAAGATATTCAAACCACCACAGATGGTCTTC...TAAAATATTCAGAAGTCCTTGAGTAGCCACGTCTTCGGCTCCTGTCTTCTTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCATGTCCTCCTCCCGTGTGTGTGTGTGTGTGTGTGTGTATGTGTTTATGATCAAGAAGACCATCTGTaGTGGTTTGAATATCTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: LHVLLPCVCVCVCVCVYDQEDHL*WFEYLW Trigger: CCAAAGATATTCAAACCACCACAGATGGTCTTCTTG...ATCATAAACACATACACACACACACACACACACACACGGGAGGAGGACATGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| 3UTR-3UTR CCA 90 bp | ACCCTCTTTGTTTCCCCTTCTTCTGTTCCTGTTCATTTCCCAACATCTTGCTTCCAAGAAGACCATCTGTaGTGGTTTGAATATCTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: TLFVSPSSVPVHFPTSCFQEDHL*WFEYLW Trigger: CCAAAGATATTCAAACCACCACAGATGGTCTTCTTG...GAAGCAAGATGTTGGGAAATGAACAGGAACAGAAGAAGGGGAAACAAAGAGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| 3UTR-3UTR TCA 90 bp | CATAAGAAGACAGGAGCCGAAGACGTGGCTACTCAAGGACTTCTGAATATTTTATTGATAAAAATGGACTaGACCTCTGAACCTGTAAGC | + |
|
Preference number: 2 (lower is better) Translates to: HKKTGAEDVATQGLLNILLIKMD*TSEPVS Trigger: GCTTACAGGTTCAGAGGTTCAGTCCATTTTTATCAA...TAAAATATTCAGAAGTCCTTGAGTAGCCACGTCTTCGGCTCCTGTCTTCTTATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTTGGAGGAAGTATGTCACTTTAAGACCTTTTTCCTAGCTGCCTGGAAGCCTTTGATAAAAATGGACTaGACCTCTGAACCTGTAAGC | + |
|
Preference number: 2 (lower is better) Translates to: FLEEVCHFKTFFLAAWKPLIKMD*TSEPVS Trigger: GCTTACAGGTTCAGAGGTTCAGTCCATTTTTATCAA...AGGCTTCCAGGCAGCTAGGAAAAAGGTCTTAAAGTGACATACTTCCTCCAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| 3UTR-3UTR GCA 90 bp | CATAAGAAGACAGGAGCCGAAGACGTGGCTACTCAAGGACTTCTGAATATTTTACATTTCCCAACATCTTaGTTCTATCTTCATGTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: HKKTGAEDVATQGLLNILHFPTS*FYLHVL Trigger: GAGGACATGAAGATAGAAGCAAGATGTTGGGAAATG...TAAAATATTCAGAAGTCCTTGAGTAGCCACGTCTTCGGCTCCTGTCTTCTTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| 3UTR CCA 72 bp | CGTGGTCTCTGTGAAACCAACAGTTCTTCTTGTGGATaGTTACAAAAGCGCCTCCAGACCAGAGGGTGTGAT | + |
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Preference number: 3 (lower is better) Translates to: RGLCETNSSSCG*LQKRLQTRGCD Trigger: ATCACACCCTCTGGTCTGGAGGCGCTTTTGTAACCATCCACAAGAAGAACTGTTGGTTTCACAGAGACCACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| 3UTR GCA 72 bp | TCCCCTTCTTCTGTTCCTGTTCATTTCCCAACATCTTaGTTCTATCTTCATGTCCTCCTCCCGTGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SPSSVPVHFPTS*FYLHVLLPCVC Trigger: ACACACACACGGGAGGAGGACATGAAGATAGAAGCAAGATGTTGGGAAATGAACAGGAACAGAAGAAGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| 3UTR GCA 72 bp | AGCCAGCCCCAGTTAAATGTTGTCCCTTATAAGAGCTaGCTTAGTCATGGTGTCTCTTCACAGCAATGGAAA | + |
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Preference number: 3 (lower is better) Translates to: SQPQLNVVPYKS*LSHGVSSQQWK Trigger: TTTCCATTGCTGTGAAGAGACACCATGACTAAGGCAGCTCTTATAAGGGACAACATTTAACTGGGGCTGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| 3UTR-3UTR CAA 90 bp | CTTCATGTCCTCCTCCCGTGTGTGTGTGTGTGTGTGTGTGTATGTGTTTATGATGTAGGTGTCGGTTTTTaGGAGGAAGTATGTCACTTT | + |
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Preference number: 3 (lower is better) Translates to: LHVLLPCVCVCVCVCVYDVGVGF*EEVCHF Trigger: AAAGTGACATACTTCCTCCAAAAAACCGACACCTAC...ATCATAAACACATACACACACACACACACACACACACGGGAGGAGGACATGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| 3UTR-3UTR CAA 90 bp | CTTCATGTCCTCCTCCCGTGTGTGTGTGTGTGTGTGTGTGTATGTGTTTATGATAACCAACAGTTCTTCTaGTGGATGGTTACAAAAGCG | + |
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Preference number: 3 (lower is better) Translates to: LHVLLPCVCVCVCVCVYDNQQFF*WMVTKA Trigger: CGCTTTTGTAACCATCCACAAGAAGAACTGTTGGTT...ATCATAAACACATACACACACACACACACACACACACGGGAGGAGGACATGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| 3UTR-3UTR CAA 90 bp | CATAAGAAGACAGGAGCCGAAGACGTGGCTACTCAAGGACTTCTGAATATTTTACATTCTCCACCCTCTTaGTTTCCCCTTCTTCTGTTC | + |
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Preference number: 3 (lower is better) Translates to: HKKTGAEDVATQGLLNILHSPPS*FPLLLF Trigger: GAACAGAAGAAGGGGAAACAAAGAGGGTGGAGAATG...TAAAATATTCAGAAGTCCTTGAGTAGCCACGTCTTCGGCTCCTGTCTTCTTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| 3UTR-3UTR CAA 90 bp | ACCCTCTTTGTTTCCCCTTCTTCTGTTCCTGTTCATTTCCCAACATCTTGCTTCGTAGGTGTCGGTTTTTaGGAGGAAGTATGTCACTTT | + |
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Preference number: 3 (lower is better) Translates to: TLFVSPSSVPVHFPTSCFVGVGF*EEVCHF Trigger: AAAGTGACATACTTCCTCCAAAAAACCGACACCTAC...GAAGCAAGATGTTGGGAAATGAACAGGAACAGAAGAAGGGGAAACAAAGAGGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| 3UTR-3UTR CAA 90 bp | CATAAGAAGACAGGAGCCGAAGACGTGGCTACTCAAGGACTTCTGAATATTTTAGTAGGTGTCGGTTTTTaGGAGGAAGTATGTCACTTT | + |
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Preference number: 3 (lower is better) Translates to: HKKTGAEDVATQGLLNILVGVGF*EEVCHF Trigger: AAAGTGACATACTTCCTCCAAAAAACCGACACCTAC...TAAAATATTCAGAAGTCCTTGAGTAGCCACGTCTTCGGCTCCTGTCTTCTTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| CDS-3UTR TCA 90 bp | CAGAAGGTGCAGCTCTCTTTCCTTCCTAAAGACACGAGTCTCAAGAAGACCATCGCTGGGGGTCACTGGTaGGGCCCAAGAGTTCAAACT | + |
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Preference number: 4 (lower is better) Translates to: QKVQLSFLPKDTSLKKTIAGGHW*GPRVQT Trigger: AGTTTGAACTCTTGGGCCTCACCAGTGACCCCCAGC...GATGGTCTTCTTGAGACTCGTGTCTTTAGGAAGGAAAGAGAGCTGCACCTTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| CDS-3UTR TCA 90 bp | CTTCATGTCCTCCTCCCGTGTGTGTGTGTGTGTGTGTGTGTATGTGTTTATGATGCTGGGGGTCACTGGTaGGGCCCAAGAGTTCAAACT | + |
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Preference number: 4 (lower is better) Translates to: LHVLLPCVCVCVCVCVYDAGGHW*GPRVQT Trigger: AGTTTGAACTCTTGGGCCTCACCAGTGACCCCCAGC...ATCATAAACACATACACACACACACACACACACACACGGGAGGAGGACATGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| CDS-3UTR TCA 90 bp | CCTGTAAGCCAGCCCCAGTTAAATGTTGTCCCTTATAAGAGCTGCCTTAGTCATGCTGGGGGTCACTGGTaGGGCCCAAGAGTTCAAACT | + |
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Preference number: 4 (lower is better) Translates to: PVSQPQLNVVPYKSCLSHAGGHW*GPRVQT Trigger: AGTTTGAACTCTTGGGCCTCACCAGTGACCCCCAGC...ATGACTAAGGCAGCTCTTATAAGGGACAACATTTAACTGGGGCTGGCTTACAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| CDS-3UTR TCA 90 bp | CAGAAGGTGCAGCTCTCTTTCCTTCCTAAAGACACGAGTCTCAAGAAGACCATCAGGTGGAGAACGCCTTaGACCTGCCCTGGTTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: QKVQLSFLPKDTSLKKTIRWRTP*TCPGLN Trigger: GTTCAAACCAGGGCAGGTTCAAGGCGTTCTCCACCT...GATGGTCTTCTTGAGACTCGTGTCTTTAGGAAGGAAAGAGAGCTGCACCTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| CDS-3UTR GCA 90 bp | TCAAAACAAGATATAGAACTCTCAGCTCTGCCCGAACCTTGTCTGCCTAGACGCAGATCACGGCAACTGTaGGGTCCTGGGTCAAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: SKQDIELSALPEPCLPRRRSRQL*GPGSRS Trigger: ACTCCTTGACCCAGGACCGCACAGTTGCCGTGATCT...GCGTCTAGGCAGACAAGGTTCGGGCAGAGCTGAGAGTTCTATATCTTGTTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| CDS-3UTR GCA 90 bp | CAGAAGGTGCAGCTCTCTTTCCTTCCTAAAGACACGAGTCTCAAGAAGACCATCAGATCACGGCAACTGTaGGGTCCTGGGTCAAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: QKVQLSFLPKDTSLKKTIRSRQL*GPGSRS Trigger: ACTCCTTGACCCAGGACCGCACAGTTGCCGTGATCT...GATGGTCTTCTTGAGACTCGTGTCTTTAGGAAGGAAAGAGAGCTGCACCTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| CDS-3UTR TCA 90 bp | CTTCATGTCCTCCTCCCGTGTGTGTGTGTGTGTGTGTGTGTATGTGTTTATGATAGGTGGAGAACGCCTTaGACCTGCCCTGGTTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: LHVLLPCVCVCVCVCVYDRWRTP*TCPGLN Trigger: GTTCAAACCAGGGCAGGTTCAAGGCGTTCTCCACCT...ATCATAAACACATACACACACACACACACACACACACGGGAGGAGGACATGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| CDS-3UTR TCA 90 bp | CAGCCCCAGTTAAATGTTGTCCCTTATAAGAGCTGCCTTAGTCATGGTGTCTCTAGGTGGAGAACGCCTTaGACCTGCCCTGGTTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: QPQLNVVPYKSCLSHGVSRWRTP*TCPGLN Trigger: GTTCAAACCAGGGCAGGTTCAAGGCGTTCTCCACCT...AGAGACACCATGACTAAGGCAGCTCTTATAAGGGACAACATTTAACTGGGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| CDS-3UTR TCA 90 bp | CCTGTAAGCCAGCCCCAGTTAAATGTTGTCCCTTATAAGAGCTGCCTTAGTCATAGGTGGAGAACGCCTTaGACCTGCCCTGGTTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: PVSQPQLNVVPYKSCLSHRWRTP*TCPGLN Trigger: GTTCAAACCAGGGCAGGTTCAAGGCGTTCTCCACCT...ATGACTAAGGCAGCTCTTATAAGGGACAACATTTAACTGGGGCTGGCTTACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| CDS-3UTR GCA 90 bp | GTAAGCCAGCCCCAGTTAAATGTTGTCCCTTATAAGAGCTGCCTTAGTCATGGTAGATCACGGCAACTGTaGGGTCCTGGGTCAAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: VSQPQLNVVPYKSCLSHGRSRQL*GPGSRS Trigger: ACTCCTTGACCCAGGACCGCACAGTTGCCGTGATCT...ACCATGACTAAGGCAGCTCTTATAAGGGACAACATTTAACTGGGGCTGGCTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| CDS-3UTR CCA 90 bp | CCTGTAAGCCAGCCCCAGTTAAATGTTGTCCCTTATAAGAGCTGCCTTAGTCATACAAAGAGCAGCTTCTaGAGCTGGGGGTCACTGGTG | + |
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Preference number: 4 (lower is better) Translates to: PVSQPQLNVVPYKSCLSHTKSSF*SWGSLV Trigger: CACCAGTGACCCCCAGCTCCAGAAGCTGCTCTTTGT...ATGACTAAGGCAGCTCTTATAAGGGACAACATTTAACTGGGGCTGGCTTACAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| CDS-3UTR TCA 90 bp | GTAAGCCAGCCCCAGTTAAATGTTGTCCCTTATAAGAGCTGCCTTAGTCATGGTCGCAGAAGAAATGAGTaGCCACGTGAGCACCACAGA | + |
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Preference number: 4 (lower is better) Translates to: VSQPQLNVVPYKSCLSHGRRRNE*PREHHR Trigger: TCTGTGGTGCTCACGTGGTCACTCATTTCTTCTGCG...ACCATGACTAAGGCAGCTCTTATAAGGGACAACATTTAACTGGGGCTGGCTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| CDS-3UTR CCA 90 bp | CAGAAGGTGCAGCTCTCTTTCCTTCCTAAAGACACGAGTCTCAAGAAGACCATCGAGAGGCACAGACATTaGGAGACACTATGGTCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QKVQLSFLPKDTSLKKTIERHRH*ETLWSD Trigger: ATCCGACCATAGTGTCTCCCAATGTCTGTGCCTCTC...GATGGTCTTCTTGAGACTCGTGTCTTTAGGAAGGAAAGAGAGCTGCACCTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS-3UTR CCA 90 bp | AGCCAGCCCCAGTTAAATGTTGTCCCTTATAAGAGCTGCCTTAGTCATGGTGTCGAGAGGCACAGACATTaGGAGACACTATGGTCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SQPQLNVVPYKSCLSHGVERHRH*ETLWSD Trigger: ATCCGACCATAGTGTCTCCCAATGTCTGTGCCTCTC...GACACCATGACTAAGGCAGCTCTTATAAGGGACAACATTTAACTGGGGCTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS-3UTR TCA 90 bp | ACCCTCTTTGTTTCCCCTTCTTCTGTTCCTGTTCATTTCCCAACATCTTGCTTCCGCAGAAGAAATGAGTaGCCACGTGAGCACCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: TLFVSPSSVPVHFPTSCFRRRNE*PREHHR Trigger: TCTGTGGTGCTCACGTGGTCACTCATTTCTTCTGCG...GAAGCAAGATGTTGGGAAATGAACAGGAACAGAAGAAGGGGAAACAAAGAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS-3UTR GCA 90 bp | CATAAGAAGACAGGAGCCGAAGACGTGGCTACTCAAGGACTTCTGAATATTTTAAGATCACGGCAACTGTaGGGTCCTGGGTCAAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HKKTGAEDVATQGLLNILRSRQL*GPGSRS Trigger: ACTCCTTGACCCAGGACCGCACAGTTGCCGTGATCT...TAAAATATTCAGAAGTCCTTGAGTAGCCACGTCTTCGGCTCCTGTCTTCTTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS-3UTR GCA 90 bp | CTTATAAGAGCTGCCTTAGTCATGGTGTCTCTTCACAGCAATGGAAACTGTAACAGATCACGGCAACTGTaGGGTCCTGGGTCAAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LIRAALVMVSLHSNGNCNRSRQL*GPGSRS Trigger: ACTCCTTGACCCAGGACCGCACAGTTGCCGTGATCT...GTTACAGTTTCCATTGCTGTGAAGAGACACCATGACTAAGGCAGCTCTTATAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS-3UTR CCA 90 bp | CAGCCCCAGTTAAATGTTGTCCCTTATAAGAGCTGCCTTAGTCATGGTGTCTCTGAGAGGCACAGACATTaGGAGACACTATGGTCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QPQLNVVPYKSCLSHGVSERHRH*ETLWSD Trigger: ATCCGACCATAGTGTCTCCCAATGTCTGTGCCTCTC...AGAGACACCATGACTAAGGCAGCTCTTATAAGGGACAACATTTAACTGGGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS-3UTR CCA 90 bp | AGCCAGCCCCAGTTAAATGTTGTCCCTTATAAGAGCTGCCTTAGTCATGGTGTCTCAAACTCCATCTCGTaGCTCAGGTTAGTTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQPQLNVVPYKSCLSHGVSNSIS*LRLVLS Trigger: GGAAAGAACTAACCTGAGCCACGAGATGGAGTTTGA...GACACCATGACTAAGGCAGCTCTTATAAGGGACAACATTTAACTGGGGCTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS-3UTR CCA 90 bp | CAGAAGGTGCAGCTCTCTTTCCTTCCTAAAGACACGAGTCTCAAGAAGACCATCAGGGTGGTACTCACATaGATGAGAAAGAACATGACC | + |
|
Preference number: 4 (lower is better) Translates to: QKVQLSFLPKDTSLKKTIRVVLT*MRKNMT Trigger: GGTCATGTTCTTTCTCATCCATGTGAGTACCACCCT...GATGGTCTTCTTGAGACTCGTGTCTTTAGGAAGGAAAGAGAGCTGCACCTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS-3UTR TCA 90 bp | CAGCCCCAGTTAAATGTTGTCCCTTATAAGAGCTGCCTTAGTCATGGTGTCTCTAGGAGATCAAGATGGTaGGAGTACAGCTCAAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QPQLNVVPYKSCLSHGVSRRSRW*EYSSKG Trigger: ACCTTTTGAGCTGTACTCTCACCATCTTGATCTCCT...AGAGACACCATGACTAAGGCAGCTCTTATAAGGGACAACATTTAACTGGGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS-3UTR TCA 90 bp | GTAAGCCAGCCCCAGTTAAATGTTGTCCCTTATAAGAGCTGCCTTAGTCATGGTAGGAGATCAAGATGGTaGGAGTACAGCTCAAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VSQPQLNVVPYKSCLSHGRRSRW*EYSSKG Trigger: ACCTTTTGAGCTGTACTCTCACCATCTTGATCTCCT...ACCATGACTAAGGCAGCTCTTATAAGGGACAACATTTAACTGGGGCTGGCTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS-3UTR TCA 90 bp | CCTGTAAGCCAGCCCCAGTTAAATGTTGTCCCTTATAAGAGCTGCCTTAGTCATAGGAGATCAAGATGGTaGGAGTACAGCTCAAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PVSQPQLNVVPYKSCLSHRRSRW*EYSSKG Trigger: ACCTTTTGAGCTGTACTCTCACCATCTTGATCTCCT...ATGACTAAGGCAGCTCTTATAAGGGACAACATTTAACTGGGGCTGGCTTACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS-3UTR GCA 90 bp | GTAAGCCAGCCCCAGTTAAATGTTGTCCCTTATAAGAGCTGCCTTAGTCATGGTGATAGAGGAGAGGACTaGAAACAGCAACATAGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: VSQPQLNVVPYKSCLSHGDRGED*KQQHSD Trigger: ATCGCTATGTTGCTGTTTGCAGTCCTCTCCTCTATC...ACCATGACTAAGGCAGCTCTTATAAGGGACAACATTTAACTGGGGCTGGCTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS-3UTR GCA 90 bp | CCTGTAAGCCAGCCCCAGTTAAATGTTGTCCCTTATAAGAGCTGCCTTAGTCATGATAGAGGAGAGGACTaGAAACAGCAACATAGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: PVSQPQLNVVPYKSCLSHDRGED*KQQHSD Trigger: ATCGCTATGTTGCTGTTTGCAGTCCTCTCCTCTATC...ATGACTAAGGCAGCTCTTATAAGGGACAACATTTAACTGGGGCTGGCTTACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS-3UTR CCA 90 bp | CCTGTAAGCCAGCCCCAGTTAAATGTTGTCCCTTATAAGAGCTGCCTTAGTCATTCAAACTCCATCTCGTaGCTCAGGTTAGTTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PVSQPQLNVVPYKSCLSHSNSIS*LRLVLS Trigger: GGAAAGAACTAACCTGAGCCACGAGATGGAGTTTGA...ATGACTAAGGCAGCTCTTATAAGGGACAACATTTAACTGGGGCTGGCTTACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS-3UTR CCA 90 bp | CAGCCCCAGTTAAATGTTGTCCCTTATAAGAGCTGCCTTAGTCATGGTGTCTCTTCAAACTCCATCTCGTaGCTCAGGTTAGTTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QPQLNVVPYKSCLSHGVSSNSIS*LRLVLS Trigger: GGAAAGAACTAACCTGAGCCACGAGATGGAGTTTGA...AGAGACACCATGACTAAGGCAGCTCTTATAAGGGACAACATTTAACTGGGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS-3UTR CCA 90 bp | GTAAGCCAGCCCCAGTTAAATGTTGTCCCTTATAAGAGCTGCCTTAGTCATGGTAGGGTGGTACTCACATaGATGAGAAAGAACATGACC | + |
|
Preference number: 4 (lower is better) Translates to: VSQPQLNVVPYKSCLSHGRVVLT*MRKNMT Trigger: GGTCATGTTCTTTCTCATCCATGTGAGTACCACCCT...ACCATGACTAAGGCAGCTCTTATAAGGGACAACATTTAACTGGGGCTGGCTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS-3UTR CCA 90 bp | CTTATAAGAGCTGCCTTAGTCATGGTGTCTCTTCACAGCAATGGAAACTGTAACGAGAGGCACAGACATTaGGAGACACTATGGTCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LIRAALVMVSLHSNGNCNERHRH*ETLWSD Trigger: ATCCGACCATAGTGTCTCCCAATGTCTGTGCCTCTC...GTTACAGTTTCCATTGCTGTGAAGAGACACCATGACTAAGGCAGCTCTTATAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS-3UTR TCA 90 bp | ACCCTCTTTGTTTCCCCTTCTTCTGTTCCTGTTCATTTCCCAACATCTTGCTTCAGGAGATCAAGATGGTaGGAGTACAGCTCAAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TLFVSPSSVPVHFPTSCFRRSRW*EYSSKG Trigger: ACCTTTTGAGCTGTACTCTCACCATCTTGATCTCCT...GAAGCAAGATGTTGGGAAATGAACAGGAACAGAAGAAGGGGAAACAAAGAGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS-3UTR TCA 90 bp | TCCCTTATAAGAGCTGCCTTAGTCATGGTGTCTCTTCACAGCAATGGAAACTGTAGGAGATCAAGATGGTaGGAGTACAGCTCAAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLIRAALVMVSLHSNGNCRRSRW*EYSSKG Trigger: ACCTTTTGAGCTGTACTCTCACCATCTTGATCTCCT...ACAGTTTCCATTGCTGTGAAGAGACACCATGACTAAGGCAGCTCTTATAAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS-3UTR GCA 90 bp | AGCCAGCCCCAGTTAAATGTTGTCCCTTATAAGAGCTGCCTTAGTCATGGTGTCAGAACATCTGAGCCATaGAGCCAAAGTAAGAGATTA | + |
|
Preference number: 4 (lower is better) Translates to: SQPQLNVVPYKSCLSHGVRTSEP*SQSKRL Trigger: TAATCTCTTACTTTGGCTGCATGGCTCAGATGTTCT...GACACCATGACTAAGGCAGCTCTTATAAGGGACAACATTTAACTGGGGCTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS-3UTR GCA 90 bp | TCAAAACAAGATATAGAACTCTCAGCTCTGCCCGAACCTTGTCTGCCTAGACGCAGAACATCTGAGCCATaGAGCCAAAGTAAGAGATTA | + |
|
Preference number: 4 (lower is better) Translates to: SKQDIELSALPEPCLPRRRTSEP*SQSKRL Trigger: TAATCTCTTACTTTGGCTGCATGGCTCAGATGTTCT...GCGTCTAGGCAGACAAGGTTCGGGCAGAGCTGAGAGTTCTATATCTTGTTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS-3UTR GCA 90 bp | TCCCTTATAAGAGCTGCCTTAGTCATGGTGTCTCTTCACAGCAATGGAAACTGTGATAGAGGAGAGGACTaGAAACAGCAACATAGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: SLIRAALVMVSLHSNGNCDRGED*KQQHSD Trigger: ATCGCTATGTTGCTGTTTGCAGTCCTCTCCTCTATC...ACAGTTTCCATTGCTGTGAAGAGACACCATGACTAAGGCAGCTCTTATAAGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS-3UTR CCA 90 bp | TCCCTTATAAGAGCTGCCTTAGTCATGGTGTCTCTTCACAGCAATGGAAACTGTTCAAACTCCATCTCGTaGCTCAGGTTAGTTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLIRAALVMVSLHSNGNCSNSIS*LRLVLS Trigger: GGAAAGAACTAACCTGAGCCACGAGATGGAGTTTGA...ACAGTTTCCATTGCTGTGAAGAGACACCATGACTAAGGCAGCTCTTATAAGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS-3UTR CCA 90 bp | CTGCCTGGAAGCCTTTCCTGCTTGCTTTCAAAACAAGATATAGAACTCTCAGCTAGGGTGGTACTCACATaGATGAGAAAGAACATGACC | + |
|
Preference number: 4 (lower is better) Translates to: LPGSLSCLLSKQDIELSARVVLT*MRKNMT Trigger: GGTCATGTTCTTTCTCATCCATGTGAGTACCACCCT...AGCTGAGAGTTCTATATCTTGTTTTGAAAGCAAGCAGGAAAGGCTTCCAGGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS-3UTR CCA 90 bp | TCCCTTATAAGAGCTGCCTTAGTCATGGTGTCTCTTCACAGCAATGGAAACTGTAGGGTGGTACTCACATaGATGAGAAAGAACATGACC | + |
|
Preference number: 4 (lower is better) Translates to: SLIRAALVMVSLHSNGNCRVVLT*MRKNMT Trigger: GGTCATGTTCTTTCTCATCCATGTGAGTACCACCCT...ACAGTTTCCATTGCTGTGAAGAGACACCATGACTAAGGCAGCTCTTATAAGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS-3UTR GCA 90 bp | CCTGTAAGCCAGCCCCAGTTAAATGTTGTCCCTTATAAGAGCTGCCTTAGTCATAGAACATCTGAGCCATaGAGCCAAAGTAAGAGATTA | + |
|
Preference number: 4 (lower is better) Translates to: PVSQPQLNVVPYKSCLSHRTSEP*SQSKRL Trigger: TAATCTCTTACTTTGGCTGCATGGCTCAGATGTTCT...ATGACTAAGGCAGCTCTTATAAGGGACAACATTTAACTGGGGCTGGCTTACAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS-3UTR GCA 90 bp | CTTCATGTCCTCCTCCCGTGTGTGTGTGTGTGTGTGTGTGTATGTGTTTATGATAGAACATCTGAGCCATaGAGCCAAAGTAAGAGATTA | + |
|
Preference number: 4 (lower is better) Translates to: LHVLLPCVCVCVCVCVYDRTSEP*SQSKRL Trigger: TAATCTCTTACTTTGGCTGCATGGCTCAGATGTTCT...ATCATAAACACATACACACACACACACACACACACACGGGAGGAGGACATGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTGGAGGAAGTATGTCACTTTAAGACCTTTTTCCTAGCTGCCTGGAAGCCTGATAGAGGAGAGGACTaGAAACAGCAACATAGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: FLEEVCHFKTFFLAAWKPDRGED*KQQHSD Trigger: ATCGCTATGTTGCTGTTTGCAGTCCTCTCCTCTATC...AGGCTTCCAGGCAGCTAGGAAAAAGGTCTTAAAGTGACATACTTCCTCCAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS-3UTR GCA 90 bp | ACCCTCTTTGTTTCCCCTTCTTCTGTTCCTGTTCATTTCCCAACATCTTGCTTCAGAACATCTGAGCCATaGAGCCAAAGTAAGAGATTA | + |
|
Preference number: 4 (lower is better) Translates to: TLFVSPSSVPVHFPTSCFRTSEP*SQSKRL Trigger: TAATCTCTTACTTTGGCTGCATGGCTCAGATGTTCT...GAAGCAAGATGTTGGGAAATGAACAGGAACAGAAGAAGGGGAAACAAAGAGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS-3UTR CCA 90 bp | AGCCAGCCCCAGTTAAATGTTGTCCCTTATAAGAGCTGCCTTAGTCATGGTGTCAAGATGCAGCTTGTATaGATAAGAGAATTGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SQPQLNVVPYKSCLSHGVKMQLV*IRELRN Trigger: GTTTCTCAATTCTCTTATCCATACAAGCTGCATCTT...GACACCATGACTAAGGCAGCTCTTATAAGGGACAACATTTAACTGGGGCTGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| 3UTR CAA 72 bp | AAGAGGTCTGACCTTGTTGGAGTAGGTGTCGGTTTTTaGGAGGAAGTATGTCACTTTAAGACCTTTTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: KRSDLVGVGVGF*EEVCHFKTFFL Trigger: TAGGAAAAAGGTCTTAAAGTGACATACTTCCTCCAAAAAACCGACACCTACTCCAACAAGGTCAGACCTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS-3UTR CCA 90 bp | CTTCATGTCCTCCTCCCGTGTGTGTGTGTGTGTGTGTGTGTATGTGTTTATGATAAGATGCAGCTTGTATaGATAAGAGAATTGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LHVLLPCVCVCVCVCVYDKMQLV*IRELRN Trigger: GTTTCTCAATTCTCTTATCCATACAAGCTGCATCTT...ATCATAAACACATACACACACACACACACACACACACGGGAGGAGGACATGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS-3UTR CCA 90 bp | TCCCTTATAAGAGCTGCCTTAGTCATGGTGTCTCTTCACAGCAATGGAAACTGTAAGATGCAGCTTGTATaGATAAGAGAATTGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SLIRAALVMVSLHSNGNCKMQLV*IRELRN Trigger: GTTTCTCAATTCTCTTATCCATACAAGCTGCATCTT...ACAGTTTCCATTGCTGTGAAGAGACACCATGACTAAGGCAGCTCTTATAAGGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTGGAGGAAGTATGTCACTTTAAGACCTTTTTCCTAGCTGCCTGGAAGCCTAAGATGCAGCTTGTATaGATAAGAGAATTGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: FLEEVCHFKTFFLAAWKPKMQLV*IRELRN Trigger: GTTTCTCAATTCTCTTATCCATACAAGCTGCATCTT...AGGCTTCCAGGCAGCTAGGAAAAAGGTCTTAAAGTGACATACTTCCTCCAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS-3UTR CCA 90 bp | CTTATAAGAGCTGCCTTAGTCATGGTGTCTCTTCACAGCAATGGAAACTGTAACAAGATGCAGCTTGTATaGATAAGAGAATTGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LIRAALVMVSLHSNGNCNKMQLV*IRELRN Trigger: GTTTCTCAATTCTCTTATCCATACAAGCTGCATCTT...GTTACAGTTTCCATTGCTGTGAAGAGACACCATGACTAAGGCAGCTCTTATAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS CCA 90 bp | GAAACCCTGCTCCATAGGAGCCCCCAATCAGAGAGGCACAGACATTaGGAGACACTATGGTCGGATAGAGGAGAGGACTGCAAACAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: ETLLHRSPQSERHRH*ETLWSDRGEDCKQQ Trigger: TTGCTGTTTGCAGTCCTCTCCTCTATCCGACCATAGTGTCTCCCAATGTCTGTGCCTCTCTGATTGGGGGCTCCTATGGAGCAGGGTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS GCA 90 bp | AAATCCAGGAGCGAAAGGCTCTTGAGGAGAGAGTACATAGGCGTGTaGAGGGTGGTACTCACATGGATGAGAAAGAACATGACCAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KSRSERLLRREYIGV*RVVLTWMRKNMTRF Trigger: GAACCTGGTCATGTTCTTTCTCATCCATGTGAGTACCACCCTGCACACGCCTATGTACTCTCTCCTCAAGAGCCTTTCGCTCCTGGATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
||
| CDS-3UTR CAA 90 bp | TCAAAACAAGATATAGAACTCTCAGCTCTGCCCGAACCTTGTCTGCCTAGACGCAGGAGCGAAAGGCTCTaGAGGAGAGAGTACATAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SKQDIELSALPEPCLPRRRSERL*RREYIG Trigger: GCCTATGTACTCTCTCCTCAAGAGCCTTTCGCTCCT...GCGTCTAGGCAGACAAGGTTCGGGCAGAGCTGAGAGTTCTATATCTTGTTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| CDS-3UTR CAA 90 bp | CAGAAGGTGCAGCTCTCTTTCCTTCCTAAAGACACGAGTCTCAAGAAGACCATCAGGAGCGAAAGGCTCTaGAGGAGAGAGTACATAGGC | + |
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Preference number: 5 (lower is better) Translates to: QKVQLSFLPKDTSLKKTIRSERL*RREYIG Trigger: GCCTATGTACTCTCTCCTCAAGAGCCTTTCGCTCCT...GATGGTCTTCTTGAGACTCGTGTCTTTAGGAAGGAAAGAGAGCTGCACCTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| CDS-3UTR CAA 90 bp | GTAAGCCAGCCCCAGTTAAATGTTGTCCCTTATAAGAGCTGCCTTAGTCATGGTCAGGTGGAGAACGCCTaGAACCTGCCCTGGTTTGAA | + |
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Preference number: 5 (lower is better) Translates to: VSQPQLNVVPYKSCLSHGQVENA*NLPWFE Trigger: TTCAAACCAGGGCAGGTTCAAGGCGTTCTCCACCTG...ACCATGACTAAGGCAGCTCTTATAAGGGACAACATTTAACTGGGGCTGGCTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| CDS-3UTR CAA 90 bp | CAGCCCCAGTTAAATGTTGTCCCTTATAAGAGCTGCCTTAGTCATGGTGTCTCTCAGGTGGAGAACGCCTaGAACCTGCCCTGGTTTGAA | + |
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Preference number: 5 (lower is better) Translates to: QPQLNVVPYKSCLSHGVSQVENA*NLPWFE Trigger: TTCAAACCAGGGCAGGTTCAAGGCGTTCTCCACCTG...AGAGACACCATGACTAAGGCAGCTCTTATAAGGGACAACATTTAACTGGGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| CDS-3UTR CAA 90 bp | CAGCCCCAGTTAAATGTTGTCCCTTATAAGAGCTGCCTTAGTCATGGTGTCTCTAGGAGCGAAAGGCTCTaGAGGAGAGAGTACATAGGC | + |
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Preference number: 5 (lower is better) Translates to: QPQLNVVPYKSCLSHGVSRSERL*RREYIG Trigger: GCCTATGTACTCTCTCCTCAAGAGCCTTTCGCTCCT...AGAGACACCATGACTAAGGCAGCTCTTATAAGGGACAACATTTAACTGGGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| CDS-3UTR CAA 90 bp | CTTCATGTCCTCCTCCCGTGTGTGTGTGTGTGTGTGTGTGTATGTGTTTATGATAGGAGCGAAAGGCTCTaGAGGAGAGAGTACATAGGC | + |
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Preference number: 5 (lower is better) Translates to: LHVLLPCVCVCVCVCVYDRSERL*RREYIG Trigger: GCCTATGTACTCTCTCCTCAAGAGCCTTTCGCTCCT...ATCATAAACACATACACACACACACACACACACACACGGGAGGAGGACATGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| CDS-3UTR CAA 90 bp | CTGCCTGGAAGCCTTTCCTGCTTGCTTTCAAAACAAGATATAGAACTCTCAGCTAGGAGCGAAAGGCTCTaGAGGAGAGAGTACATAGGC | + |
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Preference number: 5 (lower is better) Translates to: LPGSLSCLLSKQDIELSARSERL*RREYIG Trigger: GCCTATGTACTCTCTCCTCAAGAGCCTTTCGCTCCT...AGCTGAGAGTTCTATATCTTGTTTTGAAAGCAAGCAGGAAAGGCTTCCAGGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| CDS-3UTR CAA 90 bp | CTTATAAGAGCTGCCTTAGTCATGGTGTCTCTTCACAGCAATGGAAACTGTAACCAGGTGGAGAACGCCTaGAACCTGCCCTGGTTTGAA | + |
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Preference number: 5 (lower is better) Translates to: LIRAALVMVSLHSNGNCNQVENA*NLPWFE Trigger: TTCAAACCAGGGCAGGTTCAAGGCGTTCTCCACCTG...GTTACAGTTTCCATTGCTGTGAAGAGACACCATGACTAAGGCAGCTCTTATAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| CDS-3UTR CAA 90 bp | CATAAGAAGACAGGAGCCGAAGACGTGGCTACTCAAGGACTTCTGAATATTTTACAGGTGGAGAACGCCTaGAACCTGCCCTGGTTTGAA | + |
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Preference number: 5 (lower is better) Translates to: HKKTGAEDVATQGLLNILQVENA*NLPWFE Trigger: TTCAAACCAGGGCAGGTTCAAGGCGTTCTCCACCTG...TAAAATATTCAGAAGTCCTTGAGTAGCCACGTCTTCGGCTCCTGTCTTCTTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| CDS-3UTR CAA 90 bp | TTTTTGGAGGAAGTATGTCACTTTAAGACCTTTTTCCTAGCTGCCTGGAAGCCTCAGGTGGAGAACGCCTaGAACCTGCCCTGGTTTGAA | + |
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Preference number: 5 (lower is better) Translates to: FLEEVCHFKTFFLAAWKPQVENA*NLPWFE Trigger: TTCAAACCAGGGCAGGTTCAAGGCGTTCTCCACCTG...AGGCTTCCAGGCAGCTAGGAAAAAGGTCTTAAAGTGACATACTTCCTCCAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| CDS-3UTR CAA 90 bp | AGCCAGCCCCAGTTAAATGTTGTCCCTTATAAGAGCTGCCTTAGTCATGGTGTCGTACAGCTCAAAAGGTaGAAGCCGGCAAAAATGAAG | + |
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Preference number: 5 (lower is better) Translates to: SQPQLNVVPYKSCLSHGVVQLKR*KPAKMK Trigger: CTTCATTTTTGCCGGCTTCAACCTTTTGAGCTGTAC...GACACCATGACTAAGGCAGCTCTTATAAGGGACAACATTTAACTGGGGCTGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| CDS-3UTR CAA 90 bp | CCTGTAAGCCAGCCCCAGTTAAATGTTGTCCCTTATAAGAGCTGCCTTAGTCATGTACAGCTCAAAAGGTaGAAGCCGGCAAAAATGAAG | + |
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Preference number: 5 (lower is better) Translates to: PVSQPQLNVVPYKSCLSHVQLKR*KPAKMK Trigger: CTTCATTTTTGCCGGCTTCAACCTTTTGAGCTGTAC...ATGACTAAGGCAGCTCTTATAAGGGACAACATTTAACTGGGGCTGGCTTACAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| CDS-3UTR CAA 90 bp | GTAAGCCAGCCCCAGTTAAATGTTGTCCCTTATAAGAGCTGCCTTAGTCATGGTGTACAGCTCAAAAGGTaGAAGCCGGCAAAAATGAAG | + |
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Preference number: 5 (lower is better) Translates to: VSQPQLNVVPYKSCLSHGVQLKR*KPAKMK Trigger: CTTCATTTTTGCCGGCTTCAACCTTTTGAGCTGTAC...ACCATGACTAAGGCAGCTCTTATAAGGGACAACATTTAACTGGGGCTGGCTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| CDS GCA 72 bp | AGCGAAAGGCTCTTGAGGAGAGAGTACATAGGCGTGTaGAGGGTGGTACTCACATGGATGAGAAAGAACATG | + |
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Preference number: 6 (lower is better) Translates to: SERLLRREYIGV*RVVLTWMRKNM Trigger: CATGTTCTTTCTCATCCATGTGAGTACCACCCTGCACACGCCTATGTACTCTCTCCTCAAGAGCCTTTCGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| CDS GCA 72 bp | GATGCAGCTTGTATGGATAAGAGAATTGAGAAACCCTaGTCCATAGGAGCCCCCAATCAGAGAGGCACAGAC | + |
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Preference number: 6 (lower is better) Translates to: DAACMDKRIEKP*SIGAPNQRGTD Trigger: GTCTGTGCCTCTCTGATTGGGGGCTCCTATGGAGCAGGGTTTCTCAATTCTCTTATCCATACAAGCTGCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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| CDS CAA 72 bp | GATTACTTTTCTCTCAACCAAGAAGTTCAACAGTGTTaGGGGAACCACCGTAGAAGAGTAGCAGAAATCCAG | + |
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Preference number: 6 (lower is better) Translates to: DYFSLNQEVQQC*GNHRRRVAEIQ Trigger: CTGGATTTCTGCTACTCTTCTACGGTGGTTCCCCAAACACTGTTGAACTTCTTGGTTGAGAGAAAAGTAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000052560.7 ENSMUST00000214071.2 ENSMUST00000214342.2 ENSMUST00000216188.2 ENSMUST00000216907.2 |
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