Pregenerated sensors for OLFR215 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050654Ensembl transcript IDs: ENSMUST00000061723.6
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGGCAGCACTGTGGGTATGTGGGCTGAATTTCCAGAGCTGGATCTaGGACTATTGGGATGGCAGGAGAAGGCTTGGTTCTGAGATTCAC | + |
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Preference number: 1 (lower is better) Translates to: LAALWVCGLNFQSWI*DYWDGRRRLGSEIH Trigger: GTGAATCTCAGAACCAAGCCTTCTCCTGCCATCCCAATAGTCCCAGATCCAGCTCTGGAAATTCAGCCCACATACCCACAGTGCTGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR CCA 90 bp | CTGTGGGTATGTGGGCTGAATTTCCAGAGCTGGATCTGGGACTATTaGGATGGCAGGAGAAGGCTTGGTTCTGAGATTCACCAGGCAAAG | + |
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Preference number: 1 (lower is better) Translates to: LWVCGLNFQSWIWDY*DGRRRLGSEIHQAK Trigger: CTTTGCCTGGTGAATCTCAGAACCAAGCCTTCTCCTGCCATCCCAATAGTCCCAGATCCAGCTCTGGAAATTCAGCCCACATACCCACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR TCA 90 bp | TGTGTGTGCTTTTGTGATGTGAACTTCTTTCATTGGACATGTGTCTaGGGTGAGGCTGTAGCCTGCCTCAGGTTGGGCAGTAACCCATGT | + |
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Preference number: 1 (lower is better) Translates to: CVCFCDVNFFHWTCV*GEAVACLRLGSNPC Trigger: ACATGGGTTACTGCCCAACCTGAGGCAGGCTACAGCCTCACCTCAGACACATGTCCAATGAAAGAAGTTCACATCACAAAAGCACACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR GCA 90 bp | TTGTGTGTTCAAAGCAAGTCTGGGAGCATGAACATGGTATGGACATaGTTAATTCTGAGAGGATCCATAAGGCAAAGGCAGTGCAGGGGC | + |
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Preference number: 1 (lower is better) Translates to: LCVQSKSGSMNMVWT*LILRGSIRQRQCRG Trigger: GCCCCTGCACTGCCTTTGCCTTATGGATCCTCTCAGAATTAAGCATGTCCATACCATGTTCATGCTCCCAGACTTGCTTTGAACACACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR CCA 90 bp | CAGGGGTTGTGTGTTCAAAGCAAGTCTGGGAGCATGAACATGGTATaGACATGCTTAATTCTGAGAGGATCCATAAGGCAAAGGCAGTGC | + |
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Preference number: 1 (lower is better) Translates to: QGLCVQSKSGSMNMV*TCLILRGSIRQRQC Trigger: GCACTGCCTTTGCCTTATGGATCCTCTCAGAATTAAGCATGTCCATACCATGTTCATGCTCCCAGACTTGCTTTGAACACACAACCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR CCA 90 bp | TTCACCAGGCAAAGCCCAACAGGGGTTGTGTGTTCAAAGCAAGTCTaGGAGCATGAACATGGTATGGACATGCTTAATTCTGAGAGGATC | + |
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Preference number: 1 (lower is better) Translates to: FTRQSPTGVVCSKQV*EHEHGMDMLNSERI Trigger: GATCCTCTCAGAATTAAGCATGTCCATACCATGTTCATGCTCCCAGACTTGCTTTGAACACACAACCCCTGTTGGGCTTTGCCTGGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR GCA 90 bp | AACCAATCCTATGCAAGCTTGGCTCTTGAGAGACTGGCATGCAATTaGAGAATCTGGAACAGCGAGACTTTGCACATCTTTAGGACAGTA | + |
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Preference number: 1 (lower is better) Translates to: NQSYASLALERLACN*RIWNSETLHIFRTV Trigger: TACTGTCCTAAAGATGTGCAAAGTCTCGCTGTTCCAGATTCTGCAATTGCATGCCAGTCTCTCAAGAGCCAAGCTTGCATAGGATTGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR CCA 90 bp | TATGCAAGCTTGGCTCTTGAGAGACTGGCATGCAATTGCAGAATCTaGAACAGCGAGACTTTGCACATCTTTAGGACAGTAGCCATTTTG | + |
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Preference number: 1 (lower is better) Translates to: YASLALERLACNCRI*NSETLHIFRTVAIL Trigger: CAAAATGGCTACTGTCCTAAAGATGTGCAAAGTCTCGCTGTTCCAGATTCTGCAATTGCATGCCAGTCTCTCAAGAGCCAAGCTTGCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR TCA 90 bp | TTTGTTATCACTGGACTCAGGTGTATAAAGCAAGGGTTTAAGGGGTaGGAGTTCAAGCCTGTCCAGGGAGAGACCTTATTTCAAAAGAAA | + |
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Preference number: 1 (lower is better) Translates to: FVITGLRCIKQGFKG*EFKPVQGETLFQKK Trigger: TTTCTTTTGAAATAAGGTCTCTCCCTGGACAGGCTTGAACTCTCACCCCTTAAACCCTTGCTTTATACACCTGAGTCCAGTGATAACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR TCA 90 bp | CAGTGCAGGGGCTGTGCTTGTGAGAGTGGAGTGGAATATGAACTTTaGATTATGACATTCAGGGCCAATCCTGAACCTAAATTAATTTCA | + |
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Preference number: 1 (lower is better) Translates to: QCRGCACESGVEYEL*IMTFRANPEPKLIS Trigger: TGAAATTAATTTAGGTTCAGGATTGGCCCTGAATGTCATAATTCAAAGTTCATATTCCACTCCACTCTCACAAGCACAGCCCCTGCACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR TCA 90 bp | GAAGACACCATTACGACATATATTTTACAAGGCAAAAGGATTCTGTaGCCATCTTTCCTTCAACGACTCACGGAAGCAATATGTGCAAAG | + |
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Preference number: 1 (lower is better) Translates to: EDTITTYILQGKRIL*PSFLQRLTEAICAK Trigger: CTTTGCACATATTGCTTCCGTGAGTCGTTGAAGGAAAGATGGTCACAGAATCCTTTTGCCTTGTAAAATATATGTCGTAATGGTGTCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR GCA 90 bp | GGCACACACACAGCATTAAGATGTATTTTTGAGGTGACCAACAGCTaGATTTTATGGAGCTATTTACATGGAAGGTTTGTGAATTCTGTG | + |
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Preference number: 1 (lower is better) Translates to: GTHTALRCIFEVTNS*ILWSYLHGRFVNSV Trigger: CACAGAATTCACAAACCTTCCATGTAAATAGCTCCATAAAATGCAGCTGTTGGTCACCTCAAAAATACATCTTAATGCTGTGTGTGTGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR TCA 90 bp | AGAAATATGTGGAACAGGCACACACACAGCATTAAGATGTATTTTTaGGGTGACCAACAGCTGCATTTTATGGAGCTATTTACATGGAAG | + |
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Preference number: 1 (lower is better) Translates to: RNMWNRHTHSIKMYF*GDQQLHFMELFTWK Trigger: CTTCCATGTAAATAGCTCCATAAAATGCAGCTGTTGGTCACCTCAAAAATACATCTTAATGCTGTGTGTGTGCCTGTTCCACATATTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR CCA 90 bp | ACAGCATTAAGATGTATTTTTGAGGTGACCAACAGCTGCATTTTATaGAGCTATTTACATGGAAGGTTTGTGAATTCTGTGGCTCTCAAG | + |
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Preference number: 1 (lower is better) Translates to: TALRCIFEVTNSCIL*SYLHGRFVNSVALK Trigger: CTTGAGAGCCACAGAATTCACAAACCTTCCATGTAAATAGCTCCATAAAATGCAGCTGTTGGTCACCTCAAAAATACATCTTAATGCTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR TCA 90 bp | AGCCTGTCCAGGGAGAGACCTTATTTCAAAAGAAATACACAGTTATaGACCATAATCATTTCAGAGGCATTTCTTCTAAAGACAAGACAG | + |
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Preference number: 1 (lower is better) Translates to: SLSRERPYFKRNTQL*TIIISEAFLLKTRQ Trigger: CTGTCTTGTCTTTAGAAGAAATGCCTCTGAAATGATTATGGTTCATAACTGTGTATTTCTTTTGAAATAAGGTCTCTCCCTGGACAGGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR CAA 90 bp | ATTTCCAGAGCTGGATCTGGGACTATTGGGATGGCAGGAGAAGGCTaGGTTCTGAGATTCACCAGGCAAAGCCCAACAGGGGTTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: ISRAGSGTIGMAGEG*VLRFTRQSPTGVVC Trigger: ACACACAACCCCTGTTGGGCTTTGCCTGGTGAATCTCAGAACCAAGCCTTCTCCTGCCATCCCAATAGTCCCAGATCCAGCTCTGGAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR-3UTR TCA 90 bp | ATTGGGATGGCAGGAGAAGGCTTGGTTCTGAGATTCACCAGGCAAAGCCCAACAGCAAGTCTGGGAGCATaGACATGGTATGGACATGCT | + |
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Preference number: 2 (lower is better) Translates to: IGMAGEGLVLRFTRQSPTASLGA*TWYGHA Trigger: AGCATGTCCATACCATGTTCATGCTCCCAGACTTGC...TGTTGGGCTTTGCCTGGTGAATCTCAGAACCAAGCCTTCTCCTGCCATCCCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR-3UTR TCA 90 bp | GGGCTGAATTTCCAGAGCTGGATCTGGGACTATTGGGATGGCAGGAGAAGGCTTGGAGAAACCCTGTCTTaGAAAGCCAGAACAAGCAAA | + |
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Preference number: 2 (lower is better) Translates to: GLNFQSWIWDYWDGRRRLGETLS*KARTSK Trigger: TTTGCTTGTTCTGGCTTTTCAAGACAGGGTTTCTCC...AAGCCTTCTCCTGCCATCCCAATAGTCCCAGATCCAGCTCTGGAAATTCAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR-3UTR TCA 90 bp | GCAGCACTGTGGGTATGTGGGCTGAATTTCCAGAGCTGGATCTGGGACTATTGGTACATGGAAGGTTTGTaGATTCTGTGGCTCTCAAGT | + |
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Preference number: 2 (lower is better) Translates to: AALWVCGLNFQSWIWDYWYMEGL*ILWLSS Trigger: ACTTGAGAGCCACAGAATTCACAAACCTTCCATGTA...CCAATAGTCCCAGATCCAGCTCTGGAAATTCAGCCCACATACCCACAGTGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR-3UTR TCA 90 bp | GTAGTTCTCATCAGAGAACCTTCTTATAGAGCTAGTGGGTTTCAGGTGGGTCACTGTGGGTATGTGGGCTaGATTTCCAGAGCTGGATCT | + |
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Preference number: 2 (lower is better) Translates to: VVLIREPSYRASGFQVGHCGYVG*ISRAGS Trigger: AGATCCAGCTCTGGAAATTCAGCCCACATACCCACA...GTGACCCACCTGAAACCCACTAGCTCTATAAGAAGGTTCTCTGATGAGAACTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR-3UTR TCA 90 bp | TATGCAAGCTTGGCTCTTGAGAGACTGGCATGCAATTGCAGAATCTGGAACAGCGGCAAAAGGATTCTGTaGCCATCTTTCCTTCAACGA | + |
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Preference number: 2 (lower is better) Translates to: YASLALERLACNCRIWNSGKRIL*PSFLQR Trigger: TCGTTGAAGGAAAGATGGTCACAGAATCCTTTTGCC...GCTGTTCCAGATTCTGCAATTGCATGCCAGTCTCTCAAGAGCCAAGCTTGCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR-3UTR TCA 90 bp | ATTGGGATGGCAGGAGAAGGCTTGGTTCTGAGATTCACCAGGCAAAGCCCAACAATGAACTTTGAATTATaGCATTCAGGGCCAATCCTG | + |
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Preference number: 2 (lower is better) Translates to: IGMAGEGLVLRFTRQSPTMNFEL*HSGPIL Trigger: CAGGATTGGCCCTGAATGTCATAATTCAAAGTTCAT...TGTTGGGCTTTGCCTGGTGAATCTCAGAACCAAGCCTTCTCCTGCCATCCCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR-3UTR GCA 90 bp | GTAGTTCTCATCAGAGAACCTTCTTATAGAGCTAGTGGGTTTCAGGTGGGTCACAGACTGGCATGCAATTaGAGAATCTGGAACAGCGAG | + |
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Preference number: 2 (lower is better) Translates to: VVLIREPSYRASGFQVGHRLACN*RIWNSE Trigger: CTCGCTGTTCCAGATTCTGCAATTGCATGCCAGTCT...GTGACCCACCTGAAACCCACTAGCTCTATAAGAAGGTTCTCTGATGAGAACTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR-3UTR TCA 90 bp | TGTGTTCAAAGCAAGTCTGGGAGCATGAACATGGTATGGACATGCTTAATTCTGTGCAAGCTTGGCTCTTaGGAGACTGGCATGCAATTG | + |
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Preference number: 2 (lower is better) Translates to: CVQSKSGSMNMVWTCLILCKLGS*ETGMQL Trigger: CAATTGCATGCCAGTCTCTCAAGAGCCAAGCTTGCA...CAGAATTAAGCATGTCCATACCATGTTCATGCTCCCAGACTTGCTTTGAACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR-3UTR CCA 90 bp | TCATGTACAGCTGAGCCAAGTTACAGGAAGAGAAACGGAGAAGACACCATTACGATTGCCAGAAATATGTaGAACAGGCACACACACAGC | + |
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Preference number: 2 (lower is better) Translates to: SCTAEPSYRKRNGEDTITIARNM*NRHTHS Trigger: GCTGTGTGTGTGCCTGTTCCACATATTTCTGGCAAT...CGTAATGGTGTCTTCTCCGTTTCTCTTCCTGTAACTTGGCTCAGCTGTACATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR-3UTR CCA 90 bp | GCAGCACTGTGGGTATGTGGGCTGAATTTCCAGAGCTGGATCTGGGACTATTGGAAGCATGTTTATGCATaGAAGAGAGCACAATTGAAA | + |
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Preference number: 2 (lower is better) Translates to: AALWVCGLNFQSWIWDYWKHVYA*KRAQLK Trigger: TTTCAATTGTGCTCTCTTCCATGCATAAACATGCTT...CCAATAGTCCCAGATCCAGCTCTGGAAATTCAGCCCACATACCCACAGTGCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR-3UTR CCA 90 bp | AACATGGTATGGACATGCTTAATTCTGAGAGGATCCATAAGGCAAAGGCAGTGCAGACCCATGATATCCTaGAAGTTGGGACTGAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: NMVWTCLILRGSIRQRQCRPMIS*KLGLKA Trigger: GGCTTTCAGTCCCAACTTCCAGGATATCATGGGTCT...GCACTGCCTTTGCCTTATGGATCCTCTCAGAATTAAGCATGTCCATACCATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR-3UTR GCA 90 bp | GTAGTTCTCATCAGAGAACCTTCTTATAGAGCTAGTGGGTTTCAGGTGGGTCACCACGGAAGCAATATGTaGAAAGCATTGCTGATTTCC | + |
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Preference number: 2 (lower is better) Translates to: VVLIREPSYRASGFQVGHHGSNM*KALLIS Trigger: GGAAATCAGCAATGCTTTGCACATATTGCTTCCGTG...GTGACCCACCTGAAACCCACTAGCTCTATAAGAAGGTTCTCTGATGAGAACTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR CAA 90 bp | AGTAACTGGTTTAGAATAGAAACCAATCCTATGCAAGCTTGGCTCTaGAGAGACTGGCATGCAATTGCAGAATCTGGAACAGCGAGACTT | + |
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Preference number: 2 (lower is better) Translates to: SNWFRIETNPMQAWL*RDWHAIAESGTARL Trigger: AAGTCTCGCTGTTCCAGATTCTGCAATTGCATGCCAGTCTCTCAAGAGCCAAGCTTGCATAGGATTGGTTTCTATTCTAAACCAGTTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR-3UTR TCA 90 bp | TCATGTACAGCTGAGCCAAGTTACAGGAAGAGAAACGGAGAAGACACCATTACGGATGTATTTTTGAGGTaGCCAACAGCTGCATTTTAT | + |
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Preference number: 2 (lower is better) Translates to: SCTAEPSYRKRNGEDTITDVFLR*PTAAFY Trigger: ATAAAATGCAGCTGTTGGTCACCTCAAAAATACATC...CGTAATGGTGTCTTCTCCGTTTCTCTTCCTGTAACTTGGCTCAGCTGTACATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGCTTTTGTGATGTGAACTTCTTTCATTGGACATGTGTCGCTAAAGCATGTTTATaGATGGAAGAGAGCACAATT | + |
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Preference number: 2 (lower is better) Translates to: VCVCVCFCDVNFFHWTCVAKACL*MEESTI Trigger: AATTGTGCTCTCTTCCATGCATAAACATGCTTTAGC...GACACATGTCCAATGAAAGAAGTTCACATCACAAAAGCACACACACACACACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGCTTTTGTGATGTGAACTTCTTTCATTGGACATGTGTCGAAAAACAGAAACATTaGCTTGAAAGTAGGTCATCG | + |
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Preference number: 2 (lower is better) Translates to: VCVCVCFCDVNFFHWTCVEKQKH*LESRSS Trigger: CGATGACCTACTTTCAAGCCAATGTTTCTGTTTTTC...GACACATGTCCAATGAAAGAAGTTCACATCACAAAAGCACACACACACACACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR-3UTR CCA 90 bp | TTTTGTCTGCTAAAGCATGTTTATGCATGGAAGAGAGCACAATTGAAACAGTATTTTAATACCAGTATTTaGAGGCAGAGGCAGGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: FCLLKHVYAWKRAQLKQYFNTSI*RQRQAE Trigger: CTCTGCCTGCCTCTGCCTCCAAATACTGGTATTAAA...ATACTGTTTCAATTGTGCTCTCTTCCATGCATAAACATGCTTTAGCAGACAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR-3UTR CCA 90 bp | ATCATTTCAGAGGCATTTCTTCTAAAGACAAGACAGACCCATGATATCCTGGAAATGGAGCTATTTACATaGAAGGTTTGTGAATTCTGT | + |
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Preference number: 2 (lower is better) Translates to: IISEAFLLKTRQTHDILEMELFT*KVCEFC Trigger: ACAGAATTCACAAACCTTCCATGTAAATAGCTCCAT...TTCCAGGATATCATGGGTCTGTCTTGTCTTTAGAAGAAATGCCTCTGAAATGAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR-3UTR TCA 90 bp | TTTTGTCTGCTAAAGCATGTTTATGCATGGAAGAGAGCACAATTGAAACAGTATATTAAGATGTATTTTTaGGGTGACCAACAGCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: FCLLKHVYAWKRAQLKQYIKMYF*GDQQLH Trigger: ATGCAGCTGTTGGTCACCTCAAAAATACATCTTAAT...ATACTGTTTCAATTGTGCTCTCTTCCATGCATAAACATGCTTTAGCAGACAAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR CCA 72 bp | GCAGCACTGTGGGTATGTGGGCTGAATTTCCAGAGCTaGATCTGGGACTATTGGGATGGCAGGAGAAGGCTT | + |
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Preference number: 3 (lower is better) Translates to: AALWVCGLNFQS*IWDYWDGRRRL Trigger: AAGCCTTCTCCTGCCATCCCAATAGTCCCAGATCCAGCTCTGGAAATTCAGCCCACATACCCACAGTGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR CCA 72 bp | CTGTGGGTATGTGGGCTGAATTTCCAGAGCTGGATCTaGGACTATTGGGATGGCAGGAGAAGGCTTGGTTCT | + |
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Preference number: 3 (lower is better) Translates to: LWVCGLNFQSWI*DYWDGRRRLGS Trigger: AGAACCAAGCCTTCTCCTGCCATCCCAATAGTCCCAGATCCAGCTCTGGAAATTCAGCCCACATACCCACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR-3UTR CAA 90 bp | ATTGGGATGGCAGGAGAAGGCTTGGTTCTGAGATTCACCAGGCAAAGCCCAACAGGCAGCCAGGTCTCTTaGAGTTTTAGGCTAGCCTGT | + |
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Preference number: 3 (lower is better) Translates to: IGMAGEGLVLRFTRQSPTGSQVS*SFRLAC Trigger: ACAGGCTAGCCTAAAACTCAAAGAGACCTGGCTGCC...TGTTGGGCTTTGCCTGGTGAATCTCAGAACCAAGCCTTCTCCTGCCATCCCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR TCA 72 bp | TTTTGTGATGTGAACTTCTTTCATTGGACATGTGTCTaGGGTGAGGCTGTAGCCTGCCTCAGGTTGGGCAGT | + |
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Preference number: 3 (lower is better) Translates to: FCDVNFFHWTCV*GEAVACLRLGS Trigger: ACTGCCCAACCTGAGGCAGGCTACAGCCTCACCTCAGACACATGTCCAATGAAAGAAGTTCACATCACAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR GCA 72 bp | CAATCCTATGCAAGCTTGGCTCTTGAGAGACTGGCATaGAATTGCAGAATCTGGAACAGCGAGACTTTGCAC | + |
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Preference number: 3 (lower is better) Translates to: QSYASLALERLA*NCRIWNSETLH Trigger: GTGCAAAGTCTCGCTGTTCCAGATTCTGCAATTGCATGCCAGTCTCTCAAGAGCCAAGCTTGCATAGGATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR-3UTR CAA 90 bp | GGGTTGTGTGTTCAAAGCAAGTCTGGGAGCATGAACATGGTATGGACATGCTTAATGATATCCTGGAAGTaGGGACTGAAAGCCTGCAAG | + |
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Preference number: 3 (lower is better) Translates to: GLCVQSKSGSMNMVWTCLMISWK*GLKACK Trigger: CTTGCAGGCTTTCAGTCCCAACTTCCAGGATATCAT...TAAGCATGTCCATACCATGTTCATGCTCCCAGACTTGCTTTGAACACACAACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR-3UTR CAA 90 bp | TGTGTTCAAAGCAAGTCTGGGAGCATGAACATGGTATGGACATGCTTAATTCTGCAATCCTATGCAAGCTaGGCTCTTGAGAGACTGGCA | + |
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Preference number: 3 (lower is better) Translates to: CVQSKSGSMNMVWTCLILQSYAS*ALERLA Trigger: TGCCAGTCTCTCAAGAGCCAAGCTTGCATAGGATTG...CAGAATTAAGCATGTCCATACCATGTTCATGCTCCCAGACTTGCTTTGAACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR GCA 72 bp | TATGCAAGCTTGGCTCTTGAGAGACTGGCATGCAATTaGAGAATCTGGAACAGCGAGACTTTGCACATCTTT | + |
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Preference number: 3 (lower is better) Translates to: YASLALERLACN*RIWNSETLHIF Trigger: AAAGATGTGCAAAGTCTCGCTGTTCCAGATTCTGCAATTGCATGCCAGTCTCTCAAGAGCCAAGCTTGCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR GCA 72 bp | CAAAGCAAGTCTGGGAGCATGAACATGGTATGGACATaGTTAATTCTGAGAGGATCCATAAGGCAAAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: QSKSGSMNMVWT*LILRGSIRQRQ Trigger: CTGCCTTTGCCTTATGGATCCTCTCAGAATTAAGCATGTCCATACCATGTTCATGCTCCCAGACTTGCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR CCA 72 bp | TTGGCTCTTGAGAGACTGGCATGCAATTGCAGAATCTaGAACAGCGAGACTTTGCACATCTTTAGGACAGTA | + |
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Preference number: 3 (lower is better) Translates to: LALERLACNCRI*NSETLHIFRTV Trigger: TACTGTCCTAAAGATGTGCAAAGTCTCGCTGTTCCAGATTCTGCAATTGCATGCCAGTCTCTCAAGAGCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR CCA 72 bp | CAAAGCCCAACAGGGGTTGTGTGTTCAAAGCAAGTCTaGGAGCATGAACATGGTATGGACATGCTTAATTCT | + |
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Preference number: 3 (lower is better) Translates to: QSPTGVVCSKQV*EHEHGMDMLNS Trigger: AGAATTAAGCATGTCCATACCATGTTCATGCTCCCAGACTTGCTTTGAACACACAACCCCTGTTGGGCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGCTTTTGTGATGTGAACTTCTTTCATTGGACATGTGTCCGGAGAAACCCTGTCTaGAAAAGCCAGAACAAGCAA | + |
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Preference number: 3 (lower is better) Translates to: VCVCVCFCDVNFFHWTCVRRNPV*KSQNKQ Trigger: TTGCTTGTTCTGGCTTTTCAAGACAGGGTTTCTCCG...GACACATGTCCAATGAAAGAAGTTCACATCACAAAAGCACACACACACACACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR CCA 72 bp | TCAGAGAACCTTCTTATAGAGCTAGTGGGTTTCAGGTaGGTCACGCTATCTTGTCCTTTCATGTTTGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: SENLLIELVGFR*VTLSCPFMFVC Trigger: ACACACAAACATGAAAGGACAAGATAGCGTGACCCACCTGAAACCCACTAGCTCTATAAGAAGGTTCTCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR CCA 72 bp | TGTGTTCAAAGCAAGTCTGGGAGCATGAACATGGTATaGACATGCTTAATTCTGAGAGGATCCATAAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: CVQSKSGSMNMV*TCLILRGSIRQ Trigger: TTGCCTTATGGATCCTCTCAGAATTAAGCATGTCCATACCATGTTCATGCTCCCAGACTTGCTTTGAACACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR CCA 72 bp | AACTGGTTTAGAATAGAAACCAATCCTATGCAAGCTTaGCTCTTGAGAGACTGGCATGCAATTGCAGAATCT | + |
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Preference number: 3 (lower is better) Translates to: NWFRIETNPMQA*LLRDWHAIAES Trigger: AGATTCTGCAATTGCATGCCAGTCTCTCAAGAGCCAAGCTTGCATAGGATTGGTTTCTATTCTAAACCAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR TCA 72 bp | ATTACGACATATATTTTACAAGGCAAAAGGATTCTGTaGCCATCTTTCCTTCAACGACTCACGGAAGCAATA | + |
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Preference number: 3 (lower is better) Translates to: ITTYILQGKRIL*PSFLQRLTEAI Trigger: TATTGCTTCCGTGAGTCGTTGAAGGAAAGATGGTCACAGAATCCTTTTGCCTTGTAAAATATATGTCGTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR GCA 72 bp | ACAGCATTAAGATGTATTTTTGAGGTGACCAACAGCTaGATTTTATGGAGCTATTTACATGGAAGGTTTGTG | + |
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Preference number: 3 (lower is better) Translates to: TALRCIFEVTNS*ILWSYLHGRFV Trigger: CACAAACCTTCCATGTAAATAGCTCCATAAAATGCAGCTGTTGGTCACCTCAAAAATACATCTTAATGCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR GCA 72 bp | ACCATCTTTCCTTCAACGACTCACGGAAGCAATATGTaGAAAGCATTGCTGATTTCCACTAATATTTTCAAA | + |
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Preference number: 3 (lower is better) Translates to: TIFPSTTHGSNM*KALLISTNIFK Trigger: TTTGAAAATATTAGTGGAAATCAGCAATGCTTTGCACATATTGCTTCCGTGAGTCGTTGAAGGAAAGATGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| CDS-3UTR CCA 90 bp | GGGCTGAATTTCCAGAGCTGGATCTGGGACTATTGGGATGGCAGGAGAAGGCTTAGTCTGCCCAGGTGCTaGACAGCAGGAAATCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: GLNFQSWIWDYWDGRRRLSLPRC*TAGNPS Trigger: GGAGGGATTTCCTGCTGTCCAGCACCTGGGCAGACT...AAGCCTTCTCCTGCCATCCCAATAGTCCCAGATCCAGCTCTGGAAATTCAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| 3UTR CAA 72 bp | GCTGGATCTGGGACTATTGGGATGGCAGGAGAAGGCTaGGTTCTGAGATTCACCAGGCAAAGCCCAACAGGG | + |
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Preference number: 4 (lower is better) Translates to: AGSGTIGMAGEG*VLRFTRQSPTG Trigger: CCCTGTTGGGCTTTGCCTGGTGAATCTCAGAACCAAGCCTTCTCCTGCCATCCCAATAGTCCCAGATCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| CDS-3UTR TCA 90 bp | GCAGCACTGTGGGTATGTGGGCTGAATTTCCAGAGCTGGATCTGGGACTATTGGTGCCAGCAGGTTCAGTaGGAAGAGAAGTCTGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: AALWVCGLNFQSWIWDYWCQQVQ*EEKSAQ Trigger: CTGGGCAGACTTCTCTTCTCACTGAACCTGCTGGCA...CCAATAGTCCCAGATCCAGCTCTGGAAATTCAGCCCACATACCCACAGTGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| CDS-3UTR TCA 90 bp | ATTGGGATGGCAGGAGAAGGCTTGGTTCTGAGATTCACCAGGCAAAGCCCAACAGACGATGAGGTGGGATaGGCAGGTGGAAAAAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: IGMAGEGLVLRFTRQSPTDDEVG*AGGKSS Trigger: AGAGCTTTTTCCACCTGCTCATCCCACCTCATCGTC...TGTTGGGCTTTGCCTGGTGAATCTCAGAACCAAGCCTTCTCCTGCCATCCCAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| CDS-3UTR TCA 90 bp | TATGCAAGCTTGGCTCTTGAGAGACTGGCATGCAATTGCAGAATCTGGAACAGCGTCTCCCTCAGAGCCTaGTGGACCTGCTTGTTACGC | + |
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Preference number: 4 (lower is better) Translates to: YASLALERLACNCRIWNSVSLRA*WTCLLR Trigger: GCGTAACAAGCAGGTCCATCAGGCTCTGAGGGAGAC...GCTGTTCCAGATTCTGCAATTGCATGCCAGTCTCTCAAGAGCCAAGCTTGCATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| CDS-3UTR CCA 90 bp | ATTGGGATGGCAGGAGAAGGCTTGGTTCTGAGATTCACCAGGCAAAGCCCAACAGGTGGGATGAGCAGGTaGAAAAAGCTCTCTGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: IGMAGEGLVLRFTRQSPTGGMSR*KKLSVS Trigger: AGAGACAGAGAGCTTTTTCCACCTGCTCATCCCACC...TGTTGGGCTTTGCCTGGTGAATCTCAGAACCAAGCCTTCTCCTGCCATCCCAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| CDS-3UTR GCA 90 bp | GGAACAGGCACACACACAGCATTAAGATGTATTTTTGAGGTGACCAACAGCTGCAGAAGTCTGCCCAGGTaGTGGACAGCAGGAAATCCC | + |
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Preference number: 4 (lower is better) Translates to: GTGTHTALRCIFEVTNSCRSLPR*WTAGNP Trigger: GGGATTTCCTGCTGTCCAGCACCTGGGCAGACTTCT...GCAGCTGTTGGTCACCTCAAAAATACATCTTAATGCTGTGTGTGTGCCTGTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| CDS-3UTR CCA 90 bp | GTAGTTCTCATCAGAGAACCTTCTTATAGAGCTAGTGGGTTTCAGGTGGGTCACTCCAGGGTAAATTCCTaGACAGTTGTCCCGTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: VVLIREPSYRASGFQVGHSRVNS*TVVPFP Trigger: GGGAAACGGGACAACTGTCCAGGAATTTACCCTGGA...GTGACCCACCTGAAACCCACTAGCTCTATAAGAAGGTTCTCTGATGAGAACTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| CDS-3UTR TCA 90 bp | GGAACAGGCACACACACAGCATTAAGATGTATTTTTGAGGTGACCAACAGCTGCTACACACCTGTCCACTaGCATCACAGCTATGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: GTGTHTALRCIFEVTNSCYTPVH*HHSYEK Trigger: TTTCTCATAGCTGTGATGTCAGTGGACAGGTGTGTA...GCAGCTGTTGGTCACCTCAAAAATACATCTTAATGCTGTGTGTGTGCCTGTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| CDS-3UTR GCA 90 bp | GGAACAGGCACACACACAGCATTAAGATGTATTTTTGAGGTGACCAACAGCTGCGGTTGGATTCAAGCCTaGTCATTTGCTTCGGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: GTGTHTALRCIFEVTNSCGWIQA*SFASVS Trigger: TGAAACCGAAGCAAATGAGCAGGCTTGAATCCAACC...GCAGCTGTTGGTCACCTCAAAAATACATCTTAATGCTGTGTGTGTGCCTGTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGCTTTTGTGATGTGAACTTCTTTCATTGGACATGTGTCTCTCTCCTTAGCCGATaGGAGACGCACAATTGTGAT | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCFCDVNFFHWTCVSLLSR*ETHNCD Trigger: ATCACAATTGTGCGTCTCCCATCGGCTAAGGAGAGA...GACACATGTCCAATGAAAGAAGTTCACATCACAAAAGCACACACACACACACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| CDS-3UTR GCA 90 bp | TATGCAAGCTTGGCTCTTGAGAGACTGGCATGCAATTGCAGAATCTGGAACAGCTCAAGCCTGCTCATTTaGTTCGGTTTCACATATATA | + |
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Preference number: 4 (lower is better) Translates to: YASLALERLACNCRIWNSSSLLI*FGFTYI Trigger: TATATATGTGAAACCGAAGCAAATGAGCAGGCTTGA...GCTGTTCCAGATTCTGCAATTGCATGCCAGTCTCTCAAGAGCCAAGCTTGCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| CDS-3UTR GCA 90 bp | TTTAGAATAGAAACCAATCCTATGCAAGCTTGGCTCTTGAGAGACTGGCATGCACTGATATTTTTATTCTaGTCAGAGTCTCCCTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: FRIETNPMQAWLLRDWHALIFLF*SESPSE Trigger: CTCTGAGGGAGACTCTGAGCAGAATAAAAATATCAG...TGCATGCCAGTCTCTCAAGAGCCAAGCTTGCATAGGATTGGTTTCTATTCTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| CDS-3UTR CCA 90 bp | AACAAGCAAACAAAAATAAGATTGCCAGAAATATGTGGAACAGGCACACACACACGAGGAAAAAGTACATaGGGCTTTTCAGACGGGTAC | + |
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Preference number: 4 (lower is better) Translates to: NKQTKIRLPEICGTGTHTRGKST*GFSDGY Trigger: GTACCCGTCTGAAAAGCCCCATGTACTTTTTCCTCG...TGTGTGTGTGCCTGTTCCACATATTTCTGGCAATCTTATTTTTGTTTGCTTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| CDS-3UTR CCA 90 bp | AAGACACCATTACGACATATATTTTACAAGGCAAAAGGATTCTGTGACCATCTTGAGCTTCAGCAGAACTaGTGTCAGAGCAAGAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: KTPLRHIFYKAKGFCDHLELQQN*CQSKRG Trigger: ACCTCTCTTGCTCTGACACCAGTTCTGCTGAAGCTC...AAGATGGTCACAGAATCCTTTTGCCTTGTAAAATATATGTCGTAATGGTGTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| CDS TCA 90 bp | GACGACATTTCCGGTGATGGAGGCCAGGTATGCCAGCAGGTTCAGTaGGAAGAGAAGTCTGCCCAGGTGCTGGACAGCAGGAAATCCCTC | + |
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Preference number: 5 (lower is better) Translates to: DDISGDGGQVCQQVQ*EEKSAQVLDSRKSL Trigger: GAGGGATTTCCTGCTGTCCAGCACCTGGGCAGACTTCTCTTCTCACTGAACCTGCTGGCATACCTGGCCTCCATCACCGGAAATGTCGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| CDS CCA 90 bp | AGGTATGCCAGCAGGTTCAGTGAGAAGAGAAGTCTGCCCAGGTGCTaGACAGCAGGAAATCCCTCCAGGGTAAATTCCTGGACAGTTGTC | + |
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Preference number: 5 (lower is better) Translates to: RYASRFSEKRSLPRC*TAGNPSRVNSWTVV Trigger: GACAACTGTCCAGGAATTTACCCTGGAGGGATTTCCTGCTGTCCAGCACCTGGGCAGACTTCTCTTCTCACTGAACCTGCTGGCATACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| CDS-3UTR CAA 90 bp | TTTTGTCTGCTAAAGCATGTTTATGCATGGAAGAGAGCACAATTGAAACAGTATTTCAAGCCTGCTCATTaGCTTCGGTTTCACATATAT | + |
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Preference number: 5 (lower is better) Translates to: FCLLKHVYAWKRAQLKQYFKPAH*LRFHIY Trigger: ATATATGTGAAACCGAAGCAAATGAGCAGGCTTGAA...ATACTGTTTCAATTGTGCTCTCTTCCATGCATAAACATGCTTTAGCAGACAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| CDS TCA 72 bp | TCCGGTGATGGAGGCCAGGTATGCCAGCAGGTTCAGTaGGAAGAGAAGTCTGCCCAGGTGCTGGACAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SGDGGQVCQQVQ*EEKSAQVLDSR Trigger: CCTGCTGTCCAGCACCTGGGCAGACTTCTCTTCTCACTGAACCTGCTGGCATACCTGGCCTCCATCACCGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| CDS CCA 72 bp | AGCAGGTTCAGTGAGAAGAGAAGTCTGCCCAGGTGCTaGACAGCAGGAAATCCCTCCAGGGTAAATTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SRFSEKRSLPRC*TAGNPSRVNSW Trigger: CCAGGAATTTACCCTGGAGGGATTTCCTGCTGTCCAGCACCTGGGCAGACTTCTCTTCTCACTGAACCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| CDS CAA 72 bp | GGCGTCACTACCGTGTTCACAAGAGCAGCCTCTCGGTaGGATTCAAGCCTGCTCATTTGCTTCGGTTTCACA | + |
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Preference number: 6 (lower is better) Translates to: GVTTVFTRAASR*DSSLLICFGFT Trigger: TGTGAAACCGAAGCAAATGAGCAGGCTTGAATCCAACCGAGAGGCTGCTCTTGTGAACACGGTAGTGACGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| CDS CCA 72 bp | GCGTCACTACCGTGTTCACAAGAGCAGCCTCTCGGTTaGATTCAAGCCTGCTCATTTGCTTCGGTTTCACAT | + |
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Preference number: 6 (lower is better) Translates to: ASLPCSQEQPLG*IQACSFASVSH Trigger: ATGTGAAACCGAAGCAAATGAGCAGGCTTGAATCCAACCGAGAGGCTGCTCTTGTGAACACGGTAGTGACGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| CDS CCA 72 bp | GCAGGTGGAAAAAGCTCTCTGTCTCTCCTTAGCCGATaGGAGACGCACAATTGTGATGACTATGTTGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: AGGKSSLSLLSR*ETHNCDDYVAV Trigger: TACAGCAACATAGTCATCACAATTGTGCGTCTCCCATCGGCTAAGGAGAGACAGAGAGCTTTTTCCACCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| CDS CAA 90 bp | TTCAGAAGCGGCGTCACTACCGTGTTCACAAGAGCAGCCTCTCGGTaGGATTCAAGCCTGCTCATTTGCTTCGGTTTCACATATATAAAC | + |
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Preference number: 6 (lower is better) Translates to: FRSGVTTVFTRAASR*DSSLLICFGFTYIN Trigger: GTTTATATATGTGAAACCGAAGCAAATGAGCAGGCTTGAATCCAACCGAGAGGCTGCTCTTGTGAACACGGTAGTGACGCCGCTTCTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| CDS GCA 72 bp | AGAGCAGCCTCTCGGTTGGATTCAAGCCTGCTCATTTaGTTCGGTTTCACATATATAAACACACAGCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: RAASRLDSSLLI*FGFTYINTQLP Trigger: TGGCAGCTGTGTGTTTATATATGTGAAACCGAAGCAAATGAGCAGGCTTGAATCCAACCGAGAGGCTGCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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| CDS CAA 72 bp | AAGAGCAGCCTCTCGGTTGGATTCAAGCCTGCTCATTaGCTTCGGTTTCACATATATAAACACACAGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: KSSLSVGFKPAH*LRFHIYKHTAA Trigger: GGCAGCTGTGTGTTTATATATGTGAAACCGAAGCAAATGAGCAGGCTTGAATCCAACCGAGAGGCTGCTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061723.6 |
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