Pregenerated sensors for OLFR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070417Ensembl transcript IDs: ENSMUST00000094109.3, ENSMUST00000207280.4, ENSMUST00000208147.3, ENSMUST00000211432.3, ENSMUST00000214105.2, ENSMUST00000216375.2
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GATGGAGTCAGGTGCCTCAGGGCACATAGCTGCAATGCCAACACTTaGGAGATGGAGTCAGGTGCCCCAGGAGTTCAGAAGCTTCTTTCA | + |
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Preference number: 1 (lower is better) Translates to: DGVRCLRAHSCNANT*EMESGAPGVQKLLS Trigger: TGAAAGAAGCTTCTGAACTCCTGGGGCACCTGACTCCATCTCTCAAGTGTTGGCATTGCAGCTATGTGCCCTGAGGCACCTGACTCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR TCA 90 bp | AGCTTTGGTTCACTCCCCAGGGCACATAGCTGCAATGCCAACATTTaGGAGATGGAGTCAGGTGCCTCAGGGCACATAGCTGCAATGCCA | + |
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Preference number: 1 (lower is better) Translates to: SFGSLPRAHSCNANI*EMESGASGHIAAMP Trigger: TGGCATTGCAGCTATGTGCCCTGAGGCACCTGACTCCATCTCTCAAATGTTGGCATTGCAGCTATGTGCCCTGGGGAGTGAACCAAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR CCA 90 bp | TCAGGTGCCTCAGGGCACATAGCTGCAATGCCAACACTTGAGAGATaGAGTCAGGTGCCCCAGGAGTTCAGAAGCTTCTTTCATTACATA | + |
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Preference number: 1 (lower is better) Translates to: SGASGHIAAMPTLER*SQVPQEFRSFFHYI Trigger: TATGTAATGAAAGAAGCTTCTGAACTCCTGGGGCACCTGACTCCATCTCTCAAGTGTTGGCATTGCAGCTATGTGCCCTGAGGCACCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR TCA 90 bp | TACCCAACATCACTGAACAATGGACACACACAAGAAAATCTATGTTaGTCCTTGCTTGACTGTACATGTCCACTGCCTCCTGTCATTCTG | + |
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Preference number: 1 (lower is better) Translates to: YPTSLNNGHTQENLC*SLLDCTCPLPPVIL Trigger: CAGAATGACAGGAGGCAGTGGACATGTACAGTCAAGCAAGGATCAACATAGATTTTCTTGTGTGTGTCCATTGTTCAGTGATGTTGGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR TCA 90 bp | CACAATTATTCTAACCTTTTGATAACACCATGTCAGCCTCCTTTCTaGTTTTCCTTCTCCTCCTCAGACCTCTCTCTGTCTCCTCAACTC | + |
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Preference number: 1 (lower is better) Translates to: HNYSNLLITPCQPPF*FSFSSSDLSLSPQL Trigger: GAGTTGAGGAGACAGAGAGAGGTCTGAGGAGGAGAAGGAAAATCAGAAAGGAGGCTGACATGGTGTTATCAAAAGGTTAGAATAATTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR TCA 90 bp | ACTTCCCTTCTCCTGTCCAATCACAAGCCTCCCACTGCCCTAATGTaGTTGAAAAGGGAAAATCCTGCAACACTGTACTTTATTTCTTAT | + |
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Preference number: 1 (lower is better) Translates to: TSLLLSNHKPPTALM*LKRENPATLYFISY Trigger: ATAAGAAATAAAGTACAGTGTTGCAGGATTTTCCCTTTTCAATCACATTAGGGCAGTGGGAGGCTTGTGATTGGACAGGAGAAGGGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCCTAGCTTCACTTCCCTTCTCCTGTCCAATCACAAGCCTCCCACTGCCCTATGCAATGCCAACACTTaGGAGATGGAGTCAGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: TPSFTSLLLSNHKPPTALCNANT*EMESGA Trigger: GGCACCTGACTCCATCTCTCAAGTGTTGGCATTGCA...TAGGGCAGTGGGAGGCTTGTGATTGGACAGGAGAAGGGAAGTGAAGCTAGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCCTAGCTTCACTTCCCTTCTCCTGTCCAATCACAAGCCTCCCACTGCCCTATGCAATGCCAACATTTaGGAGATGGAGTCAGGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: TPSFTSLLLSNHKPPTALCNANI*EMESGA Trigger: GGCACCTGACTCCATCTCTCAAATGTTGGCATTGCA...TAGGGCAGTGGGAGGCTTGTGATTGGACAGGAGAAGGGAAGTGAAGCTAGGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR-3UTR GCA 90 bp | ACTCCTAGCTTCACTTCCCTTCTCCTGTCCAATCACAAGCCTCCCACTGCCCTAGAAGAACATTCCCACTaGATATCATTGACCCACTCA | + |
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Preference number: 2 (lower is better) Translates to: TPSFTSLLLSNHKPPTALEEHSH*ISLTHS Trigger: TGAGTGGGTCAATGATATGCAGTGGGAATGTTCTTC...TAGGGCAGTGGGAGGCTTGTGATTGGACAGGAGAAGGGAAGTGAAGCTAGGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCCTAGCTTCACTTCCCTTCTCCTGTCCAATCACAAGCCTCCCACTGCCCTACCTTACTCCATATACTaGATCCCTATCCTGCAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: TPSFTSLLLSNHKPPTALPYSIY*IPILQK Trigger: TTTCTGCAGGATAGGGATCCAGTATATGGAGTAAGG...TAGGGCAGTGGGAGGCTTGTGATTGGACAGGAGAAGGGAAGTGAAGCTAGGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCCTAGCTTCACTTCCCTTCTCCTGTCCAATCACAAGCCTCCCACTGCCCTAGTGTATACACAATACTaGTCCAAGCCTTACTCCATA | + |
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Preference number: 2 (lower is better) Translates to: TPSFTSLLLSNHKPPTALVYTQY*SKPYSI Trigger: TATGGAGTAAGGCTTGGACCAGTATTGTGTATACAC...TAGGGCAGTGGGAGGCTTGTGATTGGACAGGAGAAGGGAAGTGAAGCTAGGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR-3UTR CCA 90 bp | ATGCCAACACTTGAGAGATGGAGTCAGGTGCCCCAGGAGTTCAGAAGCTTCTTTGTGTATACACAATACTaGTCCAAGCCTTACTCCATA | + |
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Preference number: 2 (lower is better) Translates to: MPTLERWSQVPQEFRSFFVYTQY*SKPYSI Trigger: TATGGAGTAAGGCTTGGACCAGTATTGTGTATACAC...AAAGAAGCTTCTGAACTCCTGGGGCACCTGACTCCATCTCTCAAGTGTTGGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCCTAGCTTCACTTCCCTTCTCCTGTCCAATCACAAGCCTCCCACTGCCCTAAACATCACTGAACAATaGACACACACAAGAAAATCT | + |
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Preference number: 2 (lower is better) Translates to: TPSFTSLLLSNHKPPTALNITEQ*THTRKS Trigger: AGATTTTCTTGTGTGTGTCCATTGTTCAGTGATGTT...TAGGGCAGTGGGAGGCTTGTGATTGGACAGGAGAAGGGAAGTGAAGCTAGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR-3UTR GCA 90 bp | TTGACCCACTCAGAAACAACTTCTGGAAGGATAGTCATTTCTAAACTTTTAAACAGAGATGGAGTCAGGTaGCTCAGGGCACATAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: LTHSETTSGRIVISKLLNRDGVR*LRAHSC Trigger: GCAGCTATGTGCCCTGAGGCACCTGACTCCATCTCT...GTTTAAAAGTTTAGAAATGACTATCCTTCCAGAAGTTGTTTCTGAGTGGGTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR-3UTR CCA 90 bp | TTGACCCACTCAGAAACAACTTCTGGAAGGATAGTCATTTCTAAACTTTTAAACCCAACACTTGAGAGATaGAGTCAGGTGCCCCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: LTHSETTSGRIVISKLLNPTLER*SQVPQE Trigger: CTCCTGGGGCACCTGACTCCATCTCTCAAGTGTTGG...GTTTAAAAGTTTAGAAATGACTATCCTTCCAGAAGTTGTTTCTGAGTGGGTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR-3UTR GCA 90 bp | TTGACCCACTCAGAAACAACTTCTGGAAGGATAGTCATTTCTAAACTTTTAAACAGAGATGGAGTCAGGTaGCCCAGGAGTTCAGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: LTHSETTSGRIVISKLLNRDGVR*PRSSEA Trigger: AGCTTCTGAACTCCTGGGGCACCTGACTCCATCTCT...GTTTAAAAGTTTAGAAATGACTATCCTTCCAGAAGTTGTTTCTGAGTGGGTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR-3UTR TCA 90 bp | TTGACCCACTCAGAAACAACTTCTGGAAGGATAGTCATTTCTAAACTTTTAAACTGCAATGCCAACATTTaGGAGATGGAGTCAGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: LTHSETTSGRIVISKLLNCNANI*EMESGA Trigger: GGCACCTGACTCCATCTCTCAAATGTTGGCATTGCA...GTTTAAAAGTTTAGAAATGACTATCCTTCCAGAAGTTGTTTCTGAGTGGGTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCATGTAACAACTAAAATTATGATGCCCAGAGAAGAACATTCCCACTGCATATGCAATGCCAACATTTaGGAGATGGAGTCAGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: IHVTTKIMMPREEHSHCICNANI*EMESGA Trigger: GGCACCTGACTCCATCTCTCAAATGTTGGCATTGCA...TATGCAGTGGGAATGTTCTTCTCTGGGCATCATAATTTTAGTTGTTACATGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR-3UTR GCA 90 bp | TTGACCCACTCAGAAACAACTTCTGGAAGGATAGTCATTTCTAAACTTTTAAACACTGGATCCCTATCCTaGAGAAATCCAGCCTCTACC | + |
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Preference number: 2 (lower is better) Translates to: LTHSETTSGRIVISKLLNTGSLS*RNPAST Trigger: GGTAGAGGCTGGATTTCTGCAGGATAGGGATCCAGT...GTTTAAAAGTTTAGAAATGACTATCCTTCCAGAAGTTGTTTCTGAGTGGGTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCATGTAACAACTAAAATTATGATGCCCAGAGAAGAACATTCCCACTGCATAAGCAAAACAAAGCTTTaGTTCACTCCCCAGGGCACA | + |
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Preference number: 2 (lower is better) Translates to: IHVTTKIMMPREEHSHCISKTKL*FTPQGT Trigger: TGTGCCCTGGGGAGTGAACCAAAGCTTTGTTTTGCT...TATGCAGTGGGAATGTTCTTCTCTGGGCATCATAATTTTAGTTGTTACATGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR-3UTR TCA 90 bp | TTGACCCACTCAGAAACAACTTCTGGAAGGATAGTCATTTCTAAACTTTTAAACTCTTGCCAGCAAGACTaGAATAATTTGTACCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: LTHSETTSGRIVISKLLNSCQQD*NNLYLC Trigger: GCAGAGGTACAAATTATTTCAGTCTTGCTGGCAAGA...GTTTAAAAGTTTAGAAATGACTATCCTTCCAGAAGTTGTTTCTGAGTGGGTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR-3UTR GCA 90 bp | ATTCATGTAACAACTAAAATTATGATGCCCAGAGAAGAACATTCCCACTGCATAGATCAGTTGGTAGGGTaGTTGCATAGCAAAACAAAG | + |
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Preference number: 2 (lower is better) Translates to: IHVTTKIMMPREEHSHCIDQLVG*LHSKTK Trigger: CTTTGTTTTGCTATGCAAGCACCCTACCAACTGATC...TATGCAGTGGGAATGTTCTTCTCTGGGCATCATAATTTTAGTTGTTACATGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR-3UTR CCA 90 bp | TTGACCCACTCAGAAACAACTTCTGGAAGGATAGTCATTTCTAAACTTTTAAACGTGTATACACAATACTaGTCCAAGCCTTACTCCATA | + |
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Preference number: 2 (lower is better) Translates to: LTHSETTSGRIVISKLLNVYTQY*SKPYSI Trigger: TATGGAGTAAGGCTTGGACCAGTATTGTGTATACAC...GTTTAAAAGTTTAGAAATGACTATCCTTCCAGAAGTTGTTTCTGAGTGGGTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR-3UTR TCA 90 bp | TTGACCCACTCAGAAACAACTTCTGGAAGGATAGTCATTTCTAAACTTTTAAACAGAATAGGAGTCTATTaGCCACTCTCTCATTATCTA | + |
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Preference number: 2 (lower is better) Translates to: LTHSETTSGRIVISKLLNRIGVY*PLSHYL Trigger: TAGATAATGAGAGAGTGGTCAATAGACTCCTATTCT...GTTTAAAAGTTTAGAAATGACTATCCTTCCAGAAGTTGTTTCTGAGTGGGTCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR TCA 72 bp | AGGTGCCTCAGGGCACATAGCTGCAATGCCAACACTTaGGAGATGGAGTCAGGTGCCCCAGGAGTTCAGAAG | + |
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Preference number: 3 (lower is better) Translates to: RCLRAHSCNANT*EMESGAPGVQK Trigger: CTTCTGAACTCCTGGGGCACCTGACTCCATCTCTCAAGTGTTGGCATTGCAGCTATGTGCCCTGAGGCACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR-3UTR CAA 90 bp | ACTCCTAGCTTCACTTCCCTTCTCCTGTCCAATCACAAGCCTCCCACTGCCCTACTGCAATGCCAACACTaGAGAGATGGAGTCAGGTGC | + |
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Preference number: 3 (lower is better) Translates to: TPSFTSLLLSNHKPPTALLQCQH*RDGVRC Trigger: GCACCTGACTCCATCTCTCAAGTGTTGGCATTGCAG...TAGGGCAGTGGGAGGCTTGTGATTGGACAGGAGAAGGGAAGTGAAGCTAGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR CCA 72 bp | TCAGGGCACATAGCTGCAATGCCAACACTTGAGAGATaGAGTCAGGTGCCCCAGGAGTTCAGAAGCTTCTTT | + |
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Preference number: 3 (lower is better) Translates to: SGHIAAMPTLER*SQVPQEFRSFF Trigger: AAAGAAGCTTCTGAACTCCTGGGGCACCTGACTCCATCTCTCAAGTGTTGGCATTGCAGCTATGTGCCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR-3UTR CAA 90 bp | ACTCCTAGCTTCACTTCCCTTCTCCTGTCCAATCACAAGCCTCCCACTGCCCTATCCCACTGCATATCATaGACCCACTCAGAAACAACT | + |
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Preference number: 3 (lower is better) Translates to: TPSFTSLLLSNHKPPTALSHCIS*THSETT Trigger: AGTTGTTTCTGAGTGGGTCAATGATATGCAGTGGGA...TAGGGCAGTGGGAGGCTTGTGATTGGACAGGAGAAGGGAAGTGAAGCTAGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR GCA 72 bp | CACTTCCCTTCTCCTGTCCAATCACAAGCCTCCCACTaGCCTAATGTGATTGAAAAGGGAAAATCCTGCAAC | + |
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Preference number: 3 (lower is better) Translates to: HFPSPVQSQASH*PNVIEKGKSCN Trigger: GTTGCAGGATTTTCCCTTTTCAATCACATTAGGGCAGTGGGAGGCTTGTGATTGGACAGGAGAAGGGAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR-3UTR CAA 90 bp | ACTCCTAGCTTCACTTCCCTTCTCCTGTCCAATCACAAGCCTCCCACTGCCCTAAAGAATAGGAGTCTATaGACCACTCTCTCATTATCT | + |
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Preference number: 3 (lower is better) Translates to: TPSFTSLLLSNHKPPTALKNRSL*TTLSLS Trigger: AGATAATGAGAGAGTGGTCAATAGACTCCTATTCTT...TAGGGCAGTGGGAGGCTTGTGATTGGACAGGAGAAGGGAAGTGAAGCTAGGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR-3UTR CAA 90 bp | ACTCCTAGCTTCACTTCCCTTCTCCTGTCCAATCACAAGCCTCCCACTGCCCTATATAAGGCTATACTATaGATGAAAAGGTTGAGAGGC | + |
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Preference number: 3 (lower is better) Translates to: TPSFTSLLLSNHKPPTALYKAIL*MKRLRG Trigger: GCCTCTCAACCTTTTCATCAATAGTATAGCCTTATA...TAGGGCAGTGGGAGGCTTGTGATTGGACAGGAGAAGGGAAGTGAAGCTAGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR TCA 72 bp | TGGACACACACAAGAAAATCTATGTTGATCCTTGCTTaGCTGTACATGTCCACTGCCTCCTGTCATTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: WTHTRKSMLILA*LYMSTASCHSG Trigger: CCCAGAATGACAGGAGGCAGTGGACATGTACAGTCAAGCAAGGATCAACATAGATTTTCTTGTGTGTGTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR TCA 72 bp | CTCCTGTCCAATCACAAGCCTCCCACTGCCCTAATGTaGTTGAAAAGGGAAAATCCTGCAACACTGTACTTT | + |
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Preference number: 3 (lower is better) Translates to: LLSNHKPPTALM*LKRENPATLYF Trigger: AAAGTACAGTGTTGCAGGATTTTCCCTTTTCAATCACATTAGGGCAGTGGGAGGCTTGTGATTGGACAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR CCA 72 bp | TATACACAATACTGGTCCAAGCCTTACTCCATATACTaGATCCCTATCCTGCAGAAATCCAGCCTCTACCTT | + |
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Preference number: 3 (lower is better) Translates to: YTQYWSKPYSIY*IPILQKSSLYL Trigger: AAGGTAGAGGCTGGATTTCTGCAGGATAGGGATCCAGTATATGGAGTAAGGCTTGGACCAGTATTGTGTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR TCA 72 bp | TCACTGAACAATGGACACACACAAGAAAATCTATGTTaGTCCTTGCTTGACTGTACATGTCCACTGCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: SLNNGHTQENLC*SLLDCTCPLPP Trigger: AGGAGGCAGTGGACATGTACAGTCAAGCAAGGATCAACATAGATTTTCTTGTGTGTGTCCATTGTTCAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR CCA 72 bp | GGAAGTAACTTTCACTATGCTACAACCCTAGCCCTATaGGTCTTCTTAAAAAGTACCTTGTTCTCTGCACTG | + |
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Preference number: 3 (lower is better) Translates to: GSNFHYATTLAL*VFLKSTLFSAL Trigger: CAGTGCAGAGAACAAGGTACTTTTTAAGAAGACCCATAGGGCTAGGGTTGTAGCATAGTGAAAGTTACTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
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| 3UTR-3UTR CAA 90 bp | TTGACCCACTCAGAAACAACTTCTGGAAGGATAGTCATTTCTAAACTTTTAAACCTGCAATGCCAACACTaGAGAGATGGAGTCAGGTGC | + |
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Preference number: 3 (lower is better) Translates to: LTHSETTSGRIVISKLLNLQCQH*RDGVRC Trigger: GCACCTGACTCCATCTCTCAAGTGTTGGCATTGCAG...GTTTAAAAGTTTAGAAATGACTATCCTTCCAGAAGTTGTTTCTGAGTGGGTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR-3UTR CAA 90 bp | ATTCATGTAACAACTAAAATTATGATGCCCAGAGAAGAACATTCCCACTGCATACTGCAATGCCAACATTaGAGAGATGGAGTCAGGTGC | + |
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Preference number: 3 (lower is better) Translates to: IHVTTKIMMPREEHSHCILQCQH*RDGVRC Trigger: GCACCTGACTCCATCTCTCAAATGTTGGCATTGCAG...TATGCAGTGGGAATGTTCTTCTCTGGGCATCATAATTTTAGTTGTTACATGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR GCA 72 bp | ACTAAAATTATGATGCCCAGAGAAGAACATTCCCACTaGATATCATTGACCCACTCAGAAACAACTTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: TKIMMPREEHSH*ISLTHSETTSG Trigger: TCCAGAAGTTGTTTCTGAGTGGGTCAATGATATGCAGTGGGAATGTTCTTCTCTGGGCATCATAATTTTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR-3UTR CAA 90 bp | ATTCATGTAACAACTAAAATTATGATGCCCAGAGAAGAACATTCCCACTGCATAAAGAATAGGAGTCTATaGACCACTCTCTCATTATCT | + |
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Preference number: 3 (lower is better) Translates to: IHVTTKIMMPREEHSHCIKNRSL*TTLSLS Trigger: AGATAATGAGAGAGTGGTCAATAGACTCCTATTCTT...TATGCAGTGGGAATGTTCTTCTCTGGGCATCATAATTTTAGTTGTTACATGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| 3UTR CCA 72 bp | AGTCTATTGACCACTCTCTCATTATCTATGCCCATATaGATGAAGTTGTATATCTCAATTTATAAGCAAAGC | + |
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Preference number: 3 (lower is better) Translates to: SLLTTLSLSMPI*MKLYISIYKQS Trigger: GCTTTGCTTATAAATTGAGATATACAACTTCATCCATATGGGCATAGATAATGAGAGAGTGGTCAATAGACT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| CDS-3UTR TCA 90 bp | ACTCCTAGCTTCACTTCCCTTCTCCTGTCCAATCACAAGCCTCCCACTGCCCTATATAGGAAGCCCCAGTaGCAGAGAGTGGCCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: TPSFTSLLLSNHKPPTALYRKPQ*QRVAPA Trigger: TGCTGGGGCCACTCTCTGTCACTGGGGCTTCCTATA...TAGGGCAGTGGGAGGCTTGTGATTGGACAGGAGAAGGGAAGTGAAGCTAGGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| CDS-3UTR TCA 90 bp | ATGCCAACACTTGAGAGATGGAGTCAGGTGCCCCAGGAGTTCAGAAGCTTCTTTTATAGGAAGCCCCAGTaGCAGAGAGTGGCCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: MPTLERWSQVPQEFRSFFYRKPQ*QRVAPA Trigger: TGCTGGGGCCACTCTCTGTCACTGGGGCTTCCTATA...AAAGAAGCTTCTGAACTCCTGGGGCACCTGACTCCATCTCTCAAGTGTTGGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR TCA 90 bp | CTCAATGGACTTCATCCTTGTTTAACCATATCCCAGGACATGCCCCAGTCTCACTATAGGAAGCCCCAGTaGCAGAGAGTGGCCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LNGLHPCLTISQDMPQSHYRKPQ*QRVAPA Trigger: TGCTGGGGCCACTCTCTGTCACTGGGGCTTCCTATA...GTGAGACTGGGGCATGTCCTGGGATATGGTTAAACAAGGATGAAGTCCATTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
||
| CDS-3UTR TCA 90 bp | TCACAGGTGGTAGGAAGTAACTTTCACTATGCTACAACCCTAGCCCTATGGGTCTATAGGAAGCCCCAGTaGCAGAGAGTGGCCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SQVVGSNFHYATTLALWVYRKPQ*QRVAPA Trigger: TGCTGGGGCCACTCTCTGTCACTGGGGCTTCCTATA...GACCCATAGGGCTAGGGTTGTAGCATAGTGAAAGTTACTTCCTACCACCTGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
||
| CDS-3UTR GCA 90 bp | ACTCCTAGCTTCACTTCCCTTCTCCTGTCCAATCACAAGCCTCCCACTGCCCTAGAGCTGTGTCATGCATaGCTCAAAGGAGATCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TPSFTSLLLSNHKPPTALELCHA*LKGDQL Trigger: CAGCTGATCTCCTTTGAGGCATGCATGACACAGCTC...TAGGGCAGTGGGAGGCTTGTGATTGGACAGGAGAAGGGAAGTGAAGCTAGGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR CCA 90 bp | GTCCAAGCCTTACTCCATATACTGGATCCCTATCCTGCAGAAATCCAGCCTCTATTGGTATTGGCGTCCTaGCCTTGGGCCAGGTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VQALLHILDPYPAEIQPLLVLAS*PWARCR Trigger: TCTGCACCTGGCCCAAGGCCAGGACGCCAATACCAA...TAGAGGCTGGATTTCTGCAGGATAGGGATCCAGTATATGGAGTAAGGCTTGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR TCA 90 bp | ACTCCTAGCTTCACTTCCCTTCTCCTGTCCAATCACAAGCCTCCCACTGCCCTAGGACATGTCAGTGCATaGCAAGTTGAGCAATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TPSFTSLLLSNHKPPTALGHVSA*QVEQWR Trigger: TCTCCATTGCTCAACTTGTCATGCACTGACATGTCC...TAGGGCAGTGGGAGGCTTGTGATTGGACAGGAGAAGGGAAGTGAAGCTAGGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR CCA 90 bp | CAAACTCAATGGACTTCATCCTTGTTTAACCATATCCCAGGACATGCCCCAGTCTTGGTATTGGCGTCCTaGCCTTGGGCCAGGTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QTQWTSSLFNHIPGHAPVLVLAS*PWARCR Trigger: TCTGCACCTGGCCCAAGGCCAGGACGCCAATACCAA...GACTGGGGCATGTCCTGGGATATGGTTAAACAAGGATGAAGTCCATTGAGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
||
| CDS-3UTR CCA 90 bp | AAAAGTACCTTGTTCTCTGCACTGAATAGGACTGTCCACTCAGGTTTGTCCAGGTTGGTATTGGCGTCCTaGCCTTGGGCCAGGTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KSTLFSALNRTVHSGLSRLVLAS*PWARCR Trigger: TCTGCACCTGGCCCAAGGCCAGGACGCCAATACCAA...CCTGGACAAACCTGAGTGGACAGTCCTATTCAGTGCAGAGAACAAGGTACTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
||
| CDS-3UTR CCA 90 bp | ATGCCAACACTTGAGAGATGGAGTCAGGTGCCCCAGGAGTTCAGAAGCTTCTTTTGGATTTCTTGGTATTaGCGTCCTGGCCTTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: MPTLERWSQVPQEFRSFFWISWY*RPGLGP Trigger: TGGCCCAAGGCCAGGACGCCAATACCAAGAAATCCA...AAAGAAGCTTCTGAACTCCTGGGGCACCTGACTCCATCTCTCAAGTGTTGGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR TCA 90 bp | ATGCCAACACTTGAGAGATGGAGTCAGGTGCCCCAGGAGTTCAGAAGCTTCTTTGAGATCAGCTGTCCATaGTTCTCCTCGGAACCAATG | + |
|
Preference number: 4 (lower is better) Translates to: MPTLERWSQVPQEFRSFFEISCP*FSSEPM Trigger: CATTGGTTCCGAGGAGAATCATGGACAGCTGATCTC...AAAGAAGCTTCTGAACTCCTGGGGCACCTGACTCCATCTCTCAAGTGTTGGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR GCA 90 bp | ACTCCTAGCTTCACTTCCCTTCTCCTGTCCAATCACAAGCCTCCCACTGCCCTAAGTAGAGCTGTGTCATaGATGCCTCAAAGGAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: TPSFTSLLLSNHKPPTALSRAVS*MPQRRS Trigger: TGATCTCCTTTGAGGCATGCATGACACAGCTCTACT...TAGGGCAGTGGGAGGCTTGTGATTGGACAGGAGAAGGGAAGTGAAGCTAGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR GCA 90 bp | ACTCCTAGCTTCACTTCCCTTCTCCTGTCCAATCACAAGCCTCCCACTGCCCTAAAAGTCTGTAAGCTCTaGTGTGGACATGTCAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TPSFTSLLLSNHKPPTALKVCKL*CGHVSA Trigger: TGCACTGACATGTCCACAGCAGAGCTTACAGACTTT...TAGGGCAGTGGGAGGCTTGTGATTGGACAGGAGAAGGGAAGTGAAGCTAGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR CCA 90 bp | ATGCCAACACTTGAGAGATGGAGTCAGGTGCCCCAGGAGTTCAGAAGCTTCTTTAAATACATGGGTTTGTaGAGGGTGGGGTGGTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: MPTLERWSQVPQEFRSFFKYMGL*RVGWFL Trigger: TAGGAACCACCCCACCCTCCACAAACCCATGTATTT...AAAGAAGCTTCTGAACTCCTGGGGCACCTGACTCCATCTCTCAAGTGTTGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR CCA 90 bp | ATGCCAACACTTGAGAGATGGAGTCAGGTGCCCCAGGAGTTCAGAAGCTTCTTTCCCAGTGACAGAGAGTaGCCCCAGCAGAATAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: MPTLERWSQVPQEFRSFFPSDRE*PQQNKN Trigger: ATTTTTATTCTGCTGGGGCCACTCTCTGTCACTGGG...AAAGAAGCTTCTGAACTCCTGGGGCACCTGACTCCATCTCTCAAGTGTTGGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR CCA 90 bp | CAAACTCAATGGACTTCATCCTTGTTTAACCATATCCCAGGACATGCCCCAGTCTGGATTTCTTGGTATTaGCGTCCTGGCCTTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QTQWTSSLFNHIPGHAPVWISWY*RPGLGP Trigger: TGGCCCAAGGCCAGGACGCCAATACCAAGAAATCCA...GACTGGGGCATGTCCTGGGATATGGTTAAACAAGGATGAAGTCCATTGAGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
||
| CDS-3UTR CCA 90 bp | AGCCTTACTCCATATACTGGATCCCTATCCTGCAGAAATCCAGCCTCTACCTTATGGATTTCTTGGTATTaGCGTCCTGGCCTTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLTPYTGSLSCRNPASTLWISWY*RPGLGP Trigger: TGGCCCAAGGCCAGGACGCCAATACCAAGAAATCCA...TAAGGTAGAGGCTGGATTTCTGCAGGATAGGGATCCAGTATATGGAGTAAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR TCA 90 bp | GCTACAACCCTAGCCCTATGGGTCTTCTTAAAAAGTACCTTGTTCTCTGCACTGGAGATCAGCTGTCCATaGTTCTCCTCGGAACCAATG | + |
|
Preference number: 4 (lower is better) Translates to: ATTLALWVFLKSTLFSALEISCP*FSSEPM Trigger: CATTGGTTCCGAGGAGAATCATGGACAGCTGATCTC...CAGTGCAGAGAACAAGGTACTTTTTAAGAAGACCCATAGGGCTAGGGTTGTAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
||
| CDS-3UTR TCA 90 bp | AGCCTTACTCCATATACTGGATCCCTATCCTGCAGAAATCCAGCCTCTACCTTAGAGATCAGCTGTCCATaGTTCTCCTCGGAACCAATG | + |
|
Preference number: 4 (lower is better) Translates to: SLTPYTGSLSCRNPASTLEISCP*FSSEPM Trigger: CATTGGTTCCGAGGAGAATCATGGACAGCTGATCTC...TAAGGTAGAGGCTGGATTTCTGCAGGATAGGGATCCAGTATATGGAGTAAGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR TCA 90 bp | ATGCCAACACTTGAGAGATGGAGTCAGGTGCCCCAGGAGTTCAGAAGCTTCTTTCAGTGCATGACAAGTTaGGCAATGGAGAAACATCAC | + |
|
Preference number: 4 (lower is better) Translates to: MPTLERWSQVPQEFRSFFQCMTS*AMEKHH Trigger: GTGATGTTTCTCCATTGCTCAACTTGTCATGCACTG...AAAGAAGCTTCTGAACTCCTGGGGCACCTGACTCCATCTCTCAAGTGTTGGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR GCA 90 bp | CAAACTCAATGGACTTCATCCTTGTTTAACCATATCCCAGGACATGCCCCAGTCGAGCTGTGTCATGCATaGCTCAAAGGAGATCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QTQWTSSLFNHIPGHAPVELCHA*LKGDQL Trigger: CAGCTGATCTCCTTTGAGGCATGCATGACACAGCTC...GACTGGGGCATGTCCTGGGATATGGTTAAACAAGGATGAAGTCCATTGAGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
||
| CDS-3UTR GCA 90 bp | AGCCTTACTCCATATACTGGATCCCTATCCTGCAGAAATCCAGCCTCTACCTTAGAGCTGTGTCATGCATaGCTCAAAGGAGATCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLTPYTGSLSCRNPASTLELCHA*LKGDQL Trigger: CAGCTGATCTCCTTTGAGGCATGCATGACACAGCTC...TAAGGTAGAGGCTGGATTTCTGCAGGATAGGGATCCAGTATATGGAGTAAGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR CCA 90 bp | GTCCAAGCCTTACTCCATATACTGGATCCCTATCCTGCAGAAATCCAGCCTCTATTGTGGAGGGTGGGGTaGTTCCTAATTGCTGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: VQALLHILDPYPAEIQPLLWRVG*FLIAVM Trigger: CATTACAGCAATTAGGAACCACCCCACCCTCCACAA...TAGAGGCTGGATTTCTGCAGGATAGGGATCCAGTATATGGAGTAAGGCTTGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR CCA 90 bp | GTCCAAGCCTTACTCCATATACTGGATCCCTATCCTGCAGAAATCCAGCCTCTACCCAGTGACAGAGAGTaGCCCCAGCAGAATAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VQALLHILDPYPAEIQPLPSDRE*PQQNKN Trigger: ATTTTTATTCTGCTGGGGCCACTCTCTGTCACTGGG...TAGAGGCTGGATTTCTGCAGGATAGGGATCCAGTATATGGAGTAAGGCTTGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR CCA 90 bp | CTCAATGGACTTCATCCTTGTTTAACCATATCCCAGGACATGCCCCAGTCTCACCAGAGACCAGCTTGTTaGTGTCAAAAGCTGAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LNGLHPCLTISQDMPQSHQRPAC*CQKLRV Trigger: CACTCTCAGCTTTTGACACCAACAAGCTGGTCTCTG...GTGAGACTGGGGCATGTCCTGGGATATGGTTAAACAAGGATGAAGTCCATTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
||
| CDS-3UTR CCA 90 bp | GTCCAAGCCTTACTCCATATACTGGATCCCTATCCTGCAGAAATCCAGCCTCTACAGAGACCAGCTTGTTaGTGTCAAAAGCTGAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VQALLHILDPYPAEIQPLQRPAC*CQKLRV Trigger: CACTCTCAGCTTTTGACACCAACAAGCTGGTCTCTG...TAGAGGCTGGATTTCTGCAGGATAGGGATCCAGTATATGGAGTAAGGCTTGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR CCA 90 bp | ATGCCAACACTTGAGAGATGGAGTCAGGTGCCCCAGGAGTTCAGAAGCTTCTTTGATGGGATTGAGCAATaGTACAATGACAGCGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: MPTLERWSQVPQEFRSFFDGIEQ*YNDSVE Trigger: CTCTACGCTGTCATTGTACCATTGCTCAATCCCATC...AAAGAAGCTTCTGAACTCCTGGGGCACCTGACTCCATCTCTCAAGTGTTGGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR TCA 90 bp | ACTCCTAGCTTCACTTCCCTTCTCCTGTCCAATCACAAGCCTCCCACTGCCCTACCAAATCTCCAGGAATaGCATATTAGCCAAGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TPSFTSLLLSNHKPPTALPNLQE*HISQEK Trigger: TTTTTCTTGGCTAATATGTCATTCCTGGAGATTTGG...TAGGGCAGTGGGAGGCTTGTGATTGGACAGGAGAAGGGAAGTGAAGCTAGGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR TCA 90 bp | GTCCAAGCCTTACTCCATATACTGGATCCCTATCCTGCAGAAATCCAGCCTCTACAGTGCATGACAAGTTaGGCAATGGAGAAACATCAC | + |
|
Preference number: 4 (lower is better) Translates to: VQALLHILDPYPAEIQPLQCMTS*AMEKHH Trigger: GTGATGTTTCTCCATTGCTCAACTTGTCATGCACTG...TAGAGGCTGGATTTCTGCAGGATAGGGATCCAGTATATGGAGTAAGGCTTGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR TCA 90 bp | GCTACAACCCTAGCCCTATGGGTCTTCTTAAAAAGTACCTTGTTCTCTGCACTGGGACATGTCAGTGCATaGCAAGTTGAGCAATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ATTLALWVFLKSTLFSALGHVSA*QVEQWR Trigger: TCTCCATTGCTCAACTTGTCATGCACTGACATGTCC...CAGTGCAGAGAACAAGGTACTTTTTAAGAAGACCCATAGGGCTAGGGTTGTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
||
| CDS-3UTR GCA 90 bp | TCACAGGTGGTAGGAAGTAACTTTCACTATGCTACAACCCTAGCCCTATGGGTCAGTAGAGCTGTGTCATaGATGCCTCAAAGGAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: SQVVGSNFHYATTLALWVSRAVS*MPQRRS Trigger: TGATCTCCTTTGAGGCATGCATGACACAGCTCTACT...GACCCATAGGGCTAGGGTTGTAGCATAGTGAAAGTTACTTCCTACCACCTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
||
| CDS-3UTR GCA 90 bp | GTCCAAGCCTTACTCCATATACTGGATCCCTATCCTGCAGAAATCCAGCCTCTAAAAGTCTGTAAGCTCTaGTGTGGACATGTCAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VQALLHILDPYPAEIQPLKVCKL*CGHVSA Trigger: TGCACTGACATGTCCACAGCAGAGCTTACAGACTTT...TAGAGGCTGGATTTCTGCAGGATAGGGATCCAGTATATGGAGTAAGGCTTGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR CCA 90 bp | AAAAGTACCTTGTTCTCTGCACTGAATAGGACTGTCCACTCAGGTTTGTCCAGGTTGTGGAGGGTGGGGTaGTTCCTAATTGCTGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: KSTLFSALNRTVHSGLSRLWRVG*FLIAVM Trigger: CATTACAGCAATTAGGAACCACCCCACCCTCCACAA...CCTGGACAAACCTGAGTGGACAGTCCTATTCAGTGCAGAGAACAAGGTACTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
||
| CDS-3UTR CCA 90 bp | CAAACTCAATGGACTTCATCCTTGTTTAACCATATCCCAGGACATGCCCCAGTCAAATACATGGGTTTGTaGAGGGTGGGGTGGTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: QTQWTSSLFNHIPGHAPVKYMGL*RVGWFL Trigger: TAGGAACCACCCCACCCTCCACAAACCCATGTATTT...GACTGGGGCATGTCCTGGGATATGGTTAAACAAGGATGAAGTCCATTGAGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
||
| CDS-3UTR CCA 90 bp | GCTACAACCCTAGCCCTATGGGTCTTCTTAAAAAGTACCTTGTTCTCTGCACTGAAATACATGGGTTTGTaGAGGGTGGGGTGGTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: ATTLALWVFLKSTLFSALKYMGL*RVGWFL Trigger: TAGGAACCACCCCACCCTCCACAAACCCATGTATTT...CAGTGCAGAGAACAAGGTACTTTTTAAGAAGACCCATAGGGCTAGGGTTGTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
||
| CDS-3UTR CCA 90 bp | AGCCTTACTCCATATACTGGATCCCTATCCTGCAGAAATCCAGCCTCTACCTTAAAATACATGGGTTTGTaGAGGGTGGGGTGGTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: SLTPYTGSLSCRNPASTLKYMGL*RVGWFL Trigger: TAGGAACCACCCCACCCTCCACAAACCCATGTATTT...TAAGGTAGAGGCTGGATTTCTGCAGGATAGGGATCCAGTATATGGAGTAAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR CCA 90 bp | AGCCTTACTCCATATACTGGATCCCTATCCTGCAGAAATCCAGCCTCTACCTTACCCAGTGACAGAGAGTaGCCCCAGCAGAATAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SLTPYTGSLSCRNPASTLPSDRE*PQQNKN Trigger: ATTTTTATTCTGCTGGGGCCACTCTCTGTCACTGGG...TAAGGTAGAGGCTGGATTTCTGCAGGATAGGGATCCAGTATATGGAGTAAGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR CCA 90 bp | GCTACAACCCTAGCCCTATGGGTCTTCTTAAAAAGTACCTTGTTCTCTGCACTGCAGAGACCAGCTTGTTaGTGTCAAAAGCTGAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ATTLALWVFLKSTLFSALQRPAC*CQKLRV Trigger: CACTCTCAGCTTTTGACACCAACAAGCTGGTCTCTG...CAGTGCAGAGAACAAGGTACTTTTTAAGAAGACCCATAGGGCTAGGGTTGTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
||
| CDS-3UTR CCA 90 bp | TATGCTACAACCCTAGCCCTATGGGTCTTCTTAAAAAGTACCTTGTTCTCTGCATGGATTTCTTGGTATTaGCGTCCTGGCCTTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YATTLALWVFLKSTLFSAWISWY*RPGLGP Trigger: TGGCCCAAGGCCAGGACGCCAATACCAAGAAATCCA...TGCAGAGAACAAGGTACTTTTTAAGAAGACCCATAGGGCTAGGGTTGTAGCATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
||
| CDS-3UTR TCA 90 bp | TACAACCCTAGCCCTATGGGTCTTCTTAAAAAGTACCTTGTTCTCTGCACTGAAGAGATCAGCTGTCCATaGTTCTCCTCGGAACCAATG | + |
|
Preference number: 4 (lower is better) Translates to: YNPSPMGLLKKYLVLCTEEISCP*FSSEPM Trigger: CATTGGTTCCGAGGAGAATCATGGACAGCTGATCTC...TTCAGTGCAGAGAACAAGGTACTTTTTAAGAAGACCCATAGGGCTAGGGTTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
||
| CDS-3UTR TCA 90 bp | GCTACAACCCTAGCCCTATGGGTCTTCTTAAAAAGTACCTTGTTCTCTGCACTGCAGTGCATGACAAGTTaGGCAATGGAGAAACATCAC | + |
|
Preference number: 4 (lower is better) Translates to: ATTLALWVFLKSTLFSALQCMTS*AMEKHH Trigger: GTGATGTTTCTCCATTGCTCAACTTGTCATGCACTG...CAGTGCAGAGAACAAGGTACTTTTTAAGAAGACCCATAGGGCTAGGGTTGTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
||
| CDS-3UTR TCA 90 bp | AATACTGGTCCAAGCCTTACTCCATATACTGGATCCCTATCCTGCAGAAATCCAGGACATGTCAGTGCATaGCAAGTTGAGCAATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NTGPSLTPYTGSLSCRNPGHVSA*QVEQWR Trigger: TCTCCATTGCTCAACTTGTCATGCACTGACATGTCC...TGGATTTCTGCAGGATAGGGATCCAGTATATGGAGTAAGGCTTGGACCAGTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR GCA 90 bp | ATGCCAACACTTGAGAGATGGAGTCAGGTGCCCCAGGAGTTCAGAAGCTTCTTTGGGGTGGTTCCTAATTaGTGTAATGATGAGTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: MPTLERWSQVPQEFRSFFGVVPN*CNDEYV Trigger: AACATACTCATCATTACAGCAATTAGGAACCACCCC...AAAGAAGCTTCTGAACTCCTGGGGCACCTGACTCCATCTCTCAAGTGTTGGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR GCA 90 bp | GCTACAACCCTAGCCCTATGGGTCTTCTTAAAAAGTACCTTGTTCTCTGCACTGAGTAGAGCTGTGTCATaGATGCCTCAAAGGAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: ATTLALWVFLKSTLFSALSRAVS*MPQRRS Trigger: TGATCTCCTTTGAGGCATGCATGACACAGCTCTACT...CAGTGCAGAGAACAAGGTACTTTTTAAGAAGACCCATAGGGCTAGGGTTGTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
||
| CDS-3UTR GCA 90 bp | AGCCTTACTCCATATACTGGATCCCTATCCTGCAGAAATCCAGCCTCTACCTTAAAAGTCTGTAAGCTCTaGTGTGGACATGTCAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLTPYTGSLSCRNPASTLKVCKL*CGHVSA Trigger: TGCACTGACATGTCCACAGCAGAGCTTACAGACTTT...TAAGGTAGAGGCTGGATTTCTGCAGGATAGGGATCCAGTATATGGAGTAAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR CCA 90 bp | AATACTGGTCCAAGCCTTACTCCATATACTGGATCCCTATCCTGCAGAAATCCATTGTGGAGGGTGGGGTaGTTCCTAATTGCTGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: NTGPSLTPYTGSLSCRNPLWRVG*FLIAVM Trigger: CATTACAGCAATTAGGAACCACCCCACCCTCCACAA...TGGATTTCTGCAGGATAGGGATCCAGTATATGGAGTAAGGCTTGGACCAGTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR CCA 90 bp | AATACTGGTCCAAGCCTTACTCCATATACTGGATCCCTATCCTGCAGAAATCCACAGAGACCAGCTTGTTaGTGTCAAAAGCTGAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NTGPSLTPYTGSLSCRNPQRPAC*CQKLRV Trigger: CACTCTCAGCTTTTGACACCAACAAGCTGGTCTCTG...TGGATTTCTGCAGGATAGGGATCCAGTATATGGAGTAAGGCTTGGACCAGTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR CCA 90 bp | AAAAGTACCTTGTTCTCTGCACTGAATAGGACTGTCCACTCAGGTTTGTCCAGGGATGGGATTGAGCAATaGTACAATGACAGCGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KSTLFSALNRTVHSGLSRDGIEQ*YNDSVE Trigger: CTCTACGCTGTCATTGTACCATTGCTCAATCCCATC...CCTGGACAAACCTGAGTGGACAGTCCTATTCAGTGCAGAGAACAAGGTACTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
||
| CDS-3UTR CCA 90 bp | GCTACAACCCTAGCCCTATGGGTCTTCTTAAAAAGTACCTTGTTCTCTGCACTGGATGGGATTGAGCAATaGTACAATGACAGCGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ATTLALWVFLKSTLFSALDGIEQ*YNDSVE Trigger: CTCTACGCTGTCATTGTACCATTGCTCAATCCCATC...CAGTGCAGAGAACAAGGTACTTTTTAAGAAGACCCATAGGGCTAGGGTTGTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
||
| CDS-3UTR TCA 90 bp | CTATGCTACAACCCTAGCCCTATGGGTCTTCTTAAAAAGTACCTTGTTCTCTGCCAGTGCATGACAAGTTaGGCAATGGAGAAACATCAC | + |
|
Preference number: 4 (lower is better) Translates to: LCYNPSPMGLLKKYLVLCQCMTS*AMEKHH Trigger: GTGATGTTTCTCCATTGCTCAACTTGTCATGCACTG...GCAGAGAACAAGGTACTTTTTAAGAAGACCCATAGGGCTAGGGTTGTAGCATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
||
| CDS-3UTR GCA 90 bp | CTCAATGGACTTCATCCTTGTTTAACCATATCCCAGGACATGCCCCAGTCTCACGGGGTGGTTCCTAATTaGTGTAATGATGAGTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: LNGLHPCLTISQDMPQSHGVVPN*CNDEYV Trigger: AACATACTCATCATTACAGCAATTAGGAACCACCCC...GTGAGACTGGGGCATGTCCTGGGATATGGTTAAACAAGGATGAAGTCCATTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
||
| CDS-3UTR CCA 90 bp | AATACTGGTCCAAGCCTTACTCCATATACTGGATCCCTATCCTGCAGAAATCCAGATGGGATTGAGCAATaGTACAATGACAGCGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NTGPSLTPYTGSLSCRNPDGIEQ*YNDSVE Trigger: CTCTACGCTGTCATTGTACCATTGCTCAATCCCATC...TGGATTTCTGCAGGATAGGGATCCAGTATATGGAGTAAGGCTTGGACCAGTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR CCA 90 bp | TTGACCCACTCAGAAACAACTTCTGGAAGGATAGTCATTTCTAAACTTTTAAACTTGGTATTGGCGTCCTaGCCTTGGGCCAGGTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LTHSETTSGRIVISKLLNLVLAS*PWARCR Trigger: TCTGCACCTGGCCCAAGGCCAGGACGCCAATACCAA...GTTTAAAAGTTTAGAAATGACTATCCTTCCAGAAGTTGTTTCTGAGTGGGTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| 3UTR CAA 72 bp | ATGATGCCCAGAGAAGAACATTCCCACTGCATATCATaGACCCACTCAGAAACAACTTCTGGAAGGATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: MMPREEHSHCIS*THSETTSGRIV Trigger: GACTATCCTTCCAGAAGTTGTTTCTGAGTGGGTCAATGATATGCAGTGGGAATGTTCTTCTCTGGGCATCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| 3UTR CAA 72 bp | ATGGACACACACAAGAAAATCTATGTTGATCCTTGCTaGACTGTACATGTCCACTGCCTCCTGTCATTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MDTHKKIYVDPC*TVHVHCLLSFW Trigger: CCAGAATGACAGGAGGCAGTGGACATGTACAGTCAAGCAAGGATCAACATAGATTTTCTTGTGTGTGTCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR TCA 90 bp | TCACAGGTGGTAGGAAGTAACTTTCACTATGCTACAACCCTAGCCCTATGGGTCCCAAATCTCCAGGAATaGCATATTAGCCAAGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SQVVGSNFHYATTLALWVPNLQE*HISQEK Trigger: TTTTTCTTGGCTAATATGTCATTCCTGGAGATTTGG...GACCCATAGGGCTAGGGTTGTAGCATAGTGAAAGTTACTTCCTACCACCTGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
||
| CDS-3UTR TCA 90 bp | GTAGGAAGTAACTTTCACTATGCTACAACCCTAGCCCTATGGGTCTTCTTAAAAGGACATGTCAGTGCATaGCAAGTTGAGCAATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VGSNFHYATTLALWVFLKGHVSA*QVEQWR Trigger: TCTCCATTGCTCAACTTGTCATGCACTGACATGTCC...TTTTAAGAAGACCCATAGGGCTAGGGTTGTAGCATAGTGAAAGTTACTTCCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
||
| CDS-3UTR GCA 90 bp | GCTACAACCCTAGCCCTATGGGTCTTCTTAAAAAGTACCTTGTTCTCTGCACTGGGGGTGGTTCCTAATTaGTGTAATGATGAGTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: ATTLALWVFLKSTLFSALGVVPN*CNDEYV Trigger: AACATACTCATCATTACAGCAATTAGGAACCACCCC...CAGTGCAGAGAACAAGGTACTTTTTAAGAAGACCCATAGGGCTAGGGTTGTAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
||
| CDS-3UTR GCA 90 bp | AGCCTTACTCCATATACTGGATCCCTATCCTGCAGAAATCCAGCCTCTACCTTAGGGGTGGTTCCTAATTaGTGTAATGATGAGTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLTPYTGSLSCRNPASTLGVVPN*CNDEYV Trigger: AACATACTCATCATTACAGCAATTAGGAACCACCCC...TAAGGTAGAGGCTGGATTTCTGCAGGATAGGGATCCAGTATATGGAGTAAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR GCA 90 bp | TATGCTACAACCCTAGCCCTATGGGTCTTCTTAAAAAGTACCTTGTTCTCTGCAAAAGTCTGTAAGCTCTaGTGTGGACATGTCAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: YATTLALWVFLKSTLFSAKVCKL*CGHVSA Trigger: TGCACTGACATGTCCACAGCAGAGCTTACAGACTTT...TGCAGAGAACAAGGTACTTTTTAAGAAGACCCATAGGGCTAGGGTTGTAGCATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
||
| CDS-3UTR GCA 90 bp | TACAACCCTAGCCCTATGGGTCTTCTTAAAAAGTACCTTGTTCTCTGCACTGAAAAAGTCTGTAAGCTCTaGTGTGGACATGTCAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: YNPSPMGLLKKYLVLCTEKVCKL*CGHVSA Trigger: TGCACTGACATGTCCACAGCAGAGCTTACAGACTTT...TTCAGTGCAGAGAACAAGGTACTTTTTAAGAAGACCCATAGGGCTAGGGTTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
||
| CDS-3UTR GCA 90 bp | ATGCCAACACTTGAGAGATGGAGTCAGGTGCCCCAGGAGTTCAGAAGCTTCTTTGATGAAAATACTGGCTaGATAGAAGATAATCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: MPTLERWSQVPQEFRSFFDENTG*IEDNHN Trigger: GTTGTGATTATCTTCTATGCAGCCAGTATTTTCATC...AAAGAAGCTTCTGAACTCCTGGGGCACCTGACTCCATCTCTCAAGTGTTGGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR CCA 90 bp | GTAGGAAGTAACTTTCACTATGCTACAACCCTAGCCCTATGGGTCTTCTTAAAATTGTGGAGGGTGGGGTaGTTCCTAATTGCTGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: VGSNFHYATTLALWVFLKLWRVG*FLIAVM Trigger: CATTACAGCAATTAGGAACCACCCCACCCTCCACAA...TTTTAAGAAGACCCATAGGGCTAGGGTTGTAGCATAGTGAAAGTTACTTCCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
||
| CDS-3UTR CCA 90 bp | GTAGGAAGTAACTTTCACTATGCTACAACCCTAGCCCTATGGGTCTTCTTAAAACCCAGTGACAGAGAGTaGCCCCAGCAGAATAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VGSNFHYATTLALWVFLKPSDRE*PQQNKN Trigger: ATTTTTATTCTGCTGGGGCCACTCTCTGTCACTGGG...TTTTAAGAAGACCCATAGGGCTAGGGTTGTAGCATAGTGAAAGTTACTTCCTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
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| CDS-3UTR CCA 90 bp | ATTCATGTAACAACTAAAATTATGATGCCCAGAGAAGAACATTCCCACTGCATATGGATTTCTTGGTATTaGCGTCCTGGCCTTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IHVTTKIMMPREEHSHCIWISWY*RPGLGP Trigger: TGGCCCAAGGCCAGGACGCCAATACCAAGAAATCCA...TATGCAGTGGGAATGTTCTTCTCTGGGCATCATAATTTTAGTTGTTACATGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR TCA 90 bp | AATACTGGTCCAAGCCTTACTCCATATACTGGATCCCTATCCTGCAGAAATCCACCAAATCTCCAGGAATaGCATATTAGCCAAGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: NTGPSLTPYTGSLSCRNPPNLQE*HISQEK Trigger: TTTTTCTTGGCTAATATGTCATTCCTGGAGATTTGG...TGGATTTCTGCAGGATAGGGATCCAGTATATGGAGTAAGGCTTGGACCAGTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR TCA 90 bp | ATTCATGTAACAACTAAAATTATGATGCCCAGAGAAGAACATTCCCACTGCATAGAGATCAGCTGTCCATaGTTCTCCTCGGAACCAATG | + |
|
Preference number: 4 (lower is better) Translates to: IHVTTKIMMPREEHSHCIEISCP*FSSEPM Trigger: CATTGGTTCCGAGGAGAATCATGGACAGCTGATCTC...TATGCAGTGGGAATGTTCTTCTCTGGGCATCATAATTTTAGTTGTTACATGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR GCA 90 bp | ATTCATGTAACAACTAAAATTATGATGCCCAGAGAAGAACATTCCCACTGCATAGAGCTGTGTCATGCATaGCTCAAAGGAGATCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IHVTTKIMMPREEHSHCIELCHA*LKGDQL Trigger: CAGCTGATCTCCTTTGAGGCATGCATGACACAGCTC...TATGCAGTGGGAATGTTCTTCTCTGGGCATCATAATTTTAGTTGTTACATGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR GCA 90 bp | CTATGCTACAACCCTAGCCCTATGGGTCTTCTTAAAAAGTACCTTGTTCTCTGCGATGAAAATACTGGCTaGATAGAAGATAATCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: LCYNPSPMGLLKKYLVLCDENTG*IEDNHN Trigger: GTTGTGATTATCTTCTATGCAGCCAGTATTTTCATC...GCAGAGAACAAGGTACTTTTTAAGAAGACCCATAGGGCTAGGGTTGTAGCATAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
||
| CDS-3UTR GCA 90 bp | AATACTGGTCCAAGCCTTACTCCATATACTGGATCCCTATCCTGCAGAAATCCAGATGAAAATACTGGCTaGATAGAAGATAATCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: NTGPSLTPYTGSLSCRNPDENTG*IEDNHN Trigger: GTTGTGATTATCTTCTATGCAGCCAGTATTTTCATC...TGGATTTCTGCAGGATAGGGATCCAGTATATGGAGTAAGGCTTGGACCAGTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR CCA 90 bp | TTGACCCACTCAGAAACAACTTCTGGAAGGATAGTCATTTCTAAACTTTTAAACTTGTGGAGGGTGGGGTaGTTCCTAATTGCTGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: LTHSETTSGRIVISKLLNLWRVG*FLIAVM Trigger: CATTACAGCAATTAGGAACCACCCCACCCTCCACAA...GTTTAAAAGTTTAGAAATGACTATCCTTCCAGAAGTTGTTTCTGAGTGGGTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR CCA 90 bp | ATTCATGTAACAACTAAAATTATGATGCCCAGAGAAGAACATTCCCACTGCATAAAATACATGGGTTTGTaGAGGGTGGGGTGGTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: IHVTTKIMMPREEHSHCIKYMGL*RVGWFL Trigger: TAGGAACCACCCCACCCTCCACAAACCCATGTATTT...TATGCAGTGGGAATGTTCTTCTCTGGGCATCATAATTTTAGTTGTTACATGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR CCA 90 bp | TTGACCCACTCAGAAACAACTTCTGGAAGGATAGTCATTTCTAAACTTTTAAACCAGAGACCAGCTTGTTaGTGTCAAAAGCTGAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LTHSETTSGRIVISKLLNQRPAC*CQKLRV Trigger: CACTCTCAGCTTTTGACACCAACAAGCTGGTCTCTG...GTTTAAAAGTTTAGAAATGACTATCCTTCCAGAAGTTGTTTCTGAGTGGGTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR TCA 90 bp | GTAGGAAGTAACTTTCACTATGCTACAACCCTAGCCCTATGGGTCTTCTTAAAACCAAATCTCCAGGAATaGCATATTAGCCAAGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VGSNFHYATTLALWVFLKPNLQE*HISQEK Trigger: TTTTTCTTGGCTAATATGTCATTCCTGGAGATTTGG...TTTTAAGAAGACCCATAGGGCTAGGGTTGTAGCATAGTGAAAGTTACTTCCTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
||
| CDS-3UTR TCA 90 bp | TTGACCCACTCAGAAACAACTTCTGGAAGGATAGTCATTTCTAAACTTTTAAACCAGTGCATGACAAGTTaGGCAATGGAGAAACATCAC | + |
|
Preference number: 4 (lower is better) Translates to: LTHSETTSGRIVISKLLNQCMTS*AMEKHH Trigger: GTGATGTTTCTCCATTGCTCAACTTGTCATGCACTG...GTTTAAAAGTTTAGAAATGACTATCCTTCCAGAAGTTGTTTCTGAGTGGGTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR GCA 90 bp | ATTCATGTAACAACTAAAATTATGATGCCCAGAGAAGAACATTCCCACTGCATAAGTAGAGCTGTGTCATaGATGCCTCAAAGGAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: IHVTTKIMMPREEHSHCISRAVS*MPQRRS Trigger: TGATCTCCTTTGAGGCATGCATGACACAGCTCTACT...TATGCAGTGGGAATGTTCTTCTCTGGGCATCATAATTTTAGTTGTTACATGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR GCA 90 bp | TACAACCCTAGCCCTATGGGTCTTCTTAAAAAGTACCTTGTTCTCTGCACTGAAGATGAAAATACTGGCTaGATAGAAGATAATCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: YNPSPMGLLKKYLVLCTEDENTG*IEDNHN Trigger: GTTGTGATTATCTTCTATGCAGCCAGTATTTTCATC...TTCAGTGCAGAGAACAAGGTACTTTTTAAGAAGACCCATAGGGCTAGGGTTGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
||
| CDS-3UTR GCA 90 bp | ATTCATGTAACAACTAAAATTATGATGCCCAGAGAAGAACATTCCCACTGCATAGGGGTGGTTCCTAATTaGTGTAATGATGAGTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: IHVTTKIMMPREEHSHCIGVVPN*CNDEYV Trigger: AACATACTCATCATTACAGCAATTAGGAACCACCCC...TATGCAGTGGGAATGTTCTTCTCTGGGCATCATAATTTTAGTTGTTACATGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR TCA 90 bp | TTGACCCACTCAGAAACAACTTCTGGAAGGATAGTCATTTCTAAACTTTTAAACCCAAATCTCCAGGAATaGCATATTAGCCAAGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LTHSETTSGRIVISKLLNPNLQE*HISQEK Trigger: TTTTTCTTGGCTAATATGTCATTCCTGGAGATTTGG...GTTTAAAAGTTTAGAAATGACTATCCTTCCAGAAGTTGTTTCTGAGTGGGTCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| 3UTR CAA 72 bp | AATATATTAGGGAGATTTAAAGGCAGATTAAGAAACTaGGTGTTACCCAACATCACTGAACAATGGACACAC | + |
|
Preference number: 4 (lower is better) Translates to: NILGRFKGRLRN*VLPNITEQWTH Trigger: GTGTGTCCATTGTTCAGTGATGTTGGGTAACACCAAGTTTCTTAATCTGCCTTTAAATCTCCCTAATATATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR GCA 90 bp | ATTCATGTAACAACTAAAATTATGATGCCCAGAGAAGAACATTCCCACTGCATAGATGAAAATACTGGCTaGATAGAAGATAATCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: IHVTTKIMMPREEHSHCIDENTG*IEDNHN Trigger: GTTGTGATTATCTTCTATGCAGCCAGTATTTTCATC...TATGCAGTGGGAATGTTCTTCTCTGGGCATCATAATTTTAGTTGTTACATGAAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR CAA 90 bp | AGCCTTACTCCATATACTGGATCCCTATCCTGCAGAAATCCAGCCTCTACCTTAATTGGCGTCCTGGCCTaGGGCCAGGTGCAGAGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: SLTPYTGSLSCRNPASTLIGVLA*GQVQSA Trigger: CGCACTCTGCACCTGGCCCAAGGCCAGGACGCCAAT...TAAGGTAGAGGCTGGATTTCTGCAGGATAGGGATCCAGTATATGGAGTAAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR CAA 90 bp | AAAAGTACCTTGTTCTCTGCACTGAATAGGACTGTCCACTCAGGTTTGTCCAGGATTGGCGTCCTGGCCTaGGGCCAGGTGCAGAGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: KSTLFSALNRTVHSGLSRIGVLA*GQVQSA Trigger: CGCACTCTGCACCTGGCCCAAGGCCAGGACGCCAAT...CCTGGACAAACCTGAGTGGACAGTCCTATTCAGTGCAGAGAACAAGGTACTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
||
| CDS-3UTR CAA 90 bp | GTAGGAAGTAACTTTCACTATGCTACAACCCTAGCCCTATGGGTCTTCTTAAAAATTGGCGTCCTGGCCTaGGGCCAGGTGCAGAGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: VGSNFHYATTLALWVFLKIGVLA*GQVQSA Trigger: CGCACTCTGCACCTGGCCCAAGGCCAGGACGCCAAT...TTTTAAGAAGACCCATAGGGCTAGGGTTGTAGCATAGTGAAAGTTACTTCCTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
||
| CDS-3UTR CAA 90 bp | GTCCAAGCCTTACTCCATATACTGGATCCCTATCCTGCAGAAATCCAGCCTCTAACAGAGACCAGCTTGTaGGTGTCAAAAGCTGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: VQALLHILDPYPAEIQPLTETSL*VSKAES Trigger: ACTCTCAGCTTTTGACACCAACAAGCTGGTCTCTGT...TAGAGGCTGGATTTCTGCAGGATAGGGATCCAGTATATGGAGTAAGGCTTGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
||
| CDS-3UTR CAA 90 bp | TTGACCCACTCAGAAACAACTTCTGGAAGGATAGTCATTTCTAAACTTTTAAACATTGGCGTCCTGGCCTaGGGCCAGGTGCAGAGTGCG | + |
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Preference number: 5 (lower is better) Translates to: LTHSETTSGRIVISKLLNIGVLA*GQVQSA Trigger: CGCACTCTGCACCTGGCCCAAGGCCAGGACGCCAAT...GTTTAAAAGTTTAGAAATGACTATCCTTCCAGAAGTTGTTTCTGAGTGGGTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| CDS-3UTR CAA 90 bp | GCTACAACCCTAGCCCTATGGGTCTTCTTAAAAAGTACCTTGTTCTCTGCACTGACAGAGACCAGCTTGTaGGTGTCAAAAGCTGAGAGT | + |
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Preference number: 5 (lower is better) Translates to: ATTLALWVFLKSTLFSALTETSL*VSKAES Trigger: ACTCTCAGCTTTTGACACCAACAAGCTGGTCTCTGT...CAGTGCAGAGAACAAGGTACTTTTTAAGAAGACCCATAGGGCTAGGGTTGTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
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| CDS-3UTR CAA 90 bp | AAAAGTACCTTGTTCTCTGCACTGAATAGGACTGTCCACTCAGGTTTGTCCAGGAGTACAGAGACCAGCTaGTTGGTGTCAAAAGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: KSTLFSALNRTVHSGLSRSTETS*LVSKAE Trigger: CTCAGCTTTTGACACCAACAAGCTGGTCTCTGTACT...CCTGGACAAACCTGAGTGGACAGTCCTATTCAGTGCAGAGAACAAGGTACTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207280.4 ENSMUST00000211432.3 |
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| CDS-3UTR CAA 90 bp | AATACTGGTCCAAGCCTTACTCCATATACTGGATCCCTATCCTGCAGAAATCCAACAGAGACCAGCTTGTaGGTGTCAAAAGCTGAGAGT | + |
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Preference number: 5 (lower is better) Translates to: NTGPSLTPYTGSLSCRNPTETSL*VSKAES Trigger: ACTCTCAGCTTTTGACACCAACAAGCTGGTCTCTGT...TGGATTTCTGCAGGATAGGGATCCAGTATATGGAGTAAGGCTTGGACCAGTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| CDS-3UTR CAA 90 bp | TTGACCCACTCAGAAACAACTTCTGGAAGGATAGTCATTTCTAAACTTTTAAACACAGAGACCAGCTTGTaGGTGTCAAAAGCTGAGAGT | + |
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Preference number: 5 (lower is better) Translates to: LTHSETTSGRIVISKLLNTETSL*VSKAES Trigger: ACTCTCAGCTTTTGACACCAACAAGCTGGTCTCTGT...GTTTAAAAGTTTAGAAATGACTATCCTTCCAGAAGTTGTTTCTGAGTGGGTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000208147.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| CDS GCA 72 bp | TGCAACCCAAGCCTAGGAAAAAGTAGAGCTGTGTCATaGATGCCTCAAAGGAGATCAGCTGTCCATGATTCT | + |
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Preference number: 6 (lower is better) Translates to: CNPSLGKSRAVS*MPQRRSAVHDS Trigger: AGAATCATGGACAGCTGATCTCCTTTGAGGCATGCATGACACAGCTCTACTTTTTCCTAGGCTTGGGTTGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000094109.3 ENSMUST00000207280.4 ENSMUST00000208147.3 ENSMUST00000211432.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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| CDS GCA 72 bp | ATACATGGGTTTGTGGAGGGTGGGGTGGTTCCTAATTaGTGTAATGATGAGTATGTTTTCAGTCAGCACCAA | + |
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Preference number: 6 (lower is better) Translates to: IHGFVEGGVVPN*CNDEYVFSQHQ Trigger: TTGGTGCTGACTGAAAACATACTCATCATTACAGCAATTAGGAACCACCCCACCCTCCACAAACCCATGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000094109.3 ENSMUST00000207280.4 ENSMUST00000208147.3 ENSMUST00000211432.3 ENSMUST00000214105.2 ENSMUST00000216375.2 |
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