Pregenerated sensors for OLFR187 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043357Ensembl transcript IDs: ENSMUST00000206428.2, ENSMUST00000207673.4
Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS CCA 90 bp | GAGAGTGATCACCTTGCTCTTACCAAAGAAGTTAAGAAGCATCTTTaGGACCACTATGGAAGAAATAGATGTATCTACAAAAGCCAAGCT | + |
Preference number: 5 (lower is better) Translates to: ESDHLALTKEVKKHL*DHYGRNRCIYKSQA Trigger: AGCTTGGCTTTTGTAGATACATCTATTTCTTCCATAGTGGTCCCAAAGATGCTTCTTAACTTCTTTGGTAAGAGCAAGGTGATCACTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206428.2 ENSMUST00000207673.4 |
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CDS CCA 72 bp | CACCTTGCTCTTACCAAAGAAGTTAAGAAGCATCTTTaGGACCACTATGGAAGAAATAGATGTATCTACAAA | + |
Preference number: 6 (lower is better) Translates to: HLALTKEVKKHL*DHYGRNRCIYK Trigger: TTTGTAGATACATCTATTTCTTCCATAGTGGTCCCAAAGATGCTTCTTAACTTCTTTGGTAAGAGCAAGGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000206428.2 ENSMUST00000207673.4 |