RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR203 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000068182

Ensembl transcript IDs: ENSMUST00000089305.2, ENSMUST00000215893.2

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp TTGTATCACAGCAGCAAAAATGAAGACCACAAATGCATTAATAGATaGGTCGGTGCAAGAAATTGTATAGAGTGGCAGGATCTCACAGTA +
Preference number: 5 (lower is better)
Translates to: LYHSSKNEDHKCINR*VGARNCIEWQDLTV
Trigger: TACTGTGAGATCCTGCCACTCTATACAATTTCTTGCACCGACCCATCTATTAATGCATTTGTGGTCTTCATTTTTGCTGCTGTGATACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000089305.2
ENSMUST00000215893.2
CDS GCA 72 bp GAAAACCGATTATATATGAGCCACTTATCAGGCAAGTaGACACTCTGTTGGACATCACCACAAGATAGAGCA +
Preference number: 6 (lower is better)
Translates to: ENRLYMSHLSGK*TLCWTSPQDRA
Trigger: TGCTCTATCTTGTGGTGATGTCCAACAGAGTGTGCACTTGCCTGATAAGTGGCTCATATATAATCGGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089305.2
ENSMUST00000215893.2
CDS CCA 72 bp TATATGAGCCACTTATCAGGCAAGTGCACACTCTGTTaGACATCACCACAAGATAGAGCAAAGGATTGCATA +
Preference number: 6 (lower is better)
Translates to: YMSHLSGKCTLC*TSPQDRAKDCI
Trigger: TATGCAATCCTTTGCTCTATCTTGTGGTGATGTCCAACAGAGTGTGCACTTGCCTGATAAGTGGCTCATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089305.2
ENSMUST00000215893.2
CDS CAA 72 bp GGCATAGGAGACTGCAATACTCATGAAGGTAACAGCTaGTATCACAGCAGCAAAAATGAAGACCACAAATGC +
Preference number: 6 (lower is better)
Translates to: GIGDCNTHEGNS*YHSSKNEDHKC
Trigger: GCATTTGTGGTCTTCATTTTTGCTGCTGTGATACAAGCTGTTACCTTCATGAGTATTGCAGTCTCCTATGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000089305.2
ENSMUST00000215893.2
CDS CAA 90 bp CATGGTAGTGACATAGATGAAGAAGAACACCAAGAACATGGGAACTaGCAGCTCTGGAAGATCTGTTATTCCTCTGAGAATAAACGCAGT +
Preference number: 6 (lower is better)
Translates to: HGSDIDEEEHQEHGN*QLWKICYSSENKRS
Trigger: ACTGCGTTTATTCTCAGAGGAATAACAGATCTTCCAGAGCTGCAAGTTCCCATGTTCTTGGTGTTCTTCTTCATCTATGTCACTACCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089305.2
ENSMUST00000215893.2
CDS CAA 90 bp GAGGACGTGGGCATAGGAGACTGCAATACTCATGAAGGTAACAGCTaGTATCACAGCAGCAAAAATGAAGACCACAAATGCATTAATAGA +
Preference number: 6 (lower is better)
Translates to: EDVGIGDCNTHEGNS*YHSSKNEDHKCINR
Trigger: TCTATTAATGCATTTGTGGTCTTCATTTTTGCTGCTGTGATACAAGCTGTTACCTTCATGAGTATTGCAGTCTCCTATGCCCACGTCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000089305.2
ENSMUST00000215893.2
CDS CAA 72 bp GACATAGATGAAGAAGAACACCAAGAACATGGGAACTaGCAGCTCTGGAAGATCTGTTATTCCTCTGAGAAT +
Preference number: 6 (lower is better)
Translates to: DIDEEEHQEHGN*QLWKICYSSEN
Trigger: ATTCTCAGAGGAATAACAGATCTTCCAGAGCTGCAAGTTCCCATGTTCTTGGTGTTCTTCTTCATCTATGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089305.2
ENSMUST00000215893.2
CDS CCA 72 bp AGCAGCAAAAATGAAGACCACAAATGCATTAATAGATaGGTCGGTGCAAGAAATTGTATAGAGTGGCAGGAT +
Preference number: 6 (lower is better)
Translates to: SSKNEDHKCINR*VGARNCIEWQD
Trigger: ATCCTGCCACTCTATACAATTTCTTGCACCGACCCATCTATTAATGCATTTGTGGTCTTCATTTTTGCTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000089305.2
ENSMUST00000215893.2