Pregenerated sensors for OLFR196 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096695Ensembl transcript IDs: ENSMUST00000205471.3
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGAAAAAGCTTTATCTTTCAAGAAATTACAGTGATAGAGCAGGATaGCTGGTAAATTCCTTTAGCTTTCTCATATGTGCACATGGTGAA | + |
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Preference number: 1 (lower is better) Translates to: GKKLYLSRNYSDRAG*LVNSFSFLICAHGE Trigger: TTCACCATGTGCACATATGAGAAAGCTAAAGGAATTTACCAGGCATCCTGCTCTATCACTGTAATTTCTTGAAAGATAAAGCTTTTTCCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205471.3 |
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| 3UTR-3UTR GCA 90 bp | TGGGTGATAGACAAAGGAGGATTGCTGGGTTTAGCAGAATATGAACCTAGCTTGAGTGATAGAGCAGGATaGCTGGTAAATTCCTTTAGC | + |
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Preference number: 2 (lower is better) Translates to: WVIDKGGLLGLAEYEPSLSDRAG*LVNSFS Trigger: GCTAAAGGAATTTACCAGGCATCCTGCTCTATCACT...CAAGCTAGGTTCATATTCTGCTAAACCCAGCAATCCTCCTTTGTCTATCACCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205471.3 |
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| 3UTR CAA 90 bp | CAATTGTCTATACCATCTTTGGTGTGGGTGATAGACAAAGGAGGATaGCTGGGTTTAGCAGAATATGAACCTAGCTTGGGAAAAAGCTTT | + |
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Preference number: 2 (lower is better) Translates to: QLSIPSLVWVIDKGG*LGLAEYEPSLGKSF Trigger: AAAGCTTTTTCCCAAGCTAGGTTCATATTCTGCTAAACCCAGCAATCCTCCTTTGTCTATCACCCACACCAAAGATGGTATAGACAATTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205471.3 |
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| 3UTR-3UTR TCA 90 bp | TGGGTGATAGACAAAGGAGGATTGCTGGGTTTAGCAGAATATGAACCTAGCTTGCATATGTGCACATGGTaGAATGTACATAAGTGTACA | + |
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Preference number: 2 (lower is better) Translates to: WVIDKGGLLGLAEYEPSLHMCTW*NVHKCT Trigger: TGTACACTTATGTACATTTCACCATGTGCACATATG...CAAGCTAGGTTCATATTCTGCTAAACCCAGCAATCCTCCTTTGTCTATCACCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205471.3 |
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| 3UTR-3UTR TCA 90 bp | AAGCTTTATCTTTCAAGAAATTACAGTGATAGAGCAGGATGCCTGGTAAATTCCCTACATGCAGCCACATaGTTTCTGTGGCATTTTAAT | + |
|
Preference number: 2 (lower is better) Translates to: KLYLSRNYSDRAGCLVNSLHAAT*FLWHFN Trigger: ATTAAAATGCCACAGAAATCATGTGGCTGCATGTAG...GGAATTTACCAGGCATCCTGCTCTATCACTGTAATTTCTTGAAAGATAAAGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205471.3 |
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| 3UTR GCA 72 bp | CTTTATCTTTCAAGAAATTACAGTGATAGAGCAGGATaGCTGGTAAATTCCTTTAGCTTTCTCATATGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: LYLSRNYSDRAG*LVNSFSFLICA Trigger: TGCACATATGAGAAAGCTAAAGGAATTTACCAGGCATCCTGCTCTATCACTGTAATTTCTTGAAAGATAAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205471.3 |
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| CDS-3UTR CCA 90 bp | GTGATAGACAAAGGAGGATTGCTGGGTTTAGCAGAATATGAACCTAGCTTGGGAGGGGATTTTCCACTGTaGCAGATGACTGAGTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: VIDKGGLLGLAEYEPSLGGDFPL*QMTESC Trigger: ACAGGACTCAGTCATCTGCCACAGTGGAAAATCCCC...TCCCAAGCTAGGTTCATATTCTGCTAAACCCAGCAATCCTCCTTTGTCTATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205471.3 |
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| 3UTR CAA 72 bp | ATACCATCTTTGGTGTGGGTGATAGACAAAGGAGGATaGCTGGGTTTAGCAGAATATGAACCTAGCTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: IPSLVWVIDKGG*LGLAEYEPSLG Trigger: TCCCAAGCTAGGTTCATATTCTGCTAAACCCAGCAATCCTCCTTTGTCTATCACCCACACCAAAGATGGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205471.3 |
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| CDS-3UTR TCA 90 bp | AAGCTTTATCTTTCAAGAAATTACAGTGATAGAGCAGGATGCCTGGTAAATTCCCAGGACGCACATACATaGAGAGAAGAGAGCCATAGT | + |
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Preference number: 4 (lower is better) Translates to: KLYLSRNYSDRAGCLVNSQDAHT*REESHS Trigger: ACTATGGCTCTCTTCTCTTCATGTATGTGCGTCCTG...GGAATTTACCAGGCATCCTGCTCTATCACTGTAATTTCTTGAAAGATAAAGCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205471.3 |
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| CDS-3UTR TCA 90 bp | ACACATATGCTCCATACATTCACATACAAAGAGGACAGCAACAAAAACCTAGAGAAAGCATTAGGTAATTaGGAGAAGGGTCATTACAGG | + |
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Preference number: 4 (lower is better) Translates to: THMLHTFTYKEDSNKNLEKALGN*EKGHYR Trigger: CCTGTAATGACCCTTCTCTCAATTACCTAATGCTTT...CTCTAGGTTTTTGTTGCTGTCCTCTTTGTATGTGAATGTATGGAGCATATGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205471.3 |
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| 3UTR CAA 72 bp | GGATACATAGACAAGAGTTCATTTAAATGGCAGCTCTaGAGAAAAGGATATGTTCAGAAGTTAAGAGCATTA | + |
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Preference number: 4 (lower is better) Translates to: GYIDKSSFKWQL*RKGYVQKLRAL Trigger: TAATGCTCTTAACTTCTGAACATATCCTTTTCTCAAGAGCTGCCATTTAAATGAACTCTTGTCTATGTATCC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205471.3 |
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