RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR215 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000050654

Ensembl transcript IDs: ENSMUST00000061723.6

Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGGCAGCACTGTGGGTATGTGGGCTGAATTTCCAGAGCTGGATCTaGGACTATTGGGATGGCAGGAGAAGGCTTGGTTCTGAGATTCAC +
Preference number: 1 (lower is better)
Translates to: LAALWVCGLNFQSWI*DYWDGRRRLGSEIH
Trigger: GTGAATCTCAGAACCAAGCCTTCTCCTGCCATCCCAATAGTCCCAGATCCAGCTCTGGAAATTCAGCCCACATACCCACAGTGCTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR CCA 90 bp CTGTGGGTATGTGGGCTGAATTTCCAGAGCTGGATCTGGGACTATTaGGATGGCAGGAGAAGGCTTGGTTCTGAGATTCACCAGGCAAAG +
Preference number: 1 (lower is better)
Translates to: LWVCGLNFQSWIWDY*DGRRRLGSEIHQAK
Trigger: CTTTGCCTGGTGAATCTCAGAACCAAGCCTTCTCCTGCCATCCCAATAGTCCCAGATCCAGCTCTGGAAATTCAGCCCACATACCCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR TCA 90 bp TGTGTGTGCTTTTGTGATGTGAACTTCTTTCATTGGACATGTGTCTaGGGTGAGGCTGTAGCCTGCCTCAGGTTGGGCAGTAACCCATGT +
Preference number: 1 (lower is better)
Translates to: CVCFCDVNFFHWTCV*GEAVACLRLGSNPC
Trigger: ACATGGGTTACTGCCCAACCTGAGGCAGGCTACAGCCTCACCTCAGACACATGTCCAATGAAAGAAGTTCACATCACAAAAGCACACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR GCA 90 bp TTGTGTGTTCAAAGCAAGTCTGGGAGCATGAACATGGTATGGACATaGTTAATTCTGAGAGGATCCATAAGGCAAAGGCAGTGCAGGGGC +
Preference number: 1 (lower is better)
Translates to: LCVQSKSGSMNMVWT*LILRGSIRQRQCRG
Trigger: GCCCCTGCACTGCCTTTGCCTTATGGATCCTCTCAGAATTAAGCATGTCCATACCATGTTCATGCTCCCAGACTTGCTTTGAACACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR CCA 90 bp CAGGGGTTGTGTGTTCAAAGCAAGTCTGGGAGCATGAACATGGTATaGACATGCTTAATTCTGAGAGGATCCATAAGGCAAAGGCAGTGC +
Preference number: 1 (lower is better)
Translates to: QGLCVQSKSGSMNMV*TCLILRGSIRQRQC
Trigger: GCACTGCCTTTGCCTTATGGATCCTCTCAGAATTAAGCATGTCCATACCATGTTCATGCTCCCAGACTTGCTTTGAACACACAACCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR CCA 90 bp TTCACCAGGCAAAGCCCAACAGGGGTTGTGTGTTCAAAGCAAGTCTaGGAGCATGAACATGGTATGGACATGCTTAATTCTGAGAGGATC +
Preference number: 1 (lower is better)
Translates to: FTRQSPTGVVCSKQV*EHEHGMDMLNSERI
Trigger: GATCCTCTCAGAATTAAGCATGTCCATACCATGTTCATGCTCCCAGACTTGCTTTGAACACACAACCCCTGTTGGGCTTTGCCTGGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR GCA 90 bp AACCAATCCTATGCAAGCTTGGCTCTTGAGAGACTGGCATGCAATTaGAGAATCTGGAACAGCGAGACTTTGCACATCTTTAGGACAGTA +
Preference number: 1 (lower is better)
Translates to: NQSYASLALERLACN*RIWNSETLHIFRTV
Trigger: TACTGTCCTAAAGATGTGCAAAGTCTCGCTGTTCCAGATTCTGCAATTGCATGCCAGTCTCTCAAGAGCCAAGCTTGCATAGGATTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR CCA 90 bp TATGCAAGCTTGGCTCTTGAGAGACTGGCATGCAATTGCAGAATCTaGAACAGCGAGACTTTGCACATCTTTAGGACAGTAGCCATTTTG +
Preference number: 1 (lower is better)
Translates to: YASLALERLACNCRI*NSETLHIFRTVAIL
Trigger: CAAAATGGCTACTGTCCTAAAGATGTGCAAAGTCTCGCTGTTCCAGATTCTGCAATTGCATGCCAGTCTCTCAAGAGCCAAGCTTGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR TCA 90 bp TTTGTTATCACTGGACTCAGGTGTATAAAGCAAGGGTTTAAGGGGTaGGAGTTCAAGCCTGTCCAGGGAGAGACCTTATTTCAAAAGAAA +
Preference number: 1 (lower is better)
Translates to: FVITGLRCIKQGFKG*EFKPVQGETLFQKK
Trigger: TTTCTTTTGAAATAAGGTCTCTCCCTGGACAGGCTTGAACTCTCACCCCTTAAACCCTTGCTTTATACACCTGAGTCCAGTGATAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR TCA 90 bp CAGTGCAGGGGCTGTGCTTGTGAGAGTGGAGTGGAATATGAACTTTaGATTATGACATTCAGGGCCAATCCTGAACCTAAATTAATTTCA +
Preference number: 1 (lower is better)
Translates to: QCRGCACESGVEYEL*IMTFRANPEPKLIS
Trigger: TGAAATTAATTTAGGTTCAGGATTGGCCCTGAATGTCATAATTCAAAGTTCATATTCCACTCCACTCTCACAAGCACAGCCCCTGCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR TCA 90 bp GAAGACACCATTACGACATATATTTTACAAGGCAAAAGGATTCTGTaGCCATCTTTCCTTCAACGACTCACGGAAGCAATATGTGCAAAG +
Preference number: 1 (lower is better)
Translates to: EDTITTYILQGKRIL*PSFLQRLTEAICAK
Trigger: CTTTGCACATATTGCTTCCGTGAGTCGTTGAAGGAAAGATGGTCACAGAATCCTTTTGCCTTGTAAAATATATGTCGTAATGGTGTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR GCA 90 bp GGCACACACACAGCATTAAGATGTATTTTTGAGGTGACCAACAGCTaGATTTTATGGAGCTATTTACATGGAAGGTTTGTGAATTCTGTG +
Preference number: 1 (lower is better)
Translates to: GTHTALRCIFEVTNS*ILWSYLHGRFVNSV
Trigger: CACAGAATTCACAAACCTTCCATGTAAATAGCTCCATAAAATGCAGCTGTTGGTCACCTCAAAAATACATCTTAATGCTGTGTGTGTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR TCA 90 bp AGAAATATGTGGAACAGGCACACACACAGCATTAAGATGTATTTTTaGGGTGACCAACAGCTGCATTTTATGGAGCTATTTACATGGAAG +
Preference number: 1 (lower is better)
Translates to: RNMWNRHTHSIKMYF*GDQQLHFMELFTWK
Trigger: CTTCCATGTAAATAGCTCCATAAAATGCAGCTGTTGGTCACCTCAAAAATACATCTTAATGCTGTGTGTGTGCCTGTTCCACATATTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR CCA 90 bp ACAGCATTAAGATGTATTTTTGAGGTGACCAACAGCTGCATTTTATaGAGCTATTTACATGGAAGGTTTGTGAATTCTGTGGCTCTCAAG +
Preference number: 1 (lower is better)
Translates to: TALRCIFEVTNSCIL*SYLHGRFVNSVALK
Trigger: CTTGAGAGCCACAGAATTCACAAACCTTCCATGTAAATAGCTCCATAAAATGCAGCTGTTGGTCACCTCAAAAATACATCTTAATGCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR TCA 90 bp AGCCTGTCCAGGGAGAGACCTTATTTCAAAAGAAATACACAGTTATaGACCATAATCATTTCAGAGGCATTTCTTCTAAAGACAAGACAG +
Preference number: 1 (lower is better)
Translates to: SLSRERPYFKRNTQL*TIIISEAFLLKTRQ
Trigger: CTGTCTTGTCTTTAGAAGAAATGCCTCTGAAATGATTATGGTTCATAACTGTGTATTTCTTTTGAAATAAGGTCTCTCCCTGGACAGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR CAA 90 bp ATTTCCAGAGCTGGATCTGGGACTATTGGGATGGCAGGAGAAGGCTaGGTTCTGAGATTCACCAGGCAAAGCCCAACAGGGGTTGTGTGT +
Preference number: 2 (lower is better)
Translates to: ISRAGSGTIGMAGEG*VLRFTRQSPTGVVC
Trigger: ACACACAACCCCTGTTGGGCTTTGCCTGGTGAATCTCAGAACCAAGCCTTCTCCTGCCATCCCAATAGTCCCAGATCCAGCTCTGGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR-3UTR TCA 90 bp ATTGGGATGGCAGGAGAAGGCTTGGTTCTGAGATTCACCAGGCAAAGCCCAACAGCAAGTCTGGGAGCATaGACATGGTATGGACATGCT +
Preference number: 2 (lower is better)
Translates to: IGMAGEGLVLRFTRQSPTASLGA*TWYGHA
Trigger: AGCATGTCCATACCATGTTCATGCTCCCAGACTTGC...TGTTGGGCTTTGCCTGGTGAATCTCAGAACCAAGCCTTCTCCTGCCATCCCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR-3UTR TCA 90 bp GGGCTGAATTTCCAGAGCTGGATCTGGGACTATTGGGATGGCAGGAGAAGGCTTGGAGAAACCCTGTCTTaGAAAGCCAGAACAAGCAAA +
Preference number: 2 (lower is better)
Translates to: GLNFQSWIWDYWDGRRRLGETLS*KARTSK
Trigger: TTTGCTTGTTCTGGCTTTTCAAGACAGGGTTTCTCC...AAGCCTTCTCCTGCCATCCCAATAGTCCCAGATCCAGCTCTGGAAATTCAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR-3UTR TCA 90 bp GCAGCACTGTGGGTATGTGGGCTGAATTTCCAGAGCTGGATCTGGGACTATTGGTACATGGAAGGTTTGTaGATTCTGTGGCTCTCAAGT +
Preference number: 2 (lower is better)
Translates to: AALWVCGLNFQSWIWDYWYMEGL*ILWLSS
Trigger: ACTTGAGAGCCACAGAATTCACAAACCTTCCATGTA...CCAATAGTCCCAGATCCAGCTCTGGAAATTCAGCCCACATACCCACAGTGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR-3UTR TCA 90 bp GTAGTTCTCATCAGAGAACCTTCTTATAGAGCTAGTGGGTTTCAGGTGGGTCACTGTGGGTATGTGGGCTaGATTTCCAGAGCTGGATCT +
Preference number: 2 (lower is better)
Translates to: VVLIREPSYRASGFQVGHCGYVG*ISRAGS
Trigger: AGATCCAGCTCTGGAAATTCAGCCCACATACCCACA...GTGACCCACCTGAAACCCACTAGCTCTATAAGAAGGTTCTCTGATGAGAACTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR-3UTR TCA 90 bp TATGCAAGCTTGGCTCTTGAGAGACTGGCATGCAATTGCAGAATCTGGAACAGCGGCAAAAGGATTCTGTaGCCATCTTTCCTTCAACGA +
Preference number: 2 (lower is better)
Translates to: YASLALERLACNCRIWNSGKRIL*PSFLQR
Trigger: TCGTTGAAGGAAAGATGGTCACAGAATCCTTTTGCC...GCTGTTCCAGATTCTGCAATTGCATGCCAGTCTCTCAAGAGCCAAGCTTGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR-3UTR TCA 90 bp ATTGGGATGGCAGGAGAAGGCTTGGTTCTGAGATTCACCAGGCAAAGCCCAACAATGAACTTTGAATTATaGCATTCAGGGCCAATCCTG +
Preference number: 2 (lower is better)
Translates to: IGMAGEGLVLRFTRQSPTMNFEL*HSGPIL
Trigger: CAGGATTGGCCCTGAATGTCATAATTCAAAGTTCAT...TGTTGGGCTTTGCCTGGTGAATCTCAGAACCAAGCCTTCTCCTGCCATCCCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR-3UTR GCA 90 bp GTAGTTCTCATCAGAGAACCTTCTTATAGAGCTAGTGGGTTTCAGGTGGGTCACAGACTGGCATGCAATTaGAGAATCTGGAACAGCGAG +
Preference number: 2 (lower is better)
Translates to: VVLIREPSYRASGFQVGHRLACN*RIWNSE
Trigger: CTCGCTGTTCCAGATTCTGCAATTGCATGCCAGTCT...GTGACCCACCTGAAACCCACTAGCTCTATAAGAAGGTTCTCTGATGAGAACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR-3UTR TCA 90 bp TGTGTTCAAAGCAAGTCTGGGAGCATGAACATGGTATGGACATGCTTAATTCTGTGCAAGCTTGGCTCTTaGGAGACTGGCATGCAATTG +
Preference number: 2 (lower is better)
Translates to: CVQSKSGSMNMVWTCLILCKLGS*ETGMQL
Trigger: CAATTGCATGCCAGTCTCTCAAGAGCCAAGCTTGCA...CAGAATTAAGCATGTCCATACCATGTTCATGCTCCCAGACTTGCTTTGAACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR-3UTR CCA 90 bp TCATGTACAGCTGAGCCAAGTTACAGGAAGAGAAACGGAGAAGACACCATTACGATTGCCAGAAATATGTaGAACAGGCACACACACAGC +
Preference number: 2 (lower is better)
Translates to: SCTAEPSYRKRNGEDTITIARNM*NRHTHS
Trigger: GCTGTGTGTGTGCCTGTTCCACATATTTCTGGCAAT...CGTAATGGTGTCTTCTCCGTTTCTCTTCCTGTAACTTGGCTCAGCTGTACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR-3UTR CCA 90 bp GCAGCACTGTGGGTATGTGGGCTGAATTTCCAGAGCTGGATCTGGGACTATTGGAAGCATGTTTATGCATaGAAGAGAGCACAATTGAAA +
Preference number: 2 (lower is better)
Translates to: AALWVCGLNFQSWIWDYWKHVYA*KRAQLK
Trigger: TTTCAATTGTGCTCTCTTCCATGCATAAACATGCTT...CCAATAGTCCCAGATCCAGCTCTGGAAATTCAGCCCACATACCCACAGTGCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR-3UTR CCA 90 bp AACATGGTATGGACATGCTTAATTCTGAGAGGATCCATAAGGCAAAGGCAGTGCAGACCCATGATATCCTaGAAGTTGGGACTGAAAGCC +
Preference number: 2 (lower is better)
Translates to: NMVWTCLILRGSIRQRQCRPMIS*KLGLKA
Trigger: GGCTTTCAGTCCCAACTTCCAGGATATCATGGGTCT...GCACTGCCTTTGCCTTATGGATCCTCTCAGAATTAAGCATGTCCATACCATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR-3UTR GCA 90 bp GTAGTTCTCATCAGAGAACCTTCTTATAGAGCTAGTGGGTTTCAGGTGGGTCACCACGGAAGCAATATGTaGAAAGCATTGCTGATTTCC +
Preference number: 2 (lower is better)
Translates to: VVLIREPSYRASGFQVGHHGSNM*KALLIS
Trigger: GGAAATCAGCAATGCTTTGCACATATTGCTTCCGTG...GTGACCCACCTGAAACCCACTAGCTCTATAAGAAGGTTCTCTGATGAGAACTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR CAA 90 bp AGTAACTGGTTTAGAATAGAAACCAATCCTATGCAAGCTTGGCTCTaGAGAGACTGGCATGCAATTGCAGAATCTGGAACAGCGAGACTT +
Preference number: 2 (lower is better)
Translates to: SNWFRIETNPMQAWL*RDWHAIAESGTARL
Trigger: AAGTCTCGCTGTTCCAGATTCTGCAATTGCATGCCAGTCTCTCAAGAGCCAAGCTTGCATAGGATTGGTTTCTATTCTAAACCAGTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR-3UTR TCA 90 bp TCATGTACAGCTGAGCCAAGTTACAGGAAGAGAAACGGAGAAGACACCATTACGGATGTATTTTTGAGGTaGCCAACAGCTGCATTTTAT +
Preference number: 2 (lower is better)
Translates to: SCTAEPSYRKRNGEDTITDVFLR*PTAAFY
Trigger: ATAAAATGCAGCTGTTGGTCACCTCAAAAATACATC...CGTAATGGTGTCTTCTCCGTTTCTCTTCCTGTAACTTGGCTCAGCTGTACATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR-3UTR GCA 90 bp GTGTGTGTGTGTGTGTGCTTTTGTGATGTGAACTTCTTTCATTGGACATGTGTCGCTAAAGCATGTTTATaGATGGAAGAGAGCACAATT +
Preference number: 2 (lower is better)
Translates to: VCVCVCFCDVNFFHWTCVAKACL*MEESTI
Trigger: AATTGTGCTCTCTTCCATGCATAAACATGCTTTAGC...GACACATGTCCAATGAAAGAAGTTCACATCACAAAAGCACACACACACACACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR-3UTR CCA 90 bp GTGTGTGTGTGTGTGTGCTTTTGTGATGTGAACTTCTTTCATTGGACATGTGTCGAAAAACAGAAACATTaGCTTGAAAGTAGGTCATCG +
Preference number: 2 (lower is better)
Translates to: VCVCVCFCDVNFFHWTCVEKQKH*LESRSS
Trigger: CGATGACCTACTTTCAAGCCAATGTTTCTGTTTTTC...GACACATGTCCAATGAAAGAAGTTCACATCACAAAAGCACACACACACACACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR-3UTR CCA 90 bp TTTTGTCTGCTAAAGCATGTTTATGCATGGAAGAGAGCACAATTGAAACAGTATTTTAATACCAGTATTTaGAGGCAGAGGCAGGCAGAG +
Preference number: 2 (lower is better)
Translates to: FCLLKHVYAWKRAQLKQYFNTSI*RQRQAE
Trigger: CTCTGCCTGCCTCTGCCTCCAAATACTGGTATTAAA...ATACTGTTTCAATTGTGCTCTCTTCCATGCATAAACATGCTTTAGCAGACAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR-3UTR CCA 90 bp ATCATTTCAGAGGCATTTCTTCTAAAGACAAGACAGACCCATGATATCCTGGAAATGGAGCTATTTACATaGAAGGTTTGTGAATTCTGT +
Preference number: 2 (lower is better)
Translates to: IISEAFLLKTRQTHDILEMELFT*KVCEFC
Trigger: ACAGAATTCACAAACCTTCCATGTAAATAGCTCCAT...TTCCAGGATATCATGGGTCTGTCTTGTCTTTAGAAGAAATGCCTCTGAAATGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR-3UTR TCA 90 bp TTTTGTCTGCTAAAGCATGTTTATGCATGGAAGAGAGCACAATTGAAACAGTATATTAAGATGTATTTTTaGGGTGACCAACAGCTGCAT +
Preference number: 2 (lower is better)
Translates to: FCLLKHVYAWKRAQLKQYIKMYF*GDQQLH
Trigger: ATGCAGCTGTTGGTCACCTCAAAAATACATCTTAAT...ATACTGTTTCAATTGTGCTCTCTTCCATGCATAAACATGCTTTAGCAGACAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR CCA 72 bp GCAGCACTGTGGGTATGTGGGCTGAATTTCCAGAGCTaGATCTGGGACTATTGGGATGGCAGGAGAAGGCTT +
Preference number: 3 (lower is better)
Translates to: AALWVCGLNFQS*IWDYWDGRRRL
Trigger: AAGCCTTCTCCTGCCATCCCAATAGTCCCAGATCCAGCTCTGGAAATTCAGCCCACATACCCACAGTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR CCA 72 bp CTGTGGGTATGTGGGCTGAATTTCCAGAGCTGGATCTaGGACTATTGGGATGGCAGGAGAAGGCTTGGTTCT +
Preference number: 3 (lower is better)
Translates to: LWVCGLNFQSWI*DYWDGRRRLGS
Trigger: AGAACCAAGCCTTCTCCTGCCATCCCAATAGTCCCAGATCCAGCTCTGGAAATTCAGCCCACATACCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR-3UTR CAA 90 bp ATTGGGATGGCAGGAGAAGGCTTGGTTCTGAGATTCACCAGGCAAAGCCCAACAGGCAGCCAGGTCTCTTaGAGTTTTAGGCTAGCCTGT +
Preference number: 3 (lower is better)
Translates to: IGMAGEGLVLRFTRQSPTGSQVS*SFRLAC
Trigger: ACAGGCTAGCCTAAAACTCAAAGAGACCTGGCTGCC...TGTTGGGCTTTGCCTGGTGAATCTCAGAACCAAGCCTTCTCCTGCCATCCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR TCA 72 bp TTTTGTGATGTGAACTTCTTTCATTGGACATGTGTCTaGGGTGAGGCTGTAGCCTGCCTCAGGTTGGGCAGT +
Preference number: 3 (lower is better)
Translates to: FCDVNFFHWTCV*GEAVACLRLGS
Trigger: ACTGCCCAACCTGAGGCAGGCTACAGCCTCACCTCAGACACATGTCCAATGAAAGAAGTTCACATCACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR GCA 72 bp CAATCCTATGCAAGCTTGGCTCTTGAGAGACTGGCATaGAATTGCAGAATCTGGAACAGCGAGACTTTGCAC +
Preference number: 3 (lower is better)
Translates to: QSYASLALERLA*NCRIWNSETLH
Trigger: GTGCAAAGTCTCGCTGTTCCAGATTCTGCAATTGCATGCCAGTCTCTCAAGAGCCAAGCTTGCATAGGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR-3UTR CAA 90 bp GGGTTGTGTGTTCAAAGCAAGTCTGGGAGCATGAACATGGTATGGACATGCTTAATGATATCCTGGAAGTaGGGACTGAAAGCCTGCAAG +
Preference number: 3 (lower is better)
Translates to: GLCVQSKSGSMNMVWTCLMISWK*GLKACK
Trigger: CTTGCAGGCTTTCAGTCCCAACTTCCAGGATATCAT...TAAGCATGTCCATACCATGTTCATGCTCCCAGACTTGCTTTGAACACACAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR-3UTR CAA 90 bp TGTGTTCAAAGCAAGTCTGGGAGCATGAACATGGTATGGACATGCTTAATTCTGCAATCCTATGCAAGCTaGGCTCTTGAGAGACTGGCA +
Preference number: 3 (lower is better)
Translates to: CVQSKSGSMNMVWTCLILQSYAS*ALERLA
Trigger: TGCCAGTCTCTCAAGAGCCAAGCTTGCATAGGATTG...CAGAATTAAGCATGTCCATACCATGTTCATGCTCCCAGACTTGCTTTGAACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR GCA 72 bp TATGCAAGCTTGGCTCTTGAGAGACTGGCATGCAATTaGAGAATCTGGAACAGCGAGACTTTGCACATCTTT +
Preference number: 3 (lower is better)
Translates to: YASLALERLACN*RIWNSETLHIF
Trigger: AAAGATGTGCAAAGTCTCGCTGTTCCAGATTCTGCAATTGCATGCCAGTCTCTCAAGAGCCAAGCTTGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR GCA 72 bp CAAAGCAAGTCTGGGAGCATGAACATGGTATGGACATaGTTAATTCTGAGAGGATCCATAAGGCAAAGGCAG +
Preference number: 3 (lower is better)
Translates to: QSKSGSMNMVWT*LILRGSIRQRQ
Trigger: CTGCCTTTGCCTTATGGATCCTCTCAGAATTAAGCATGTCCATACCATGTTCATGCTCCCAGACTTGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR CCA 72 bp TTGGCTCTTGAGAGACTGGCATGCAATTGCAGAATCTaGAACAGCGAGACTTTGCACATCTTTAGGACAGTA +
Preference number: 3 (lower is better)
Translates to: LALERLACNCRI*NSETLHIFRTV
Trigger: TACTGTCCTAAAGATGTGCAAAGTCTCGCTGTTCCAGATTCTGCAATTGCATGCCAGTCTCTCAAGAGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR CCA 72 bp CAAAGCCCAACAGGGGTTGTGTGTTCAAAGCAAGTCTaGGAGCATGAACATGGTATGGACATGCTTAATTCT +
Preference number: 3 (lower is better)
Translates to: QSPTGVVCSKQV*EHEHGMDMLNS
Trigger: AGAATTAAGCATGTCCATACCATGTTCATGCTCCCAGACTTGCTTTGAACACACAACCCCTGTTGGGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR-3UTR CAA 90 bp GTGTGTGTGTGTGTGTGCTTTTGTGATGTGAACTTCTTTCATTGGACATGTGTCCGGAGAAACCCTGTCTaGAAAAGCCAGAACAAGCAA +
Preference number: 3 (lower is better)
Translates to: VCVCVCFCDVNFFHWTCVRRNPV*KSQNKQ
Trigger: TTGCTTGTTCTGGCTTTTCAAGACAGGGTTTCTCCG...GACACATGTCCAATGAAAGAAGTTCACATCACAAAAGCACACACACACACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR CCA 72 bp TCAGAGAACCTTCTTATAGAGCTAGTGGGTTTCAGGTaGGTCACGCTATCTTGTCCTTTCATGTTTGTGTGT +
Preference number: 3 (lower is better)
Translates to: SENLLIELVGFR*VTLSCPFMFVC
Trigger: ACACACAAACATGAAAGGACAAGATAGCGTGACCCACCTGAAACCCACTAGCTCTATAAGAAGGTTCTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR CCA 72 bp TGTGTTCAAAGCAAGTCTGGGAGCATGAACATGGTATaGACATGCTTAATTCTGAGAGGATCCATAAGGCAA +
Preference number: 3 (lower is better)
Translates to: CVQSKSGSMNMV*TCLILRGSIRQ
Trigger: TTGCCTTATGGATCCTCTCAGAATTAAGCATGTCCATACCATGTTCATGCTCCCAGACTTGCTTTGAACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR CCA 72 bp AACTGGTTTAGAATAGAAACCAATCCTATGCAAGCTTaGCTCTTGAGAGACTGGCATGCAATTGCAGAATCT +
Preference number: 3 (lower is better)
Translates to: NWFRIETNPMQA*LLRDWHAIAES
Trigger: AGATTCTGCAATTGCATGCCAGTCTCTCAAGAGCCAAGCTTGCATAGGATTGGTTTCTATTCTAAACCAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR TCA 72 bp ATTACGACATATATTTTACAAGGCAAAAGGATTCTGTaGCCATCTTTCCTTCAACGACTCACGGAAGCAATA +
Preference number: 3 (lower is better)
Translates to: ITTYILQGKRIL*PSFLQRLTEAI
Trigger: TATTGCTTCCGTGAGTCGTTGAAGGAAAGATGGTCACAGAATCCTTTTGCCTTGTAAAATATATGTCGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR GCA 72 bp ACAGCATTAAGATGTATTTTTGAGGTGACCAACAGCTaGATTTTATGGAGCTATTTACATGGAAGGTTTGTG +
Preference number: 3 (lower is better)
Translates to: TALRCIFEVTNS*ILWSYLHGRFV
Trigger: CACAAACCTTCCATGTAAATAGCTCCATAAAATGCAGCTGTTGGTCACCTCAAAAATACATCTTAATGCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR GCA 72 bp ACCATCTTTCCTTCAACGACTCACGGAAGCAATATGTaGAAAGCATTGCTGATTTCCACTAATATTTTCAAA +
Preference number: 3 (lower is better)
Translates to: TIFPSTTHGSNM*KALLISTNIFK
Trigger: TTTGAAAATATTAGTGGAAATCAGCAATGCTTTGCACATATTGCTTCCGTGAGTCGTTGAAGGAAAGATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
CDS-3UTR CCA 90 bp GGGCTGAATTTCCAGAGCTGGATCTGGGACTATTGGGATGGCAGGAGAAGGCTTAGTCTGCCCAGGTGCTaGACAGCAGGAAATCCCTCC +
Preference number: 4 (lower is better)
Translates to: GLNFQSWIWDYWDGRRRLSLPRC*TAGNPS
Trigger: GGAGGGATTTCCTGCTGTCCAGCACCTGGGCAGACT...AAGCCTTCTCCTGCCATCCCAATAGTCCCAGATCCAGCTCTGGAAATTCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
3UTR CAA 72 bp GCTGGATCTGGGACTATTGGGATGGCAGGAGAAGGCTaGGTTCTGAGATTCACCAGGCAAAGCCCAACAGGG +
Preference number: 4 (lower is better)
Translates to: AGSGTIGMAGEG*VLRFTRQSPTG
Trigger: CCCTGTTGGGCTTTGCCTGGTGAATCTCAGAACCAAGCCTTCTCCTGCCATCCCAATAGTCCCAGATCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
CDS-3UTR TCA 90 bp GCAGCACTGTGGGTATGTGGGCTGAATTTCCAGAGCTGGATCTGGGACTATTGGTGCCAGCAGGTTCAGTaGGAAGAGAAGTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: AALWVCGLNFQSWIWDYWCQQVQ*EEKSAQ
Trigger: CTGGGCAGACTTCTCTTCTCACTGAACCTGCTGGCA...CCAATAGTCCCAGATCCAGCTCTGGAAATTCAGCCCACATACCCACAGTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
CDS-3UTR TCA 90 bp ATTGGGATGGCAGGAGAAGGCTTGGTTCTGAGATTCACCAGGCAAAGCCCAACAGACGATGAGGTGGGATaGGCAGGTGGAAAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: IGMAGEGLVLRFTRQSPTDDEVG*AGGKSS
Trigger: AGAGCTTTTTCCACCTGCTCATCCCACCTCATCGTC...TGTTGGGCTTTGCCTGGTGAATCTCAGAACCAAGCCTTCTCCTGCCATCCCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
CDS-3UTR TCA 90 bp TATGCAAGCTTGGCTCTTGAGAGACTGGCATGCAATTGCAGAATCTGGAACAGCGTCTCCCTCAGAGCCTaGTGGACCTGCTTGTTACGC +
Preference number: 4 (lower is better)
Translates to: YASLALERLACNCRIWNSVSLRA*WTCLLR
Trigger: GCGTAACAAGCAGGTCCATCAGGCTCTGAGGGAGAC...GCTGTTCCAGATTCTGCAATTGCATGCCAGTCTCTCAAGAGCCAAGCTTGCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
CDS-3UTR CCA 90 bp ATTGGGATGGCAGGAGAAGGCTTGGTTCTGAGATTCACCAGGCAAAGCCCAACAGGTGGGATGAGCAGGTaGAAAAAGCTCTCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: IGMAGEGLVLRFTRQSPTGGMSR*KKLSVS
Trigger: AGAGACAGAGAGCTTTTTCCACCTGCTCATCCCACC...TGTTGGGCTTTGCCTGGTGAATCTCAGAACCAAGCCTTCTCCTGCCATCCCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
CDS-3UTR GCA 90 bp GGAACAGGCACACACACAGCATTAAGATGTATTTTTGAGGTGACCAACAGCTGCAGAAGTCTGCCCAGGTaGTGGACAGCAGGAAATCCC +
Preference number: 4 (lower is better)
Translates to: GTGTHTALRCIFEVTNSCRSLPR*WTAGNP
Trigger: GGGATTTCCTGCTGTCCAGCACCTGGGCAGACTTCT...GCAGCTGTTGGTCACCTCAAAAATACATCTTAATGCTGTGTGTGTGCCTGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
CDS-3UTR CCA 90 bp GTAGTTCTCATCAGAGAACCTTCTTATAGAGCTAGTGGGTTTCAGGTGGGTCACTCCAGGGTAAATTCCTaGACAGTTGTCCCGTTTCCC +
Preference number: 4 (lower is better)
Translates to: VVLIREPSYRASGFQVGHSRVNS*TVVPFP
Trigger: GGGAAACGGGACAACTGTCCAGGAATTTACCCTGGA...GTGACCCACCTGAAACCCACTAGCTCTATAAGAAGGTTCTCTGATGAGAACTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
CDS-3UTR TCA 90 bp GGAACAGGCACACACACAGCATTAAGATGTATTTTTGAGGTGACCAACAGCTGCTACACACCTGTCCACTaGCATCACAGCTATGAGAAA +
Preference number: 4 (lower is better)
Translates to: GTGTHTALRCIFEVTNSCYTPVH*HHSYEK
Trigger: TTTCTCATAGCTGTGATGTCAGTGGACAGGTGTGTA...GCAGCTGTTGGTCACCTCAAAAATACATCTTAATGCTGTGTGTGTGCCTGTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
CDS-3UTR GCA 90 bp GGAACAGGCACACACACAGCATTAAGATGTATTTTTGAGGTGACCAACAGCTGCGGTTGGATTCAAGCCTaGTCATTTGCTTCGGTTTCA +
Preference number: 4 (lower is better)
Translates to: GTGTHTALRCIFEVTNSCGWIQA*SFASVS
Trigger: TGAAACCGAAGCAAATGAGCAGGCTTGAATCCAACC...GCAGCTGTTGGTCACCTCAAAAATACATCTTAATGCTGTGTGTGTGCCTGTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
CDS-3UTR CCA 90 bp GTGTGTGTGTGTGTGTGCTTTTGTGATGTGAACTTCTTTCATTGGACATGTGTCTCTCTCCTTAGCCGATaGGAGACGCACAATTGTGAT +
Preference number: 4 (lower is better)
Translates to: VCVCVCFCDVNFFHWTCVSLLSR*ETHNCD
Trigger: ATCACAATTGTGCGTCTCCCATCGGCTAAGGAGAGA...GACACATGTCCAATGAAAGAAGTTCACATCACAAAAGCACACACACACACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
CDS-3UTR GCA 90 bp TATGCAAGCTTGGCTCTTGAGAGACTGGCATGCAATTGCAGAATCTGGAACAGCTCAAGCCTGCTCATTTaGTTCGGTTTCACATATATA +
Preference number: 4 (lower is better)
Translates to: YASLALERLACNCRIWNSSSLLI*FGFTYI
Trigger: TATATATGTGAAACCGAAGCAAATGAGCAGGCTTGA...GCTGTTCCAGATTCTGCAATTGCATGCCAGTCTCTCAAGAGCCAAGCTTGCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
CDS-3UTR GCA 90 bp TTTAGAATAGAAACCAATCCTATGCAAGCTTGGCTCTTGAGAGACTGGCATGCACTGATATTTTTATTCTaGTCAGAGTCTCCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: FRIETNPMQAWLLRDWHALIFLF*SESPSE
Trigger: CTCTGAGGGAGACTCTGAGCAGAATAAAAATATCAG...TGCATGCCAGTCTCTCAAGAGCCAAGCTTGCATAGGATTGGTTTCTATTCTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
CDS-3UTR CCA 90 bp AACAAGCAAACAAAAATAAGATTGCCAGAAATATGTGGAACAGGCACACACACACGAGGAAAAAGTACATaGGGCTTTTCAGACGGGTAC +
Preference number: 4 (lower is better)
Translates to: NKQTKIRLPEICGTGTHTRGKST*GFSDGY
Trigger: GTACCCGTCTGAAAAGCCCCATGTACTTTTTCCTCG...TGTGTGTGTGCCTGTTCCACATATTTCTGGCAATCTTATTTTTGTTTGCTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
CDS-3UTR CCA 90 bp AAGACACCATTACGACATATATTTTACAAGGCAAAAGGATTCTGTGACCATCTTGAGCTTCAGCAGAACTaGTGTCAGAGCAAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: KTPLRHIFYKAKGFCDHLELQQN*CQSKRG
Trigger: ACCTCTCTTGCTCTGACACCAGTTCTGCTGAAGCTC...AAGATGGTCACAGAATCCTTTTGCCTTGTAAAATATATGTCGTAATGGTGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
CDS TCA 90 bp GACGACATTTCCGGTGATGGAGGCCAGGTATGCCAGCAGGTTCAGTaGGAAGAGAAGTCTGCCCAGGTGCTGGACAGCAGGAAATCCCTC +
Preference number: 5 (lower is better)
Translates to: DDISGDGGQVCQQVQ*EEKSAQVLDSRKSL
Trigger: GAGGGATTTCCTGCTGTCCAGCACCTGGGCAGACTTCTCTTCTCACTGAACCTGCTGGCATACCTGGCCTCCATCACCGGAAATGTCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
CDS CCA 90 bp AGGTATGCCAGCAGGTTCAGTGAGAAGAGAAGTCTGCCCAGGTGCTaGACAGCAGGAAATCCCTCCAGGGTAAATTCCTGGACAGTTGTC +
Preference number: 5 (lower is better)
Translates to: RYASRFSEKRSLPRC*TAGNPSRVNSWTVV
Trigger: GACAACTGTCCAGGAATTTACCCTGGAGGGATTTCCTGCTGTCCAGCACCTGGGCAGACTTCTCTTCTCACTGAACCTGCTGGCATACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
CDS-3UTR CAA 90 bp TTTTGTCTGCTAAAGCATGTTTATGCATGGAAGAGAGCACAATTGAAACAGTATTTCAAGCCTGCTCATTaGCTTCGGTTTCACATATAT +
Preference number: 5 (lower is better)
Translates to: FCLLKHVYAWKRAQLKQYFKPAH*LRFHIY
Trigger: ATATATGTGAAACCGAAGCAAATGAGCAGGCTTGAA...ATACTGTTTCAATTGTGCTCTCTTCCATGCATAAACATGCTTTAGCAGACAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
CDS TCA 72 bp TCCGGTGATGGAGGCCAGGTATGCCAGCAGGTTCAGTaGGAAGAGAAGTCTGCCCAGGTGCTGGACAGCAGG +
Preference number: 6 (lower is better)
Translates to: SGDGGQVCQQVQ*EEKSAQVLDSR
Trigger: CCTGCTGTCCAGCACCTGGGCAGACTTCTCTTCTCACTGAACCTGCTGGCATACCTGGCCTCCATCACCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
CDS CCA 72 bp AGCAGGTTCAGTGAGAAGAGAAGTCTGCCCAGGTGCTaGACAGCAGGAAATCCCTCCAGGGTAAATTCCTGG +
Preference number: 6 (lower is better)
Translates to: SRFSEKRSLPRC*TAGNPSRVNSW
Trigger: CCAGGAATTTACCCTGGAGGGATTTCCTGCTGTCCAGCACCTGGGCAGACTTCTCTTCTCACTGAACCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
CDS CAA 72 bp GGCGTCACTACCGTGTTCACAAGAGCAGCCTCTCGGTaGGATTCAAGCCTGCTCATTTGCTTCGGTTTCACA +
Preference number: 6 (lower is better)
Translates to: GVTTVFTRAASR*DSSLLICFGFT
Trigger: TGTGAAACCGAAGCAAATGAGCAGGCTTGAATCCAACCGAGAGGCTGCTCTTGTGAACACGGTAGTGACGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
CDS CCA 72 bp GCGTCACTACCGTGTTCACAAGAGCAGCCTCTCGGTTaGATTCAAGCCTGCTCATTTGCTTCGGTTTCACAT +
Preference number: 6 (lower is better)
Translates to: ASLPCSQEQPLG*IQACSFASVSH
Trigger: ATGTGAAACCGAAGCAAATGAGCAGGCTTGAATCCAACCGAGAGGCTGCTCTTGTGAACACGGTAGTGACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
CDS CCA 72 bp GCAGGTGGAAAAAGCTCTCTGTCTCTCCTTAGCCGATaGGAGACGCACAATTGTGATGACTATGTTGCTGTA +
Preference number: 6 (lower is better)
Translates to: AGGKSSLSLLSR*ETHNCDDYVAV
Trigger: TACAGCAACATAGTCATCACAATTGTGCGTCTCCCATCGGCTAAGGAGAGACAGAGAGCTTTTTCCACCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
CDS CAA 90 bp TTCAGAAGCGGCGTCACTACCGTGTTCACAAGAGCAGCCTCTCGGTaGGATTCAAGCCTGCTCATTTGCTTCGGTTTCACATATATAAAC +
Preference number: 6 (lower is better)
Translates to: FRSGVTTVFTRAASR*DSSLLICFGFTYIN
Trigger: GTTTATATATGTGAAACCGAAGCAAATGAGCAGGCTTGAATCCAACCGAGAGGCTGCTCTTGTGAACACGGTAGTGACGCCGCTTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
CDS GCA 72 bp AGAGCAGCCTCTCGGTTGGATTCAAGCCTGCTCATTTaGTTCGGTTTCACATATATAAACACACAGCTGCCA +
Preference number: 6 (lower is better)
Translates to: RAASRLDSSLLI*FGFTYINTQLP
Trigger: TGGCAGCTGTGTGTTTATATATGTGAAACCGAAGCAAATGAGCAGGCTTGAATCCAACCGAGAGGCTGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6
CDS CAA 72 bp AAGAGCAGCCTCTCGGTTGGATTCAAGCCTGCTCATTaGCTTCGGTTTCACATATATAAACACACAGCTGCC +
Preference number: 6 (lower is better)
Translates to: KSSLSVGFKPAH*LRFHIYKHTAA
Trigger: GGCAGCTGTGTGTTTATATATGTGAAACCGAAGCAAATGAGCAGGCTTGAATCCAACCGAGAGGCTGCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061723.6