RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR180 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000090629

Ensembl transcript IDs: ENSMUST00000171656.3, ENSMUST00000205883.2, ENSMUST00000206168.2

Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR TCA 90 bp ACATTCCTGGGAAGACTATCAAGAAGAAACCAGGTAAGGGCTTGGCCCAATGGCGCAGGTTACTGGTTATaGATGTGCCTATACTCATCT +
Preference number: 4 (lower is better)
Translates to: TFLGRLSRRNQVRAWPNGAGYWL*MCLYSS
Trigger: AGATGAGTATAGGCACATTCATAACCAGTAACCTGC...GCCATTGGGCCAAGCCCTTACCTGGTTTCTTCTTGATAGTCTTCCCAGGAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206168.2
CDS-3UTR TCA 90 bp AGATACATTCCTGGGAAGACTATCAAGAAGAAACCAGGTAAGGGCTTGGCCCAACTCTTCTTTGGCATCTaGAAACTTCGTCAAATGGTC +
Preference number: 4 (lower is better)
Translates to: RYIPGKTIKKKPGKGLAQLFFGI*KLRQMV
Trigger: GACCATTTGACGAAGTTTTCAGATGCCAAAGAAGAG...TTGGGCCAAGCCCTTACCTGGTTTCTTCTTGATAGTCTTCCCAGGAATGTATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206168.2
CDS-3UTR CCA 90 bp GATACATTCCTGGGAAGACTATCAAGAAGAAACCAGGTAAGGGCTTGGCCCAATTGTTGCCCTCTTCTTTaGCATCTGAAAACTTCGTCA +
Preference number: 4 (lower is better)
Translates to: DTFLGRLSRRNQVRAWPNCCPLL*HLKTSS
Trigger: TGACGAAGTTTTCAGATGCCAAAGAAGAGGGCAACA...ATTGGGCCAAGCCCTTACCTGGTTTCTTCTTGATAGTCTTCCCAGGAATGTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206168.2
CDS-3UTR GCA 90 bp AAAAATAGAAGCATCTATAGAGATTCCCTCAGATACATTCCTGGGAAGACTATCTGGTTCCAGAATCCTTaGCAGATGGCTCACAGTTGC +
Preference number: 4 (lower is better)
Translates to: KNRSIYRDSLRYIPGKTIWFQNP*QMAHSC
Trigger: GCAACTGTGAGCCATCTGGCAAGGATTCTGGAACCA...GATAGTCTTCCCAGGAATGTATCTGAGGGAATCTCTATAGATGCTTCTATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000206168.2
CDS-3UTR TCA 90 bp AAAAATAGAAGCATCTATAGAGATTCCCTCAGATACATTCCTGGGAAGACTATCAGAATCCCACCAGGATaGACTGTGTGGTCAAAGAGT +
Preference number: 4 (lower is better)
Translates to: KNRSIYRDSLRYIPGKTIRIPPG*TVWSKS
Trigger: ACTCTTTGACCACACAGTTCATCCTGGTGGGATTCT...GATAGTCTTCCCAGGAATGTATCTGAGGGAATCTCTATAGATGCTTCTATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000206168.2
CDS-3UTR TCA 90 bp TTAAAAATAGAAGCATCTATAGAGATTCCCTCAGATACATTCCTGGGAAGACTACAAGTCTGGGTGATCTaGGAATCCCACCAGGATGAA +
Preference number: 4 (lower is better)
Translates to: LKIEASIEIPSDTFLGRLQVWVI*ESHQDE
Trigger: TTCATCCTGGTGGGATTCTCAGATCACCCAGACTTG...TAGTCTTCCCAGGAATGTATCTGAGGGAATCTCTATAGATGCTTCTATTTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000206168.2
CDS-3UTR TCA 90 bp TCTATAGAGATTCCCTCAGATACATTCCTGGGAAGACTATCAAGAAGAAACCAGAAGAGACACCCTACATaGATCAAGGAATGCAGGTTA +
Preference number: 4 (lower is better)
Translates to: SIEIPSDTFLGRLSRRNQKRHPT*IKECRL
Trigger: TAACCTGCATTCCTTGATTCATGTAGGGTGTCTCTT...CTGGTTTCTTCTTGATAGTCTTCCCAGGAATGTATCTGAGGGAATCTCTATAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206168.2
CDS-3UTR TCA 90 bp CTTAAAAATAGAAGCATCTATAGAGATTCCCTCAGATACATTCCTGGGAAGACTGCTCACAGTTGCTTCTaGTTCCACATCCAGAGGATT +
Preference number: 4 (lower is better)
Translates to: LKNRSIYRDSLRYIPGKTAHSCF*FHIQRI
Trigger: AATCCTCTGGATGTGGAATCAGAAGCAACTGTGAGC...AGTCTTCCCAGGAATGTATCTGAGGGAATCTCTATAGATGCTTCTATTTTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000206168.2
CDS-3UTR GCA 90 bp AAAAATAGAAGCATCTATAGAGATTCCCTCAGATACATTCCTGGGAAGACTATCCATCCAGAGGATTGTTaGCCTCTTCTTTGGCATCTG +
Preference number: 4 (lower is better)
Translates to: KNRSIYRDSLRYIPGKTIHPEDC*PLLWHL
Trigger: CAGATGCCAAAGAAGAGGGCAACAATCCTCTGGATG...GATAGTCTTCCCAGGAATGTATCTGAGGGAATCTCTATAGATGCTTCTATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000206168.2
CDS-3UTR GCA 90 bp AAAAATAGAAGCATCTATAGAGATTCCCTCAGATACATTCCTGGGAAGACTATCTGCACAGGTAGAAAATaGTTTTCCTCTCCCATCCTT +
Preference number: 4 (lower is better)
Translates to: KNRSIYRDSLRYIPGKTICTGRK*FSSPIL
Trigger: AAGGATGGGAGAGGAAAAGCATTTTCTACCTGTGCA...GATAGTCTTCCCAGGAATGTATCTGAGGGAATCTCTATAGATGCTTCTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000206168.2
CDS TCA 90 bp GACAGAGAACAGCAGGAACAGAGGTGTCTTCAAGTCTGGGTGATCTaGGAATCCCACCAGGATGAACTGTGTGGTCAAAGAGTGATTTGT +
Preference number: 5 (lower is better)
Translates to: DREQQEQRCLQVWVI*ESHQDELCGQRVIC
Trigger: ACAAATCACTCTTTGACCACACAGTTCATCCTGGTGGGATTCTCAGATCACCCAGACTTGAAGACACCTCTGTTCCTGCTGTTCTCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000171656.3
ENSMUST00000205883.2
ENSMUST00000206168.2
CDS-3UTR CAA 90 bp AAAAATAGAAGCATCTATAGAGATTCCCTCAGATACATTCCTGGGAAGACTATCTTGTTGCCCTCTTCTTaGGCATCTGAAAACTTCGTC +
Preference number: 5 (lower is better)
Translates to: KNRSIYRDSLRYIPGKTILLPSS*ASENFV
Trigger: GACGAAGTTTTCAGATGCCAAAGAAGAGGGCAACAA...GATAGTCTTCCCAGGAATGTATCTGAGGGAATCTCTATAGATGCTTCTATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000206168.2
CDS-3UTR CAA 90 bp CTTCTTAAAAATAGAAGCATCTATAGAGATTCCCTCAGATACATTCCTGGGAAGTTTCCTCTCCCATCCTaGGATTTCATCTTGAAAATA +
Preference number: 5 (lower is better)
Translates to: LLKNRSIYRDSLRYIPGKFPLPS*DFILKI
Trigger: TATTTTCAAGATGAAATCCAAGGATGGGAGAGGAAA...CTTCCCAGGAATGTATCTGAGGGAATCTCTATAGATGCTTCTATTTTTAAGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000206168.2
CDS TCA 72 bp CAGCAGGAACAGAGGTGTCTTCAAGTCTGGGTGATCTaGGAATCCCACCAGGATGAACTGTGTGGTCAAAGA +
Preference number: 6 (lower is better)
Translates to: QQEQRCLQVWVI*ESHQDELCGQR
Trigger: TCTTTGACCACACAGTTCATCCTGGTGGGATTCTCAGATCACCCAGACTTGAAGACACCTCTGTTCCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000171656.3
ENSMUST00000205883.2
ENSMUST00000206168.2
CDS CAA 90 bp GTCCGTGTGGCTCTTCTAGAGTATCTCACTTTGGTTCCAGAATCCTaGCCAGATGGCTCACAGTTGCTTCTGATTCCACATCCAGAGGAT +
Preference number: 6 (lower is better)
Translates to: VRVALLEYLTLVPES*PDGSQLLLIPHPED
Trigger: ATCCTCTGGATGTGGAATCAGAAGCAACTGTGAGCCATCTGGCAAGGATTCTGGAACCAAAGTGAGATACTCTAGAAGAGCCACACGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206168.2
CDS CAA 72 bp ACTTTGGTTCCAGAATCCTTGCCAGATGGCTCACAGTaGCTTCTGATTCCACATCCAGAGGATTGTTGCCCT +
Preference number: 6 (lower is better)
Translates to: TLVPESLPDGSQ*LLIPHPEDCCP
Trigger: AGGGCAACAATCCTCTGGATGTGGAATCAGAAGCAACTGTGAGCCATCTGGCAAGGATTCTGGAACCAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206168.2
CDS CAA 90 bp CTTGCCAGATGGCTCACAGTTGCTTCTGATTCCACATCCAGAGGATaGTTGCCCTCTTCTTTGGCATCTGAAAACTTCGTCAAATGGTCT +
Preference number: 6 (lower is better)
Translates to: LARWLTVASDSTSRG*LPSSLASENFVKWS
Trigger: AGACCATTTGACGAAGTTTTCAGATGCCAAAGAAGAGGGCAACAATCCTCTGGATGTGGAATCAGAAGCAACTGTGAGCCATCTGGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206168.2
CDS TCA 72 bp TTCCAGAATCCTTGCCAGATGGCTCACAGTTGCTTCTaGTTCCACATCCAGAGGATTGTTGCCCTCTTCTTT +
Preference number: 6 (lower is better)
Translates to: FQNPCQMAHSCF*FHIQRIVALFF
Trigger: AAAGAAGAGGGCAACAATCCTCTGGATGTGGAATCAGAAGCAACTGTGAGCCATCTGGCAAGGATTCTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206168.2
CDS CCA 72 bp AGAGTATCTCACTTTGGTTCCAGAATCCTTGCCAGATaGCTCACAGTTGCTTCTGATTCCACATCCAGAGGA +
Preference number: 6 (lower is better)
Translates to: RVSHFGSRILAR*LTVASDSTSRG
Trigger: TCCTCTGGATGTGGAATCAGAAGCAACTGTGAGCCATCTGGCAAGGATTCTGGAACCAAAGTGAGATACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206168.2
CDS CAA 72 bp TGGCTCACAGTTGCTTCTGATTCCACATCCAGAGGATaGTTGCCCTCTTCTTTGGCATCTGAAAACTTCGTC +
Preference number: 6 (lower is better)
Translates to: WLTVASDSTSRG*LPSSLASENFV
Trigger: GACGAAGTTTTCAGATGCCAAAGAAGAGGGCAACAATCCTCTGGATGTGGAATCAGAAGCAACTGTGAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206168.2
CDS TCA 72 bp TCTTCAAGTCTGGGTGATCTGAGAATCCCACCAGGATaGACTGTGTGGTCAAAGAGTGATTTGTCTTCTCCA +
Preference number: 6 (lower is better)
Translates to: SSSLGDLRIPPG*TVWSKSDLSSP
Trigger: TGGAGAAGACAAATCACTCTTTGACCACACAGTTCATCCTGGTGGGATTCTCAGATCACCCAGACTTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000171656.3
ENSMUST00000205883.2
ENSMUST00000206168.2
CDS CAA 72 bp GCTCTTCTAGAGTATCTCACTTTGGTTCCAGAATCCTaGCCAGATGGCTCACAGTTGCTTCTGATTCCACAT +
Preference number: 6 (lower is better)
Translates to: ALLEYLTLVPES*PDGSQLLLIPH
Trigger: ATGTGGAATCAGAAGCAACTGTGAGCCATCTGGCAAGGATTCTGGAACCAAAGTGAGATACTCTAGAAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206168.2
CDS CAA 72 bp CTCACAGTTGCTTCTGATTCCACATCCAGAGGATTGTaGCCCTCTTCTTTGGCATCTGAAAACTTCGTCAAA +
Preference number: 6 (lower is better)
Translates to: LTVASDSTSRGL*PSSLASENFVK
Trigger: TTTGACGAAGTTTTCAGATGCCAAAGAAGAGGGCAACAATCCTCTGGATGTGGAATCAGAAGCAACTGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206168.2
CDS GCA 72 bp TCACAGTTGCTTCTGATTCCACATCCAGAGGATTGTTaGCCTCTTCTTTGGCATCTGAAAACTTCGTCAAAT +
Preference number: 6 (lower is better)
Translates to: SQLLLIPHPEDC*PLLWHLKTSSN
Trigger: ATTTGACGAAGTTTTCAGATGCCAAAGAAGAGGGCAACAATCCTCTGGATGTGGAATCAGAAGCAACTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206168.2
CDS CCA 72 bp CTGATTCCACATCCAGAGGATTGTTGCCCTCTTCTTTaGCATCTGAAAACTTCGTCAAATGGTCTAATATAC +
Preference number: 6 (lower is better)
Translates to: LIPHPEDCCPLL*HLKTSSNGLIY
Trigger: GTATATTAGACCATTTGACGAAGTTTTCAGATGCCAAAGAAGAGGGCAACAATCCTCTGGATGTGGAATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206168.2
CDS CAA 72 bp TCTGATTCCACATCCAGAGGATTGTTGCCCTCTTCTTaGGCATCTGAAAACTTCGTCAAATGGTCTAATATA +
Preference number: 6 (lower is better)
Translates to: SDSTSRGLLPSS*ASENFVKWSNI
Trigger: TATATTAGACCATTTGACGAAGTTTTCAGATGCCAAAGAAGAGGGCAACAATCCTCTGGATGTGGAATCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206168.2