Pregenerated sensors for OLFR203 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068182Ensembl transcript IDs: ENSMUST00000089305.2, ENSMUST00000215893.2
Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS CCA 90 bp | TTGTATCACAGCAGCAAAAATGAAGACCACAAATGCATTAATAGATaGGTCGGTGCAAGAAATTGTATAGAGTGGCAGGATCTCACAGTA | + |
Preference number: 5 (lower is better) Translates to: LYHSSKNEDHKCINR*VGARNCIEWQDLTV Trigger: TACTGTGAGATCCTGCCACTCTATACAATTTCTTGCACCGACCCATCTATTAATGCATTTGTGGTCTTCATTTTTGCTGCTGTGATACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089305.2 ENSMUST00000215893.2 |
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CDS GCA 72 bp | GAAAACCGATTATATATGAGCCACTTATCAGGCAAGTaGACACTCTGTTGGACATCACCACAAGATAGAGCA | + |
Preference number: 6 (lower is better) Translates to: ENRLYMSHLSGK*TLCWTSPQDRA Trigger: TGCTCTATCTTGTGGTGATGTCCAACAGAGTGTGCACTTGCCTGATAAGTGGCTCATATATAATCGGTTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089305.2 ENSMUST00000215893.2 |
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CDS CCA 72 bp | TATATGAGCCACTTATCAGGCAAGTGCACACTCTGTTaGACATCACCACAAGATAGAGCAAAGGATTGCATA | + |
Preference number: 6 (lower is better) Translates to: YMSHLSGKCTLC*TSPQDRAKDCI Trigger: TATGCAATCCTTTGCTCTATCTTGTGGTGATGTCCAACAGAGTGTGCACTTGCCTGATAAGTGGCTCATATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089305.2 ENSMUST00000215893.2 |
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CDS CAA 72 bp | GGCATAGGAGACTGCAATACTCATGAAGGTAACAGCTaGTATCACAGCAGCAAAAATGAAGACCACAAATGC | + |
Preference number: 6 (lower is better) Translates to: GIGDCNTHEGNS*YHSSKNEDHKC Trigger: GCATTTGTGGTCTTCATTTTTGCTGCTGTGATACAAGCTGTTACCTTCATGAGTATTGCAGTCTCCTATGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089305.2 ENSMUST00000215893.2 |
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CDS CAA 90 bp | CATGGTAGTGACATAGATGAAGAAGAACACCAAGAACATGGGAACTaGCAGCTCTGGAAGATCTGTTATTCCTCTGAGAATAAACGCAGT | + |
Preference number: 6 (lower is better) Translates to: HGSDIDEEEHQEHGN*QLWKICYSSENKRS Trigger: ACTGCGTTTATTCTCAGAGGAATAACAGATCTTCCAGAGCTGCAAGTTCCCATGTTCTTGGTGTTCTTCTTCATCTATGTCACTACCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089305.2 ENSMUST00000215893.2 |
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CDS CAA 90 bp | GAGGACGTGGGCATAGGAGACTGCAATACTCATGAAGGTAACAGCTaGTATCACAGCAGCAAAAATGAAGACCACAAATGCATTAATAGA | + |
Preference number: 6 (lower is better) Translates to: EDVGIGDCNTHEGNS*YHSSKNEDHKCINR Trigger: TCTATTAATGCATTTGTGGTCTTCATTTTTGCTGCTGTGATACAAGCTGTTACCTTCATGAGTATTGCAGTCTCCTATGCCCACGTCCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089305.2 ENSMUST00000215893.2 |
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CDS CAA 72 bp | GACATAGATGAAGAAGAACACCAAGAACATGGGAACTaGCAGCTCTGGAAGATCTGTTATTCCTCTGAGAAT | + |
Preference number: 6 (lower is better) Translates to: DIDEEEHQEHGN*QLWKICYSSEN Trigger: ATTCTCAGAGGAATAACAGATCTTCCAGAGCTGCAAGTTCCCATGTTCTTGGTGTTCTTCTTCATCTATGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089305.2 ENSMUST00000215893.2 |
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CDS CCA 72 bp | AGCAGCAAAAATGAAGACCACAAATGCATTAATAGATaGGTCGGTGCAAGAAATTGTATAGAGTGGCAGGAT | + |
Preference number: 6 (lower is better) Translates to: SSKNEDHKCINR*VGARNCIEWQD Trigger: ATCCTGCCACTCTATACAATTTCTTGCACCGACCCATCTATTAATGCATTTGTGGTCTTCATTTTTGCTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089305.2 ENSMUST00000215893.2 |