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Pregenerated sensors for OLFR20 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000062128

Ensembl transcript IDs: ENSMUST00000108465.4, ENSMUST00000120137.3

Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AATTTCTCTATTTGTTGTTTGCCTCTGTGTGTGTGTGCACGCATGTaGGCGCACCACAGCACATGCATGCATATTAGAAGGCACCTAATG +
Preference number: 1 (lower is better)
Translates to: NFSICCLPLCVCARM*AHHSTCMHIRRHLM
Trigger: CATTAGGTGCCTTCTAATATGCATGCATGTGCTGTGGTGCGCGCACATGCGTGCACACACACACAGAGGCAAACAACAAATAGAGAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000120137.3
3UTR CCA 90 bp CAGTTATTTATAAATGCCTTATCCCAGCATGCAATAAGAGCTGTGTaGTTATCATCAAACATGGTAAGTGCTTTTGCTTGCAAACCTATA +
Preference number: 1 (lower is better)
Translates to: QLFINALSQHAIRAV*LSSNMVSAFACKPI
Trigger: TATAGGTTTGCAAGCAAAAGCACTTACCATGTTTGATGATAACCACACAGCTCTTATTGCATGCTGGGATAAGGCATTTATAAATAACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000120137.3
3UTR GCA 90 bp TGCAATAAGAGCTGTGTGGTTATCATCAAACATGGTAAGTGCTTTTaGTTGCAAACCTATACATATGATAATATCATAAACCACACAAGG +
Preference number: 1 (lower is better)
Translates to: CNKSCVVIIKHGKCF*LQTYTYDNIINHTR
Trigger: CCTTGTGTGGTTTATGATATTATCATATGTATAGGTTTGCAAGCAAAAGCACTTACCATGTTTGATGATAACCACACAGCTCTTATTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000120137.3
3UTR-3UTR TCA 90 bp TGCGCGCACCACAGCACATGCATGCATATTAGAAGGCACCTAATGGAAGTAGGTAATGTCCTTACCTGCTaGACCATCTTGATGACCCAC +
Preference number: 2 (lower is better)
Translates to: CAHHSTCMHIRRHLMEVGNVLTC*TILMTH
Trigger: GTGGGTCATCAAGATGGTTCAGCAGGTAAGGACATT...ACCTACTTCCATTAGGTGCCTTCTAATATGCATGCATGTGCTGTGGTGCGCGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000120137.3
3UTR-3UTR GCA 90 bp CGCATGTGCGCGCACCACAGCACATGCATGCATATTAGAAGGCACCTAATGGAAGAAAGATTTTATATATaGCTTCTCAGGGTCACTTTG +
Preference number: 2 (lower is better)
Translates to: RMCAHHSTCMHIRRHLMEERFYI*LLRVTL
Trigger: CAAAGTGACCCTGAGAAGGCATATATAAAATCTTTC...TTCCATTAGGTGCCTTCTAATATGCATGCATGTGCTGTGGTGCGCGCACATGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000120137.3
3UTR GCA 72 bp ATTTGTTGTTTGCCTCTGTGTGTGTGTGCACGCATGTaGGCGCACCACAGCACATGCATGCATATTAGAAGG +
Preference number: 3 (lower is better)
Translates to: ICCLPLCVCARM*AHHSTCMHIRR
Trigger: CCTTCTAATATGCATGCATGTGCTGTGGTGCGCGCACATGCGTGCACACACACACAGAGGCAAACAACAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000120137.3
3UTR GCA 72 bp TTGTCATCAGTTATTTATAAATGCCTTATCCCAGCATaGAATAAGAGCTGTGTGGTTATCATCAAACATGGT +
Preference number: 3 (lower is better)
Translates to: LSSVIYKCLIPA*NKSCVVIIKHG
Trigger: ACCATGTTTGATGATAACCACACAGCTCTTATTGCATGCTGGGATAAGGCATTTATAAATAACTGATGACAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000120137.3
CDS-3UTR TCA 90 bp TGCGCGCACCACAGCACATGCATGCATATTAGAAGGCACCTAATGGAAGTAGGTGGCATCCTGCATAGGTaGTGGATGAGTCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: CAHHSTCMHIRRHLMEVGGILHR*WMSPGS
Trigger: AGAGCCAGGACTCATCCATCACCTATGCAGGATGCC...ACCTACTTCCATTAGGTGCCTTCTAATATGCATGCATGTGCTGTGGTGCGCGCA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000120137.3
CDS-3UTR TCA 90 bp AGGTTCAGCAACAAATGTCCTTACCTGCTGAACCATCTTGATGACCCACAGCATGGAGGAACTGGAAGATaGCAGTTTGGTTCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: RFSNKCPYLLNHLDDPQHGGTGR*QFGSLL
Trigger: CAGAAGGGAACCAAACTGTCATCTTCCAGTTCCTCC...ATGCTGTGGGTCATCAAGATGGTTCAGCAGGTAAGGACATTTGTTGCTGAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000120137.3
CDS-3UTR CCA 90 bp AGGTTCAGCAACAAATGTCCTTACCTGCTGAACCATCTTGATGACCCACAGCATCCCAGGAGGAGGAACTaGAAGATGACAGTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: RFSNKCPYLLNHLDDPQHPRRRN*KMTVWF
Trigger: GAACCAAACTGTCATCTTCCAGTTCCTCCTCCTGGG...ATGCTGTGGGTCATCAAGATGGTTCAGCAGGTAAGGACATTTGTTGCTGAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000120137.3
CDS-3UTR CCA 90 bp ATAAGAGCTGTGTGGTTATCATCAAACATGGTAAGTGCTTTTGCTTGCAAACCTACCAATTCATTAACGTaGGTGTCAGAGCAGGACAGC +
Preference number: 4 (lower is better)
Translates to: IRAVWLSSNMVSAFACKPTNSLT*VSEQDS
Trigger: GCTGTCCTGCTCTGACACCCACGTTAATGAATTGGT...AGGTTTGCAAGCAAAAGCACTTACCATGTTTGATGATAACCACACAGCTCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000120137.3
CDS-3UTR CCA 90 bp CTTGATGACCCACAGCATGTATTGAAAGATTTTATATATGCCTTCTCAGGGTCAAAGGATGAGCACAAATaGAATGACAAGGATCAGGCC +
Preference number: 4 (lower is better)
Translates to: LDDPQHVLKDFIYAFSGSKDEHK*NDKDQA
Trigger: GGCCTGATCCTTGTCATTCCATTTGTGCTCATCCTT...TGACCCTGAGAAGGCATATATAAAATCTTTCAATACATGCTGTGGGTCATCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000120137.3
3UTR CAA 72 bp TACCTGCTGAACCATCTTGATGACCCACAGCATGTATaGAAAGATTTTATATATGCCTTCTCAGGGTCACTT +
Preference number: 4 (lower is better)
Translates to: YLLNHLDDPQHV*KDFIYAFSGSL
Trigger: AAGTGACCCTGAGAAGGCATATATAAAATCTTTCAATACATGCTGTGGGTCATCAAGATGGTTCAGCAGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000120137.3
CDS-3UTR CAA 90 bp TGCGCGCACCACAGCACATGCATGCATATTAGAAGGCACCTAATGGAAGTAGGTCAAGAAAAAGTACATTaGTGTCAGGCATCCTGCATA +
Preference number: 5 (lower is better)
Translates to: CAHHSTCMHIRRHLMEVGQEKVH*CQASCI
Trigger: TATGCAGGATGCCTGACACAAATGTACTTTTTCTTG...ACCTACTTCCATTAGGTGCCTTCTAATATGCATGCATGTGCTGTGGTGCGCGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000120137.3
CDS CCA 90 bp AATGGAGGACACAATTTGTGCATAGGACACAAGGATGAGCACAAATaGAATGACAAGGATCAGGCCTCCTGTGACAAATATCACCAATTC +
Preference number: 5 (lower is better)
Translates to: NGGHNLCIGHKDEHK*NDKDQASCDKYHQF
Trigger: GAATTGGTGATATTTGTCACAGGAGGCCTGATCCTTGTCATTCCATTTGTGCTCATCCTTGTGTCCTATGCACAAATTGTGTCCTCCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108465.4
ENSMUST00000120137.3
CDS TCA 72 bp AGAAGGCTTTACGGATGCCTCGAGCAGACGGGACCTTaGGAATGGAGGACACAATTTGTGCATAGGACACAA +
Preference number: 6 (lower is better)
Translates to: RRLYGCLEQTGP*EWRTQFVHRTQ
Trigger: TTGTGTCCTATGCACAAATTGTGTCCTCCATTCTCAAGGTCCCGTCTGCTCGAGGCATCCGTAAAGCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108465.4
ENSMUST00000120137.3
CDS CCA 72 bp CACAATTTGTGCATAGGACACAAGGATGAGCACAAATaGAATGACAAGGATCAGGCCTCCTGTGACAAATAT +
Preference number: 6 (lower is better)
Translates to: HNLCIGHKDEHK*NDKDQASCDKY
Trigger: ATATTTGTCACAGGAGGCCTGATCCTTGTCATTCCATTTGTGCTCATCCTTGTGTCCTATGCACAAATTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108465.4
ENSMUST00000120137.3