Pregenerated sensors for OLFR19 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048101Ensembl transcript IDs: ENSMUST00000057886.6, ENSMUST00000206365.3
Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGACATCTGCAAAGTACATCACAATATCATTAAAACAGGTACCATaGCAGGCAAATGGCACCAGTACACATGCAAGGCATATTTTATAT | + |
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Preference number: 1 (lower is better) Translates to: RTSAKYITISLKQVP*QANGTSTHARHILY Trigger: ATATAAAATATGCCTTGCATGTGTACTGGTGCCATTTGCCTGCCATGGTACCTGTTTTAATGATATTGTGATGTACTTTGCAGATGTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206365.3 |
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| 3UTR-3UTR CCA 90 bp | ACCATGGCAGGCAAATGGCACCAGTACACATGCAAGGCATATTTTATATTAGTATACTGGGAAGAATACTaGAAAATTGGAAAGCATTGT | + |
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Preference number: 2 (lower is better) Translates to: TMAGKWHQYTCKAYFILVYWEEY*KIGKHC Trigger: ACAATGCTTTCCAATTTTCCAGTATTCTTCCCAGTA...TACTAATATAAAATATGCCTTGCATGTGTACTGGTGCCATTTGCCTGCCATGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206365.3 |
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| 3UTR-3UTR TCA 90 bp | CTACTCATCAGGACATCTGCAAAGTACATCACAATATCATTAAAACAGGTACCAAAATTGCTTCTGATATaGTACTGGGAAGAATACTGG | + |
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Preference number: 2 (lower is better) Translates to: LLIRTSAKYITISLKQVPKLLLI*YWEEYW Trigger: CCAGTATTCTTCCCAGTATCATATCAGAAGCAATTT...TGGTACCTGTTTTAATGATATTGTGATGTACTTTGCAGATGTCCTGATGAGTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206365.3 |
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| 3UTR CCA 72 bp | GCAAAGTACATCACAATATCATTAAAACAGGTACCATaGCAGGCAAATGGCACCAGTACACATGCAAGGCAT | + |
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Preference number: 3 (lower is better) Translates to: AKYITISLKQVP*QANGTSTHARH Trigger: ATGCCTTGCATGTGTACTGGTGCCATTTGCCTGCCATGGTACCTGTTTTAATGATATTGTGATGTACTTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206365.3 |
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| CDS-3UTR TCA 90 bp | AAAGAGTTACAATGCCAGTTCTGCTACCCAGACTATAGGCAGTTCTTGATAAATCAGCCGCAGTGCCATTaGACTCTGCAGCAAGGAATT | + |
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Preference number: 4 (lower is better) Translates to: KELQCQFCYPDYRQFLINQPQCH*TLQQGI Trigger: AATTCCTTGCTGCAGAGTTCAATGGCACTGCGGCTG...ATTTATCAAGAACTGCCTATAGTCTGGGTAGCAGAACTGGCATTGTAACTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057886.6 ENSMUST00000206365.3 |
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| CDS-3UTR TCA 90 bp | GGACAACTACTCATCAGGACATCTGCAAAGTACATCACAATATCATTAAAACAGCAGCCGCAGTGCCATTaGACTCTGCAGCAAGGAATT | + |
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Preference number: 4 (lower is better) Translates to: GQLLIRTSAKYITISLKQQPQCH*TLQQGI Trigger: AATTCCTTGCTGCAGAGTTCAATGGCACTGCGGCTG...CTGTTTTAATGATATTGTGATGTACTTTGCAGATGTCCTGATGAGTAGTTGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206365.3 |
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| CDS-3UTR GCA 90 bp | TTACAATGCCAGTTCTGCTACCCAGACTATAGGCAGTTCTTGATAAATGTGTCTCAGCAAGGAATTCAATaGTGTTGTGACCCAAGACCC | + |
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Preference number: 4 (lower is better) Translates to: LQCQFCYPDYRQFLINVSQQGIQ*CCDPRP Trigger: GGGTCTTGGGTCACAACAGCATTGAATTCCTTGCTG...AGACACATTTATCAAGAACTGCCTATAGTCTGGGTAGCAGAACTGGCATTGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057886.6 ENSMUST00000206365.3 |
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| CDS-3UTR GCA 90 bp | ACCATGGCAGGCAAATGGCACCAGTACACATGCAAGGCATATTTTATATTAGTACAGCAAGGAATTCAATaGTGTTGTGACCCAAGACCC | + |
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Preference number: 4 (lower is better) Translates to: TMAGKWHQYTCKAYFILVQQGIQ*CCDPRP Trigger: GGGTCTTGGGTCACAACAGCATTGAATTCCTTGCTG...TACTAATATAAAATATGCCTTGCATGTGTACTGGTGCCATTTGCCTGCCATGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206365.3 |
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| CDS-3UTR TCA 90 bp | CATGGCAGGCAAATGGCACCAGTACACATGCAAGGCATATTTTATATTAGTACAAATTCAATGCTGTTGTaGCCCAAGACCCCAAAACTA | + |
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Preference number: 4 (lower is better) Translates to: HGRQMAPVHMQGIFYISTNSMLL*PKTPKL Trigger: TAGTTTTGGGGTCTTGGGTCACAACAGCATTGAATT...TGTACTAATATAAAATATGCCTTGCATGTGTACTGGTGCCATTTGCCTGCCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000206365.3 |
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| CDS-3UTR GCA 90 bp | TTGATTAAAGAGTTACAATGCCAGTTCTGCTACCCAGACTATAGGCAGTTCTTGCCAAAAAGGAAAGGTTaGCATAGAGGATCCTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: LIKELQCQFCYPDYRQFLPKRKG*HRGSSE Trigger: TTCAGAGGATCCTCTATGGCAACCTTTCCTTTTTGG...CAAGAACTGCCTATAGTCTGGGTAGCAGAACTGGCATTGTAACTCTTTAATCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057886.6 ENSMUST00000206365.3 |
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| CDS-3UTR GCA 90 bp | ACCATGGCAGGCAAATGGCACCAGTACACATGCAAGGCATATTTTATATTAGTACCAAAAAGGAAAGGTTaGCATAGAGGATCCTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: TMAGKWHQYTCKAYFILVPKRKG*HRGSSE Trigger: TTCAGAGGATCCTCTATGGCAACCTTTCCTTTTTGG...TACTAATATAAAATATGCCTTGCATGTGTACTGGTGCCATTTGCCTGCCATGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206365.3 |
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| CDS-3UTR GCA 90 bp | TTACAATGCCAGTTCTGCTACCCAGACTATAGGCAGTTCTTGATAAATGTGTCTAGTGCCATTGAACTCTaGAGCAAGGAATTCAATGCT | + |
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Preference number: 4 (lower is better) Translates to: LQCQFCYPDYRQFLINVSSAIEL*SKEFNA Trigger: AGCATTGAATTCCTTGCTGCAGAGTTCAATGGCACT...AGACACATTTATCAAGAACTGCCTATAGTCTGGGTAGCAGAACTGGCATTGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057886.6 ENSMUST00000206365.3 |
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| CDS-3UTR TCA 90 bp | AAAGAGTTACAATGCCAGTTCTGCTACCCAGACTATAGGCAGTTCTTGATAAATAATTCAATGCTGTTGTaGCCCAAGACCCCAAAACTA | + |
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Preference number: 4 (lower is better) Translates to: KELQCQFCYPDYRQFLINNSMLL*PKTPKL Trigger: TAGTTTTGGGGTCTTGGGTCACAACAGCATTGAATT...ATTTATCAAGAACTGCCTATAGTCTGGGTAGCAGAACTGGCATTGTAACTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057886.6 ENSMUST00000206365.3 |
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| CDS-3UTR TCA 90 bp | AAAGAGTTACAATGCCAGTTCTGCTACCCAGACTATAGGCAGTTCTTGATAAATGCAAGTAGTACCAGTTaGTTAAGCTCACAAACAAAG | + |
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Preference number: 4 (lower is better) Translates to: KELQCQFCYPDYRQFLINASSTS*LSSQTK Trigger: CTTTGTTTGTGAGCTTAATCAACTGGTACTACTTGC...ATTTATCAAGAACTGCCTATAGTCTGGGTAGCAGAACTGGCATTGTAACTCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057886.6 ENSMUST00000206365.3 |
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| CDS-3UTR CCA 90 bp | TTACAATGCCAGTTCTGCTACCCAGACTATAGGCAGTTCTTGATAAATGTGTCTAGCTCACAAACAAAGTaGGGAATTTTCAAGTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: LQCQFCYPDYRQFLINVSSSQTK*GIFKSV Trigger: TACAGACTTGAAAATTCCCCACTTTGTTTGTGAGCT...AGACACATTTATCAAGAACTGCCTATAGTCTGGGTAGCAGAACTGGCATTGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057886.6 ENSMUST00000206365.3 |
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| CDS-3UTR CCA 90 bp | CATGGCAGGCAAATGGCACCAGTACACATGCAAGGCATATTTTATATTAGTACAAGCTCACAAACAAAGTaGGGAATTTTCAAGTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: HGRQMAPVHMQGIFYISTSSQTK*GIFKSV Trigger: TACAGACTTGAAAATTCCCCACTTTGTTTGTGAGCT...TGTACTAATATAAAATATGCCTTGCATGTGTACTGGTGCCATTTGCCTGCCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206365.3 |
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| CDS-3UTR CAA 90 bp | TTACAATGCCAGTTCTGCTACCCAGACTATAGGCAGTTCTTGATAAATGTGTCTACAGCCGCAGTGCCATaGAACTCTGCAGCAAGGAAT | + |
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Preference number: 5 (lower is better) Translates to: LQCQFCYPDYRQFLINVSTAAVP*NSAARN Trigger: ATTCCTTGCTGCAGAGTTCAATGGCACTGCGGCTGT...AGACACATTTATCAAGAACTGCCTATAGTCTGGGTAGCAGAACTGGCATTGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057886.6 ENSMUST00000206365.3 |
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| CDS-3UTR CAA 90 bp | ACCATGGCAGGCAAATGGCACCAGTACACATGCAAGGCATATTTTATATTAGTAACAGCCGCAGTGCCATaGAACTCTGCAGCAAGGAAT | + |
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Preference number: 5 (lower is better) Translates to: TMAGKWHQYTCKAYFILVTAAVP*NSAARN Trigger: ATTCCTTGCTGCAGAGTTCAATGGCACTGCGGCTGT...TACTAATATAAAATATGCCTTGCATGTGTACTGGTGCCATTTGCCTGCCATGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206365.3 |
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