Pregenerated sensors for OLFR173 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049362Ensembl transcript IDs: ENSMUST00000049940.5, ENSMUST00000206205.3
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCAGCAGAAAGAATGGAAACAGGCAGTCTTGGGTGGTAGGAGGTTaGGAGGACCCTCCAGAATGCATCAGAGACCTGGGAGGTGAGAGA | + |
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Preference number: 1 (lower is better) Translates to: ASRKNGNRQSWVVGG*EDPPECIRDLGGER Trigger: TCTCTCACCTCCCAGGTCTCTGATGCATTCTGGAGGGTCCTCCCAACCTCCTACCACCCAAGACTGCCTGTTTCCATTCTTTCTGCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206205.3 |
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| 3UTR CCA 90 bp | GGGGATCCACTTGGAAATAGGGGAGATCAGAGGAGGTATGGGATGTaGAACAGTAGGAGGGTGTATGTGTGTGTGTATGTGTGTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: GDPLGNRGDQRRYGM*NSRRVYVCVYVCVC Trigger: ACACACACACACATACACACACACATACACCCTCCTACTGTTCCACATCCCATACCTCCTCTGATCTCCCCTATTTCCAAGTGGATCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206205.3 |
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| 3UTR-3UTR GCA 90 bp | CAAGATCTCTCAAACACTGGACTACCAACCAGGCAGCATACACCAGCTGATATGCATACAGCAGAGAACTaGTGGGCTTGTGTTCATTCA | + |
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Preference number: 2 (lower is better) Translates to: QDLSNTGLPTRQHTPADMHTAEN*WACVHS Trigger: TGAATGAACACAAGCCCAGCAGTTCTCTGCTGTATG...CATATCAGCTGGTGTATGCTGCCTGGTTGGTAGTCCAGTGTTTGAGAGATCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206205.3 |
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| 3UTR-3UTR CCA 90 bp | GAGAGAACCCTGAGGAAAAGAAGATCCAGTGACAGACCCAAATTGAAGTCTAGCAGATCTCTCAAACACTaGACTACCAACCAGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: ERTLRKRRSSDRPKLKSSRSLKH*TTNQAA Trigger: TGCTGCCTGGTTGGTAGTCCAGTGTTTGAGAGATCT...GCTAGACTTCAATTTGGGTCTGTCACTGGATCTTCTTTTCCTCAGGGTTCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206205.3 |
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| 3UTR-3UTR TCA 90 bp | AGGGAACTTATAGAACCTATCTCCAGCAGGAAGACAGGGCATCAAATGAGGGAGGAAAAGAAGATCCAGTaGCAGACCCAAATTGAAGTC | + |
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Preference number: 2 (lower is better) Translates to: RELIEPISSRKTGHQMREEKKIQ*QTQIEV Trigger: GACTTCAATTTGGGTCTGTCACTGGATCTTCTTTTC...CTCCCTCATTTGATGCCCTGTCTTCCTGCTGGAGATAGGTTCTATAAGTTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206205.3 |
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| 3UTR-3UTR TCA 90 bp | ATAGAACCTATCTCCAGCAGGAAGACAGGGCATCAAATGAGGGAGTCAAAATTCAAACGGAGAGAACCCTaGGGAAAAGAAGATCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: IEPISSRKTGHQMRESKFKRREP*GKEDPV Trigger: CACTGGATCTTCTTTTCCTCAGGGTTCTCTCCGTTT...GAATTTTGACTCCCTCATTTGATGCCCTGTCTTCCTGCTGGAGATAGGTTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206205.3 |
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| 3UTR-3UTR GCA 90 bp | TTAAGGACTGAATCCCTTAGAGCCAGCAGAAAGAATGGAAACAGGCAGTCTTGGTTCCACCTGGCACTCTaGCTCTTAAGAAAGCCTTAT | + |
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Preference number: 2 (lower is better) Translates to: LRTESLRASRKNGNRQSWFHLAL*LLRKPY Trigger: ATAAGGCTTTCTTAAGAGGCAGAGTGCCAGGTGGAA...CCAAGACTGCCTGTTTCCATTCTTTCTGCTGGCTCTAAGGGATTCAGTCCTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206205.3 |
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| 3UTR-3UTR CCA 90 bp | ATAGAACCTATCTCCAGCAGGAAGACAGGGCATCAAATGAGGGAGTCAAAATTCACAGCAGAGAACTGCTaGGCTTGTGTTCATTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: IEPISSRKTGHQMRESKFTAENC*ACVHSE Trigger: CTCTGAATGAACACAAGCCCAGCAGTTCTCTGCTGT...GAATTTTGACTCCCTCATTTGATGCCCTGTCTTCCTGCTGGAGATAGGTTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206205.3 |
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| 3UTR-3UTR CCA 90 bp | ATAGAACCTATCTCCAGCAGGAAGACAGGGCATCAAATGAGGGAGTCAAAATTCAGTATGACTGCACTGTaGAATACCCAACAGGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: IEPISSRKTGHQMRESKFSMTAL*NTQQGA Trigger: AGCTCCCTGTTGGGTATTCCACAGTGCAGTCATACT...GAATTTTGACTCCCTCATTTGATGCCCTGTCTTCCTGCTGGAGATAGGTTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206205.3 |
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| 3UTR-3UTR GCA 90 bp | AGAATTACAGGGATGGAAACGGAGAGAACCCTGAGGAAAAGAAGATCCAGTGACTCAGATGCAGATATTTaGACCCAACCAATGGATAGA | + |
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Preference number: 2 (lower is better) Translates to: RITGMETERTLRKRRSSDSDADI*TQPMDR Trigger: TCTATCCATTGGTTGGGTGCAAATATCTGCATCTGA...GTCACTGGATCTTCTTTTCCTCAGGGTTCTCTCCGTTTCCATCCCTGTAATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206205.3 |
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| 3UTR-3UTR TCA 90 bp | AGAATTACAGGGATGGAAACGGAGAGAACCCTGAGGAAAAGAAGATCCAGTGACCAATTTTGTTGCTCTTaGTTTCAAGTGACATTTCCC | + |
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Preference number: 2 (lower is better) Translates to: RITGMETERTLRKRRSSDQFCCS*FQVTFP Trigger: GGGAAATGTCACTTGAAATCAAGAGCAACAAAATTG...GTCACTGGATCTTCTTTTCCTCAGGGTTCTCTCCGTTTCCATCCCTGTAATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206205.3 |
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| 3UTR CAA 90 bp | CCTGGCACTCTGCCTCTTAAGAAAGCCTTATGGACTTTAACATTTTaGCACACAGTTTACAAGCAATTCTACTGTGTAATCTCATGTGAG | + |
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Preference number: 2 (lower is better) Translates to: PGTLPLKKALWTLTF*HTVYKQFYCVISCE Trigger: CTCACATGAGATTACACAGTAGAATTGCTTGTAAACTGTGTGCAAAAATGTTAAAGTCCATAAGGCTTTCTTAAGAGGCAGAGTGCCAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206205.3 |
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| 3UTR CCA 72 bp | GAGGTTGGGAGGACCCTCCAGAATGCATCAGAGACCTaGGAGGTGAGAGACTCTCAGGGCTCAAAGGGAGGG | + |
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Preference number: 3 (lower is better) Translates to: EVGRTLQNASET*EVRDSQGSKGG Trigger: CCCTCCCTTTGAGCCCTGAGAGTCTCTCACCTCCCAGGTCTCTGATGCATTCTGGAGGGTCCTCCCAACCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206205.3 |
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| 3UTR GCA 72 bp | TCTTGGGTGGTAGGAGGTTGGGAGGACCCTCCAGAATaGATCAGAGACCTGGGAGGTGAGAGACTCTCAGGG | + |
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Preference number: 3 (lower is better) Translates to: SWVVGGWEDPPE*IRDLGGERLSG Trigger: CCCTGAGAGTCTCTCACCTCCCAGGTCTCTGATGCATTCTGGAGGGTCCTCCCAACCTCCTACCACCCAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206205.3 |
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| 3UTR CCA 72 bp | TATGAGGCCCAAAGCACACATACAGCAGAGAACTGCTaGGCTTGTGTTCATTCAGAGACGATGCACCTAACC | + |
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Preference number: 3 (lower is better) Translates to: YEAQSTHTAENC*ACVHSETMHLT Trigger: GGTTAGGTGCATCGTCTCTGAATGAACACAAGCCCAGCAGTTCTCTGCTGTATGTGTGCTTTGGGCCTCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206205.3 |
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| 3UTR-3UTR CAA 90 bp | GATCTCTCAAACACTGGACTACCAACCAGGCAGCATACACCAGCTGATATGAGGAGAGAACTGCTGGGCTaGTGTTCATTCAGAGACGAT | + |
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Preference number: 3 (lower is better) Translates to: DLSNTGLPTRQHTPADMRRELLG*CSFRDD Trigger: ATCGTCTCTGAATGAACACAAGCCCAGCAGTTCTCT...CCTCATATCAGCTGGTGTATGCTGCCTGGTTGGTAGTCCAGTGTTTGAGAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206205.3 |
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| CDS-3UTR TCA 90 bp | AGAATTACAGGGATGGAAACGGAGAGAACCCTGAGGAAAAGAAGATCCAGTGACGCAGGTTTCCAGCTATaGAAGCTCCCGTCGTCATCT | + |
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Preference number: 4 (lower is better) Translates to: RITGMETERTLRKRRSSDAGFQL*KLPSSS Trigger: AGATGACGACGGGAGCTTTCATAGCTGGAAACCTGC...GTCACTGGATCTTCTTTTCCTCAGGGTTCTCTCCGTTTCCATCCCTGTAATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206205.3 |
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| CDS-3UTR TCA 90 bp | CAAGATCTCTCAAACACTGGACTACCAACCAGGCAGCATACACCAGCTGATATGGGACACAACCTATTGTaGAGACTTGGATTGAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: QDLSNTGLPTRQHTPADMGHNLL*RLGLSL Trigger: CAGGCTCAATCCAAGTCTTCACAATAGGTTGTGTCC...CATATCAGCTGGTGTATGCTGCCTGGTTGGTAGTCCAGTGTTTGAGAGATCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206205.3 |
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| CDS-3UTR CCA 90 bp | AGAATTACAGGGATGGAAACGGAGAGAACCCTGAGGAAAAGAAGATCCAGTGACCCTATTGTGAAGACTTaGATTGAGCCTGAAAAGACA | + |
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Preference number: 4 (lower is better) Translates to: RITGMETERTLRKRRSSDPIVKT*IEPEKT Trigger: TGTCTTTTCAGGCTCAATCCAAGTCTTCACAATAGG...GTCACTGGATCTTCTTTTCCTCAGGGTTCTCTCCGTTTCCATCCCTGTAATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206205.3 |
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| CDS-3UTR TCA 90 bp | GTTTACAAGCAATTCTACTGTGTAATCTCATGTGAGTTTTCTGCTGAATTGAGTGCAGGTTTCCAGCTATaGAAGCTCCCGTCGTCATCT | + |
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Preference number: 4 (lower is better) Translates to: VYKQFYCVISCEFSAELSAGFQL*KLPSSS Trigger: AGATGACGACGGGAGCTTTCATAGCTGGAAACCTGC...ACTCAATTCAGCAGAAAACTCACATGAGATTACACAGTAGAATTGCTTGTAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049940.5 ENSMUST00000206205.3 |
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| CDS-3UTR CCA 90 bp | CTGTCTGAAAGAATTACAGGGATGGAAACGGAGAGAACCCTGAGGAAAAGAAGAGAAGAGAACGTTCTTTaGAAATCAGAATCACCAGAC | + |
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Preference number: 4 (lower is better) Translates to: LSERITGMETERTLRKRREENVL*KSESPD Trigger: GTCTGGTGATTCTGATTTCCAAAGAACGTTCTCTTC...TCTTCTTTTCCTCAGGGTTCTCTCCGTTTCCATCCCTGTAATTCTTTCAGACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206205.3 |
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| CDS-3UTR TCA 90 bp | GTTTACAAGCAATTCTACTGTGTAATCTCATGTGAGTTTTCTGCTGAATTGAGTGGACACAACCTATTGTaGAGACTTGGATTGAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: VYKQFYCVISCEFSAELSGHNLL*RLGLSL Trigger: CAGGCTCAATCCAAGTCTTCACAATAGGTTGTGTCC...ACTCAATTCAGCAGAAAACTCACATGAGATTACACAGTAGAATTGCTTGTAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049940.5 ENSMUST00000206205.3 |
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| CDS-3UTR CCA 90 bp | GTTTACAAGCAATTCTACTGTGTAATCTCATGTGAGTTTTCTGCTGAATTGAGTGAAGAGAACGTTCTTTaGAAATCAGAATCACCAGAC | + |
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Preference number: 4 (lower is better) Translates to: VYKQFYCVISCEFSAELSEENVL*KSESPD Trigger: GTCTGGTGATTCTGATTTCCAAAGAACGTTCTCTTC...ACTCAATTCAGCAGAAAACTCACATGAGATTACACAGTAGAATTGCTTGTAAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049940.5 ENSMUST00000206205.3 |
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| CDS-3UTR CCA 90 bp | GTTTACAAGCAATTCTACTGTGTAATCTCATGTGAGTTTTCTGCTGAATTGAGTCCTATTGTGAAGACTTaGATTGAGCCTGAAAAGACA | + |
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Preference number: 4 (lower is better) Translates to: VYKQFYCVISCEFSAELSPIVKT*IEPEKT Trigger: TGTCTTTTCAGGCTCAATCCAAGTCTTCACAATAGG...ACTCAATTCAGCAGAAAACTCACATGAGATTACACAGTAGAATTGCTTGTAAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049940.5 ENSMUST00000206205.3 |
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| 3UTR CAA 72 bp | CTGCCTCTTAAGAAAGCCTTATGGACTTTAACATTTTaGCACACAGTTTACAAGCAATTCTACTGTGTAATC | + |
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Preference number: 4 (lower is better) Translates to: LPLKKALWTLTF*HTVYKQFYCVI Trigger: GATTACACAGTAGAATTGCTTGTAAACTGTGTGCAAAAATGTTAAAGTCCATAAGGCTTTCTTAAGAGGCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206205.3 |
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| 3UTR CAA 72 bp | CCCCTCCTTATCTCTCATGAAGAGGTACAGATAATTTaGGCTTATTTACTTGACAACAAAGCTTCTCAAATT | + |
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Preference number: 4 (lower is better) Translates to: PLLISHEEVQII*AYLLDNKASQI Trigger: AATTTGAGAAGCTTTGTTGTCAAGTAAATAAGCCAAAATTATCTGTACCTCTTCATGAGAGATAAGGAGGGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206205.3 |
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| CDS TCA 72 bp | GGATTGAGCCTGAAAAGACAAATAATACAAGCTCGTTaGTATAGGGGTCAACACAGGAGAGTCTGTACAAAG | + |
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Preference number: 6 (lower is better) Translates to: GLSLKRQIIQAR*YRGQHRRVCTK Trigger: CTTTGTACAGACTCTCCTGTGTTGACCCCTATATCAACGAGCTTGTATTATTTGTCTTTTCAGGCTCAATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049940.5 ENSMUST00000206205.3 |
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