Pregenerated sensors for OLFR197 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000109020Ensembl transcript IDs: ENSMUST00000207772.3
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TATCACACTGAAGTCTTTTTCAGAGGGTCACTGTCCTACAGCCACTaGAATCATGTTCAAGAACATGCAAAGAAATTTGATATGCAGCTG | + |
|
Preference number: 1 (lower is better) Translates to: YHTEVFFRGSLSYSH*NHVQEHAKKFDMQL Trigger: CAGCTGCATATCAAATTTCTTTGCATGTTCTTGAACATGATTTCAGTGGCTGTAGGACAGTGACCCTCTGAAAAAGACTTCAGTGTGATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207772.3 |
||
| 3UTR TCA 72 bp | GCTAGAACAGGTGCAATTGGAAAATACTTTAGACCATaGACAAAGTACAGCCACATTAAGCCAGCACACATT | + |
|
Preference number: 3 (lower is better) Translates to: ARTGAIGKYFRP*TKYSHIKPAHI Trigger: AATGTGTGCTGGCTTAATGTGGCTGTACTTTGTTCATGGTCTAAAGTATTTTCCAATTGCACCTGTTCTAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207772.3 |
||
| 3UTR TCA 72 bp | GAAGTCTTTTTCAGAGGGTCACTGTCCTACAGCCACTaGAATCATGTTCAAGAACATGCAAAGAAATTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: EVFFRGSLSYSH*NHVQEHAKKFD Trigger: ATCAAATTTCTTTGCATGTTCTTGAACATGATTTCAGTGGCTGTAGGACAGTGACCCTCTGAAAAAGACTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207772.3 |
||
| CDS-3UTR CCA 90 bp | ATCACACTGAAGTCTTTTTCAGAGGGTCACTGTCCTACAGCCACTGAAATCATGGGGGATTTTCCATTGTaGCTGGTGACTGAGTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: ITLKSFSEGHCPTATEIMGDFPL*LVTESR Trigger: ACGGGACTCAGTCACCAGCCACAATGGAAAATCCCC...CATGATTTCAGTGGCTGTAGGACAGTGACCCTCTGAAAAAGACTTCAGTGTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000207772.3 |
||
| CDS-3UTR TCA 90 bp | GAGGGTCACTGTCCTACAGCCACTGAAATCATGTTCAAGAACATGCAAAGAAATAGGTACATGGGTATTTaGAGGCGAGGGTCATTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EGHCPTATEIMFKNMQRNRYMGI*RRGSFQ Trigger: CTGGAATGACCCTCGCCTTCAAATACCCATGTACCT...ATTTCTTTGCATGTTCTTGAACATGATTTCAGTGGCTGTAGGACAGTGACCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207772.3 |
||
| CDS-3UTR GCA 90 bp | TTTGCTATCACACTGAAGTCTTTTTCAGAGGGTCACTGTCCTACAGCCACTGAACATGTCTTCATCCTGTaGTTTTTGGGATGCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FAITLKSFSEGHCPTATEHVFIL*FLGCRK Trigger: CTTCCTGCATCCCAAAAAGCACAGGATGAAGACATG...TTCAGTGGCTGTAGGACAGTGACCCTCTGAAAAAGACTTCAGTGTGATAGCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000207772.3 |
||
| CDS-3UTR CCA 90 bp | GAAAAATTTGCTATCACACTGAAGTCTTTTTCAGAGGGTCACTGTCCTACAGCCTCATCCTGTGCTTTTTaGGATGCAGGAAGCAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: EKFAITLKSFSEGHCPTASSCAF*DAGSRY Trigger: GTATCTGCTTCCTGCATCCCAAAAAGCACAGGATGA...GGCTGTAGGACAGTGACCCTCTGAAAAAGACTTCAGTGTGATAGCAAATTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000207772.3 |
||
| CDS-3UTR TCA 90 bp | GAGGGTCACTGTCCTACAGCCACTGAAATCATGTTCAAGAACATGCAAAGAAATACAGTCTATTTGTCATaGTCACTGGGTACAGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EGHCPTATEIMFKNMQRNTVYLS*SLGTVR Trigger: CCTTACTGTACCCAGTGATCATGACAAATAGACTGT...ATTTCTTTGCATGTTCTTGAACATGATTTCAGTGGCTGTAGGACAGTGACCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207772.3 |
||
| CDS-3UTR TCA 90 bp | ATCACACTGAAGTCTTTTTCAGAGGGTCACTGTCCTACAGCCACTGAAATCATGCAGGAAGCAGATACATaGAGAGAAGAGAACCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: ITLKSFSEGHCPTATEIMQEADT*REENHN Trigger: ATTATGGTTCTCTTCTCTTCATGTATCTGCTTCCTG...CATGATTTCAGTGGCTGTAGGACAGTGACCCTCTGAAAAAGACTTCAGTGTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207772.3 |
||
| CDS-3UTR GCA 90 bp | GCTATCACACTGAAGTCTTTTTCAGAGGGTCACTGTCCTACAGCCACTGAAATCTTAATCGGAACAGCATaGCTTCATGAATTGAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AITLKSFSEGHCPTATEILIGTA*LHELKH Trigger: ATGCTTCAATTCATGAAGGCATGCTGTTCCGATTAA...GATTTCAGTGGCTGTAGGACAGTGACCCTCTGAAAAAGACTTCAGTGTGATAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207772.3 |
||
| CDS-3UTR TCA 90 bp | GAGGGTCACTGTCCTACAGCCACTGAAATCATGTTCAAGAACATGCAAAGAAATTGCACACATCACAAATaGAAAGAACTGTATCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: EGHCPTATEIMFKNMQRNCTHHK*KELYHA Trigger: TGCATGATACAGTTCTTTTCATTTGTGATGTGTGCA...ATTTCTTTGCATGTTCTTGAACATGATTTCAGTGGCTGTAGGACAGTGACCCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207772.3 |
||
| CDS-3UTR TCA 90 bp | ACAAAGTACAGCCACATTAAGCCAGCACACATTTGTGATATTTTGACTAAAAGATTTCCAGTGAGTCTTTaGTTTGCTTGTTTCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TKYSHIKPAHICDILTKRFPVSL*FACFSN Trigger: GTTTGAGAAACAAGCAAATCAAAGACTCACTGGAAA...TCTTTTAGTCAAAATATCACAAATGTGTGCTGGCTTAATGTGGCTGTACTTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207772.3 |
||
| CDS-3UTR CAA 90 bp | ACAAAGTACAGCCACATTAAGCCAGCACACATTTGTGATATTTTGACTAAAAGATTCATCCTGTGCTTTTaGGGATGCAGGAAGCAGATA | + |
|
Preference number: 5 (lower is better) Translates to: TKYSHIKPAHICDILTKRFILCF*GCRKQI Trigger: TATCTGCTTCCTGCATCCCAAAAAGCACAGGATGAA...TCTTTTAGTCAAAATATCACAAATGTGTGCTGGCTTAATGTGGCTGTACTTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000207772.3 |
||