RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR204 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000095928

Ensembl transcript IDs: ENSMUST00000216261.2

Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGCATACCACAAGAAGACCAACAGGGTCAACTAACCTGGACTCTTaGGGGCTCCCAGAGACTGAGCCACCAACCAAGGATGGGCTAGAT +
Preference number: 1 (lower is better)
Translates to: RHTTRRPTGSTNLDS*GLPETEPPTKDGLD
Trigger: ATCTAGCCCATCCTTGGTTGGTGGCTCAGTCTCTGGGAGCCCCCAAGAGTCCAGGTTAGTTGACCCTGTTGGTCTTCTTGTGGTATGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR GCA 90 bp GTCTCTTGTGAGACTATGCCGGGGCCTAGCAAACACAGAAGTGGATaGTCACAGTCAGCTAATGGATGGATCACAGGGCTCCCAATGGAG +
Preference number: 1 (lower is better)
Translates to: VSCETMPGPSKHRSG*SQSANGWITGLPME
Trigger: CTCCATTGGGAGCCCTGTGATCCATCCATTAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCACAAGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR GCA 90 bp CCTTCTGGGAACATTTCTCGTCTTCCAACTTGTGGGTCCTGGGACTaGTATTCAGTCTGCCAGACTCGGAGTAGGCATCTCATTGCTGAT +
Preference number: 1 (lower is better)
Translates to: PSGNISRLPTCGSWD*YSVCQTRSRHLIAD
Trigger: ATCAGCAATGAGATGCCTACTCCGAGTCTGGCAGACTGAATAGCAGTCCCAGGACCCACAAGTTGGAAGACGAGAAATGTTCCCAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR CCA 90 bp AGAAAGCCTTCTGGGAACATTTCTCGTCTTCCAACTTGTGGGTCCTaGGACTGCTATTCAGTCTGCCAGACTCGGAGTAGGCATCTCATT +
Preference number: 1 (lower is better)
Translates to: RKPSGNISRLPTCGS*DCYSVCQTRSRHLI
Trigger: AATGAGATGCCTACTCCGAGTCTGGCAGACTGAATAGCAGTCCCAGGACCCACAAGTTGGAAGACGAGAAATGTTCCCAGAAGGCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR TCA 90 bp AAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGATaGAAGGATGGACCATCTAGAGACTGCCATATCCAGGGATCCACC +
Preference number: 1 (lower is better)
Translates to: KHPWKELQRQSLELR*KDGPSRDCHIQGST
Trigger: GGTGGATCCCTGGATATGGCAGTCTCTAGATGGTCCATCCTTTCATCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR GCA 90 bp ATTTCTCGTCTTCCAACTTGTGGGTCCTGGGACTGCTATTCAGTCTaGCAGACTCGGAGTAGGCATCTCATTGCTGATTTATCTAGAAAC +
Preference number: 1 (lower is better)
Translates to: ISRLPTCGSWDCYSV*QTRSRHLIADLSRN
Trigger: GTTTCTAGATAAATCAGCAATGAGATGCCTACTCCGAGTCTGGCAGACTGAATAGCAGTCCCAGGACCCACAAGTTGGAAGACGAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR TCA 90 bp ACTCCCAGTGGGCAGGTAAGGACAGCAACCCACTCACAAAACCTTTaGCCCAAAATATGTACTGCCTACAAGATATGCAGGGACAAATAT +
Preference number: 1 (lower is better)
Translates to: TPSGQVRTATHSQNL*PKICTAYKICRDKY
Trigger: ATATTTGTCCCTGCATATCTTGTAGGCAGTACATATTTTGGGTCAAAGGTTTTGTGAGTGGGTTGCTGTCCTTACCTGCCCACTGGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR TCA 90 bp GAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTaGGGTAACACATTCACAAATGAACTCACAGGATATGTACTCACT +
Preference number: 1 (lower is better)
Translates to: EIPSQMDGPGGHHPE*GNTFTNELTGYVLT
Trigger: AGTGAGTACATATCCTGTGAGTTCATTTGTGAATGTGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCATTTGGCTAGGAATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR CCA 90 bp ATCCAACAACTGATCAAATCAGATGCAGAGACCCACCACATAAAATaGAGCTCTAGGAGTCTGAGAAAGAGCTGGAGAAAGGTTTGTAGG +
Preference number: 1 (lower is better)
Translates to: IQQLIKSDAETHHIK*SSRSLRKSWRKVCR
Trigger: CCTACAAACCTTTCTCCAGCTCTTTCTCAGACTCCTAGAGCTCCATTTTATGTGGTGGGTCTCTGCATCTGATTTGATCAGTTGTTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR CCA 90 bp TGCACCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTaGAAAGAACCCAGAAGCCCCTCAACAGAGGAATGGATACAGAAA +
Preference number: 1 (lower is better)
Translates to: CTTMFIAALFIIARS*KEPRSPSTEEWIQK
Trigger: TTTCTGTATCCATTCCTCTGTTGAGGGGCTTCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR GCA 90 bp GCAGGTGTAGACAGGCACCGGAGTCACATATTAACATTTATCAAATaGATGAGGTCAGTCCATATGACTTACGAATTTATTGAAAAACAA +
Preference number: 1 (lower is better)
Translates to: AGVDRHRSHILTFIK*MRSVHMTYEFIEKQ
Trigger: TTGTTTTTCAATAAATTCGTAAGTCATATGGACTGACCTCATGCATTTGATAAATGTTAATATGTGACTCCGGTGCCTGTCTACACCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR CCA 90 bp AACACATTCACAAATGAACTCACAGGATATGTACTCACTGATAAGTaGATATTAGCCCAAAACCTAGGATACCCAAGGTATAAGATACAA +
Preference number: 1 (lower is better)
Translates to: NTFTNELTGYVLTDK*ILAQNLGYPRYKIQ
Trigger: TTGTATCTTATACCTTGGGTATCCTAGGTTTTGGGCTAATATCCACTTATCAGTGAGTACATATCCTGTGAGTTCATTTGTGAATGTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR-3UTR CCA 90 bp TGTACTAGAGAGAAAGCCCACAACTCCTACCCCAAATCTAGTGTCAGACATAGTGGGGGCTACATACCATaGTGTTCAGGTGGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: CTREKAHNSYPKSSVRHSGGYIP*CSGGWG
Trigger: CCCCCACCCACCTGAACACCATGGTATGTAGCCCCC...ACTATGTCTGACACTAGATTTGGGGTAGGAGTTGTGGGCTTTCTCTCTAGTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR-3UTR GCA 90 bp AGGCAGCACTCCCAGTGGGCAGGTAAGGACAGCAACCCACTCACAAAACCTTTGACCCAAAATATGTACTaGCTACAAGATATGCAGGGA +
Preference number: 2 (lower is better)
Translates to: RQHSQWAGKDSNPLTKPLTQNMY*LQDMQG
Trigger: TCCCTGCATATCTTGTAGGCAGTACATATTTTGGGT...CAAAGGTTTTGTGAGTGGGTTGCTGTCCTTACCTGCCCACTGGGAGTGCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR CAA 90 bp CACTCCCAGTGGGCAGGTAAGGACAGCAACCCACTCACAAAACCTTaGACCCAAAATATGTACTGCCTACAAGATATGCAGGGACAAATA +
Preference number: 2 (lower is better)
Translates to: HSQWAGKDSNPLTKP*TQNMYCLQDMQGQI
Trigger: TATTTGTCCCTGCATATCTTGTAGGCAGTACATATTTTGGGTCAAAGGTTTTGTGAGTGGGTTGCTGTCCTTACCTGCCCACTGGGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR-3UTR TCA 90 bp AAAAATTACAAGATAACCATGCCACAATCCTCAGATCAAAAGAAACCAGGTATCGGGGCTCCCAGAGACTaGGCCACCAACCAAGGATGG +
Preference number: 2 (lower is better)
Translates to: KNYKITMPQSSDQKKPGIGAPRD*ATNQGW
Trigger: CCATCCTTGGTTGGTGGCTCAGTCTCTGGGAGCCCC...GATACCTGGTTTCTTTTGATCTGAGGATTGTGGCATGGTTATCTTGTAATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR-3UTR TCA 90 bp ACTGGAAAGAGAGGCCCATTGGACATGCAAATTTTATATGCCCCAGTACAGGGGTGGGAGAGGAGAGAATaGGGAAATGTTATAGGGGTA +
Preference number: 2 (lower is better)
Translates to: TGKRGPLDMQILYAPVQGWERRE*GNVIGV
Trigger: TACCCCTATAACATTTCCTCATTCTCTCCTCTCCCA...CCCCTGTACTGGGGCATATAAAATTTGCATGTCCAATGGGCCTCTCTTTCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR-3UTR GCA 90 bp AGGCAGCACTCCCAGTGGGCAGGTAAGGACAGCAACCCACTCACAAAACCTTTGACTAAGTTGTCAAAGTaGATACTGCTTTTTCAGAAG +
Preference number: 2 (lower is better)
Translates to: RQHSQWAGKDSNPLTKPLTKLSK*ILLFQK
Trigger: CTTCTGAAAAAGCAGTATGCACTTTGACAACTTAGT...CAAAGGTTTTGTGAGTGGGTTGCTGTCCTTACCTGCCCACTGGGAGTGCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR-3UTR GCA 90 bp CCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGATGAAAGGATGGACCGAGGCCCATTGGACATaGAAATTTTATATGCCCCAG +
Preference number: 2 (lower is better)
Translates to: PMEGVTETKFGAEMKGWTEAHWT*KFYMPQ
Trigger: CTGGGGCATATAAAATTTGCATGTCCAATGGGCCTC...GGTCCATCCTTTCATCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR CAA 90 bp CCTGTGGATTCTGATTTCCTAACGGGTCTACCTTTTCTGGCCTTTTaGAAAGAGGATGTGCCTAGTCCTTCATTGATTTCATGTGCCATG +
Preference number: 2 (lower is better)
Translates to: PVDSDFLTGLPFLAF*KEDVPSPSLISCAM
Trigger: CATGGCACATGAAATCAATGAAGGACTAGGCACATCCTCTTTCAAAAAGGCCAGAAAAGGTAGACCCGTTAGGAAATCAGAATCCACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR-3UTR GCA 90 bp TGCATACTGCTTTTTCAGAAGTTCAGAGCTCCATTCCAAGAACCCCACTCAGCCTTAAGCTCTCTCTATTaGTCCATAGAGCACCAAGAA +
Preference number: 2 (lower is better)
Translates to: CILLFQKFRAPFQEPHSALSSLY*SIEHQE
Trigger: TTCTTGGTGCTCTATGGAGCAATAGAGAGAGCTTAA...GGCTGAGTGGGGTTCTTGGAATGGAGCTCTGAACTTCTGAAAAAGCAGTATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR-3UTR CCA 90 bp CCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGATGAAAGGATGGACCGGTATGGGGCACTTTTaGTATAGCATTGGAAATGTA +
Preference number: 2 (lower is better)
Translates to: PMEGVTETKFGAEMKGWTGMGHF*YSIGNV
Trigger: TACATTTCCAATGCTATACCAAAAGTGCCCCATACC...GGTCCATCCTTTCATCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR-3UTR TCA 90 bp ATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGATGAAAGGATGGACCATCTGGAGGTGGGAGGAGTaGATCTTTCATGTAAAAAGA +
Preference number: 2 (lower is better)
Translates to: MEGVTETKFGAEMKGWTIWRWEE*IFHVKR
Trigger: TCTTTTTACATGAAAGATTCACTCCTCCCACCTCCA...GATGGTCCATCCTTTCATCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR-3UTR TCA 90 bp AAAAATTACAAGATAACCATGCCACAATCCTCAGATCAAAAGAAACCAGGTATCGGAGCTCTAGGAGTCTaGGAAAGAGCTGGAGAAAGG +
Preference number: 2 (lower is better)
Translates to: KNYKITMPQSSDQKKPGIGALGV*ERAGER
Trigger: CCTTTCTCCAGCTCTTTCTCAGACTCCTAGAGCTCC...GATACCTGGTTTCTTTTGATCTGAGGATTGTGGCATGGTTATCTTGTAATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR-3UTR GCA 90 bp ATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGATGAAAGGATGGACCATCACTGCCTACAAGATATaGAGGGACAAATATAGAGCA +
Preference number: 2 (lower is better)
Translates to: MEGVTETKFGAEMKGWTITAYKI*RDKYRA
Trigger: TGCTCTATATTTGTCCCTGCATATCTTGTAGGCAGT...GATGGTCCATCCTTTCATCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR-3UTR TCA 90 bp CCAAAATATGTACTGCCTACAAGATATGCAGGGACAAATATAGAGCAGAGTTGTCTTTTCTGGCCTTTTTaGAAGAGGATGTGCCTAGTC +
Preference number: 2 (lower is better)
Translates to: PKYVLPTRYAGTNIEQSCLFWPF*KRMCLV
Trigger: GACTAGGCACATCCTCTTTCAAAAAGGCCAGAAAAG...ACAACTCTGCTCTATATTTGTCCCTGCATATCTTGTAGGCAGTACATATTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR-3UTR TCA 90 bp AAATATGTACTGCCTACAAGATATGCAGGGACAAATATAGAGCAGAGTTGTAAGAACATTTATCTTTATTaGTGGGGGCTACATACCATG +
Preference number: 2 (lower is better)
Translates to: KYVLPTRYAGTNIEQSCKNIYLY*WGLHTM
Trigger: CATGGTATGTAGCCCCCATCAATAAAGATAAATGTT...CTTACAACTCTGCTCTATATTTGTCCCTGCATATCTTGTAGGCAGTACATATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR CCA 72 bp GAAGTGCCACTTTCTGCACCTAGGCAGCACTCCCAGTaGGCAGGTAAGGACAGCAACCCACTCACAAAACCT +
Preference number: 3 (lower is better)
Translates to: EVPLSAPRQHSQ*AGKDSNPLTKP
Trigger: AGGTTTTGTGAGTGGGTTGCTGTCCTTACCTGCCCACTGGGAGTGCTGCCTAGGTGCAGAAAGTGGCACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR GCA 72 bp GTGAAACTCCTAGTAGAGGAGATCTGGATCCTGAAGTaGCACTTTCTGCACCTAGGCAGCACTCCCAGTGGG +
Preference number: 3 (lower is better)
Translates to: VKLLVEEIWILK*HFLHLGSTPSG
Trigger: CCCACTGGGAGTGCTGCCTAGGTGCAGAAAGTGGCACTTCAGGATCCAGATCTCCTCTACTAGGAGTTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR GCA 72 bp GAGACTATGCCGGGGCCTAGCAAACACAGAAGTGGATaGTCACAGTCAGCTAATGGATGGATCACAGGGCTC +
Preference number: 3 (lower is better)
Translates to: ETMPGPSKHRSG*SQSANGWITGL
Trigger: GAGCCCTGTGATCCATCCATTAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR CCA 72 bp TCTGGGAACATTTCTCGTCTTCCAACTTGTGGGTCCTaGGACTGCTATTCAGTCTGCCAGACTCGGAGTAGG +
Preference number: 3 (lower is better)
Translates to: SGNISRLPTCGS*DCYSVCQTRSR
Trigger: CCTACTCCGAGTCTGGCAGACTGAATAGCAGTCCCAGGACCCACAAGTTGGAAGACGAGAAATGTTCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR TCA 72 bp AGATTGAGACCCATCCCATGGCCAAGAGTCAGTCCCTaGCTGAAGGATACTCCCTTGTGCTTACAGACAGCA +
Preference number: 3 (lower is better)
Translates to: RLRPIPWPRVSP*LKDTPLCLQTA
Trigger: TGCTGTCTGTAAGCACAAGGGAGTATCCTTCAGTCAGGGACTGACTCTTGGCCATGGGATGGGTCTCAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR GCA 72 bp AACATTTCTCGTCTTCCAACTTGTGGGTCCTGGGACTaGTATTCAGTCTGCCAGACTCGGAGTAGGCATCTC +
Preference number: 3 (lower is better)
Translates to: NISRLPTCGSWD*YSVCQTRSRHL
Trigger: GAGATGCCTACTCCGAGTCTGGCAGACTGAATAGCAGTCCCAGGACCCACAAGTTGGAAGACGAGAAATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR GCA 72 bp CTTCCAACTTGTGGGTCCTGGGACTGCTATTCAGTCTaGCAGACTCGGAGTAGGCATCTCATTGCTGATTTA +
Preference number: 3 (lower is better)
Translates to: LPTCGSWDCYSV*QTRSRHLIADL
Trigger: TAAATCAGCAATGAGATGCCTACTCCGAGTCTGGCAGACTGAATAGCAGTCCCAGGACCCACAAGTTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR TCA 72 bp TGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGATaGAAGGATGGACCATCTAGAGACTGCCATATCCAG +
Preference number: 3 (lower is better)
Translates to: WKELQRQSLELR*KDGPSRDCHIQ
Trigger: CTGGATATGGCAGTCTCTAGATGGTCCATCCTTTCATCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR GCA 72 bp ACCAACCAAGGATGGGCTAGATCTAGTTTGTGTCCCTaGACATTTGTAGCAGATATGTGGCTTGCTCTTCAT +
Preference number: 3 (lower is better)
Translates to: TNQGWARSSLCP*TFVADMWLALH
Trigger: ATGAAGAGCAAGCCACATATCTGCTACAAATGTGCAGGGACACAAACTAGATCTAGCCCATCCTTGGTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR-3UTR CAA 90 bp CCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGATGAAAGGATGGACCGGAAAGAGAGGCCCATaGGACATGCAAATTTTATAT +
Preference number: 3 (lower is better)
Translates to: PMEGVTETKFGAEMKGWTGKRGP*DMQILY
Trigger: ATATAAAATTTGCATGTCCAATGGGCCTCTCTTTCC...GGTCCATCCTTTCATCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR CCA 72 bp ATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTaGAAAGAACCCAGAAGCCCCTCAACAGAGGAATGG +
Preference number: 3 (lower is better)
Translates to: MFIAALFIIARS*KEPRSPSTEEW
Trigger: CCATTCCTCTGTTGAGGGGCTTCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTGCTATGAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR TCA 72 bp TTTGCTAAACACATGAAACTCAAGAAGAATGAAGACTaGAGTGTGGACACTATGCCCCTCCTTAGAATGGGG +
Preference number: 3 (lower is better)
Translates to: FAKHMKLKKNED*SVDTMPLLRMG
Trigger: CCCCATTCTAAGGAGGGGCATAGTGTCCACACTTCAGTCTTCATTCTTCTTGAGTTTCATGTGTTTAGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR CCA 72 bp GCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTaGAAAGAGAGGCCCATTGGACATGCAAATTTTATA +
Preference number: 3 (lower is better)
Translates to: AYVSKDGLVGHH*KERPIGHANFI
Trigger: TATAAAATTTGCATGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR-3UTR CAA 90 bp AAAAATTACAAGATAACCATGCCACAATCCTCAGATCAAAAGAAACCAGGTATCCCTTTTCTGGCCTTTTaGAAAGAGGATGTGCCTAGT +
Preference number: 3 (lower is better)
Translates to: KNYKITMPQSSDQKKPGIPFLAF*KEDVPS
Trigger: ACTAGGCACATCCTCTTTCAAAAAGGCCAGAAAAGG...GATACCTGGTTTCTTTTGATCTGAGGATTGTGGCATGGTTATCTTGTAATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR CAA 72 bp AAGAAAGCCTTCTGGGAACATTTCTCGTCTTCCAACTaGTGGGTCCTGGGACTGCTATTCAGTCTGCCAGAC +
Preference number: 4 (lower is better)
Translates to: KKAFWEHFSSSN*WVLGLLFSLPD
Trigger: GTCTGGCAGACTGAATAGCAGTCCCAGGACCCACAAGTTGGAAGACGAGAAATGTTCCCAGAAGGCTTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
CDS-3UTR GCA 90 bp TTGGGACAAACATTCCTCAAGAATAGGGAGGGGGAATGGGTTTGTAATACGAGGTCACAGAGGATGACGTaGAGGCATCAGCAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: LGQTFLKNREGEWVCNTRSQRMT*RHQQRP
Trigger: TGGCCTTTGCTGATGCCTGCACGTCATCCTCTGTGA...CCTCGTATTACAAACCCATTCCCCCTCCCTATTCTTGAGGAATGTTTGTCCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR CAA 72 bp CTGGCCTTTTTGAAAGAGGATGTGCCTAGTCCTTCATaGATTTCATGTGCCATGGGAAGGAGGGGATACCCA +
Preference number: 4 (lower is better)
Translates to: LAFLKEDVPSPS*ISCAMGRRGYP
Trigger: TGGGTATCCCCTCCTTCCCATGGCACATGAAATCAATGAAGGACTAGGCACATCCTCTTTCAAAAAGGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
CDS-3UTR CCA 90 bp TGCATACTGCTTTTTCAGAAGTTCAGAGCTCCATTCCAAGAACCCCACTCAGCCCAGTACAGAGTCTCTTaGACATCACCACTAGATAGA +
Preference number: 4 (lower is better)
Translates to: CILLFQKFRAPFQEPHSAQYRVS*TSPLDR
Trigger: TCTATCTAGTGGTGATGTCCAAGAGACTCTGTACTG...GGCTGAGTGGGGTTCTTGGAATGGAGCTCTGAACTTCTGAAAAAGCAGTATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR CAA 72 bp TGGGCAGGTAAGGACAGCAACCCACTCACAAAACCTTaGACCCAAAATATGTACTGCCTACAAGATATGCAG +
Preference number: 4 (lower is better)
Translates to: WAGKDSNPLTKP*TQNMYCLQDMQ
Trigger: CTGCATATCTTGTAGGCAGTACATATTTTGGGTCAAAGGTTTTGTGAGTGGGTTGCTGTCCTTACCTGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
CDS-3UTR TCA 90 bp CCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGATGAAAGGATGGACCTCGCATAGAGTGGCATaGTTTCACAGTAGAAATGAT +
Preference number: 4 (lower is better)
Translates to: PMEGVTETKFGAEMKGWTSHRVA*FHSRND
Trigger: ATCATTTCTACTGTGAAATCATGCCACTCTATGCGA...GGTCCATCCTTTCATCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
CDS-3UTR CCA 90 bp TGCATACTGCTTTTTCAGAAGTTCAGAGCTCCATTCCAAGAACCCCACTCAGCCAGAAATCGCATAGAGTaGCATGATTTCACAGTAGAA +
Preference number: 4 (lower is better)
Translates to: CILLFQKFRAPFQEPHSARNRIE*HDFTVE
Trigger: TTCTACTGTGAAATCATGCCACTCTATGCGATTTCT...GGCTGAGTGGGGTTCTTGGAATGGAGCTCTGAACTTCTGAAAAAGCAGTATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR CAA 72 bp ATCCACCCCATAATCAGCTTTCAAACGCTGACACCATaGCATACACTAGCAAGATTTTATCGAAAGGACCCA +
Preference number: 4 (lower is better)
Translates to: IHPIISFQTLTP*HTLARFYRKDP
Trigger: TGGGTCCTTTCGATAAAATCTTGCTAGTGTATGCAATGGTGTCAGCGTTTGAAAGCTGATTATGGGGTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2
3UTR CAA 72 bp TCTGATTTCCTAACGGGTCTACCTTTTCTGGCCTTTTaGAAAGAGGATGTGCCTAGTCCTTCATTGATTTCA +
Preference number: 4 (lower is better)
Translates to: SDFLTGLPFLAF*KEDVPSPSLIS
Trigger: TGAAATCAATGAAGGACTAGGCACATCCTCTTTCAAAAAGGCCAGAAAAGGTAGACCCGTTAGGAAATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216261.2