Pregenerated sensors for OLFR20 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062128Ensembl transcript IDs: ENSMUST00000108465.4, ENSMUST00000120137.3
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | AATTTCTCTATTTGTTGTTTGCCTCTGTGTGTGTGTGCACGCATGTaGGCGCACCACAGCACATGCATGCATATTAGAAGGCACCTAATG | + |
Preference number: 1 (lower is better) Translates to: NFSICCLPLCVCARM*AHHSTCMHIRRHLM Trigger: CATTAGGTGCCTTCTAATATGCATGCATGTGCTGTGGTGCGCGCACATGCGTGCACACACACACAGAGGCAAACAACAAATAGAGAAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120137.3 |
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3UTR CCA 90 bp | CAGTTATTTATAAATGCCTTATCCCAGCATGCAATAAGAGCTGTGTaGTTATCATCAAACATGGTAAGTGCTTTTGCTTGCAAACCTATA | + |
Preference number: 1 (lower is better) Translates to: QLFINALSQHAIRAV*LSSNMVSAFACKPI Trigger: TATAGGTTTGCAAGCAAAAGCACTTACCATGTTTGATGATAACCACACAGCTCTTATTGCATGCTGGGATAAGGCATTTATAAATAACTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120137.3 |
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3UTR GCA 90 bp | TGCAATAAGAGCTGTGTGGTTATCATCAAACATGGTAAGTGCTTTTaGTTGCAAACCTATACATATGATAATATCATAAACCACACAAGG | + |
Preference number: 1 (lower is better) Translates to: CNKSCVVIIKHGKCF*LQTYTYDNIINHTR Trigger: CCTTGTGTGGTTTATGATATTATCATATGTATAGGTTTGCAAGCAAAAGCACTTACCATGTTTGATGATAACCACACAGCTCTTATTGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120137.3 |
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3UTR-3UTR TCA 90 bp | TGCGCGCACCACAGCACATGCATGCATATTAGAAGGCACCTAATGGAAGTAGGTAATGTCCTTACCTGCTaGACCATCTTGATGACCCAC | + |
Preference number: 2 (lower is better) Translates to: CAHHSTCMHIRRHLMEVGNVLTC*TILMTH Trigger: GTGGGTCATCAAGATGGTTCAGCAGGTAAGGACATT...ACCTACTTCCATTAGGTGCCTTCTAATATGCATGCATGTGCTGTGGTGCGCGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120137.3 |
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3UTR-3UTR GCA 90 bp | CGCATGTGCGCGCACCACAGCACATGCATGCATATTAGAAGGCACCTAATGGAAGAAAGATTTTATATATaGCTTCTCAGGGTCACTTTG | + |
Preference number: 2 (lower is better) Translates to: RMCAHHSTCMHIRRHLMEERFYI*LLRVTL Trigger: CAAAGTGACCCTGAGAAGGCATATATAAAATCTTTC...TTCCATTAGGTGCCTTCTAATATGCATGCATGTGCTGTGGTGCGCGCACATGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120137.3 |
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3UTR GCA 72 bp | ATTTGTTGTTTGCCTCTGTGTGTGTGTGCACGCATGTaGGCGCACCACAGCACATGCATGCATATTAGAAGG | + |
Preference number: 3 (lower is better) Translates to: ICCLPLCVCARM*AHHSTCMHIRR Trigger: CCTTCTAATATGCATGCATGTGCTGTGGTGCGCGCACATGCGTGCACACACACACAGAGGCAAACAACAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120137.3 |
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3UTR GCA 72 bp | TTGTCATCAGTTATTTATAAATGCCTTATCCCAGCATaGAATAAGAGCTGTGTGGTTATCATCAAACATGGT | + |
Preference number: 3 (lower is better) Translates to: LSSVIYKCLIPA*NKSCVVIIKHG Trigger: ACCATGTTTGATGATAACCACACAGCTCTTATTGCATGCTGGGATAAGGCATTTATAAATAACTGATGACAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120137.3 |
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CDS-3UTR TCA 90 bp | TGCGCGCACCACAGCACATGCATGCATATTAGAAGGCACCTAATGGAAGTAGGTGGCATCCTGCATAGGTaGTGGATGAGTCCTGGCTCT | + |
Preference number: 4 (lower is better) Translates to: CAHHSTCMHIRRHLMEVGGILHR*WMSPGS Trigger: AGAGCCAGGACTCATCCATCACCTATGCAGGATGCC...ACCTACTTCCATTAGGTGCCTTCTAATATGCATGCATGTGCTGTGGTGCGCGCA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120137.3 |
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CDS-3UTR TCA 90 bp | AGGTTCAGCAACAAATGTCCTTACCTGCTGAACCATCTTGATGACCCACAGCATGGAGGAACTGGAAGATaGCAGTTTGGTTCCCTTCTG | + |
Preference number: 4 (lower is better) Translates to: RFSNKCPYLLNHLDDPQHGGTGR*QFGSLL Trigger: CAGAAGGGAACCAAACTGTCATCTTCCAGTTCCTCC...ATGCTGTGGGTCATCAAGATGGTTCAGCAGGTAAGGACATTTGTTGCTGAACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120137.3 |
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CDS-3UTR CCA 90 bp | AGGTTCAGCAACAAATGTCCTTACCTGCTGAACCATCTTGATGACCCACAGCATCCCAGGAGGAGGAACTaGAAGATGACAGTTTGGTTC | + |
Preference number: 4 (lower is better) Translates to: RFSNKCPYLLNHLDDPQHPRRRN*KMTVWF Trigger: GAACCAAACTGTCATCTTCCAGTTCCTCCTCCTGGG...ATGCTGTGGGTCATCAAGATGGTTCAGCAGGTAAGGACATTTGTTGCTGAACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120137.3 |
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CDS-3UTR CCA 90 bp | ATAAGAGCTGTGTGGTTATCATCAAACATGGTAAGTGCTTTTGCTTGCAAACCTACCAATTCATTAACGTaGGTGTCAGAGCAGGACAGC | + |
Preference number: 4 (lower is better) Translates to: IRAVWLSSNMVSAFACKPTNSLT*VSEQDS Trigger: GCTGTCCTGCTCTGACACCCACGTTAATGAATTGGT...AGGTTTGCAAGCAAAAGCACTTACCATGTTTGATGATAACCACACAGCTCTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120137.3 |
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CDS-3UTR CCA 90 bp | CTTGATGACCCACAGCATGTATTGAAAGATTTTATATATGCCTTCTCAGGGTCAAAGGATGAGCACAAATaGAATGACAAGGATCAGGCC | + |
Preference number: 4 (lower is better) Translates to: LDDPQHVLKDFIYAFSGSKDEHK*NDKDQA Trigger: GGCCTGATCCTTGTCATTCCATTTGTGCTCATCCTT...TGACCCTGAGAAGGCATATATAAAATCTTTCAATACATGCTGTGGGTCATCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120137.3 |
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3UTR CAA 72 bp | TACCTGCTGAACCATCTTGATGACCCACAGCATGTATaGAAAGATTTTATATATGCCTTCTCAGGGTCACTT | + |
Preference number: 4 (lower is better) Translates to: YLLNHLDDPQHV*KDFIYAFSGSL Trigger: AAGTGACCCTGAGAAGGCATATATAAAATCTTTCAATACATGCTGTGGGTCATCAAGATGGTTCAGCAGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120137.3 |
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CDS-3UTR CAA 90 bp | TGCGCGCACCACAGCACATGCATGCATATTAGAAGGCACCTAATGGAAGTAGGTCAAGAAAAAGTACATTaGTGTCAGGCATCCTGCATA | + |
Preference number: 5 (lower is better) Translates to: CAHHSTCMHIRRHLMEVGQEKVH*CQASCI Trigger: TATGCAGGATGCCTGACACAAATGTACTTTTTCTTG...ACCTACTTCCATTAGGTGCCTTCTAATATGCATGCATGTGCTGTGGTGCGCGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120137.3 |
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CDS CCA 90 bp | AATGGAGGACACAATTTGTGCATAGGACACAAGGATGAGCACAAATaGAATGACAAGGATCAGGCCTCCTGTGACAAATATCACCAATTC | + |
Preference number: 5 (lower is better) Translates to: NGGHNLCIGHKDEHK*NDKDQASCDKYHQF Trigger: GAATTGGTGATATTTGTCACAGGAGGCCTGATCCTTGTCATTCCATTTGTGCTCATCCTTGTGTCCTATGCACAAATTGTGTCCTCCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108465.4 ENSMUST00000120137.3 |
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CDS TCA 72 bp | AGAAGGCTTTACGGATGCCTCGAGCAGACGGGACCTTaGGAATGGAGGACACAATTTGTGCATAGGACACAA | + |
Preference number: 6 (lower is better) Translates to: RRLYGCLEQTGP*EWRTQFVHRTQ Trigger: TTGTGTCCTATGCACAAATTGTGTCCTCCATTCTCAAGGTCCCGTCTGCTCGAGGCATCCGTAAAGCCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108465.4 ENSMUST00000120137.3 |
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CDS CCA 72 bp | CACAATTTGTGCATAGGACACAAGGATGAGCACAAATaGAATGACAAGGATCAGGCCTCCTGTGACAAATAT | + |
Preference number: 6 (lower is better) Translates to: HNLCIGHKDEHK*NDKDQASCDKY Trigger: ATATTTGTCACAGGAGGCCTGATCCTTGTCATTCCATTTGTGCTCATCCTTGTGTCCTATGCACAAATTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108465.4 ENSMUST00000120137.3 |