Pregenerated sensors for OLFR198 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052537Ensembl transcript IDs: ENSMUST00000208244.3
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGATGCTCACTGCCTTCAACAGGAGCTCATGAGCTACTGGTGACCTaGAAGAAAAGATTCCAATCCATAATTCTAGAGATTTCCCATCTC | + |
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Preference number: 1 (lower is better) Translates to: RCSLPSTGAHELLVT*KKRFQSIILEISHL Trigger: GAGATGGGAAATCTCTAGAATTATGGATTGGAATCTTTTCTTCCAGGTCACCAGTAGCTCATGAGCTCCTGTTGAAGGCAGTGAGCATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208244.3 |
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| 3UTR GCA 90 bp | GCAAATGAGCATAGTATTTCTGGATGCACTGACTGTGGGTTACAGTaGCAAACATTACTAGAAAACATGACGAGATGCTCACTGCCTTCA | + |
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Preference number: 1 (lower is better) Translates to: ANEHSISGCTDCGLQ*QTLLENMTRCSLPS Trigger: TGAAGGCAGTGAGCATCTCGTCATGTTTTCTAGTAATGTTTGGCACTGTAACCCACAGTCAGTGCATCCAGAAATACTATGCTCATTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208244.3 |
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| 3UTR GCA 90 bp | GTAGAAGCCAAATGCTCAGGTGCAAATGAGCATAGTATTTCTGGATaGACTGACTGTGGGTTACAGTGCCAAACATTACTAGAAAACATG | + |
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Preference number: 1 (lower is better) Translates to: VEAKCSGANEHSISG*TDCGLQCQTLLENM Trigger: CATGTTTTCTAGTAATGTTTGGCACTGTAACCCACAGTCAGTGCATCCAGAAATACTATGCTCATTTGCACCTGAGCATTTGGCTTCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208244.3 |
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| 3UTR-3UTR TCA 90 bp | TTGGAATTTCCTAAGAGACACTTAGTCTGTAGAAGCCAAATGCTCAGGTGCAAATTCAACAGGAGCTCATaGGCTACTGGTGACCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: LEFPKRHLVCRSQMLRCKFNRSS*ATGDLE Trigger: TTCCAGGTCACCAGTAGCTCATGAGCTCCTGTTGAA...TTTGCACCTGAGCATTTGGCTTCTACAGACTAAGTGTCTCTTAGGAAATTCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208244.3 |
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| 3UTR-3UTR TCA 90 bp | TTGGAATTTCCTAAGAGACACTTAGTCTGTAGAAGCCAAATGCTCAGGTGCAAACTCATGAGCTACTGGTaGCCTGGAAGAAAAGATTCC | + |
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Preference number: 2 (lower is better) Translates to: LEFPKRHLVCRSQMLRCKLMSYW*PGRKDS Trigger: GGAATCTTTTCTTCCAGGTCACCAGTAGCTCATGAG...TTTGCACCTGAGCATTTGGCTTCTACAGACTAAGTGTCTCTTAGGAAATTCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208244.3 |
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| 3UTR-3UTR CCA 90 bp | TTGGAATTTCCTAAGAGACACTTAGTCTGTAGAAGCCAAATGCTCAGGTGCAAAGAGCTACTGGTGACCTaGAAGAAAAGATTCCAATCC | + |
|
Preference number: 2 (lower is better) Translates to: LEFPKRHLVCRSQMLRCKELLVT*KKRFQS Trigger: GGATTGGAATCTTTTCTTCCAGGTCACCAGTAGCTC...TTTGCACCTGAGCATTTGGCTTCTACAGACTAAGTGTCTCTTAGGAAATTCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208244.3 |
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| 3UTR-3UTR TCA 90 bp | TTACTCCTCATAAAATTGGAATTTCCTAAGAGACACTTAGTCTGTAGAAGCCAATATTTCTGGATGCACTaGCTGTGGGTTACAGTGCCA | + |
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Preference number: 2 (lower is better) Translates to: LLLIKLEFPKRHLVCRSQYFWMH*LWVTVP Trigger: TGGCACTGTAACCCACAGTCAGTGCATCCAGAAATA...TTGGCTTCTACAGACTAAGTGTCTCTTAGGAAATTCCAATTTTATGAGGAGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208244.3 |
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| 3UTR GCA 72 bp | TTACAGTGCCAAACATTACTAGAAAACATGACGAGATaGTCACTGCCTTCAACAGGAGCTCATGAGCTACTG | + |
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Preference number: 3 (lower is better) Translates to: LQCQTLLENMTR*SLPSTGAHELL Trigger: CAGTAGCTCATGAGCTCCTGTTGAAGGCAGTGAGCATCTCGTCATGTTTTCTAGTAATGTTTGGCACTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208244.3 |
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| 3UTR GCA 72 bp | AAATGCTCAGGTGCAAATGAGCATAGTATTTCTGGATaGACTGACTGTGGGTTACAGTGCCAAACATTACTA | + |
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Preference number: 3 (lower is better) Translates to: KCSGANEHSISG*TDCGLQCQTLL Trigger: TAGTAATGTTTGGCACTGTAACCCACAGTCAGTGCATCCAGAAATACTATGCTCATTTGCACCTGAGCATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208244.3 |
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| CDS-3UTR TCA 90 bp | TTGGAATTTCCTAAGAGACACTTAGTCTGTAGAAGCCAAATGCTCAGGTGCAAAGGGAGTCACAGAAGATaGAGCACAGGCGTCTGCAAA | + |
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Preference number: 4 (lower is better) Translates to: LEFPKRHLVCRSQMLRCKGSHRR*STGVCK Trigger: TTTGCAGACGCCTGTGCTTCATCTTCTGTGACTCCC...TTTGCACCTGAGCATTTGGCTTCTACAGACTAAGTGTCTCTTAGGAAATTCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208244.3 |
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| CDS-3UTR TCA 90 bp | TTACTCCTCATAAAATTGGAATTTCCTAAGAGACACTTAGTCTGTAGAAGCCAAGACACGGAGAGCAGGTaGGCACTGCAGGTGGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: LLLIKLEFPKRHLVCRSQDTESR*ALQVEK Trigger: CTTCTCCACCTGCAGTGCTCACCTGCTCTCCGTGTC...TTGGCTTCTACAGACTAAGTGTCTCTTAGGAAATTCCAATTTTATGAGGAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208244.3 |
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| CDS-3UTR GCA 90 bp | TTACTCCTCATAAAATTGGAATTTCCTAAGAGACACTTAGTCTGTAGAAGCCAAAGGAAGAGGGGAACCTaGAACTCGGGTCTCTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: LLLIKLEFPKRHLVCRSQRKRGT*NSGLSV Trigger: CACTGAGAGACCCGAGTTGCAGGTTCCCCTCTTCCT...TTGGCTTCTACAGACTAAGTGTCTCTTAGGAAATTCCAATTTTATGAGGAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208244.3 |
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| CDS-3UTR CCA 90 bp | TCTGGATGCACTGACTGTGGGTTACAGTGCCAAACATTACTAGAAAACATGACGACTTTGTTTTCAGGATaGCAAGAAGGACAGAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: SGCTDCGLQCQTLLENMTTLFSG*QEGQRS Trigger: ACTTCTCTGTCCTTCTTGCCATCCTGAAAACAAAGT...CGTCATGTTTTCTAGTAATGTTTGGCACTGTAACCCACAGTCAGTGCATCCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208244.3 |
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| CDS-3UTR GCA 90 bp | TCTGGATGCACTGACTGTGGGTTACAGTGCCAAACATTACTAGAAAACATGACGGAAACATTCTGTCGTTaGACTGGAACCAAAGAAATA | + |
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Preference number: 4 (lower is better) Translates to: SGCTDCGLQCQTLLENMTETFCR*TGTKEI Trigger: TATTTCTTTGGTTCCAGTGCAACGACAGAATGTTTC...CGTCATGTTTTCTAGTAATGTTTGGCACTGTAACCCACAGTCAGTGCATCCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208244.3 |
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| CDS-3UTR TCA 90 bp | TTGGAATTTCCTAAGAGACACTTAGTCTGTAGAAGCCAAATGCTCAGGTGCAAACAGTGCAGGAAATTTTaGATAACTGCAAGATTTCAC | + |
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Preference number: 4 (lower is better) Translates to: LEFPKRHLVCRSQMLRCKQCRKF*ITARFH Trigger: GTGAAATCTTGCAGTTATTCAAAATTTCCTGCACTG...TTTGCACCTGAGCATTTGGCTTCTACAGACTAAGTGTCTCTTAGGAAATTCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208244.3 |
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| CDS-3UTR TCA 90 bp | TTACTCCTCATAAAATTGGAATTTCCTAAGAGACACTTAGTCTGTAGAAGCCAAACTAACAAGCCCACATaGATTGCTGAATGTAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: LLLIKLEFPKRHLVCRSQTNKPT*IAECRK Trigger: TTTTCTACATTCAGCAATTCATGTGGGCTTGTTAGT...TTGGCTTCTACAGACTAAGTGTCTCTTAGGAAATTCCAATTTTATGAGGAGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208244.3 |
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| 3UTR CAA 72 bp | CATATGTTCCTTTTTCCCTTACCTTCTGTTCAAATATaGTTACCAGTGAAAATGACAAACACAAGGCTGACT | + |
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Preference number: 4 (lower is better) Translates to: HMFLFPLPSVQI*LPVKMTNTRLT Trigger: AGTCAGCCTTGTGTTTGTCATTTTCACTGGTAACAATATTTGAACAGAAGGTAAGGGAAAAAGGAACATATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208244.3 |
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| CDS-3UTR CAA 90 bp | TCTGGATGCACTGACTGTGGGTTACAGTGCCAAACATTACTAGAAAACATGACGCAGGTGGAGAAGGCTTaGCGTCTGCCCCTCTCAGAC | + |
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Preference number: 5 (lower is better) Translates to: SGCTDCGLQCQTLLENMTQVEKA*RLPLSD Trigger: GTCTGAGAGGGGCAGACGCAAAGCCTTCTCCACCTG...CGTCATGTTTTCTAGTAATGTTTGGCACTGTAACCCACAGTCAGTGCATCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208244.3 |
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| CDS-3UTR CAA 90 bp | TTGGAATTTCCTAAGAGACACTTAGTCTGTAGAAGCCAAATGCTCAGGTGCAAAACAAGCCCACATGAATaGCTGAATGTAGAAAACCTA | + |
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Preference number: 5 (lower is better) Translates to: LEFPKRHLVCRSQMLRCKTSPHE*LNVENL Trigger: TAGGTTTTCTACATTCAGCAATTCATGTGGGCTTGT...TTTGCACCTGAGCATTTGGCTTCTACAGACTAAGTGTCTCTTAGGAAATTCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208244.3 |
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