Pregenerated sensors for OLFR18 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066896Ensembl transcript IDs: ENSMUST00000086473.4, ENSMUST00000212943.4
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTACAAACAGTAAGTCACTATATGGGTGCTATAAATCAGATCCTTTaGAAAAGCTCCACAGGCATCAGTAATTTTTATAAAGACTTGAGC | + |
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Preference number: 1 (lower is better) Translates to: LQTVSHYMGAINQIL*KSSTGISNFYKDLS Trigger: GCTCAAGTCTTTATAAAAATTACTGATGCCTGTGGAGCTTTTGCAAAGGATCTGATTTATAGCACCCATATAGTGACTTACTGTTTGTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212943.4 |
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| 3UTR-3UTR CCA 90 bp | GTTTCTTCCATGTACATAATTATGACAGATGAATGCAGTGTCCAGAGAGGCCAGTTTGTGAGCTGGGCTTaGTGGTGCACGCCTTTAATC | + |
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Preference number: 2 (lower is better) Translates to: VSSMYIIMTDECSVQRGQFVSWA*WCTPLI Trigger: GATTAAAGGCGTGCACCACCAAGCCCAGCTCACAAA...CTGGCCTCTCTGGACACTGCATTCATCTGTCATAATTATGTACATGGAAGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212943.4 |
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| 3UTR-3UTR CCA 90 bp | GTTTCTTCCATGTACATAATTATGACAGATGAATGCAGTGTCCAGAGAGGCCAGAAGAATTTTGTGAGCTaGGCTTGGTGGTGCACGCCT | + |
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Preference number: 2 (lower is better) Translates to: VSSMYIIMTDECSVQRGQKNFVS*AWWCTP Trigger: AGGCGTGCACCACCAAGCCCAGCTCACAAAATTCTT...CTGGCCTCTCTGGACACTGCATTCATCTGTCATAATTATGTACATGGAAGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212943.4 |
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| 3UTR-3UTR TCA 90 bp | ATATGTGCCTGGAAATGGAGTTGTCTATCACATGATCAACCTTCCAGGGATCACACAAAGAGCATGGGTTaGAGCTGTAGATCATCTGAG | + |
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Preference number: 2 (lower is better) Translates to: ICAWKWSCLSHDQPSRDHTKSMG*SCRSSE Trigger: CTCAGATGATCTACAGCTTCAACCCATGCTCTTTGT...GTGATCCCTGGAAGGTTGATCATGTGATAGACAACTCCATTTCCAGGCACATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212943.4 |
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| 3UTR-3UTR GCA 90 bp | TTCTTGTATTCTTTTATAACTGTGACCAATAGCACTGCCTATATGTGCCTGGAAAGCTGGGCTTGGTGGTaGACGCCTTTAATCCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: FLYSFITVTNSTAYMCLESWAWW*TPLIPA Trigger: TGCTGGGATTAAAGGCGTGCACCACCAAGCCCAGCT...TTCCAGGCACATATAGGCAGTGCTATTGGTCACAGTTATAAAAGAATACAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212943.4 |
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| 3UTR-3UTR TCA 90 bp | GTTTCTTCCATGTACATAATTATGACAGATGAATGCAGTGTCCAGAGAGGCCAGGAGTTGTCTATCACATaGTCAACCTTCCAGGGATCA | + |
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Preference number: 2 (lower is better) Translates to: VSSMYIIMTDECSVQRGQELSIT*STFQGS Trigger: TGATCCCTGGAAGGTTGATCATGTGATAGACAACTC...CTGGCCTCTCTGGACACTGCATTCATCTGTCATAATTATGTACATGGAAGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212943.4 |
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| 3UTR-3UTR CCA 90 bp | AACAGTAAGTCACTATATGGGTGCTATAAATCAGATCCTTTGCAAAAGCTCCACGGAGACAGAGACAGGTaGATTTCTGATCCAGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: NSKSLYGCYKSDPLQKLHGDRDR*ISDPAC Trigger: ACAGGCTGGATCAGAAATCCACCTGTCTCTGTCTCC...GTGGAGCTTTTGCAAAGGATCTGATTTATAGCACCCATATAGTGACTTACTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212943.4 |
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| 3UTR-3UTR CCA 90 bp | AACAGTAAGTCACTATATGGGTGCTATAAATCAGATCCTTTGCAAAAGCTCCACGAGAGTCCCATGAGGTaGAATTTACTTCCTTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: NSKSLYGCYKSDPLQKLHESPMR*NLLPSS Trigger: GGAGGAAGGAAGTAAATTCCACCTCATGGGACTCTC...GTGGAGCTTTTGCAAAGGATCTGATTTATAGCACCCATATAGTGACTTACTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212943.4 |
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| 3UTR-3UTR CCA 90 bp | ATATGTGCCTGGAAATGGAGTTGTCTATCACATGATCAACCTTCCAGGGATCACACAGTACAAAGAGCATaGGTTGAAGCTGTAGATCAT | + |
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Preference number: 2 (lower is better) Translates to: ICAWKWSCLSHDQPSRDHTVQRA*VEAVDH Trigger: ATGATCTACAGCTTCAACCCATGCTCTTTGTACTGT...GTGATCCCTGGAAGGTTGATCATGTGATAGACAACTCCATTTCCAGGCACATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212943.4 |
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| 3UTR CAA 90 bp | CACATTAAACTCCTCCCAGATTACCTCCCACTCCCTCTATATTTCTaGTATTCTTTTATAACTGTGACCAATAGCACTGCCTATATGTGC | + |
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Preference number: 2 (lower is better) Translates to: HIKLLPDYLPLPLYF*YSFITVTNSTAYMC Trigger: GCACATATAGGCAGTGCTATTGGTCACAGTTATAAAAGAATACAAGAAATATAGAGGGAGTGGGAGGTAATCTGGGAGGAGTTTAATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212943.4 |
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| 3UTR-3UTR TCA 90 bp | TTCTTGTATTCTTTTATAACTGTGACCAATAGCACTGCCTATATGTGCCTGGAAAGACAGGTGGATTTCTaGTCCAGCCTGTTCTACAAA | + |
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Preference number: 2 (lower is better) Translates to: FLYSFITVTNSTAYMCLERQVDF*SSLFYK Trigger: TTTGTAGAACAGGCTGGATCAGAAATCCACCTGTCT...TTCCAGGCACATATAGGCAGTGCTATTGGTCACAGTTATAAAAGAATACAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212943.4 |
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| 3UTR-3UTR TCA 90 bp | TTCTTGTATTCTTTTATAACTGTGACCAATAGCACTGCCTATATGTGCCTGGAAGAATTAAGAATTTTGTaGGCTGGGCTTGGTGGTGCA | + |
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Preference number: 2 (lower is better) Translates to: FLYSFITVTNSTAYMCLEELRIL*AGLGGA Trigger: TGCACCACCAAGCCCAGCTCACAAAATTCTTAATTC...TTCCAGGCACATATAGGCAGTGCTATTGGTCACAGTTATAAAAGAATACAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212943.4 |
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| 3UTR-3UTR CCA 90 bp | GTTTCTTCCATGTACATAATTATGACAGATGAATGCAGTGTCCAGAGAGGCCAGATATGTGCCTGGAAATaGAGTTGTCTATCACATGAT | + |
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Preference number: 2 (lower is better) Translates to: VSSMYIIMTDECSVQRGQICAWK*SCLSHD Trigger: ATCATGTGATAGACAACTCCATTTCCAGGCACATAT...CTGGCCTCTCTGGACACTGCATTCATCTGTCATAATTATGTACATGGAAGAAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212943.4 |
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| 3UTR-3UTR TCA 90 bp | TTCTTGTATTCTTTTATAACTGTGACCAATAGCACTGCCTATATGTGCCTGGAATATAGAATTTCCCTGTaGTATGGAAGGAAAGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: FLYSFITVTNSTAYMCLEYRISL*YGRKEG Trigger: TCCTTCTTTCCTTCCATATCACAGGGAAATTCTATA...TTCCAGGCACATATAGGCAGTGCTATTGGTCACAGTTATAAAAGAATACAAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212943.4 |
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| 3UTR GCA 72 bp | ATAAGAATTAAGAATTTTGTGAGCTGGGCTTGGTGGTaGACGCCTTTAATCCCAGCACTCGGGAGACAGAGA | + |
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Preference number: 3 (lower is better) Translates to: IRIKNFVSWAWW*TPLIPALGRQR Trigger: TCTCTGTCTCCCGAGTGCTGGGATTAAAGGCGTGCACCACCAAGCCCAGCTCACAAAATTCTTAATTCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212943.4 |
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| 3UTR TCA 72 bp | GCCTATATGTGCCTGGAAATGGAGTTGTCTATCACATaGTCAACCTTCCAGGGATCACACACCAAACAAAGG | + |
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Preference number: 3 (lower is better) Translates to: AYMCLEMELSIT*STFQGSHTKQR Trigger: CCTTTGTTTGGTGTGTGATCCCTGGAAGGTTGATCATGTGATAGACAACTCCATTTCCAGGCACATATAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212943.4 |
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| 3UTR-3UTR CAA 90 bp | GTTTCTTCCATGTACATAATTATGACAGATGAATGCAGTGTCCAGAGAGGCCAGTATAAATCAGATCCTTaGCAAAAGCTCCACAGGCAT | + |
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Preference number: 3 (lower is better) Translates to: VSSMYIIMTDECSVQRGQYKSDP*QKLHRH Trigger: ATGCCTGTGGAGCTTTTGCAAAGGATCTGATTTATA...CTGGCCTCTCTGGACACTGCATTCATCTGTCATAATTATGTACATGGAAGAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212943.4 |
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| 3UTR TCA 72 bp | AATTTCATAACTGCATACAGTCACATTCACTCTGAATaGCACATTAAACTCCTCCCAGATTACCTCCCACTC | + |
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Preference number: 3 (lower is better) Translates to: NFITAYSHIHSE*HIKLLPDYLPL Trigger: GAGTGGGAGGTAATCTGGGAGGAGTTTAATGTGTCATTCAGAGTGAATGTGACTGTATGCAGTTATGAAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212943.4 |
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| 3UTR CAA 72 bp | CTCCTCCCAGATTACCTCCCACTCCCTCTATATTTCTaGTATTCTTTTATAACTGTGACCAATAGCACTGCC | + |
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Preference number: 4 (lower is better) Translates to: LLPDYLPLPLYF*YSFITVTNSTA Trigger: GGCAGTGCTATTGGTCACAGTTATAAAAGAATACAAGAAATATAGAGGGAGTGGGAGGTAATCTGGGAGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212943.4 |
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| CDS-3UTR TCA 90 bp | GTTTCTTCCATGTACATAATTATGACAGATGAATGCAGTGTCCAGAGAGGCCAGAACACCCAAACAGCATaGAAAAGGACATCTGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: VSSMYIIMTDECSVQRGQNTQTA*KRTSES Trigger: TGACTCAGATGTCCTTTTTCATGCTGTTTGGGTGTT...CTGGCCTCTCTGGACACTGCATTCATCTGTCATAATTATGTACATGGAAGAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212943.4 |
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| CDS-3UTR CCA 90 bp | AACAGTAAGTCACTATATGGGTGCTATAAATCAGATCCTTTGCAAAAGCTCCACATCCTGAATAGGAGATaGCTCTGTTGTGAGTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: NSKSLYGCYKSDPLQKLHILNRR*LCCESE Trigger: TTCAGACTCACAACAGAGCCATCTCCTATTCAGGAT...GTGGAGCTTTTGCAAAGGATCTGATTTATAGCACCCATATAGTGACTTACTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212943.4 |
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| CDS-3UTR GCA 90 bp | AACAGTAAGTCACTATATGGGTGCTATAAATCAGATCCTTTGCAAAAGCTCCACTTTGCTCTTCTATTTTaGTTGGACACCAGACTGTGT | + |
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Preference number: 4 (lower is better) Translates to: NSKSLYGCYKSDPLQKLHFALLF*LDTRLC Trigger: ACACAGTCTGGTGTCCAAGCAAAATAGAAGAGCAAA...GTGGAGCTTTTGCAAAGGATCTGATTTATAGCACCCATATAGTGACTTACTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212943.4 |
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| CDS-3UTR CCA 90 bp | TTCTTGTATTCTTTTATAACTGTGACCAATAGCACTGCCTATATGTGCCTGGAACTCTTCTATTTTGCTTaGACACCAGACTGTGTCATC | + |
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Preference number: 4 (lower is better) Translates to: FLYSFITVTNSTAYMCLELFYFA*TPDCVI Trigger: GATGACACAGTCTGGTGTCCAAGCAAAATAGAAGAG...TTCCAGGCACATATAGGCAGTGCTATTGGTCACAGTTATAAAAGAATACAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212943.4 |
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| CDS-3UTR TCA 90 bp | TTCTTGTATTCTTTTATAACTGTGACCAATAGCACTGCCTATATGTGCCTGGAAACTGAATTATGCAGCTaGGAGACAAAAAGACTGATT | + |
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Preference number: 4 (lower is better) Translates to: FLYSFITVTNSTAYMCLETELCS*ETKRLI Trigger: AATCAGTCTTTTTGTCTCTCAGCTGCATAATTCAGT...TTCCAGGCACATATAGGCAGTGCTATTGGTCACAGTTATAAAAGAATACAAGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212943.4 |
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| CDS-3UTR CAA 90 bp | GTTTCTTCCATGTACATAATTATGACAGATGAATGCAGTGTCCAGAGAGGCCAGCAACAGTGTACACTATaGATGCTACTGCACCCTTCC | + |
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Preference number: 5 (lower is better) Translates to: VSSMYIIMTDECSVQRGQQQCTL*MLLHPS Trigger: GGAAGGGTGCAGTAGCATCAATAGTGTACACTGTTG...CTGGCCTCTCTGGACACTGCATTCATCTGTCATAATTATGTACATGGAAGAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212943.4 |
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| CDS-3UTR CAA 90 bp | AACAGTAAGTCACTATATGGGTGCTATAAATCAGATCCTTTGCAAAAGCTCCACGCTCTTCTATTTTGCTaGGACACCAGACTGTGTCAT | + |
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Preference number: 5 (lower is better) Translates to: NSKSLYGCYKSDPLQKLHALLFC*DTRLCH Trigger: ATGACACAGTCTGGTGTCCAAGCAAAATAGAAGAGC...GTGGAGCTTTTGCAAAGGATCTGATTTATAGCACCCATATAGTGACTTACTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212943.4 |
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| CDS-3UTR CAA 90 bp | TTCTTGTATTCTTTTATAACTGTGACCAATAGCACTGCCTATATGTGCCTGGAAACCTATCATAAGCCATaGCAGTTAGAAGCAGACTAT | + |
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Preference number: 5 (lower is better) Translates to: FLYSFITVTNSTAYMCLETYHKP*QLEADY Trigger: ATAGTCTGCTTCTAACTGCAATGGCTTATGATAGGT...TTCCAGGCACATATAGGCAGTGCTATTGGTCACAGTTATAAAAGAATACAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212943.4 |
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| CDS CAA 72 bp | CTGAGATACGGGTTATATTTTGCTCTTCTATTTTGCTaGGACACCAGACTGTGTCATCTCTATGCTGATGCA | + |
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Preference number: 6 (lower is better) Translates to: LRYGLYFALLFC*DTRLCHLYADA Trigger: TGCATCAGCATAGAGATGACACAGTCTGGTGTCCAAGCAAAATAGAAGAGCAAAATATAACCCGTATCTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086473.4 ENSMUST00000212943.4 |
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