Pregenerated sensors for OLFR218 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046643Ensembl transcript IDs: ENSMUST00000215844.2, ENSMUST00000216603.2
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTATCTCACTGGATGCTCCTAGCTCCAAGTAGTCAGAAAGAAGTCTaGCCTTCAGTCCTCATCAAGGAAAAACATCTCTTTACAACAGAC | + |
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Preference number: 1 (lower is better) Translates to: LSHWMLLAPSSQKEV*PSVLIKEKHLFTTD Trigger: GTCTGTTGTAAAGAGATGTTTTTCCTTGATGAGGACTGAAGGCCAGACTTCTTTCTGACTACTTGGAGCTAGGAGCATCCAGTGAGATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| 3UTR TCA 90 bp | AGCTATGAACCTCAGGACTATGAACAGCACACCTATTTTTGTAGCTaGCACATTTCCTTTTCCTGTATACACTCATCATCCCTAGGTCAA | + |
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Preference number: 1 (lower is better) Translates to: SYEPQDYEQHTYFCS*HISFSCIHSSSLGQ Trigger: TTGACCTAGGGATGATGAGTGTATACAGGAAAAGGAAATGTGTCAGCTACAAAAATAGGTGTGCTGTTCATAGTCCTGAGGTTCATAGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| 3UTR TCA 90 bp | TTACCCCATAGGATTAGATGCACCATAAACACCATAAAAACTGCTTaGAATCCAGGGAATGTTTGTTCTCCAGTGTACATAACCAGTGGA | + |
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Preference number: 1 (lower is better) Translates to: LPHRIRCTINTIKTA*NPGNVCSPVYITSG Trigger: TCCACTGGTTATGTACACTGGAGAACAAACATTCCCTGGATTTCAAGCAGTTTTTATGGTGTTTATGGTGCATCTAATCCTATGGGGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGTTCTTTACATACTGTGCAGGTCTCCTAGGCTTTCCCCATCTTCTATGGCAAGCAGTTTCATCTTCTaGGAAGATGTACCACCAGAG | + |
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Preference number: 2 (lower is better) Translates to: VVLYILCRSPRLSPSSMASSFIF*EDVPPE Trigger: CTCTGGTGGTACATCTTCTCAGAAGATGAAACTGCT...TGCCATAGAAGATGGGGAAAGCCTAGGAGACCTGCACAGTATGTAAAGAACTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| 3UTR-3UTR TCA 90 bp | TTGTGTGTAGTTCTTTACATACTGTGCAGGTCTCCTAGGCTTTCCCCATCTTCTAAAGGCCAGATCCAGTaGATGAACCTAGGTCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: LCVVLYILCRSPRLSPSSKGQIQ*MNLGPE Trigger: TTCTGGACCTAGGTTCATTCACTGGATCTGGCCTTT...AGAAGATGGGGAAAGCCTAGGAGACCTGCACAGTATGTAAAGAACTACACACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGTAGTTCTTTACATACTGTGCAGGTCTCCTAGGCTTTCCCCATCTTCTATGTTTCTTCTACAATGTTaGCTGAGTCCTAGGTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: CVVLYILCRSPRLSPSSMFLLQC*LSPRCG Trigger: TCCACACCTAGGACTCAGGCAACATTGTAGAAGAAA...CATAGAAGATGGGGAAAGCCTAGGAGACCTGCACAGTATGTAAAGAACTACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGTTCTTTACATACTGTGCAGGTCTCCTAGGCTTTCCCCATCTTCTATGGCAACCTATTTTTGTAGCTaGCACATTTCCTTTTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: VVLYILCRSPRLSPSSMATYFCS*HISFSC Trigger: ACAGGAAAAGGAAATGTGTCAGCTACAAAAATAGGT...TGCCATAGAAGATGGGGAAAGCCTAGGAGACCTGCACAGTATGTAAAGAACTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGGTCTCCTAGGCTTTCCCCATCTTCTATGGCATGTTTATATGTGTTGTCCTTACTATGAAACTCCCTaGAATTCTGTACCTTACAGT | + |
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Preference number: 2 (lower is better) Translates to: AGLLGFPHLLWHVYMCCPYYETP*NSVPYS Trigger: ACTGTAAGGTACAGAATTTCAGGGAGTTTCATAGTA...AGGACAACACATATAAACATGCCATAGAAGATGGGGAAAGCCTAGGAGACCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| 3UTR-3UTR GCA 90 bp | TTGTGTGTAGTTCTTTACATACTGTGCAGGTCTCCTAGGCTTTCCCCATCTTCTCATGACCTTCATTACTaGTTTGTGTTCTCAGCTATG | + |
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Preference number: 2 (lower is better) Translates to: LCVVLYILCRSPRLSPSSHDLHY*FVFSAM Trigger: CATAGCTGAGAACACAAAGCAGTAATGAAGGTCATG...AGAAGATGGGGAAAGCCTAGGAGACCTGCACAGTATGTAAAGAACTACACACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| 3UTR-3UTR TCA 90 bp | AACCTCAGGACTATGAACAGCACACCTATTTTTGTAGCTGACACATTTCCTTTTAGCAGTTTCATCTTCTaGGAAGATGTACCACCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: NLRTMNSTPIFVADTFPFSSFIF*EDVPPE Trigger: CTCTGGTGGTACATCTTCTCAGAAGATGAAACTGCT...AAAAGGAAATGTGTCAGCTACAAAAATAGGTGTGCTGTTCATAGTCCTGAGGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| 3UTR-3UTR GCA 90 bp | TTGTGTGTAGTTCTTTACATACTGTGCAGGTCTCCTAGGCTTTCCCCATCTTCTCAGAAAGACAAATGTTaGATGTTCTATCTCACTGGA | + |
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Preference number: 2 (lower is better) Translates to: LCVVLYILCRSPRLSPSSQKDKC*MFYLTG Trigger: TCCAGTGAGATAGAACATGCAACATTTGTCTTTCTG...AGAAGATGGGGAAAGCCTAGGAGACCTGCACAGTATGTAAAGAACTACACACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| 3UTR-3UTR GCA 90 bp | CTGAGAGAAAAGCTTGTTCTTCATATCAGAATATCCATTCTCTCCTTCTGTGACGTTCTTTACATACTGTaGAGGTCTCCTAGGCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: LREKLVLHIRISILSFCDVLYIL*RSPRLS Trigger: GGAAAGCCTAGGAGACCTGCACAGTATGTAAAGAAC...GTCACAGAAGGAGAGAATGGATATTCTGATATGAAGAACAAGCTTTTCTCTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTACCTTACAGTCCTTCTTTTTCTTCTACAATGTTGCCTGAGTCCTAGGTGTACCTATTTTTGTAGCTaGCACATTTCCTTTTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: LYLTVLLFLLQCCLSPRCTYFCS*HISFSC Trigger: ACAGGAAAAGGAAATGTGTCAGCTACAAAAATAGGT...ACACCTAGGACTCAGGCAACATTGTAGAAGAAAAAGAAGGACTGTAAGGTACAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| 3UTR-3UTR GCA 90 bp | CTGAGAGAAAAGCTTGTTCTTCATATCAGAATATCCATTCTCTCCTTCTGTGACCATGCATGTTCTTCGTaGACAATGAATGAACAGCAA | + |
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Preference number: 2 (lower is better) Translates to: LREKLVLHIRISILSFCDHACSS*TMNEQQ Trigger: TTGCTGTTCATTCATTGTGCACGAAGAACATGCATG...GTCACAGAAGGAGAGAATGGATATTCTGATATGAAGAACAAGCTTTTCTCTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| 3UTR CCA 72 bp | TGGATGCTCCTAGCTCCAAGTAGTCAGAAAGAAGTCTaGCCTTCAGTCCTCATCAAGGAAAAACATCTCTTT | + |
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Preference number: 3 (lower is better) Translates to: WMLLAPSSQKEV*PSVLIKEKHLF Trigger: AAAGAGATGTTTTTCCTTGATGAGGACTGAAGGCCAGACTTCTTTCTGACTACTTGGAGCTAGGAGCATCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| 3UTR CCA 72 bp | GGTCCAGAAAGACAAATGTTGCATGTTCTATCTCACTaGATGCTCCTAGCTCCAAGTAGTCAGAAAGAAGTC | + |
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Preference number: 3 (lower is better) Translates to: GPERQMLHVLSH*MLLAPSSQKEV Trigger: GACTTCTTTCTGACTACTTGGAGCTAGGAGCATCCAGTGAGATAGAACATGCAACATTTGTCTTTCTGGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| 3UTR-3UTR CAA 90 bp | TTGTGTGTAGTTCTTTACATACTGTGCAGGTCTCCTAGGCTTTCCCCATCTTCTCCAGAAAGACAAATGTaGCATGTTCTATCTCACTGG | + |
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Preference number: 3 (lower is better) Translates to: LCVVLYILCRSPRLSPSSPERQM*HVLSHW Trigger: CCAGTGAGATAGAACATGCAACATTTGTCTTTCTGG...AGAAGATGGGGAAAGCCTAGGAGACCTGCACAGTATGTAAAGAACTACACACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| 3UTR CCA 72 bp | TACTGTGCAGGTCTCCTAGGCTTTCCCCATCTTCTATaGCATGTTTATATGTGTTGTCCTTTTTCAGCACAT | + |
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Preference number: 3 (lower is better) Translates to: YCAGLLGFPHLL*HVYMCCPFSAH Trigger: ATGTGCTGAAAAAGGACAACACATATAAACATGCCATAGAAGATGGGGAAAGCCTAGGAGACCTGCACAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| 3UTR TCA 72 bp | CCTCAGGACTATGAACAGCACACCTATTTTTGTAGCTaGCACATTTCCTTTTCCTGTATACACTCATCATCC | + |
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Preference number: 3 (lower is better) Translates to: PQDYEQHTYFCS*HISFSCIHSSS Trigger: GGATGATGAGTGTATACAGGAAAAGGAAATGTGTCAGCTACAAAAATAGGTGTGCTGTTCATAGTCCTGAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| 3UTR TCA 72 bp | GGAAATAGAAACAGCATGCATGTTCTTCGTGCACAATaGATGAACAGCAAAAATGTGGTGTGTGACGGAGTA | + |
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Preference number: 3 (lower is better) Translates to: GNRNSMHVLRAQ*MNSKNVVCDGV Trigger: TACTCCGTCACACACCACATTTTTGCTGTTCATTCATTGTGCACGAAGAACATGCATGCTGTTTCTATTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| 3UTR-3UTR CAA 90 bp | CTGTACCTTACAGTCCTTCTTTTTCTTCTACAATGTTGCCTGAGTCCTAGGTGTGGTATATATAGTCACTaGCATGCATATAAAGGCACT | + |
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Preference number: 3 (lower is better) Translates to: LYLTVLLFLLQCCLSPRCGIYSH*HAYKGT Trigger: AGTGCCTTTATATGCATGCAAGTGACTATATATACC...ACACCTAGGACTCAGGCAACATTGTAGAAGAAAAAGAAGGACTGTAAGGTACAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| 3UTR-3UTR CAA 90 bp | ATGAACCTAGGTCCAGAAAGACAAATGTTGCATGTTCTATCTCACTGGATGCTCGGTATATATAGTCACTaGCATGCATATAAAGGCACT | + |
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Preference number: 3 (lower is better) Translates to: MNLGPERQMLHVLSHWMLGIYSH*HAYKGT Trigger: AGTGCCTTTATATGCATGCAAGTGACTATATATACC...GAGCATCCAGTGAGATAGAACATGCAACATTTGTCTTTCTGGACCTAGGTTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| 3UTR TCA 72 bp | ATAGAAACAGCATGCATGTTCTTCGTGCACAATGAATaGACAGCAAAAATGTGGTGTGTGACGGAGTATTAT | + |
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Preference number: 3 (lower is better) Translates to: IETACMFFVHNE*TAKMWCVTEYY Trigger: ATAATACTCCGTCACACACCACATTTTTGCTGTTCATTCATTGTGCACGAAGAACATGCATGCTGTTTCTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| 3UTR-3UTR CAA 90 bp | CTGAGAGAAAAGCTTGTTCTTCATATCAGAATATCCATTCTCTCCTTCTGTGACGCATGTTTATATGTGTaGTCCTTTTTCAGCACATGT | + |
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Preference number: 3 (lower is better) Translates to: LREKLVLHIRISILSFCDACLYV*SFFSTC Trigger: ACATGTGCTGAAAAAGGACAACACATATAAACATGC...GTCACAGAAGGAGAGAATGGATATTCTGATATGAAGAACAAGCTTTTCTCTCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| 3UTR TCA 72 bp | AGGATTAGATGCACCATAAACACCATAAAAACTGCTTaGAATCCAGGGAATGTTTGTTCTCCAGTGTACATA | + |
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Preference number: 3 (lower is better) Translates to: RIRCTINTIKTA*NPGNVCSPVYI Trigger: TATGTACACTGGAGAACAAACATTCCCTGGATTTCAAGCAGTTTTTATGGTGTTTATGGTGCATCTAATCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| 3UTR TCA 72 bp | TTGTCCTTTTTCAGCACATGTTTAGGTTCATTTTGGTaGGACGTTAAATGTGTAACTTCTGACATTACTATG | + |
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Preference number: 3 (lower is better) Translates to: LSFFSTCLGSFW*DVKCVTSDITM Trigger: CATAGTAATGTCAGAAGTTACACATTTAACGTCTCACCAAAATGAACCTAAACATGTGCTGAAAAAGGACAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| 3UTR CAA 72 bp | GTTTCTGGGGCTGACCGTTTGGGACTGCATACCCAATaGGCATTCCTGAGTAAGGCTTTCTACAGCTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: VSGADRLGLHTQ*AFLSKAFYSSQ Trigger: CTGAGAGCTGTAGAAAGCCTTACTCAGGAATGCCAATTGGGTATGCAGTCCCAAACGGTCAGCCCCAGAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| CDS-3UTR GCA 90 bp | CATACCCAATTGGCATTCCTGAGTAAGGCTTTCTACAGCTCTCAGCATTGCTTAGAGATGAGCCTGTCCTaGCCTAGGGAAGTCTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: HTQLAFLSKAFYSSQHCLEMSLS*PREVWD Trigger: GTCCCAGACTTCCCTAGGGCAGGACAGGCTCATCTC...TAAGCAATGCTGAGAGCTGTAGAAAGCCTTACTCAGGAATGCCAATTGGGTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| CDS-3UTR TCA 90 bp | CATACCCAATTGGCATTCCTGAGTAAGGCTTTCTACAGCTCTCAGCATTGCTTACTTCCGGCCTTCAGCTaGGGCAATCTTAAGGATGGT | + |
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Preference number: 4 (lower is better) Translates to: HTQLAFLSKAFYSSQHCLLPAFS*GNLKDG Trigger: ACCATCCTTAAGATTGCCTCAGCTGAAGGCCGGAAG...TAAGCAATGCTGAGAGCTGTAGAAAGCCTTACTCAGGAATGCCAATTGGGTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| CDS-3UTR TCA 90 bp | CATGACCTTCATTACTGCTTTGTGTTCTCAGCTATGAACCTCAGGACTATGAACCTTCCGGCCTTCAGCTaGGGCAATCTTAAGGATGGT | + |
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Preference number: 4 (lower is better) Translates to: HDLHYCFVFSAMNLRTMNLPAFS*GNLKDG Trigger: ACCATCCTTAAGATTGCCTCAGCTGAAGGCCGGAAG...GTTCATAGTCCTGAGGTTCATAGCTGAGAACACAAAGCAGTAATGAAGGTCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| CDS-3UTR GCA 90 bp | AACCTCAGGACTATGAACAGCACACCTATTTTTGTAGCTGACACATTTCCTTTTGAGATGAGCCTGTCCTaGCCTAGGGAAGTCTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: NLRTMNSTPIFVADTFPFEMSLS*PREVWD Trigger: GTCCCAGACTTCCCTAGGGCAGGACAGGCTCATCTC...AAAAGGAAATGTGTCAGCTACAAAAATAGGTGTGCTGTTCATAGTCCTGAGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| CDS-3UTR CCA 90 bp | CATACCCAATTGGCATTCCTGAGTAAGGCTTTCTACAGCTCTCAGCATTGCTTAGCTGCCAATCAAAGCTaGAGAAACCTTCAAAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: HTQLAFLSKAFYSSQHCLAANQS*RNLQRG Trigger: TCCTCTTTGAAGGTTTCTCCAGCTTTGATTGGCAGC...TAAGCAATGCTGAGAGCTGTAGAAAGCCTTACTCAGGAATGCCAATTGGGTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| CDS-3UTR CCA 90 bp | GCAGGTCTCCTAGGCTTTCCCCATCTTCTATGGCATGTTTATATGTGTTGTCCTAGAAAGTCTCAGAGATaGAGAGCATGCTTAGAAAAA | + |
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Preference number: 4 (lower is better) Translates to: AGLLGFPHLLWHVYMCCPRKSQR*RACLEK Trigger: TTTTTCTAAGCATGCTCTCCATCTCTGAGACTTTCT...AGGACAACACATATAAACATGCCATAGAAGATGGGGAAAGCCTAGGAGACCTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| CDS-3UTR GCA 90 bp | CTGAGAGAAAAGCTTGTTCTTCATATCAGAATATCCATTCTCTCCTTCTGTGACGCGGTCATAACCCATTaGTGTGAGGAGAAAACAGTT | + |
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Preference number: 4 (lower is better) Translates to: LREKLVLHIRISILSFCDAVITH*CEEKTV Trigger: AACTGTTTTCTCCTCACAGCAATGGGTTATGACCGC...GTCACAGAAGGAGAGAATGGATATTCTGATATGAAGAACAAGCTTTTCTCTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| CDS-3UTR CCA 90 bp | CTGAGAGAAAAGCTTGTTCTTCATATCAGAATATCCATTCTCTCCTTCTGTGACGCTGCCAATCAAAGCTaGAGAAACCTTCAAAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: LREKLVLHIRISILSFCDAANQS*RNLQRG Trigger: TCCTCTTTGAAGGTTTCTCCAGCTTTGATTGGCAGC...GTCACAGAAGGAGAGAATGGATATTCTGATATGAAGAACAAGCTTTTCTCTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| CDS-3UTR CCA 90 bp | TTGTGTGTAGTTCTTTACATACTGTGCAGGTCTCCTAGGCTTTCCCCATCTTCTAGAAAGTCTCAGAGATaGAGAGCATGCTTAGAAAAA | + |
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Preference number: 4 (lower is better) Translates to: LCVVLYILCRSPRLSPSSRKSQR*RACLEK Trigger: TTTTTCTAAGCATGCTCTCCATCTCTGAGACTTTCT...AGAAGATGGGGAAAGCCTAGGAGACCTGCACAGTATGTAAAGAACTACACACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| CDS-3UTR CCA 90 bp | CTGAGAGAAAAGCTTGTTCTTCATATCAGAATATCCATTCTCTCCTTCTGTGACAACACTGATGTAACCTaGACAATAGCCATGCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: LREKLVLHIRISILSFCDNTDVT*TIAMLR Trigger: CCTGAGCATGGCTATTGTCCAGGTTACATCAGTGTT...GTCACAGAAGGAGAGAATGGATATTCTGATATGAAGAACAAGCTTTTCTCTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| CDS-3UTR TCA 90 bp | AACCTCAGGACTATGAACAGCACACCTATTTTTGTAGCTGACACATTTCCTTTTTTCGTAGAGCCTCTTTaGCCTCTTTGTTTCTCAAAC | + |
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Preference number: 4 (lower is better) Translates to: NLRTMNSTPIFVADTFPFFVEPL*PLCFSN Trigger: GTTTGAGAAACAAAGAGGTCAAAGAGGCTCTACGAA...AAAAGGAAATGTGTCAGCTACAAAAATAGGTGTGCTGTTCATAGTCCTGAGGTT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| CDS-3UTR TCA 90 bp | CTGAGAGAAAAGCTTGTTCTTCATATCAGAATATCCATTCTCTCCTTCTGTGACTTCGTAGAGCCTCTTTaGCCTCTTTGTTTCTCAAAC | + |
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Preference number: 4 (lower is better) Translates to: LREKLVLHIRISILSFCDFVEPL*PLCFSN Trigger: GTTTGAGAAACAAAGAGGTCAAAGAGGCTCTACGAA...GTCACAGAAGGAGAGAATGGATATTCTGATATGAAGAACAAGCTTTTCTCTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| CDS-3UTR GCA 90 bp | AACAGCACACCTATTTTTGTAGCTGACACATTTCCTTTTCCTGTATACACTCATGCGGTCATAACCCATTaGTGTGAGGAGAAAACAGTT | + |
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Preference number: 4 (lower is better) Translates to: NSTPIFVADTFPFPVYTHAVITH*CEEKTV Trigger: AACTGTTTTCTCCTCACAGCAATGGGTTATGACCGC...ATGAGTGTATACAGGAAAAGGAAATGTGTCAGCTACAAAAATAGGTGTGCTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| 3UTR CAA 72 bp | AAACACCATAAAAACTGCTTGAAATCCAGGGAATGTTaGTTCTCCAGTGTACATAACCAGTGGAGAGTGCAA | + |
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Preference number: 4 (lower is better) Translates to: KHHKNCLKSREC*FSSVHNQWRVQ Trigger: TTGCACTCTCCACTGGTTATGTACACTGGAGAACAAACATTCCCTGGATTTCAAGCAGTTTTTATGGTGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| CDS-3UTR CAA 90 bp | GCAGGTCTCCTAGGCTTTCCCCATCTTCTATGGCATGTTTATATGTGTTGTCCTCTGTGTTGCACAACCTaGAATATCTATGGCCTGGTA | + |
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Preference number: 5 (lower is better) Translates to: AGLLGFPHLLWHVYMCCPLCCTT*NIYGLV Trigger: TACCAGGCCATAGATATTCAAGGTTGTGCAACACAG...AGGACAACACATATAAACATGCCATAGAAGATGGGGAAAGCCTAGGAGACCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| CDS-3UTR CAA 90 bp | CATGACCTTCATTACTGCTTTGTGTTCTCAGCTATGAACCTCAGGACTATGAACGTCACAATGATCATGTaGCCAGACAGAGTCAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: HDLHYCFVFSAMNLRTMNVTMIM*PDRVRR Trigger: CCTTCTGACTCTGTCTGGCAACATGATCATTGTGAC...GTTCATAGTCCTGAGGTTCATAGCTGAGAACACAAAGCAGTAATGAAGGTCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| CDS-3UTR CAA 90 bp | GGCTCCTTTCAACCTCTACCTCTCTTTAATCCTGTGTTGAAAAGTAAGACAAAGGTCACAATGATCATGTaGCCAGACAGAGTCAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: GSFQPLPLFNPVLKSKTKVTMIM*PDRVRR Trigger: CCTTCTGACTCTGTCTGGCAACATGATCATTGTGAC...CTTTGTCTTACTTTTCAACACAGGATTAAAGAGAGGTAGAGGTTGAAAGGAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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| CDS-3UTR CAA 90 bp | CATGACCTTCATTACTGCTTTGTGTTCTCAGCTATGAACCTCAGGACTATGAACCTGTGTTGCACAACCTaGAATATCTATGGCCTGGTA | + |
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Preference number: 5 (lower is better) Translates to: HDLHYCFVFSAMNLRTMNLCCTT*NIYGLV Trigger: TACCAGGCCATAGATATTCAAGGTTGTGCAACACAG...GTTCATAGTCCTGAGGTTCATAGCTGAGAACACAAAGCAGTAATGAAGGTCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215844.2 ENSMUST00000216603.2 |
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