Pregenerated sensors for OLFR211 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053391Ensembl transcript IDs: ENSMUST00000065786.4, ENSMUST00000203700.3
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACGGTACAAGGGCTGTCAGGGCATGGAAGGCAGATGGGCAGGACATaGGGCAGCTGGTCACGTGGCTTCGGATTTGGAAAGCAGAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: TVQGLSGHGRQMGRT*GSWSRGFGFGKQRK Trigger: CTTCCTCTGCTTTCCAAATCCGAAGCCACGTGACCAGCTGCCTCATGTCCTGCCCATCTGCCTTCCATGCCCTGACAGCCCTTGTACCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR CCA 90 bp | AGGGCATGGAAGGCAGATGGGCAGGACATGAGGCAGCTGGTCACGTaGCTTCGGATTTGGAAAGCAGAGGAAGATGAAGGTTTGTCTGTT | + |
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Preference number: 1 (lower is better) Translates to: RAWKADGQDMRQLVT*LRIWKAEEDEGLSV Trigger: AACAGACAAACCTTCATCTTCCTCTGCTTTCCAAATCCGAAGCCACGTGACCAGCTGCCTCATGTCCTGCCCATCTGCCTTCCATGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR TCA 90 bp | GAGGCAGCTGGTCACGTGGCTTCGGATTTGGAAAGCAGAGGAAGATaGAGGTTTGTCTGTTCACTTTCTCTAGACCCTTTGGATAGGTTC | + |
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Preference number: 1 (lower is better) Translates to: EAAGHVASDLESRGR*RFVCSLSLDPLDRF Trigger: GAACCTATCCAAAGGGTCTAGAGAAAGTGAACAGACAAACCTTCATCTTCCTCTGCTTTCCAAATCCGAAGCCACGTGACCAGCTGCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR GCA 90 bp | GACCCTTTGGATAGGTTCAGAAGCAGAAGGTTGGGAATTCTGACCTaGCAAAGTCTCAAGGCATTCACACCCTCAGAACAGACAAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: DPLDRFRSRRLGILT*QSLKAFTPSEQTKQ Trigger: CTGCTTTGTCTGTTCTGAGGGTGTGAATGCCTTGAGACTTTGGCAGGTCAGAATTCCCAACCTTCTGCTTCTGAACCTATCCAAAGGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR TCA 90 bp | ATGATCAAGGTCTTGTCACATTTTCACTTCCTCTCTGGCCTTGGATaGCAACATTGCTTGGCACTTGAGATGCAGGACCACCTTTGTGAC | + |
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Preference number: 1 (lower is better) Translates to: MIKVLSHFHFLSGLG*QHCLALEMQDHLCD Trigger: GTCACAAAGGTGGTCCTGCATCTCAAGTGCCAAGCAATGTTGTCATCCAAGGCCAGAGAGGAAGTGAAAATGTGACAAGACCTTGATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR TCA 90 bp | TGCTTAGAAGGAGAGTTCCAATTGACTCCCTGCTTCTGCCAAGCATaGTCAAGGTCTTGTCACATTTTCACTTCCTCTCTGGCCTTGGAT | + |
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Preference number: 1 (lower is better) Translates to: CLEGEFQLTPCFCQA*SRSCHIFTSSLALD Trigger: ATCCAAGGCCAGAGAGGAAGTGAAAATGTGACAAGACCTTGATCATGCTTGGCAGAAGCAGGGAGTCAATTGGAACTCTCCTTCTAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR CCA 90 bp | TGTCACATTTTCACTTCCTCTCTGGCCTTGGATGACAACATTGCTTaGCACTTGAGATGCAGGACCACCTTTGTGACTGTGTTTGTAGTG | + |
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Preference number: 1 (lower is better) Translates to: CHIFTSSLALDDNIA*HLRCRTTFVTVFVV Trigger: CACTACAAACACAGTCACAAAGGTGGTCCTGCATCTCAAGTGCCAAGCAATGTTGTCATCCAAGGCCAGAGAGGAAGTGAAAATGTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR CCA 90 bp | CAAGGCATTCACACCCTCAGAACAGACAAAGCAGGACCCAGAGGCTaGGTTTTTCTTCTTGTTTGTCAGATTTCCAGTTCTGGAGATCAA | + |
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Preference number: 1 (lower is better) Translates to: QGIHTLRTDKAGPRG*VFLLVCQISSSGDQ Trigger: TTGATCTCCAGAACTGGAAATCTGACAAACAAGAAGAAAAACCCAGCCTCTGGGTCCTGCTTTGTCTGTTCTGAGGGTGTGAATGCCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR GCA 90 bp | TTGCCACAAGGGTTTCTAACACAAGGAACAGACTCAAGATCTCTCTaGATTGATACAGACTTGTCCAGCTTTATTCAGAAACACCAGAAG | + |
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Preference number: 1 (lower is better) Translates to: LPQGFLTQGTDSRSL*IDTDLSSFIQKHQK Trigger: CTTCTGGTGTTTCTGAATAAAGCTGGACAAGTCTGTATCAATGCAGAGAGATCTTGAGTCTGTTCCTTGTGTTAGAAACCCTTGTGGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR TCA 90 bp | AGCAAGCCAATCTGGTTTCTACCACACAAGGTGATTAAATTGAATTaGGAACCTCAAGAGAATAAGAACCTGTGGTTGGGGAATGATGAG | + |
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Preference number: 1 (lower is better) Translates to: SKPIWFLPHKVIKLN*EPQENKNLWLGNDE Trigger: CTCATCATTCCCCAACCACAGGTTCTTATTCTCTTGAGGTTCTCAATTCAATTTAATCACCTTGTGTGGTAGAAACCAGATTGGCTTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR CCA 90 bp | TCAGGTCCAAAATCAAATTGCTTCCAATGGAGGATAATAAAAATATaGCCGAAGACTCAAAGACAGCTCAGCCTTCCTAAATCAAATATC | + |
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Preference number: 1 (lower is better) Translates to: SGPKSNCFQWRIIKI*PKTQRQLSLPKSNI Trigger: GATATTTGATTTAGGAAGGCTGAGCTGTCTTTGAGTCTTCGGCCATATTTTTATTATCCTCCATTGGAAGCAATTTGATTTTGGACCTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR CCA 90 bp | TTCTCAAATTCTCAAATTTCAGGTCCAAAATCAAATTGCTTCCAATaGAGGATAATAAAAATATGGCCGAAGACTCAAAGACAGCTCAGC | + |
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Preference number: 1 (lower is better) Translates to: FSNSQISGPKSNCFQ*RIIKIWPKTQRQLS Trigger: GCTGAGCTGTCTTTGAGTCTTCGGCCATATTTTTATTATCCTCCATTGGAAGCAATTTGATTTTGGACCTGAAATTTGAGAATTTGAGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR-3UTR CCA 90 bp | GCATTCACACCCTCAGAACAGACAAAGCAGGACCCAGAGGCTGGGTTTTTCTTCATCCTGAAAATGCTGTaGGGCCCCCACACATATCTC | + |
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Preference number: 2 (lower is better) Translates to: AFTPSEQTKQDPEAGFFFILKML*GPHTYL Trigger: GAGATATGTGTGGGGGCCCCACAGCATTTTCAGGAT...GAAGAAAAACCCAGCCTCTGGGTCCTGCTTTGTCTGTTCTGAGGGTGTGAATGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR-3UTR CCA 90 bp | AGCTGGTCACGTGGCTTCGGATTTGGAAAGCAGAGGAAGATGAAGGTTTGTCTGCCAGGACAAATGAAGTaGCTCAGACCCTCAGAATTC | + |
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Preference number: 2 (lower is better) Translates to: SWSRGFGFGKQRKMKVCLPGQMK*LRPSEF Trigger: GAATTCTGAGGGTCTGAGCCACTTCATTTGTCCTGG...CAGACAAACCTTCATCTTCCTCTGCTTTCCAAATCCGAAGCCACGTGACCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR-3UTR CCA 90 bp | AGCTGGTCACGTGGCTTCGGATTTGGAAAGCAGAGGAAGATGAAGGTTTGTCTGCCCAAGACTGAACTGTaGCTTCAGAAACCACTAGGA | + |
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Preference number: 2 (lower is better) Translates to: SWSRGFGFGKQRKMKVCLPKTEL*LQKPLG Trigger: TCCTAGTGGTTTCTGAAGCCACAGTTCAGTCTTGGG...CAGACAAACCTTCATCTTCCTCTGCTTTCCAAATCCGAAGCCACGTGACCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR-3UTR CCA 90 bp | AGCTGGTCACGTGGCTTCGGATTTGGAAAGCAGAGGAAGATGAAGGTTTGTCTGGTCCTTTCTTCTCTATaGCTCCTGCCTGTGGAAAGT | + |
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Preference number: 2 (lower is better) Translates to: SWSRGFGFGKQRKMKVCLVLSSL*LLPVES Trigger: ACTTTCCACAGGCAGGAGCCATAGAGAAGAAAGGAC...CAGACAAACCTTCATCTTCCTCTGCTTTCCAAATCCGAAGCCACGTGACCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR CAA 90 bp | TATCATGCTGCAATCAAGCTGAGACCCCATTTCTCAGTCTCAGAGTaGTGTGAGCTCACATGCAACCACACACTTCCATTAGCCAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: YHAAIKLRPHFSVSE*CELTCNHTLPLASD Trigger: GTCACTGGCTAATGGAAGTGTGTGGTTGCATGTGAGCTCACACAACTCTGAGACTGAGAAATGGGGTCTCAGCTTGATTGCAGCATGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR-3UTR TCA 90 bp | TGGAAATTCTGTCCTTTCTTCTCTATGGCTCCTGCCTGTGGAAAGTTGTCATTGCCATTCCAGGACAAATaGAGTGGCTCAGACCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: WKFCPFFSMAPACGKLSLPFQDK*SGSDPQ Trigger: CTGAGGGTCTGAGCCACTTCATTTGTCCTGGAATGG...CAATGACAACTTTCCACAGGCAGGAGCCATAGAGAAGAAAGGACAGAATTTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR-3UTR TCA 90 bp | AGCTGGTCACGTGGCTTCGGATTTGGAAAGCAGAGGAAGATGAAGGTTTGTCTGATTGCCCCTGTCCACTaGATCATTTCAGAGAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: SWSRGFGFGKQRKMKVCLIAPVH*IISESS Trigger: TGAACTCTCTGAAATGATTCAGTGGACAGGGGCAAT...CAGACAAACCTTCATCTTCCTCTGCTTTCCAAATCCGAAGCCACGTGACCAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR-3UTR CCA 90 bp | GCATTCACACCCTCAGAACAGACAAAGCAGGACCCAGAGGCTGGGTTTTTCTTCGAGTTTTTACAGGTATaGCCAAGAGGTGGACCTAAA | + |
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Preference number: 2 (lower is better) Translates to: AFTPSEQTKQDPEAGFFFEFLQV*PRGGPK Trigger: TTTAGGTCCACCTCTTGGCCATACCTGTAAAAACTC...GAAGAAAAACCCAGCCTCTGGGTCCTGCTTTGTCTGTTCTGAGGGTGTGAATGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR CAA 90 bp | TGTTCACTTTCTCTAGACCCTTTGGATAGGTTCAGAAGCAGAAGGTaGGGAATTCTGACCTGCCAAAGTCTCAAGGCATTCACACCCTCA | + |
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Preference number: 2 (lower is better) Translates to: CSLSLDPLDRFRSRR*GILTCQSLKAFTPS Trigger: TGAGGGTGTGAATGCCTTGAGACTTTGGCAGGTCAGAATTCCCAACCTTCTGCTTCTGAACCTATCCAAAGGGTCTAGAGAAAGTGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR-3UTR TCA 90 bp | TTGCCACAAGGGTTTCTAACACAAGGAACAGACTCAAGATCTCTCTGCATTGATGGGACCAGAGTCACCTaGAGCAATTCTCAGGTCAAG | + |
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Preference number: 2 (lower is better) Translates to: LPQGFLTQGTDSRSLCIDGTRVT*SNSQVK Trigger: CTTGACCTGAGAATTGCTTCAGGTGACTCTGGTCCC...ATCAATGCAGAGAGATCTTGAGTCTGTTCCTTGTGTTAGAAACCCTTGTGGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR CAA 90 bp | CATCAAAAATTACTTTGGAAGCTTAAAGGGCTCCAGAGGGAAGACTaGGAGGGAAATAGAAGTGGGTTTCTTAGGGACCAGAGTCACCTG | + |
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Preference number: 2 (lower is better) Translates to: HQKLLWKLKGLQRED*EGNRSGFLRDQSHL Trigger: CAGGTGACTCTGGTCCCTAAGAAACCCACTTCTATTTCCCTCCAAGTCTTCCCTCTGGAGCCCTTTAAGCTTCCAAAGTAATTTTTGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR CAA 90 bp | CAGAACAGACAAAGCAGGACCCAGAGGCTGGGTTTTTCTTCTTGTTaGTCAGATTTCCAGTTCTGGAGATCAAATCCTGAGCCTCACAAT | + |
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Preference number: 2 (lower is better) Translates to: QNRQSRTQRLGFSSC*SDFQFWRSNPEPHN Trigger: ATTGTGAGGCTCAGGATTTGATCTCCAGAACTGGAAATCTGACAAACAAGAAGAAAAACCCAGCCTCTGGGTCCTGCTTTGTCTGTTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR-3UTR TCA 90 bp | TTGCCACAAGGGTTTCTAACACAAGGAACAGACTCAAGATCTCTCTGCATTGATAGTCTCAGAGTTGTGTaGGCTCACATGCAACCACAC | + |
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Preference number: 2 (lower is better) Translates to: LPQGFLTQGTDSRSLCIDSLRVV*AHMQPH Trigger: GTGTGGTTGCATGTGAGCTCACACAACTCTGAGACT...ATCAATGCAGAGAGATCTTGAGTCTGTTCCTTGTGTTAGAAACCCTTGTGGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR-3UTR TCA 90 bp | TGGAAATTCTGTCCTTTCTTCTCTATGGCTCCTGCCTGTGGAAAGTTGTCATTGATGCTGCAATCAAGCTaGGACCCCATTTCTCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: WKFCPFFSMAPACGKLSLMLQSS*DPISQS Trigger: AGACTGAGAAATGGGGTCTCAGCTTGATTGCAGCAT...CAATGACAACTTTCCACAGGCAGGAGCCATAGAGAAGAAAGGACAGAATTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR-3UTR CCA 90 bp | ATAGTGTTGCCTTCTTACCATGCTTCTGTTACAGCTAACTCCTATCACTGTCCCTCCAGAGGGAAGACTTaGAGGGAAATAGAAGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: IVLPSYHASVTANSYHCPSRGKT*REIEVG Trigger: ACCCACTTCTATTTCCCTCCAAGTCTTCCCTCTGGA...GGGACAGTGATAGGAGTTAGCTGTAACAGAAGCATGGTAAGAAGGCAACACTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR-3UTR CCA 90 bp | GCATTCACACCCTCAGAACAGACAAAGCAGGACCCAGAGGCTGGGTTTTTCTTCAAATACCTGCTTAACTaGGGTATGTGTTTCCTAAGT | + |
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Preference number: 2 (lower is better) Translates to: AFTPSEQTKQDPEAGFFFKYLLN*GMCFLS Trigger: ACTTAGGAAACACATACCCCAGTTAAGCAGGTATTT...GAAGAAAAACCCAGCCTCTGGGTCCTGCTTTGTCTGTTCTGAGGGTGTGAATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR-3UTR GCA 90 bp | TTGCCACAAGGGTTTCTAACACAAGGAACAGACTCAAGATCTCTCTGCATTGATGACGAGCCTTTCATATaGTCACAGGATTGCCAATCC | + |
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Preference number: 2 (lower is better) Translates to: LPQGFLTQGTDSRSLCIDDEPFI*SQDCQS Trigger: GGATTGGCAATCCTGTGAGCATATGAAAGGCTCGTC...ATCAATGCAGAGAGATCTTGAGTCTGTTCCTTGTGTTAGAAACCCTTGTGGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR CAA 90 bp | ATTTTCACTTCCTCTCTGGCCTTGGATGACAACATTGCTTGGCACTaGAGATGCAGGACCACCTTTGTGACTGTGTTTGTAGTGTTAAAT | + |
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Preference number: 2 (lower is better) Translates to: IFTSSLALDDNIAWH*RCRTTFVTVFVVLN Trigger: ATTTAACACTACAAACACAGTCACAAAGGTGGTCCTGCATCTCAAGTGCCAAGCAATGTTGTCATCCAAGGCCAGAGAGGAAGTGAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR-3UTR CCA 90 bp | CTTCTGTTACAGCTAACTCCTATCACTGTCCCCATTCCAGGACAAATGAAGTGGAGAGGTGAGAAATCCTaGATATTTATCCAGGTGCAT | + |
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Preference number: 2 (lower is better) Translates to: LLLQLTPITVPIPGQMKWRGEKS*IFIQVH Trigger: ATGCACCTGGATAAATATCCAGGATTTCTCACCTCT...CCACTTCATTTGTCCTGGAATGGGGACAGTGATAGGAGTTAGCTGTAACAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR-3UTR CCA 90 bp | TTTATGCTTAGAAGGAGAGTTCCAATTGACTCCCTGCTTCTGCCAAGCATGATCTTTTCACTTCCTCTCTaGCCTTGGATGACAACATTG | + |
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Preference number: 2 (lower is better) Translates to: FMLRRRVPIDSLLLPSMIFSLPL*PWMTTL Trigger: CAATGTTGTCATCCAAGGCCAGAGAGGAAGTGAAAA...GATCATGCTTGGCAGAAGCAGGGAGTCAATTGGAACTCTCCTTCTAAGCATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR CAA 90 bp | CTAACACAAGGAACAGACTCAAGATCTCTCTGCATTGATACAGACTaGTCCAGCTTTATTCAGAAACACCAGAAGGATAGTGTTGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: LTQGTDSRSLCIDTD*SSFIQKHQKDSVAF Trigger: GAAGGCAACACTATCCTTCTGGTGTTTCTGAATAAAGCTGGACAAGTCTGTATCAATGCAGAGAGATCTTGAGTCTGTTCCTTGTGTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR-3UTR TCA 90 bp | TGGAAATTCTGTCCTTTCTTCTCTATGGCTCCTGCCTGTGGAAAGTTGTCATTGAGCCAACTCAAGAGGTaGGAAATCCTGGATATTTAT | + |
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Preference number: 2 (lower is better) Translates to: WKFCPFFSMAPACGKLSLSQLKR*EILDIY Trigger: ATAAATATCCAGGATTTCTCACCTCTTGAGTTGGCT...CAATGACAACTTTCCACAGGCAGGAGCCATAGAGAAGAAAGGACAGAATTTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR-3UTR CCA 90 bp | CTTCTGTTACAGCTAACTCCTATCACTGTCCCCATTCCAGGACAAATGAAGTGGCATCAAAAATTACTTTaGAAGCTTAAAGGGCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: LLLQLTPITVPIPGQMKWHQKLL*KLKGLQ Trigger: CTGGAGCCCTTTAAGCTTCCAAAGTAATTTTTGATG...CCACTTCATTTGTCCTGGAATGGGGACAGTGATAGGAGTTAGCTGTAACAGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR CAA 90 bp | CCATACAACTTAACCCCATTAGCTCAGGCAGCCATCAATATTCGATaGGAACCAGGAAGTATAATATGCAGTTTTTCACAACTACTCTGG | + |
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Preference number: 2 (lower is better) Translates to: PYNLTPLAQAAINIR*EPGSIICSFSQLLW Trigger: CCAGAGTAGTTGTGAAAAACTGCATATTATACTTCCTGGTTCCAATCGAATATTGATGGCTGCCTGAGCTAATGGGGTTAAGTTGTATGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR-3UTR TCA 90 bp | TTTATGCTTAGAAGGAGAGTTCCAATTGACTCCCTGCTTCTGCCAAGCATGATCTTTTTCCTGTCATCATaGCCAAAAGAATGGACTTTG | + |
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Preference number: 2 (lower is better) Translates to: FMLRRRVPIDSLLLPSMIFFLSS*PKEWTL Trigger: CAAAGTCCATTCTTTTGGTCATGATGACAGGAAAAA...GATCATGCTTGGCAGAAGCAGGGAGTCAATTGGAACTCTCCTTCTAAGCATAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR-3UTR GCA 90 bp | TGGAAATTCTGTCCTTTCTTCTCTATGGCTCCTGCCTGTGGAAAGTTGTCATTGCAAAATAGGTTCAACTaGAAAGAGAGAAAGCATGGT | + |
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Preference number: 2 (lower is better) Translates to: WKFCPFFSMAPACGKLSLQNRFN*KERKHG Trigger: ACCATGCTTTCTCTCTTTGCAGTTGAACCTATTTTG...CAATGACAACTTTCCACAGGCAGGAGCCATAGAGAAGAAAGGACAGAATTTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGATAGTGTTGCCTTCTTACCATGCTTCTGTTACAGCTAACTCCTATCACGCACTTTTGTCCTCATaGAGAGTTTTTGTTTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: RRIVLPSYHASVTANSYHALLSS*RVFVSL Trigger: CAGAGAAACAAAAACTCTCCATGAGGACAAAAGTGC...GTGATAGGAGTTAGCTGTAACAGAAGCATGGTAAGAAGGCAACACTATCCTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR CAA 90 bp | CAAAGAGAGAAAGCATGGTCTGAATATAAAGGACCTGTTTTAAGTTaGCAGAACAGGGTAAACATGTCTAGACTGAAAGAGGAGGAGGAT | + |
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Preference number: 2 (lower is better) Translates to: QREKAWSEYKGPVLS*QNRVNMSRLKEEED Trigger: ATCCTCCTCCTCTTTCAGTCTAGACATGTTTACCCTGTTCTGCAAACTTAAAACAGGTCCTTTATATTCAGACCATGCTTTCTCTCTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR-3UTR GCA 90 bp | TGGAAATTCTGTCCTTTCTTCTCTATGGCTCCTGCCTGTGGAAAGTTGTCATTGGGTCCAAAATCAAATTaGTTCCAATGGAGGATAATA | + |
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Preference number: 2 (lower is better) Translates to: WKFCPFFSMAPACGKLSLGPKSN*FQWRII Trigger: TATTATCCTCCATTGGAAGCAATTTGATTTTGGACC...CAATGACAACTTTCCACAGGCAGGAGCCATAGAGAAGAAAGGACAGAATTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR-3UTR GCA 90 bp | TGGCCGAAGACTCAAAGACAGCTCAGCCTTCCTAAATCAAATATCAATTTCTATGGATATTTATCCAGGTaGATAAGCCACATATCATGT | + |
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Preference number: 2 (lower is better) Translates to: WPKTQRQLSLPKSNINFYGYLSR*ISHISC Trigger: ACATGATATGTGGCTTATGCACCTGGATAAATATCC...ATAGAAATTGATATTTGATTTAGGAAGGCTGAGCTGTCTTTGAGTCTTCGGCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR-3UTR GCA 90 bp | TGTGTTTGTAGTGTTAAATACCTGCTTAACTGGGGTATGTGTTTCCTAAGTGTGATATGCTCACAGGATTaGCAATCCTTAATGAAACTA | + |
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Preference number: 2 (lower is better) Translates to: CVCSVKYLLNWGMCFLSVICSQD*QSLMKL Trigger: TAGTTTCATTAAGGATTGGCAATCCTGTGAGCATAT...CACACTTAGGAAACACATACCCCAGTTAAGCAGGTATTTAACACTACAAACACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR-3UTR GCA 90 bp | AGTGGAGACCAAAATAGGTTCAACTGCAAAGAGAGAAAGCATGGTCTGAATATACCAGGAAGTATAATATaGAGTTTTTCACAACTACTC | + |
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Preference number: 2 (lower is better) Translates to: SGDQNRFNCKERKHGLNIPGSII*SFSQLL Trigger: GAGTAGTTGTGAAAAACTGCATATTATACTTCCTGG...TATATTCAGACCATGCTTTCTCTCTTTGCAGTTGAACCTATTTTGGTCTCCACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR-3UTR CCA 90 bp | TGTGTTTGTAGTGTTAAATACCTGCTTAACTGGGGTATGTGTTTCCTAAGTGTGATCATCATTCCATTATaGAGATTTGACTTAGCCCAT | + |
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Preference number: 2 (lower is better) Translates to: CVCSVKYLLNWGMCFLSVIIIPL*RFDLAH Trigger: ATGGGCTAAGTCAAATCTCCATAATGGAATGATGAT...CACACTTAGGAAACACATACCCCAGTTAAGCAGGTATTTAACACTACAAACACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| 3UTR TCA 72 bp | GGGCTGTCAGGGCATGGAAGGCAGATGGGCAGGACATaGGGCAGCTGGTCACGTGGCTTCGGATTTGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: GLSGHGRQMGRT*GSWSRGFGFGK Trigger: CTTTCCAAATCCGAAGCCACGTGACCAGCTGCCTCATGTCCTGCCCATCTGCCTTCCATGCCCTGACAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| 3UTR TCA 72 bp | GATGGGCTCTGGGAAGGACTGAGACTAAGAGGAGGCTaGGAATCTGTCTCTCCAGGGAACCCTCCCCTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: DGLWEGLRLRGG*ESVSPGNPPLW Trigger: CCAAAGGGGAGGGTTCCCTGGAGAGACAGATTCTCAGCCTCCTCTTAGTCTCAGTCCTTCCCAGAGCCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| 3UTR CCA 72 bp | TTTGGCTCACAATACGGTACAAGGGCTGTCAGGGCATaGAAGGCAGATGGGCAGGACATGAGGCAGCTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: FGSQYGTRAVRA*KADGQDMRQLV Trigger: GACCAGCTGCCTCATGTCCTGCCCATCTGCCTTCCATGCCCTGACAGCCCTTGTACCGTATTGTGAGCCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| 3UTR CCA 72 bp | CAGGACATGAGGCAGCTGGTCACGTGGCTTCGGATTTaGAAAGCAGAGGAAGATGAAGGTTTGTCTGTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: QDMRQLVTWLRI*KAEEDEGLSVH Trigger: GTGAACAGACAAACCTTCATCTTCCTCTGCTTTCCAAATCCGAAGCCACGTGACCAGCTGCCTCATGTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| 3UTR TCA 72 bp | CAAGCTGAGACCCCATTTCTCAGTCTCAGAGTTGTGTaGGCTCACATGCAACCACACACTTCCATTAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: QAETPFLSLRVV*AHMQPHTSISQ Trigger: CTGGCTAATGGAAGTGTGTGGTTGCATGTGAGCTCACACAACTCTGAGACTGAGAAATGGGGTCTCAGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| 3UTR TCA 72 bp | GGACTCTCATCTACCTACCCCATTGCCCCTGTCCACTaGATCATTTCAGAGAGTTCACTGTGGTCCCATACA | + |
|
Preference number: 3 (lower is better) Translates to: GLSSTYPIAPVH*IISESSLWSHT Trigger: TGTATGGGACCACAGTGAACTCTCTGAAATGATTCAGTGGACAGGGGCAATGGGGTAGGTAGATGAGAGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| 3UTR GCA 72 bp | CCCCATTTCTCAGTCTCAGAGTTGTGTGAGCTCACATaGAACCACACACTTCCATTAGCCAGTGACTGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: PHFSVSELCELT*NHTLPLASDWS Trigger: TGACCAGTCACTGGCTAATGGAAGTGTGTGGTTGCATGTGAGCTCACACAACTCTGAGACTGAGAAATGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| 3UTR-3UTR CAA 90 bp | AGCTGGTCACGTGGCTTCGGATTTGGAAAGCAGAGGAAGATGAAGGTTTGTCTGAGGGAACCCTCCCCTTaGGCATCTCTTAGAAATAGA | + |
|
Preference number: 3 (lower is better) Translates to: SWSRGFGFGKQRKMKVCLREPSP*ASLRNR Trigger: TCTATTTCTAAGAGATGCCAAAGGGGAGGGTTCCCT...CAGACAAACCTTCATCTTCCTCTGCTTTCCAAATCCGAAGCCACGTGACCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| 3UTR TCA 72 bp | CTTTGGATAGGTTCAGAAGCAGAAGGTTGGGAATTCTaGCCTGCCAAAGTCTCAAGGCATTCACACCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LWIGSEAEGWEF*PAKVSRHSHPQ Trigger: CTGAGGGTGTGAATGCCTTGAGACTTTGGCAGGTCAGAATTCCCAACCTTCTGCTTCTGAACCTATCCAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| 3UTR GCA 72 bp | GATAGGTTCAGAAGCAGAAGGTTGGGAATTCTGACCTaGCAAAGTCTCAAGGCATTCACACCCTCAGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: DRFRSRRLGILT*QSLKAFTPSEQ Trigger: CTGTTCTGAGGGTGTGAATGCCTTGAGACTTTGGCAGGTCAGAATTCCCAACCTTCTGCTTCTGAACCTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| 3UTR CCA 72 bp | ACTCCTATCACTGTCCCCATTCCAGGACAAATGAAGTaGCTCAGACCCTCAGAATTCGAAAGCCAACTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: TPITVPIPGQMK*LRPSEFESQLK Trigger: CTTGAGTTGGCTTTCGAATTCTGAGGGTCTGAGCCACTTCATTTGTCCTGGAATGGGGACAGTGATAGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| 3UTR-3UTR CAA 90 bp | ATAGTGTTGCCTTCTTACCATGCTTCTGTTACAGCTAACTCCTATCACTGTCCCCTCCAGAGGGAAGACTaGGAGGGAAATAGAAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: IVLPSYHASVTANSYHCPLQRED*EGNRSG Trigger: CCCACTTCTATTTCCCTCCAAGTCTTCCCTCTGGAG...GGGACAGTGATAGGAGTTAGCTGTAACAGAAGCATGGTAAGAAGGCAACACTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| 3UTR TCA 72 bp | GGTCACGTGGCTTCGGATTTGGAAAGCAGAGGAAGATaGAGGTTTGTCTGTTCACTTTCTCTAGACCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: GHVASDLESRGR*RFVCSLSLDPL Trigger: CAAAGGGTCTAGAGAAAGTGAACAGACAAACCTTCATCTTCCTCTGCTTTCCAAATCCGAAGCCACGTGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| 3UTR GCA 72 bp | CTGGCCTTGGATGACAACATTGCTTGGCACTTGAGATaGAGGACCACCTTTGTGACTGTGTTTGTAGTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: LALDDNIAWHLR*RTTFVTVFVVL Trigger: TAACACTACAAACACAGTCACAAAGGTGGTCCTGCATCTCAAGTGCCAAGCAATGTTGTCATCCAAGGCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| 3UTR CCA 72 bp | TACTTTGGAAGCTTAAAGGGCTCCAGAGGGAAGACTTaGAGGGAAATAGAAGTGGGTTTCTTAGGGACCAGA | + |
|
Preference number: 3 (lower is better) Translates to: YFGSLKGSRGKT*REIEVGFLGTR Trigger: TCTGGTCCCTAAGAAACCCACTTCTATTTCCCTCCAAGTCTTCCCTCTGGAGCCCTTTAAGCTTCCAAAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| 3UTR CCA 72 bp | AAGCAATTCTCAGGTCAAGCAATCCTGAAAATGCTGTaGGGCCCCCACACATATCTCTTATGTCTGTCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: KQFSGQAILKML*GPHTYLLCLSK Trigger: CTTTGACAGACATAAGAGATATGTGTGGGGGCCCCACAGCATTTTCAGGATTGCTTGACCTGAGAATTGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGGATAGTGTTGCCTTCTTACCATGCTTCTGTTACAGCTAACTCCTATCACGCTCATGGGGCACTTTaGTCCTCATGGAGAGTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: RRIVLPSYHASVTANSYHAHGAL*SSWRVF Trigger: AAAAACTCTCCATGAGGACAAAAGTGCCCCATGAGC...GTGATAGGAGTTAGCTGTAACAGAAGCATGGTAAGAAGGCAACACTATCCTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| 3UTR TCA 72 bp | CTGACAATAAAGTACTGTATCATGCTGCAATCAAGCTaGGACCCCATTTCTCAGTCTCAGAGTTGTGTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: LTIKYCIMLQSS*DPISQSQSCVS Trigger: GCTCACACAACTCTGAGACTGAGAAATGGGGTCTCAGCTTGATTGCAGCATGATACAGTACTTTATTGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| 3UTR TCA 72 bp | GCATCTCTTAGAAATAGATGGTGGCATTCAGCACCATaGAAATTACTGAGATGCCCAAGACTGAACTGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: ASLRNRWWHSAP*KLLRCPRLNCG Trigger: GCCACAGTTCAGTCTTGGGCATCTCAGTAATTTTCATGGTGCTGAATGCCACCATCTATTTCTAAGAGATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| 3UTR GCA 72 bp | AGAATAAGAGGAAGGACAAAGACCAACACAAAGCCGTaGTGTGGTAGGAGAGACGGTGTTTTTACAGCATTT | + |
|
Preference number: 3 (lower is better) Translates to: RIRGRTKTNTKP*CGRRDGVFTAF Trigger: AAATGCTGTAAAAACACCGTCTCTCCTACCACAGCACGGCTTTGTGTTGGTCTTTGTCCTTCCTCTTATTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTTTGTAGTGTTAAATACCTGCTTAACTGGGGTATGTGTTTCCTAAGTGTGTTCTCAGTCTCAGAGTaGTGTGAGCTCACATGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: CVCSVKYLLNWGMCFLSVFSVSE*CELTCN Trigger: GTTGCATGTGAGCTCACACAACTCTGAGACTGAGAA...CACACTTAGGAAACACATACCCCAGTTAAGCAGGTATTTAACACTACAAACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| 3UTR GCA 72 bp | GCCATCAATATTCGATTGGAACCAGGAAGTATAATATaGAGTTTTTCACAACTACTCTGGTCCTCAGTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: AINIRLEPGSII*SFSQLLWSSVD Trigger: GTCCACTGAGGACCAGAGTAGTTGTGAAAAACTGCATATTATACTTCCTGGTTCCAATCGAATATTGATGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| 3UTR TCA 72 bp | ATCTGGTTTCTACCACACAAGGTGATTAAATTGAATTaGGAACCTCAAGAGAATAAGAACCTGTGGTTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: IWFLPHKVIKLN*EPQENKNLWLG Trigger: CCCCAACCACAGGTTCTTATTCTCTTGAGGTTCTCAATTCAATTTAATCACCTTGTGTGGTAGAAACCAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| 3UTR GCA 72 bp | CTTACTTATCTTCAGGACACAGACGAGCCTTTCATATaGTCACAGGATTGCCAATCCTTAATGAAACTACAA | + |
|
Preference number: 3 (lower is better) Translates to: LTYLQDTDEPFI*SQDCQSLMKLQ Trigger: TTGTAGTTTCATTAAGGATTGGCAATCCTGTGAGCATATGAAAGGCTCGTCTGTGTCCTGAAGATAAGTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| 3UTR CCA 72 bp | GAAATTCTGTCCTTTCTTCTCTATGGCTCCTGCCTGTaGAAAGTTGTCATTGGTTCTTACAAAATGATTCAC | + |
|
Preference number: 3 (lower is better) Translates to: EILSFLLYGSCL*KVVIGSYKMIH Trigger: GTGAATCATTTTGTAAGAACCAATGACAACTTTCCACAGGCAGGAGCCATAGAGAAGAAAGGACAGAATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| 3UTR GCA 72 bp | ACTCAAGAGGTGAGAAATCCTGGATATTTATCCAGGTaGATAAGCCACATATCATGTAATAAAGATGGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: TQEVRNPGYLSR*ISHISCNKDGV Trigger: AACTCCATCTTTATTACATGATATGTGGCTTATGCACCTGGATAAATATCCAGGATTTCTCACCTCTTGAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| 3UTR CCA 72 bp | AAATCAAATTGCTTCCAATGGAGGATAATAAAAATATaGCCGAAGACTCAAAGACAGCTCAGCCTTCCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: KSNCFQWRIIKI*PKTQRQLSLPK Trigger: TTTAGGAAGGCTGAGCTGTCTTTGAGTCTTCGGCCATATTTTTATTATCCTCCATTGGAAGCAATTTGATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| 3UTR CCA 72 bp | TCTCAAATTTCAGGTCCAAAATCAAATTGCTTCCAATaGAGGATAATAAAAATATGGCCGAAGACTCAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SQISGPKSNCFQ*RIIKIWPKTQR Trigger: TCTTTGAGTCTTCGGCCATATTTTTATTATCCTCCATTGGAAGCAATTTGATTTTGGACCTGAAATTTGAGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| CDS-3UTR TCA 90 bp | CTTCTGTTACAGCTAACTCCTATCACTGTCCCCATTCCAGGACAAATGAAGTGGGATGGGGTTCCTCTTTaGCACCAGACCCCTCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLQLTPITVPIPGQMKWDGVPL*HQTPQG Trigger: GCCCTGAGGGGTCTGGTGTCAAAGAGGAACCCCATC...CCACTTCATTTGTCCTGGAATGGGGACAGTGATAGGAGTTAGCTGTAACAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| CDS-3UTR CCA 90 bp | AGCTGGTCACGTGGCTTCGGATTTGGAAAGCAGAGGAAGATGAAGGTTTGTCTGCACTGTTCACGTAGGTaGAGCTGCAGGAGAGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SWSRGFGFGKQRKMKVCLHCSRR*SCRREA Trigger: TGCTTCTCTCCTGCAGCTCCACCTACGTGAACAGTG...CAGACAAACCTTCATCTTCCTCTGCTTTCCAAATCCGAAGCCACGTGACCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| 3UTR CAA 72 bp | TCCTCTCTGGCCTTGGATGACAACATTGCTTGGCACTaGAGATGCAGGACCACCTTTGTGACTGTGTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SSLALDDNIAWH*RCRTTFVTVFV Trigger: TACAAACACAGTCACAAAGGTGGTCCTGCATCTCAAGTGCCAAGCAATGTTGTCATCCAAGGCCAGAGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| CDS-3UTR CCA 90 bp | TGGCCGAAGACTCAAAGACAGCTCAGCCTTCCTAAATCAAATATCAATTTCTATGGGCAGCTGGTACTGTaGGTGCTCAGAGAAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: WPKTQRQLSLPKSNINFYGQLVL*VLREAL Trigger: CAGGGCTTCTCTGAGCACCCACAGTACCAGCTGCCC...ATAGAAATTGATATTTGATTTAGGAAGGCTGAGCTGTCTTTGAGTCTTCGGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| CDS-3UTR CCA 90 bp | TTTATGCTTAGAAGGAGAGTTCCAATTGACTCCCTGCTTCTGCCAAGCATGATCAGCCACCGTAGGAGATaGGGTTCCTCTTTGACACCA | + |
|
Preference number: 4 (lower is better) Translates to: FMLRRRVPIDSLLLPSMISHRRR*GSSLTP Trigger: TGGTGTCAAAGAGGAACCCCATCTCCTACGGTGGCT...GATCATGCTTGGCAGAAGCAGGGAGTCAATTGGAACTCTCCTTCTAAGCATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| CDS-3UTR GCA 90 bp | GCATTCACACCCTCAGAACAGACAAAGCAGGACCCAGAGGCTGGGTTTTTCTTCTCAGGAAGTTCAATATaGCATAAAAGGCATCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AFTPSEQTKQDPEAGFFFSGSSI*HKRHQP Trigger: TGGCTGATGCCTTTTATGGCATATTGAACTTCCTGA...GAAGAAAAACCCAGCCTCTGGGTCCTGCTTTGTCTGTTCTGAGGGTGTGAATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| CDS-3UTR CCA 90 bp | TGGAAATTCTGTCCTTTCTTCTCTATGGCTCCTGCCTGTGGAAAGTTGTCATTGAAAAACAAGGGCAGCTaGTACTGTGGGTGCTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WKFCPFFSMAPACGKLSLKNKGS*YCGCSE Trigger: CTCTGAGCACCCACAGTACCAGCTGCCCTTGTTTTT...CAATGACAACTTTCCACAGGCAGGAGCCATAGAGAAGAAAGGACAGAATTTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| 3UTR CAA 72 bp | TTACTTTGGAAGCTTAAAGGGCTCCAGAGGGAAGACTaGGAGGGAAATAGAAGTGGGTTTCTTAGGGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLWKLKGLQRED*EGNRSGFLRDQ Trigger: CTGGTCCCTAAGAAACCCACTTCTATTTCCCTCCAAGTCTTCCCTCTGGAGCCCTTTAAGCTTCCAAAGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| 3UTR CAA 72 bp | TCAAGGTCTTGTCACATTTTCACTTCCTCTCTGGCCTaGGATGACAACATTGCTTGGCACTTGAGATGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRSCHIFTSSLA*DDNIAWHLRCR Trigger: CCTGCATCTCAAGTGCCAAGCAATGTTGTCATCCAAGGCCAGAGAGGAAGTGAAAATGTGACAAGACCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| CDS-3UTR TCA 90 bp | ATAGTGTTGCCTTCTTACCATGCTTCTGTTACAGCTAACTCCTATCACTGTCCCTTTCTGCTTCCCTTCTaGTGTCCGCATCTTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IVLPSYHASVTANSYHCPFLLPF*CPHLQD Trigger: ATCCTGAAGATGCGGACATCAGAAGGGAAGCAGAAA...GGGACAGTGATAGGAGTTAGCTGTAACAGAAGCATGGTAAGAAGGCAACACTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| CDS-3UTR GCA 90 bp | CTCCAGAGGGAAGACTTGGAGGGAAATAGAAGTGGGTTTCTTAGGGACCAGAGTTGCTACAGAATGCTTTaGTCATCATGGTGCTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: LQREDLEGNRSGFLRDQSCYRML*SSWCCN Trigger: ATTACAGCACCATGATGAGCAAAGCATTCTGTAGCA...ACTCTGGTCCCTAAGAAACCCACTTCTATTTCCCTCCAAGTCTTCCCTCTGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| CDS-3UTR GCA 90 bp | TGGAAATTCTGTCCTTTCTTCTCTATGGCTCCTGCCTGTGGAAAGTTGTCATTGCAACATGCTACAGAATaGTTTGCTCATCATGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WKFCPFFSMAPACGKLSLQHATE*FAHHGA Trigger: AGCACCATGATGAGCAAAGCATTCTGTAGCATGTTG...CAATGACAACTTTCCACAGGCAGGAGCCATAGAGAAGAAAGGACAGAATTTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| CDS-3UTR GCA 90 bp | AGAAGGATAGTGTTGCCTTCTTACCATGCTTCTGTTACAGCTAACTCCTATCACGCACACCAGCCAATTTaGTCTTCTCTGCATTATAGC | + |
|
Preference number: 4 (lower is better) Translates to: RRIVLPSYHASVTANSYHAHQPI*SSLHYS Trigger: GCTATAATGCAGAGAAGAGCAAATTGGCTGGTGTGC...GTGATAGGAGTTAGCTGTAACAGAAGCATGGTAAGAAGGCAACACTATCCTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| CDS-3UTR CCA 90 bp | AGAAGGATAGTGTTGCCTTCTTACCATGCTTCTGTTACAGCTAACTCCTATCACTCTCTGCATTATAGCTaGAGACAGGGCTTATGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: RRIVLPSYHASVTANSYHSLHYS*RQGLCR Trigger: CCTACATAAGCCCTGTCTCCAGCTATAATGCAGAGA...GTGATAGGAGTTAGCTGTAACAGAAGCATGGTAAGAAGGCAACACTATCCTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| 3UTR CAA 72 bp | TGTCCAGCTTTATTCAGAAACACCAGAAGGATAGTGTaGCCTTCTTACCATGCTTCTGTTACAGCTAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: CPALFRNTRRIV*PSYHASVTANS Trigger: GGAGTTAGCTGTAACAGAAGCATGGTAAGAAGGCAACACTATCCTTCTGGTGTTTCTGAATAAAGCTGGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| 3UTR CAA 72 bp | CTTGAGAAGAGAAACTTGCAGAATAAAGGCTTTATTTaGGCTCACAATACGGTACAAGGGCTGTCAGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LEKRNLQNKGFI*AHNTVQGLSGH Trigger: ATGCCCTGACAGCCCTTGTACCGTATTGTGAGCCAAAATAAAGCCTTTATTCTGCAAGTTTCTCTTCTCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| CDS-3UTR TCA 90 bp | TTGCCACAAGGGTTTCTAACACAAGGAACAGACTCAAGATCTCTCTGCATTGATAATGATGAAGCCGTATaGCACAATGGTCATCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LPQGFLTQGTDSRSLCIDNDEAV*HNGHQE Trigger: TTCCTGATGACCATTGTGTCATACGGCTTCATCATT...ATCAATGCAGAGAGATCTTGAGTCTGTTCCTTGTGTTAGAAACCCTTGTGGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| CDS-3UTR CCA 90 bp | TTGCCACAAGGGTTTCTAACACAAGGAACAGACTCAAGATCTCTCTGCATTGATAGCCGTATGACACAATaGTCATCAGGAAGTTCAATA | + |
|
Preference number: 4 (lower is better) Translates to: LPQGFLTQGTDSRSLCIDSRMTQ*SSGSSI Trigger: TATTGAACTTCCTGATGACCATTGTGTCATACGGCT...ATCAATGCAGAGAGATCTTGAGTCTGTTCCTTGTGTTAGAAACCCTTGTGGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| CDS-3UTR GCA 90 bp | AGTGGAGACCAAAATAGGTTCAACTGCAAAGAGAGAAAGCATGGTCTGAATATACAATTTGCTCTTCTCTaGATTATAGCTGGAGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGDQNRFNCKERKHGLNIQFALL*IIAGDR Trigger: CCTGTCTCCAGCTATAATGCAGAGAAGAGCAAATTG...TATATTCAGACCATGCTTTCTCTCTTTGCAGTTGAACCTATTTTGGTCTCCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| 3UTR CAA 72 bp | TTAACCCCATTAGCTCAGGCAGCCATCAATATTCGATaGGAACCAGGAAGTATAATATGCAGTTTTTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LTPLAQAAINIR*EPGSIICSFSQ Trigger: TTGTGAAAAACTGCATATTATACTTCCTGGTTCCAATCGAATATTGATGGCTGCCTGAGCTAATGGGGTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| 3UTR CAA 72 bp | AAAGCATGGTCTGAATATAAAGGACCTGTTTTAAGTTaGCAGAACAGGGTAAACATGTCTAGACTGAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KAWSEYKGPVLS*QNRVNMSRLKE Trigger: CTCTTTCAGTCTAGACATGTTTACCCTGTTCTGCAAACTTAAAACAGGTCCTTTATATTCAGACCATGCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
||
| 3UTR CAA 72 bp | TTGAAAGTGTTTTCAGTGAGCATCTCTCCTATAGCTTaGATGTTTGATTTTTGTAAGGACCATGCAATGCGA | + |
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Preference number: 4 (lower is better) Translates to: LKVFSVSISPIA*MFDFCKDHAMR Trigger: TCGCATTGCATGGTCCTTACAAAAATCAAACATCAAAGCTATAGGAGAGATGCTCACTGAAAACACTTTCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| CDS TCA 90 bp | ATGACATTGGGCCCACAGAAGCTCAAGCGAGTCATCAGTCCTGTGTaGATGGCTGTGTTGAAAGCGCAGAGTGCCCACACTCCAGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: MTLGPQKLKRVISPV*MAVLKAQSAHTPAA Trigger: GGCTGCTGGAGTGTGGGCACTCTGCGCTTTCAACACAGCCATTCACACAGGACTGATGACTCGCTTGAGCTTCTGTGGGCCCAATGTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065786.4 ENSMUST00000203700.3 |
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| CDS-3UTR CAA 90 bp | GCATTCACACCCTCAGAACAGACAAAGCAGGACCCAGAGGCTGGGTTTTTCTTCAGACCCCTCAGGGCCTaGGGCATAATGGAGGAGGTA | + |
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Preference number: 5 (lower is better) Translates to: AFTPSEQTKQDPEAGFFFRPLRA*GIMEEV Trigger: TACCTCCTCCATTATGCCCAAGGCCCTGAGGGGTCT...GAAGAAAAACCCAGCCTCTGGGTCCTGCTTTGTCTGTTCTGAGGGTGTGAATGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203700.3 |
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| CDS GCA 90 bp | AGGGCTCAACATGGTATACAGCACACCAGCCAATTTGCTCTTCTCTaGATTATAGCTGGAGACAGGGCTTATGTAGGCATAGAAGACAGC | + |
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Preference number: 5 (lower is better) Translates to: RAQHGIQHTSQFALL*IIAGDRAYVGIEDS Trigger: GCTGTCTTCTATGCCTACATAAGCCCTGTCTCCAGCTATAATGCAGAGAAGAGCAAATTGGCTGGTGTGCTGTATACCATGTTGAGCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065786.4 ENSMUST00000203700.3 |
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| CDS CCA 90 bp | TGGTATACAGCACACCAGCCAATTTGCTCTTCTCTGCATTATAGCTaGAGACAGGGCTTATGTAGGCATAGAAGACAGCGGTGTAATACA | + |
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Preference number: 5 (lower is better) Translates to: WYTAHQPICSSLHYS*RQGLCRHRRQRCNT Trigger: TGTATTACACCGCTGTCTTCTATGCCTACATAAGCCCTGTCTCCAGCTATAATGCAGAGAAGAGCAAATTGGCTGGTGTGCTGTATACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065786.4 ENSMUST00000203700.3 |
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| CDS TCA 72 bp | GGCCATGCAGCCACCGTAGGAGATGGGGTTCCTCTTTaGCACCAGACCCCTCAGGGCCTTGGGCATAATGGA | + |
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Preference number: 6 (lower is better) Translates to: GHAATVGDGVPL*HQTPQGLGHNG Trigger: TCCATTATGCCCAAGGCCCTGAGGGGTCTGGTGTCAAAGAGGAACCCCATCTCCTACGGTGGCTGCATGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065786.4 ENSMUST00000203700.3 |
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| CDS TCA 72 bp | GGCCCACAGAAGCTCAAGCGAGTCATCAGTCCTGTGTaGATGGCTGTGTTGAAAGCGCAGAGTGCCCACACT | + |
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Preference number: 6 (lower is better) Translates to: GPQKLKRVISPV*MAVLKAQSAHT Trigger: AGTGTGGGCACTCTGCGCTTTCAACACAGCCATTCACACAGGACTGATGACTCGCTTGAGCTTCTGTGGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065786.4 ENSMUST00000203700.3 |
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| CDS CCA 72 bp | GCACACCAGCCAATTTGCTCTTCTCTGCATTATAGCTaGAGACAGGGCTTATGTAGGCATAGAAGACAGCGG | + |
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Preference number: 6 (lower is better) Translates to: AHQPICSSLHYS*RQGLCRHRRQR Trigger: CCGCTGTCTTCTATGCCTACATAAGCCCTGTCTCCAGCTATAATGCAGAGAAGAGCAAATTGGCTGGTGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065786.4 ENSMUST00000203700.3 |
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| CDS GCA 72 bp | CATGGTATACAGCACACCAGCCAATTTGCTCTTCTCTaGATTATAGCTGGAGACAGGGCTTATGTAGGCATA | + |
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Preference number: 6 (lower is better) Translates to: HGIQHTSQFALL*IIAGDRAYVGI Trigger: TATGCCTACATAAGCCCTGTCTCCAGCTATAATGCAGAGAAGAGCAAATTGGCTGGTGTGCTGTATACCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065786.4 ENSMUST00000203700.3 |
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| CDS TCA 72 bp | CCGCATCTTCAGGATGCTGGAAATGATGAAGCCGTATaGCACAATGGTCATCAGGAAGTTCAATATGCCATA | + |
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Preference number: 6 (lower is better) Translates to: PHLQDAGNDEAV*HNGHQEVQYAI Trigger: TATGGCATATTGAACTTCCTGATGACCATTGTGTCATACGGCTTCATCATTTCCAGCATCCTGAAGATGCGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065786.4 ENSMUST00000203700.3 |
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