Pregenerated sensors for OLFR212 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053251Ensembl transcript IDs: ENSMUST00000075756.3, ENSMUST00000218028.2, ENSMUST00000220134.2
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAAGGCGAGAGCTTGAAATTGGAATGGCAAAAGGCTGTTGCTTGCTaGCTTACAGCTATGGTCACAGTCAGCTGCATTTCCCAGACAGCC | + |
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Preference number: 1 (lower is better) Translates to: QGESLKLEWQKAVAC*LTAMVTVSCISQTA Trigger: GGCTGTCTGGGAAATGCAGCTGACTGTGACCATAGCTGTAAGCCAGCAAGCAACAGCCTTTTGCCATTCCAATTTCAAGCTCTCGCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| 3UTR GCA 90 bp | ACACAAGGCGAGAGCTTGAAATTGGAATGGCAAAAGGCTGTTGCTTaGTGGCTTACAGCTATGGTCACAGTCAGCTGCATTTCCCAGACA | + |
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Preference number: 1 (lower is better) Translates to: TQGESLKLEWQKAVA*WLTAMVTVSCISQT Trigger: TGTCTGGGAAATGCAGCTGACTGTGACCATAGCTGTAAGCCAGCAAGCAACAGCCTTTTGCCATTCCAATTTCAAGCTCTCGCCTTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| 3UTR CCA 90 bp | AGAAAAGACAGGGAAAGAACACAAGGCGAGAGCTTGAAATTGGAATaGCAAAAGGCTGTTGCTTGCTGGCTTACAGCTATGGTCACAGTC | + |
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Preference number: 1 (lower is better) Translates to: RKDRERTQGESLKLE*QKAVACWLTAMVTV Trigger: GACTGTGACCATAGCTGTAAGCCAGCAAGCAACAGCCTTTTGCCATTCCAATTTCAAGCTCTCGCCTTGTGTTCTTTCCCTGTCTTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| 3UTR TCA 90 bp | ACAACTCAAGCCCCTCTTGTTCCTCCATCACTAAAAGAGGATCCCTaGAATCAGACCAAAGCCACACATCAAATAAATGAATGGATAATT | + |
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Preference number: 1 (lower is better) Translates to: TTQAPLVPPSLKEDP*NQTKATHQINEWII Trigger: AATTATCCATTCATTTATTTGATGTGTGGCTTTGGTCTGATTTCAGGGATCCTCTTTTAGTGATGGAGGAACAAGAGGGGCTTGAGTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| 3UTR GCA 90 bp | TTATTTGCATTTCATTGGCATGGAGACCAACATAAAACTCTAGTCTaGTTAACAATCCATAATTCCTGTGGCCTTTTGTTGATTCTTGCA | + |
|
Preference number: 1 (lower is better) Translates to: LFAFHWHGDQHKTLV*LTIHNSCGLLLILA Trigger: TGCAAGAATCAACAAAAGGCCACAGGAATTATGGATTGTTAAGCAGACTAGAGTTTTATGTTGGTCTCCATGCCAATGAAATGCAAATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| 3UTR CCA 90 bp | TCTTTCATCTCTGAGGAAATTTCTCCTGAATTATTTGCATTTCATTaGCATGGAGACCAACATAAAACTCTAGTCTGCTTAACAATCCAT | + |
|
Preference number: 1 (lower is better) Translates to: SFISEEISPELFAFH*HGDQHKTLVCLTIH Trigger: ATGGATTGTTAAGCAGACTAGAGTTTTATGTTGGTCTCCATGCCAATGAAATGCAAATAATTCAGGAGAAATTTCCTCAGAGATGAAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| 3UTR CAA 90 bp | AACACAAGGCGAGAGCTTGAAATTGGAATGGCAAAAGGCTGTTGCTaGCTGGCTTACAGCTATGGTCACAGTCAGCTGCATTTCCCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: NTRRELEIGMAKGCC*LAYSYGHSQLHFPD Trigger: GTCTGGGAAATGCAGCTGACTGTGACCATAGCTGTAAGCCAGCAAGCAACAGCCTTTTGCCATTCCAATTTCAAGCTCTCGCCTTGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| 3UTR-3UTR TCA 90 bp | GGAATGGCAAAAGGCTGTTGCTTGCTGGCTTACAGCTATGGTCACAGTCAGCTGATTCAGCTTGGCTCATaGCACATGTTTGATCAATAC | + |
|
Preference number: 2 (lower is better) Translates to: GMAKGCCLLAYSYGHSQLIQLGS*HMFDQY Trigger: GTATTGATCAAACATGTGTCATGAGCCAAGCTGAAT...CAGCTGACTGTGACCATAGCTGTAAGCCAGCAAGCAACAGCCTTTTGCCATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| 3UTR-3UTR TCA 90 bp | GGAATGGCAAAAGGCTGTTGCTTGCTGGCTTACAGCTATGGTCACAGTCAGCTGCAACAATTAGGAAAATaGTTCGCAGTCTTACACACA | + |
|
Preference number: 2 (lower is better) Translates to: GMAKGCCLLAYSYGHSQLQQLGK*FAVLHT Trigger: TGTGTGTAAGACTGCGAATCATTTTCCTAATTGTTG...CAGCTGACTGTGACCATAGCTGTAAGCCAGCAAGCAACAGCCTTTTGCCATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| 3UTR CAA 90 bp | AGGCCATCTGATGGTAGCCATTCCTCAACTGAGGGTCAGGTCAAATaGACAGGAAAACTAAGCAGGACAAAGGTGTTTTCCTTCTTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: RPSDGSHSSTEGQVK*TGKLSRTKVFSFLF Trigger: AAACAAGAAGGAAAACACCTTTGTCCTGCTTAGTTTTCCTGTCAATTTGACCTGACCCTCAGTTGAGGAATGGCTACCATCAGATGGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| 3UTR-3UTR GCA 90 bp | TCAACTGAGGGTCAGGTCAAATTGACAGGAAAACTAAGCAGGACAAAGGTGTTTGGGGTTAAGAGTGAATaGAACCTGGTAAAGGAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: STEGQVKLTGKLSRTKVFGVKSE*NLVKES Trigger: TGACTCCTTTACCAGGTTGCATTCACTCTTAACCCC...AAACACCTTTGTCCTGCTTAGTTTTCCTGTCAATTTGACCTGACCCTCAGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| 3UTR-3UTR TCA 90 bp | CATTTTGTCTTAGTGCTAACGTGGATGTCTGACCTTGTCCATAAATTCATCTCACTAAAAGAGGATCCCTaGAATCAGACCAAAGCCACA | + |
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Preference number: 2 (lower is better) Translates to: HFVLVLTWMSDLVHKFISLKEDP*NQTKAT Trigger: TGTGGCTTTGGTCTGATTTCAGGGATCCTCTTTTAG...TGAGATGAATTTATGGACAAGGTCAGACATCCACGTTAGCACTAAGACAAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| 3UTR-3UTR TCA 90 bp | CATTTTGTCTTAGTGCTAACGTGGATGTCTGACCTTGTCCATAAATTCATCTCACCTGTGGCCTTTTGTTaGTTCTTGCATTTAGGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: HFVLVLTWMSDLVHKFISPVAFC*FLHLGV Trigger: AACCCCTAAATGCAAGAATCAACAAAAGGCCACAGG...TGAGATGAATTTATGGACAAGGTCAGACATCCACGTTAGCACTAAGACAAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| 3UTR-3UTR GCA 90 bp | TCAACTGAGGGTCAGGTCAAATTGACAGGAAAACTAAGCAGGACAAAGGTGTTTGGATACATCAACCATTaGTGTAGTAACAAACCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: STEGQVKLTGKLSRTKVFGYINH*CSNKPA Trigger: TGCTGGTTTGTTACTACAGCAATGGTTGATGTATCC...AAACACCTTTGTCCTGCTTAGTTTTCCTGTCAATTTGACCTGACCCTCAGTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| 3UTR-3UTR TCA 90 bp | TACATTCATTTTGTCTTAGTGCTAACGTGGATGTCTGACCTTGTCCATAAATTCCCTGTGGCCTTTTGTTaGTTCTTGCATTTAGGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: YIHFVLVLTWMSDLVHKFPVAFC*FLHLGV Trigger: AACCCCTAAATGCAAGAATCAACAAAAGGCCACAGG...GAATTTATGGACAAGGTCAGACATCCACGTTAGCACTAAGACAAAATGAATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| 3UTR-3UTR GCA 90 bp | TACATTCATTTTGTCTTAGTGCTAACGTGGATGTCTGACCTTGTCCATAAATTCGGGGTTAAGAGTGAATaGAACCTGGTAAAGGAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: YIHFVLVLTWMSDLVHKFGVKSE*NLVKES Trigger: TGACTCCTTTACCAGGTTGCATTCACTCTTAACCCC...GAATTTATGGACAAGGTCAGACATCCACGTTAGCACTAAGACAAAATGAATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGGTCAAATTGACAGGAAAACTAAGCAGGACAAAGGTGTTTTCCTTCTTGTTTGGTACTCATTAGTTTaGTTCACCATTCACAACTCA | + |
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Preference number: 2 (lower is better) Translates to: SGQIDRKTKQDKGVFLLVWYSLV*FTIHNS Trigger: TGAGTTGTGAATGGTGAATCAAACTAATGAGTACCA...AACAAGAAGGAAAACACCTTTGTCCTGCTTAGTTTTCCTGTCAATTTGACCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| 3UTR-3UTR GCA 90 bp | TACATTCATTTTGTCTTAGTGCTAACGTGGATGTCTGACCTTGTCCATAAATTCGGATACATCAACCATTaGTGTAGTAACAAACCAGCA | + |
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Preference number: 2 (lower is better) Translates to: YIHFVLVLTWMSDLVHKFGYINH*CSNKPA Trigger: TGCTGGTTTGTTACTACAGCAATGGTTGATGTATCC...GAATTTATGGACAAGGTCAGACATCCACGTTAGCACTAAGACAAAATGAATGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| 3UTR-3UTR TCA 90 bp | TACATTCATTTTGTCTTAGTGCTAACGTGGATGTCTGACCTTGTCCATAAATTCTGGTACTCATTAGTTTaGTTCACCATTCACAACTCA | + |
|
Preference number: 2 (lower is better) Translates to: YIHFVLVLTWMSDLVHKFWYSLV*FTIHNS Trigger: TGAGTTGTGAATGGTGAATCAAACTAATGAGTACCA...GAATTTATGGACAAGGTCAGACATCCACGTTAGCACTAAGACAAAATGAATGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| 3UTR-3UTR GCA 90 bp | GAATTATTTGCATTTCATTGGCATGGAGACCAACATAAAACTCTAGTCTGCTTAGGATACATCAACCATTaGTGTAGTAACAAACCAGCA | + |
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Preference number: 2 (lower is better) Translates to: ELFAFHWHGDQHKTLVCLGYINH*CSNKPA Trigger: TGCTGGTTTGTTACTACAGCAATGGTTGATGTATCC...TAAGCAGACTAGAGTTTTATGTTGGTCTCCATGCCAATGAAATGCAAATAATTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| 3UTR CAA 90 bp | ATAAATCTGTCATCGATAAATTTTAAATTCTTGGTACTCATTAGTTaGATTCACCATTCACAACTCAAGCCCCTCTTGTTCCTCCATCAC | + |
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Preference number: 2 (lower is better) Translates to: INLSSINFKFLVLIS*IHHSQLKPLLFLHH Trigger: GTGATGGAGGAACAAGAGGGGCTTGAGTTGTGAATGGTGAATCAAACTAATGAGTACCAAGAATTTAAAATTTATCGATGACAGATTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| 3UTR-3UTR CAA 90 bp | GGAATGGCAAAAGGCTGTTGCTTGCTGGCTTACAGCTATGGTCACAGTCAGCTGGAGGGTCAGGTCAAATaGACAGGAAAACTAAGCAGG | + |
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Preference number: 3 (lower is better) Translates to: GMAKGCCLLAYSYGHSQLEGQVK*TGKLSR Trigger: CCTGCTTAGTTTTCCTGTCAATTTGACCTGACCCTC...CAGCTGACTGTGACCATAGCTGTAAGCCAGCAAGCAACAGCCTTTTGCCATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| 3UTR-3UTR CAA 90 bp | GGAATGGCAAAAGGCTGTTGCTTGCTGGCTTACAGCTATGGTCACAGTCAGCTGAATTCCTGTGGCCTTTaGTTGATTCTTGCATTTAGG | + |
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Preference number: 3 (lower is better) Translates to: GMAKGCCLLAYSYGHSQLNSCGL*LILAFR Trigger: CCTAAATGCAAGAATCAACAAAAGGCCACAGGAATT...CAGCTGACTGTGACCATAGCTGTAAGCCAGCAAGCAACAGCCTTTTGCCATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| 3UTR CCA 72 bp | AGCTTGAAATTGGAATGGCAAAAGGCTGTTGCTTGCTaGCTTACAGCTATGGTCACAGTCAGCTGCATTTCC | + |
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Preference number: 3 (lower is better) Translates to: SLKLEWQKAVAC*LTAMVTVSCIS Trigger: GGAAATGCAGCTGACTGTGACCATAGCTGTAAGCCAGCAAGCAACAGCCTTTTGCCATTCCAATTTCAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| 3UTR-3UTR CAA 90 bp | GGAATGGCAAAAGGCTGTTGCTTGCTGGCTTACAGCTATGGTCACAGTCAGCTGACAAACCAGCAGGATTaGATAACATACCTGATGATT | + |
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Preference number: 3 (lower is better) Translates to: GMAKGCCLLAYSYGHSQLTNQQD*ITYLMI Trigger: AATCATCAGGTATGTTATCAAATCCTGCTGGTTTGT...CAGCTGACTGTGACCATAGCTGTAAGCCAGCAAGCAACAGCCTTTTGCCATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| 3UTR-3UTR CAA 90 bp | GGAATGGCAAAAGGCTGTTGCTTGCTGGCTTACAGCTATGGTCACAGTCAGCTGTTGGTACTCATTAGTTaGATTCACCATTCACAACTC | + |
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Preference number: 3 (lower is better) Translates to: GMAKGCCLLAYSYGHSQLLVLIS*IHHSQL Trigger: GAGTTGTGAATGGTGAATCAAACTAATGAGTACCAA...CAGCTGACTGTGACCATAGCTGTAAGCCAGCAAGCAACAGCCTTTTGCCATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| 3UTR-3UTR CAA 90 bp | GGAATGGCAAAAGGCTGTTGCTTGCTGGCTTACAGCTATGGTCACAGTCAGCTGTTTCTCCTGAATTATTaGCATTTCATTGGCATGGAG | + |
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Preference number: 3 (lower is better) Translates to: GMAKGCCLLAYSYGHSQLFLLNY*HFIGME Trigger: CTCCATGCCAATGAAATGCAAATAATTCAGGAGAAA...CAGCTGACTGTGACCATAGCTGTAAGCCAGCAAGCAACAGCCTTTTGCCATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| 3UTR-3UTR CAA 90 bp | TCAACTGAGGGTCAGGTCAAATTGACAGGAAAACTAAGCAGGACAAAGGTGTTTTTGGTACTCATTAGTTaGATTCACCATTCACAACTC | + |
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Preference number: 3 (lower is better) Translates to: STEGQVKLTGKLSRTKVFLVLIS*IHHSQL Trigger: GAGTTGTGAATGGTGAATCAAACTAATGAGTACCAA...AAACACCTTTGTCCTGCTTAGTTTTCCTGTCAATTTGACCTGACCCTCAGTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| 3UTR-3UTR CAA 90 bp | TACATTCATTTTGTCTTAGTGCTAACGTGGATGTCTGACCTTGTCCATAAATTCAATTCCTGTGGCCTTTaGTTGATTCTTGCATTTAGG | + |
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Preference number: 3 (lower is better) Translates to: YIHFVLVLTWMSDLVHKFNSCGL*LILAFR Trigger: CCTAAATGCAAGAATCAACAAAAGGCCACAGGAATT...GAATTTATGGACAAGGTCAGACATCCACGTTAGCACTAAGACAAAATGAATGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| 3UTR-3UTR CAA 90 bp | TCAGGTCAAATTGACAGGAAAACTAAGCAGGACAAAGGTGTTTTCCTTCTTGTTTTTCTCCTGAATTATTaGCATTTCATTGGCATGGAG | + |
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Preference number: 3 (lower is better) Translates to: SGQIDRKTKQDKGVFLLVFLLNY*HFIGME Trigger: CTCCATGCCAATGAAATGCAAATAATTCAGGAGAAA...AACAAGAAGGAAAACACCTTTGTCCTGCTTAGTTTTCCTGTCAATTTGACCTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| 3UTR-3UTR CAA 90 bp | GAATTATTTGCATTTCATTGGCATGGAGACCAACATAAAACTCTAGTCTGCTTAACAAACCAGCAGGATTaGATAACATACCTGATGATT | + |
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Preference number: 3 (lower is better) Translates to: ELFAFHWHGDQHKTLVCLTNQQD*ITYLMI Trigger: AATCATCAGGTATGTTATCAAATCCTGCTGGTTTGT...TAAGCAGACTAGAGTTTTATGTTGGTCTCCATGCCAATGAAATGCAAATAATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| 3UTR-3UTR CAA 90 bp | GAATTATTTGCATTTCATTGGCATGGAGACCAACATAAAACTCTAGTCTGCTTATTGGTACTCATTAGTTaGATTCACCATTCACAACTC | + |
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Preference number: 3 (lower is better) Translates to: ELFAFHWHGDQHKTLVCLLVLIS*IHHSQL Trigger: GAGTTGTGAATGGTGAATCAAACTAATGAGTACCAA...TAAGCAGACTAGAGTTTTATGTTGGTCTCCATGCCAATGAAATGCAAATAATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| 3UTR TCA 72 bp | CTTGTTTTCTATTCAGCTTGGCTCATGACACATGTTTaGTCAATACATTCATTTTGTCTTAGTGCTAACGTG | + |
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Preference number: 3 (lower is better) Translates to: LVFYSAWLMTHV*SIHSFCLSANV Trigger: CACGTTAGCACTAAGACAAAATGAATGTATTGATCAAACATGTGTCATGAGCCAAGCTGAATAGAAAACAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| 3UTR GCA 72 bp | ATGCCTTCAGGTAGAATTAATGGATACATCAACCATTaGTGTAGTAACAAACCAGCAGGATTTGATAACATA | + |
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Preference number: 3 (lower is better) Translates to: MPSGRINGYINH*CSNKPAGFDNI Trigger: TATGTTATCAAATCCTGCTGGTTTGTTACTACAGCAATGGTTGATGTATCCATTAATTCTACCTGAAGGCAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| 3UTR CCA 72 bp | TTTGATCAATACATTCATTTTGTCTTAGTGCTAACGTaGATGTCTGACCTTGTCCATAAATTCATCTCAAGA | + |
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Preference number: 3 (lower is better) Translates to: FDQYIHFVLVLT*MSDLVHKFISR Trigger: TCTTGAGATGAATTTATGGACAAGGTCAGACATCCACGTTAGCACTAAGACAAAATGAATGTATTGATCAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| CDS-3UTR TCA 90 bp | GGAATGGCAAAAGGCTGTTGCTTGCTGGCTTACAGCTATGGTCACAGTCAGCTGAGAAAAAGGCCTGTGTaGAGCAAGCCACAAAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: GMAKGCCLLAYSYGHSQLRKRPV*SKPQRR Trigger: TCTCCTTTGTGGCTTGCTTCACACAGGCCTTTTTCT...CAGCTGACTGTGACCATAGCTGTAAGCCAGCAAGCAACAGCCTTTTGCCATTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| CDS-3UTR TCA 90 bp | ACCATTCACAACTCAAGCCCCTCTTGTTCCTCCATCACTAAAAGAGGATCCCTGCAACTGGACCAGCCATaGAGAGGAATCCCAAAGCTA | + |
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Preference number: 4 (lower is better) Translates to: TIHNSSPSCSSITKRGSLQLDQP*RGIPKL Trigger: TAGCTTTGGGATTCCTCTTCATGGCTGGTCCAGTTG...CAGGGATCCTCTTTTAGTGATGGAGGAACAAGAGGGGCTTGAGTTGTGAATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| CDS-3UTR TCA 90 bp | GGAATGGCAAAAGGCTGTTGCTTGCTGGCTTACAGCTATGGTCACAGTCAGCTGGGTGCATTGCTCCTCTaGAATCTGGGTAATTTAACC | + |
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Preference number: 4 (lower is better) Translates to: GMAKGCCLLAYSYGHSQLGALLL*NLGNLT Trigger: GGTTAAATTACCCAGATTTCAGAGGAGCAATGCACC...CAGCTGACTGTGACCATAGCTGTAAGCCAGCAAGCAACAGCCTTTTGCCATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| CDS-3UTR CCA 90 bp | TGTTCCTCCATCACTAAAAGAGGATCCCTGAAATCAGACCAAAGCCACACATCAGGCGTCTGCAATCGGTaGTCCAAGCAGGTGATGCTA | + |
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Preference number: 4 (lower is better) Translates to: CSSITKRGSLKSDQSHTSGVCNR*SKQVML Trigger: TAGCATCACCTGCTTGGACCACCGATTGCAGACGCC...TGATGTGTGGCTTTGGTCTGATTTCAGGGATCCTCTTTTAGTGATGGAGGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| 3UTR CAA 72 bp | CGAGAGCTTGAAATTGGAATGGCAAAAGGCTGTTGCTaGCTGGCTTACAGCTATGGTCACAGTCAGCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: RELEIGMAKGCC*LAYSYGHSQLH Trigger: ATGCAGCTGACTGTGACCATAGCTGTAAGCCAGCAAGCAACAGCCTTTTGCCATTCCAATTTCAAGCTCTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| CDS-3UTR TCA 90 bp | ACCATTCACAACTCAAGCCCCTCTTGTTCCTCCATCACTAAAAGAGGATCCCTGAGAAAAAGGCCTGTGTaGAGCAAGCCACAAAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: TIHNSSPSCSSITKRGSLRKRPV*SKPQRR Trigger: TCTCCTTTGTGGCTTGCTTCACACAGGCCTTTTTCT...CAGGGATCCTCTTTTAGTGATGGAGGAACAAGAGGGGCTTGAGTTGTGAATGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| CDS-3UTR TCA 90 bp | TCAACTGAGGGTCAGGTCAAATTGACAGGAAAACTAAGCAGGACAAAGGTGTTTGGGGCCACAGTAGGATaGCTGGGAAAGCATCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: STEGQVKLTGKLSRTKVFGATVG*LGKHHN Trigger: GTTGTGATGCTTTCCCAGTCATCCTACTGTGGCCCC...AAACACCTTTGTCCTGCTTAGTTTTCCTGTCAATTTGACCTGACCCTCAGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
||
| CDS-3UTR CCA 90 bp | ACCATTCACAACTCAAGCCCCTCTTGTTCCTCCATCACTAAAAGAGGATCCCTGGGAAAGCATCACAACTaGACCAGCCATGAAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TIHNSSPSCSSITKRGSLGKHHN*TSHEEE Trigger: TTCCTCTTCATGGCTGGTCCAGTTGTGATGCTTTCC...CAGGGATCCTCTTTTAGTGATGGAGGAACAAGAGGGGCTTGAGTTGTGAATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
||
| CDS-3UTR CCA 90 bp | TCAACTGAGGGTCAGGTCAAATTGACAGGAAAACTAAGCAGGACAAAGGTGTTTGCATCCCTCAGAGCCTaGTGGACCTGCTTGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: STEGQVKLTGKLSRTKVFASLRA*WTCLFL Trigger: GAGAAACAAGCAGGTCCACCAGGCTCTGAGGGATGC...AAACACCTTTGTCCTGCTTAGTTTTCCTGTCAATTTGACCTGACCCTCAGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
||
| CDS-3UTR TCA 90 bp | CATTTTGTCTTAGTGCTAACGTGGATGTCTGACCTTGTCCATAAATTCATCTCAGGGGCCACAGTAGGATaGCTGGGAAAGCATCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: HFVLVLTWMSDLVHKFISGATVG*LGKHHN Trigger: GTTGTGATGCTTTCCCAGTCATCCTACTGTGGCCCC...TGAGATGAATTTATGGACAAGGTCAGACATCCACGTTAGCACTAAGACAAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
||
| CDS-3UTR TCA 90 bp | TCAGGTCAAATTGACAGGAAAACTAAGCAGGACAAAGGTGTTTTCCTTCTTGTTGGGGCCACAGTAGGATaGCTGGGAAAGCATCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: SGQIDRKTKQDKGVFLLVGATVG*LGKHHN Trigger: GTTGTGATGCTTTCCCAGTCATCCTACTGTGGCCCC...AACAAGAAGGAAAACACCTTTGTCCTGCTTAGTTTTCCTGTCAATTTGACCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
||
| CDS-3UTR CCA 90 bp | TCAGGTCAAATTGACAGGAAAACTAAGCAGGACAAAGGTGTTTTCCTTCTTGTTGGCGTCTGCAATCGGTaGTCCAAGCAGGTGATGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SGQIDRKTKQDKGVFLLVGVCNR*SKQVML Trigger: TAGCATCACCTGCTTGGACCACCGATTGCAGACGCC...AACAAGAAGGAAAACACCTTTGTCCTGCTTAGTTTTCCTGTCAATTTGACCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
||
| CDS-3UTR CCA 90 bp | CAGGTAGAATTAATGGATACATCAACCATTGCTGTAGTAACAAACCAGCAGGATGGCGTCTGCAATCGGTaGTCCAAGCAGGTGATGCTA | + |
|
Preference number: 4 (lower is better) Translates to: QVELMDTSTIAVVTNQQDGVCNR*SKQVML Trigger: TAGCATCACCTGCTTGGACCACCGATTGCAGACGCC...ATCCTGCTGGTTTGTTACTACAGCAATGGTTGATGTATCCATTAATTCTACCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
||
| CDS-3UTR CCA 90 bp | TGTTCCTCCATCACTAAAAGAGGATCCCTGAAATCAGACCAAAGCCACACATCAGGAAAGCATCACAACTaGACCAGCCATGAAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CSSITKRGSLKSDQSHTSGKHHN*TSHEEE Trigger: TTCCTCTTCATGGCTGGTCCAGTTGTGATGCTTTCC...TGATGTGTGGCTTTGGTCTGATTTCAGGGATCCTCTTTTAGTGATGGAGGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
||
| CDS-3UTR CCA 90 bp | CAGGTAGAATTAATGGATACATCAACCATTGCTGTAGTAACAAACCAGCAGGATGCATCCCTCAGAGCCTaGTGGACCTGCTTGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QVELMDTSTIAVVTNQQDASLRA*WTCLFL Trigger: GAGAAACAAGCAGGTCCACCAGGCTCTGAGGGATGC...ATCCTGCTGGTTTGTTACTACAGCAATGGTTGATGTATCCATTAATTCTACCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
||
| 3UTR CAA 72 bp | GATGGTAGCCATTCCTCAACTGAGGGTCAGGTCAAATaGACAGGAAAACTAAGCAGGACAAAGGTGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DGSHSSTEGQVK*TGKLSRTKVFS Trigger: GGAAAACACCTTTGTCCTGCTTAGTTTTCCTGTCAATTTGACCTGACCCTCAGTTGAGGAATGGCTACCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
||
| CDS-3UTR GCA 90 bp | TCAGGTCAAATTGACAGGAAAACTAAGCAGGACAAAGGTGTTTTCCTTCTTGTTTTTAACCCTGGACAGTaGATCCCTCAGAGCCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SGQIDRKTKQDKGVFLLVFNPGQ*IPQSLV Trigger: CACCAGGCTCTGAGGGATGCACTGTCCAGGGTTAAA...AACAAGAAGGAAAACACCTTTGTCCTGCTTAGTTTTCCTGTCAATTTGACCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
||
| CDS-3UTR GCA 90 bp | CAGGTAGAATTAATGGATACATCAACCATTGCTGTAGTAACAAACCAGCAGGATTTTAACCCTGGACAGTaGATCCCTCAGAGCCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QVELMDTSTIAVVTNQQDFNPGQ*IPQSLV Trigger: CACCAGGCTCTGAGGGATGCACTGTCCAGGGTTAAA...ATCCTGCTGGTTTGTTACTACAGCAATGGTTGATGTATCCATTAATTCTACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
||
| CDS-3UTR CCA 90 bp | TACATTCATTTTGTCTTAGTGCTAACGTGGATGTCTGACCTTGTCCATAAATTCGCATCCCTCAGAGCCTaGTGGACCTGCTTGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YIHFVLVLTWMSDLVHKFASLRA*WTCLFL Trigger: GAGAAACAAGCAGGTCCACCAGGCTCTGAGGGATGC...GAATTTATGGACAAGGTCAGACATCCACGTTAGCACTAAGACAAAATGAATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
||
| CDS-3UTR TCA 90 bp | TCAACTGAGGGTCAGGTCAAATTGACAGGAAAACTAAGCAGGACAAAGGTGTTTGGTGCATTGCTCCTCTaGAATCTGGGTAATTTAACC | + |
|
Preference number: 4 (lower is better) Translates to: STEGQVKLTGKLSRTKVFGALLL*NLGNLT Trigger: GGTTAAATTACCCAGATTTCAGAGGAGCAATGCACC...AAACACCTTTGTCCTGCTTAGTTTTCCTGTCAATTTGACCTGACCCTCAGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
||
| CDS-3UTR TCA 90 bp | CATTTTGTCTTAGTGCTAACGTGGATGTCTGACCTTGTCCATAAATTCATCTCAAGAAAAAGGCCTGTGTaGAGCAAGCCACAAAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HFVLVLTWMSDLVHKFISRKRPV*SKPQRR Trigger: TCTCCTTTGTGGCTTGCTTCACACAGGCCTTTTTCT...TGAGATGAATTTATGGACAAGGTCAGACATCCACGTTAGCACTAAGACAAAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
||
| CDS-3UTR TCA 90 bp | GAATTATTTGCATTTCATTGGCATGGAGACCAACATAAAACTCTAGTCTGCTTACAACTGGACCAGCCATaGAGAGGAATCCCAAAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: ELFAFHWHGDQHKTLVCLQLDQP*RGIPKL Trigger: TAGCTTTGGGATTCCTCTTCATGGCTGGTCCAGTTG...TAAGCAGACTAGAGTTTTATGTTGGTCTCCATGCCAATGAAATGCAAATAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
||
| CDS-3UTR CCA 90 bp | TCAACTGAGGGTCAGGTCAAATTGACAGGAAAACTAAGCAGGACAAAGGTGTTTCCTGCTTGTCTGCTTTaGCTTCATGTATATAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: STEGQVKLTGKLSRTKVFPACLL*LHVYKY Trigger: GTATTTATATACATGAAGCCAAAGCAGACAAGCAGG...AAACACCTTTGTCCTGCTTAGTTTTCCTGTCAATTTGACCTGACCCTCAGTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
||
| CDS-3UTR CCA 90 bp | TACATTCATTTTGTCTTAGTGCTAACGTGGATGTCTGACCTTGTCCATAAATTCCCTGCTTGTCTGCTTTaGCTTCATGTATATAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: YIHFVLVLTWMSDLVHKFPACLL*LHVYKY Trigger: GTATTTATATACATGAAGCCAAAGCAGACAAGCAGG...GAATTTATGGACAAGGTCAGACATCCACGTTAGCACTAAGACAAAATGAATGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
||
| 3UTR CAA 72 bp | TCATCGATAAATTTTAAATTCTTGGTACTCATTAGTTaGATTCACCATTCACAACTCAAGCCCCTCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSINFKFLVLIS*IHHSQLKPLLF Trigger: GAACAAGAGGGGCTTGAGTTGTGAATGGTGAATCAAACTAATGAGTACCAAGAATTTAAAATTTATCGATGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| CDS CCA 90 bp | ATCCTCAGGTGCTCGGCCACAGGGAACCCCTCAAGGACAAACTCCTaGACCCATGTCCCATTCCTTGTTTCCTCTGCCGTCAGCCGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ILRCSATGNPSRTNS*THVPFLVSSAVSRS Trigger: GGAACGGCTGACGGCAGAGGAAACAAGGAATGGGACATGGGTCCAGGAGTTTGTCCTTGAGGGGTTCCCTGTGGCCGAGCACCTGAGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
||
| CDS-3UTR CAA 90 bp | GGAATGGCAAAAGGCTGTTGCTTGCTGGCTTACAGCTATGGTCACAGTCAGCTGCTAATTATGAGCGTGTaGCCCATGAGGGAAGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GMAKGCCLLAYSYGHSQLLIMSV*PMREAK Trigger: CTTGGCTTCCCTCATGGGCAACACGCTCATAATTAG...CAGCTGACTGTGACCATAGCTGTAAGCCAGCAAGCAACAGCCTTTTGCCATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| CDS-3UTR CAA 90 bp | TGTTCCTCCATCACTAAAAGAGGATCCCTGAAATCAGACCAAAGCCACACATCAAGAGCAGCCTCTCGGTaGGTGTCCAGCCTGCTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: CSSITKRGSLKSDQSHTSRAASR*VSSLLV Trigger: GACAAGCAGGCTGGACACCAACCGAGAGGCTGCTCT...TGATGTGTGGCTTTGGTCTGATTTCAGGGATCCTCTTTTAGTGATGGAGGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| CDS GCA 90 bp | AGAAAGAAAAAGGCCTGTGTGAAGCAAGCCACAAAGGAGATGGTTTaGCTCCCTGACAGAAAGATGGCGAGCAGCTGGGGGATAACTGTA | + |
|
Preference number: 5 (lower is better) Translates to: RKKKACVKQATKEMV*LPDRKMASSWGITV Trigger: TACAGTTATCCCCCAGCTGCTCGCCATCTTTCTGTCAGGGAGGCAAACCATCTCCTTTGTGGCTTGCTTCACACAGGCCTTTTTCTTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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| CDS-3UTR CAA 90 bp | TGTTCCTCCATCACTAAAAGAGGATCCCTGAAATCAGACCAAAGCCACACATCACCCATGTCCCATTCCTaGTTTCCTCTGCCGTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: CSSITKRGSLKSDQSHTSPMSHS*FPLPSA Trigger: GGCTGACGGCAGAGGAAACAAGGAATGGGACATGGG...TGATGTGTGGCTTTGGTCTGATTTCAGGGATCCTCTTTTAGTGATGGAGGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
||
| CDS-3UTR CAA 90 bp | TCAACTGAGGGTCAGGTCAAATTGACAGGAAAACTAAGCAGGACAAAGGTGTTTGGAAAAAGCTCTCTGTaGCTCCCTGGCCGAAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: STEGQVKLTGKLSRTKVFGKSSL*LPGRRE Trigger: CTCCCTTCGGCCAGGGAGCAACAGAGAGCTTTTTCC...AAACACCTTTGTCCTGCTTAGTTTTCCTGTCAATTTGACCTGACCCTCAGTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
||
| CDS-3UTR CAA 90 bp | TCAGGTCAAATTGACAGGAAAACTAAGCAGGACAAAGGTGTTTTCCTTCTTGTTAGAGCAGCCTCTCGGTaGGTGTCCAGCCTGCTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SGQIDRKTKQDKGVFLLVRAASR*VSSLLV Trigger: GACAAGCAGGCTGGACACCAACCGAGAGGCTGCTCT...AACAAGAAGGAAAACACCTTTGTCCTGCTTAGTTTTCCTGTCAATTTGACCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
||
| CDS-3UTR CAA 90 bp | CATTTTGTCTTAGTGCTAACGTGGATGTCTGACCTTGTCCATAAATTCATCTCACCCATGTCCCATTCCTaGTTTCCTCTGCCGTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: HFVLVLTWMSDLVHKFISPMSHS*FPLPSA Trigger: GGCTGACGGCAGAGGAAACAAGGAATGGGACATGGG...TGAGATGAATTTATGGACAAGGTCAGACATCCACGTTAGCACTAAGACAAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
||
| CDS-3UTR CAA 90 bp | CATTTTGTCTTAGTGCTAACGTGGATGTCTGACCTTGTCCATAAATTCATCTCAGGAAAAAGCTCTCTGTaGCTCCCTGGCCGAAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: HFVLVLTWMSDLVHKFISGKSSL*LPGRRE Trigger: CTCCCTTCGGCCAGGGAGCAACAGAGAGCTTTTTCC...TGAGATGAATTTATGGACAAGGTCAGACATCCACGTTAGCACTAAGACAAAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
||
| CDS-3UTR CAA 90 bp | TACATTCATTTTGTCTTAGTGCTAACGTGGATGTCTGACCTTGTCCATAAATTCGGAAAAAGCTCTCTGTaGCTCCCTGGCCGAAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: YIHFVLVLTWMSDLVHKFGKSSL*LPGRRE Trigger: CTCCCTTCGGCCAGGGAGCAACAGAGAGCTTTTTCC...GAATTTATGGACAAGGTCAGACATCCACGTTAGCACTAAGACAAAATGAATGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
||
| CDS-3UTR CAA 90 bp | GAATTATTTGCATTTCATTGGCATGGAGACCAACATAAAACTCTAGTCTGCTTACCCATGTCCCATTCCTaGTTTCCTCTGCCGTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ELFAFHWHGDQHKTLVCLPMSHS*FPLPSA Trigger: GGCTGACGGCAGAGGAAACAAGGAATGGGACATGGG...TAAGCAGACTAGAGTTTTATGTTGGTCTCCATGCCAATGAAATGCAAATAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
||
| CDS-3UTR CAA 90 bp | CATTTTGTCTTAGTGCTAACGTGGATGTCTGACCTTGTCCATAAATTCATCTCACTAATTATGAGCGTGTaGCCCATGAGGGAAGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: HFVLVLTWMSDLVHKFISLIMSV*PMREAK Trigger: CTTGGCTTCCCTCATGGGCAACACGCTCATAATTAG...TGAGATGAATTTATGGACAAGGTCAGACATCCACGTTAGCACTAAGACAAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
||
| CDS CCA 72 bp | TGCTCGGCCACAGGGAACCCCTCAAGGACAAACTCCTaGACCCATGTCCCATTCCTTGTTTCCTCTGCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: CSATGNPSRTNS*THVPFLVSSAV Trigger: GACGGCAGAGGAAACAAGGAATGGGACATGGGTCCAGGAGTTTGTCCTTGAGGGGTTCCCTGTGGCCGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
||
| CDS CAA 72 bp | GGTGTCACTACCGTGTTCACAAGAGCAGCCTCTCGGTaGGTGTCCAGCCTGCTTGTCTGCTTTGGCTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: GVTTVFTRAASR*VSSLLVCFGFM Trigger: CATGAAGCCAAAGCAGACAAGCAGGCTGGACACCAACCGAGAGGCTGCTCTTGTGAACACGGTAGTGACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
||
| CDS CCA 72 bp | GTGTCACTACCGTGTTCACAAGAGCAGCCTCTCGGTTaGTGTCCAGCCTGCTTGTCTGCTTTGGCTTCATGT | + |
|
Preference number: 6 (lower is better) Translates to: VSLPCSQEQPLG*CPACLSALASC Trigger: ACATGAAGCCAAAGCAGACAAGCAGGCTGGACACCAACCGAGAGGCTGCTCTTGTGAACACGGTAGTGACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
||
| CDS CAA 90 bp | TGTTGCTCCCTGGCCGAAGGGAGACCCACTATTGTGACCACTATGTaGCTGTATGCAAAGATGGCTACCAGAAGGGAACCAAAAAGCACA | + |
|
Preference number: 6 (lower is better) Translates to: CCSLAEGRPTIVTTM*LYAKMATRREPKST Trigger: TGTGCTTTTTGGTTCCCTTCTGGTAGCCATCTTTGCATACAGCAACATAGTGGTCACAATAGTGGGTCTCCCTTCGGCCAGGGAGCAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
||
| CDS CAA 90 bp | TTCAGAAGGGGTGTCACTACCGTGTTCACAAGAGCAGCCTCTCGGTaGGTGTCCAGCCTGCTTGTCTGCTTTGGCTTCATGTATATAAAT | + |
|
Preference number: 6 (lower is better) Translates to: FRRGVTTVFTRAASR*VSSLLVCFGFMYIN Trigger: ATTTATATACATGAAGCCAAAGCAGACAAGCAGGCTGGACACCAACCGAGAGGCTGCTCTTGTGAACACGGTAGTGACACCCCTTCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075756.3 ENSMUST00000218028.2 ENSMUST00000220134.2 |
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