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Pregenerated sensors for OLFR177 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000063137

Ensembl transcript IDs: ENSMUST00000072853.3, ENSMUST00000217377.2

Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp ACTTGGGTATTTTCTCTAGCTCCTTCATTGGGGACCCTGTGCTTTGTCCAATGGGGATGGATTTCCAGGTaGGGCAGGCTCTGGATGGTC +
Preference number: 2 (lower is better)
Translates to: TWVFSLAPSLGTLCFVQWGWISR*GRLWMV
Trigger: GACCATCCAGAGCCTGCCCCACCTGGAAATCCATCC...CCATTGGACAAAGCACAGGGTCCCCAATGAAGGAGCTAGAGAAAATACCCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000217377.2
3UTR-3UTR CCA 90 bp CTTCTGTATTTGTTAGTCACTGGTAGATCCTCTCAGGAGACAGCTATAGCAGGCGGGGCAGGCTCTGGATaGTCATTCCTTCAGTCTCTG +
Preference number: 2 (lower is better)
Translates to: LLYLLVTGRSSQETAIAGGAGSG*SFLQSL
Trigger: CAGAGACTGAAGGAATGACCATCCAGAGCCTGCCCC...GCCTGCTATAGCTGTCTCCTGAGAGGATCTACCAGTGACTAACAAATACAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217377.2
3UTR-3UTR TCA 90 bp CTTCTGTATTTGTTAGTCACTGGTAGATCCTCTCAGGAGACAGCTATAGCAGGCCACTCAGATAGCTTATaGCCAAATGACCAAAACGAA +
Preference number: 2 (lower is better)
Translates to: LLYLLVTGRSSQETAIAGHSDSL*PNDQNE
Trigger: TTCGTTTTGGTCATTTGGTCATAAGCTATCTGAGTG...GCCTGCTATAGCTGTCTCCTGAGAGGATCTACCAGTGACTAACAAATACAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217377.2
3UTR GCA 72 bp GTGGGGCAGGCTCTGGATGGTCATTCCTTCAGTCTCTaGTTCACACTTTGTCTCTGTAACTCCTTCCATGGG +
Preference number: 3 (lower is better)
Translates to: VGQALDGHSFSL*FTLCLCNSFHG
Trigger: CCCATGGAAGGAGTTACAGAGACAAAGTGTGAAGCAGAGACTGAAGGAATGACCATCCAGAGCCTGCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217377.2
3UTR CCA 72 bp TTGTTTATGGGATGGATTTCCAGGTGGGGCAGGCTCTaGATGGTCATTCCTTCAGTCTCTGCTTCACACTTT +
Preference number: 3 (lower is better)
Translates to: LFMGWISRWGRL*MVIPSVSASHF
Trigger: AAAGTGTGAAGCAGAGACTGAAGGAATGACCATCCAGAGCCTGCCCCACCTGGAAATCCATCCCATAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217377.2
3UTR CCA 72 bp GCATCTACAATAGTGTCTGGTTTTAGTGGTTGTTTATaGGATGGATTTCCAGGTGGGGCAGGCTCTGGATGG +
Preference number: 3 (lower is better)
Translates to: ASTIVSGFSGCL*DGFPGGAGSGW
Trigger: CCATCCAGAGCCTGCCCCACCTGGAAATCCATCCCATAAACAACCACTAAAACCAGACACTATTGTAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000217377.2
CDS-3UTR CCA 90 bp TCCAGGTGGGGCAGGCTCTGGATGGTCATTCCTTCAGTCTCTGCTTCACACTTTGAAGGCAGAGCTTCTTaGACATCATGCTGTGGTACT +
Preference number: 4 (lower is better)
Translates to: SRWGRLWMVIPSVSASHFEGRAS*TSCCGT
Trigger: AGTACCACAGCATGATGTCCAAGAAGCTCTGCCTTC...AAAGTGTGAAGCAGAGACTGAAGGAATGACCATCCAGAGCCTGCCCCACCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217377.2
3UTR CAA 72 bp CCTTCAGCTACTTGGGTATTTTCTCTAGCTCCTTCATaGGGGACCCTGTGCTTTGTCCAATGGATGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PSATWVFSLAPS*GTLCFVQWMAV
Trigger: CACAGCCATCCATTGGACAAAGCACAGGGTCCCCAATGAAGGAGCTAGAGAAAATACCCAAGTAGCTGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000217377.2
CDS-3UTR GCA 90 bp TTTTCTCTAGCTCCTTCATTGGGGACCCTGTGCTTTGTCCAATGGATGGCTGTGGAGGATGAACTCTGTTaGCAAGGAGTAGTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: FSLAPSLGTLCFVQWMAVEDELC*QGVVVL
Trigger: GAGGACAACTACTCCTTGGCAACAGAGTTCATCCTC...CACAGCCATCCATTGGACAAAGCACAGGGTCCCCAATGAAGGAGCTAGAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000217377.2
CDS-3UTR CCA 90 bp CATCCACTTCTGTATTTGTTAGTCACTGGTAGATCCTCTCAGGAGACAGCTATAACCCTATGTGAATCATaGAATGTAGGTTTCCTGCTA +
Preference number: 4 (lower is better)
Translates to: HPLLYLLVTGRSSQETAITLCES*NVGFLL
Trigger: TAGCAGGAAACCTACATTCCATGATTCACATAGGGT...TATAGCTGTCTCCTGAGAGGATCTACCAGTGACTAACAAATACAGAAGTGGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217377.2
CDS-3UTR CAA 90 bp GTCTCTGTAACTCCTTCCATGGGTATTAGTATCCACACTTTGGTCTTCCTTCTTAAGTTCTCTAGCATCTaGGGTGTGATGGCACAGGAG +
Preference number: 5 (lower is better)
Translates to: VSVTPSMGISIHTLVFLLKFSSI*GVMAQE
Trigger: CTCCTGTGCCATCACACCCAAGATGCTAGAGAACTT...AAGAAGGAAGACCAAAGTGTGGATACTAATACCCATGGAAGGAGTTACAGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217377.2
CDS TCA 72 bp TATAGCAACAGGTATGTCTTTATACCCTTCATTAAGTaGACTTGGTCGAATATACATGTAGAGGAGAGACCC +
Preference number: 6 (lower is better)
Translates to: YSNRYVFIPFIK*TWSNIHVEERP
Trigger: GGGTCTCTCCTCTACATGTATATTCGACCAAGTTCACTTAATGAAGGGTATAAAGACATACCTGTTGCTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072853.3
ENSMUST00000217377.2