Pregenerated sensors for OLFR178 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000044029

Ensembl transcript IDs: ENSMUST00000206523.3, ENSMUST00000215032.2

Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR GCA 90 bp	AGAACGAAAATAATGACAGAAAGAAGGGAAGAGGAAGAGGAAGAGGAAGAGGAATACACACCCAGCTTTTaGCTGAAGATTTTTAAAGTT	+
Preference number: 2 (lower is better) Translates to: RTKIMTERREEEEEEEEEYTPSF*LKIFKV Trigger: AACTTTAAAAATCTTCAGGCAAAAGCTGGGTGTGTA...TTCCTCTTCCTCTTCCTCTTCCTCTTCCCTTCTTTCTGTCATTATTTTCGTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000206523.3 ENSMUST00000215032.2
3UTR-3UTR GCA 90 bp	GAGAAATGTAGACAAGAAGCTTATAAGACCACTTTGGAAAAGTCTCTAGTTCATGGAAGAATTTCTGAATaGTACACACCCAGCTTTTGC	+
Preference number: 2 (lower is better) Translates to: EKCRQEAYKTTLEKSLVHGRISE*YTPSFC Trigger: GCAAAAGCTGGGTGTGTAGCATTCAGAAATTCTTCC...ATGAACTAGAGACTTTTCCAAAGTGGTCTTATAAGCTTCTTGTCTACATTTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000206523.3 ENSMUST00000215032.2
3UTR TCA 72 bp	AGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAATTTCTaGATGCTACACACCCAGCTTTTGCCTGAAGATTTT	+
Preference number: 3 (lower is better) Translates to: RKRKRKRKRKNF*MLHTQLLPEDF Trigger: AAAATCTTCAGGCAAAAGCTGGGTGTGTAGCATTCAGAAATTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206523.3 ENSMUST00000215032.2
CDS-3UTR GCA 90 bp	GAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAATTTCTGAATGCTACACACTGCACAGGTAGAAAGTaGTTTTCCTCTCCCATCTTT	+
Preference number: 4 (lower is better) Translates to: EEEEEEEEEEEEFLNATHCTGRK*FSSPIF Trigger: AAAGATGGGAGAGGAAAAGCACTTTCTACCTGTGCA...GTGTGTAGCATTCAGAAATTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206523.3 ENSMUST00000215032.2
CDS-3UTR TCA 90 bp	GAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAATTTCTGAATGCTACACACAAGAGACACCCTACATaGAGAATGGAAATCAGGTTA	+
Preference number: 4 (lower is better) Translates to: EEEEEEEEEEEEFLNATHKRHPT*RMEIRL Trigger: TAACCTGATTTCCATTCTTCATGTAGGGTGTCTCTT...GTGTGTAGCATTCAGAAATTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000206523.3 ENSMUST00000215032.2
CDS-3UTR TCA 90 bp	AGAACGAAAATAATGACAGAAAGAAGGGAAGAGGAAGAGGAAGAGGAAGAGGAATGTGTGGTCAAAGAGTaGTTTGTCTTCTCTAGTCTC	+
Preference number: 4 (lower is better) Translates to: RTKIMTERREEEEEEEEECVVKE*FVFSSL Trigger: GAGACTAGAGAAGACAAATCACTCTTTGACCACACA...TTCCTCTTCCTCTTCCTCTTCCTCTTCCCTTCTTTCTGTCATTATTTTCGTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206523.3 ENSMUST00000215032.2
CDS-3UTR TCA 90 bp	AGAACGAAAATAATGACAGAAAGAAGGGAAGAGGAAGAGGAAGAGGAAGAGGAATCAGGTTACTGGCTATaGATGTGCCTATACTCATCT	+
Preference number: 4 (lower is better) Translates to: RTKIMTERREEEEEEEEESGYWL*MCLYSS Trigger: AGATGAGTATAGGCACATTCATAGCCAGTAACCTGA...TTCCTCTTCCTCTTCCTCTTCCTCTTCCCTTCTTTCTGTCATTATTTTCGTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206523.3 ENSMUST00000215032.2
CDS-3UTR TCA 90 bp	GGAAGAATTTCTGAATGCTACACACCCAGCTTTTGCCTGAAGATTTTTAAAGTTGTGAGCTGCAGAAGCTaGAGACCTTTTAAAAATGGT	+
Preference number: 4 (lower is better) Translates to: GRISECYTPSFCLKIFKVVSCRS*RPFKNG Trigger: ACCATTTTTAAAAGGTCTTCAGCTTCTGCAGCTCAC...AACTTTAAAAATCTTCAGGCAAAAGCTGGGTGTGTAGCATTCAGAAATTCTTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000206523.3 ENSMUST00000215032.2
CDS-3UTR CCA 90 bp	GGAAGAATTTCTGAATGCTACACACCCAGCTTTTGCCTGAAGATTTTTAAAGTTGAATGGAGAGTTTCTTaGACATCATGCTGTGGTACT	+
Preference number: 4 (lower is better) Translates to: GRISECYTPSFCLKIFKVEWRVS*TSCCGT Trigger: AGTACCACAGCATGATGTCCAAGAAACTCTCCATTC...AACTTTAAAAATCTTCAGGCAAAAGCTGGGTGTGTAGCATTCAGAAATTCTTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000206523.3 ENSMUST00000215032.2
CDS-3UTR TCA 90 bp	GAGAAATGTAGACAAGAAGCTTATAAGACCACTTTGGAAAAGTCTCTAGTTCATTGTGTGGTCAAAGAGTaGTTTGTCTTCTCTAGTCTC	+
Preference number: 4 (lower is better) Translates to: EKCRQEAYKTTLEKSLVHCVVKE*FVFSSL Trigger: GAGACTAGAGAAGACAAATCACTCTTTGACCACACA...ATGAACTAGAGACTTTTCCAAAGTGGTCTTATAAGCTTCTTGTCTACATTTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206523.3 ENSMUST00000215032.2
CDS-3UTR TCA 90 bp	GAGAAATGTAGACAAGAAGCTTATAAGACCACTTTGGAAAAGTCTCTAGTTCATGTGAGCTGCAGAAGCTaGAGACCTTTTAAAAATGGT	+
Preference number: 4 (lower is better) Translates to: EKCRQEAYKTTLEKSLVHVSCRS*RPFKNG Trigger: ACCATTTTTAAAAGGTCTTCAGCTTCTGCAGCTCAC...ATGAACTAGAGACTTTTCCAAAGTGGTCTTATAAGCTTCTTGTCTACATTTCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000206523.3 ENSMUST00000215032.2
CDS-3UTR GCA 90 bp	GAGAAATGTAGACAAGAAGCTTATAAGACCACTTTGGAAAAGTCTCTAGTTCATTGCACAGGTAGAAAGTaGTTTTCCTCTCCCATCTTT	+
Preference number: 4 (lower is better) Translates to: EKCRQEAYKTTLEKSLVHCTGRK*FSSPIF Trigger: AAAGATGGGAGAGGAAAAGCACTTTCTACCTGTGCA...ATGAACTAGAGACTTTTCCAAAGTGGTCTTATAAGCTTCTTGTCTACATTTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000206523.3 ENSMUST00000215032.2
CDS-3UTR CCA 90 bp	GAGAAATGTAGACAAGAAGCTTATAAGACCACTTTGGAAAAGTCTCTAGTTCATGAATGGAGAGTTTCTTaGACATCATGCTGTGGTACT	+
Preference number: 4 (lower is better) Translates to: EKCRQEAYKTTLEKSLVHEWRVS*TSCCGT Trigger: AGTACCACAGCATGATGTCCAAGAAACTCTCCATTC...ATGAACTAGAGACTTTTCCAAAGTGGTCTTATAAGCTTCTTGTCTACATTTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206523.3 ENSMUST00000215032.2
CDS-3UTR TCA 90 bp	GAGAAATGTAGACAAGAAGCTTATAAGACCACTTTGGAAAAGTCTCTAGTTCATAAGAGACACCCTACATaGAGAATGGAAATCAGGTTA	+
Preference number: 4 (lower is better) Translates to: EKCRQEAYKTTLEKSLVHKRHPT*RMEIRL Trigger: TAACCTGATTTCCATTCTTCATGTAGGGTGTCTCTT...ATGAACTAGAGACTTTTCCAAAGTGGTCTTATAAGCTTCTTGTCTACATTTCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206523.3 ENSMUST00000215032.2