Pregenerated sensors for OLFR171 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060480Ensembl transcript IDs: ENSMUST00000079891.4, ENSMUST00000205467.3
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TCGTGGGCTTCTCTATACAGACATAAACACATACCTGGGTACAATTACTCATTACGGGCCCCTGATGAGTaGATTTGGAATACAGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: SWASLYRHKHIPGYNYSLRAPDE*IWNTVR Trigger: CCTCACTGTATTCCAAATGCACTCATCAGGGGCCCG...TAATGAGTAATTGTACCCAGGTATGTGTTTATGTCTGTATAGAGAAGCCCACGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205467.3 |
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| CDS-3UTR TCA 90 bp | CGTGGGCTTCTCTATACAGACATAAACACATACCTGGGTACAATTACTCATTACACTTCGCAGAAAAAGTaGTCAATGGCCCTTGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: RGLLYTDINTYLGTITHYTSQKK*SMALEW Trigger: CCACTCAAGGGCCATTGATCACTTTTTCTGCGAAGT...GTAATGAGTAATTGTACCCAGGTATGTGTTTATGTCTGTATAGAGAAGCCCACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205467.3 |
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| CDS-3UTR TCA 90 bp | TCGTGGGCTTCTCTATACAGACATAAACACATACCTGGGTACAATTACTCATTACCCTGGAGTGTGGTATaGGCGAGGTCTCATATATGT | + |
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Preference number: 4 (lower is better) Translates to: SWASLYRHKHIPGYNYSLPWSVV*ARSHIC Trigger: ACATATATGAGACCTCGCTCATACCACACTCCAGGG...TAATGAGTAATTGTACCCAGGTATGTGTTTATGTCTGTATAGAGAAGCCCACGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205467.3 |
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| CDS-3UTR GCA 90 bp | AGACTTTATCGTGGGCTTCTCTATACAGACATAAACACATACCTGGGTACAATTGCCAGAAACTTATCCTaGCCTGGAGTGTGGTATGAG | + |
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Preference number: 4 (lower is better) Translates to: RLYRGLLYTDINTYLGTIARNLS*PGVWYE Trigger: CTCATACCACACTCCAGGGCAGGATAAGTTTCTGGC...AATTGTACCCAGGTATGTGTTTATGTCTGTATAGAGAAGCCCACGATAAAGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205467.3 |
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| CDS-3UTR CCA 90 bp | CGTGGGCTTCTCTATACAGACATAAACACATACCTGGGTACAATTACTCATTACTCAATGGCCCTTGAGTaGCAGAAGGGAAAGTGTAGT | + |
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Preference number: 4 (lower is better) Translates to: RGLLYTDINTYLGTITHYSMALE*QKGKCS Trigger: ACTACACTTTCCCTTCTGCCACTCAAGGGCCATTGA...GTAATGAGTAATTGTACCCAGGTATGTGTTTATGTCTGTATAGAGAAGCCCACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205467.3 |
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| CDS-3UTR TCA 90 bp | AGACTTTATCGTGGGCTTCTCTATACAGACATAAACACATACCTGGGTACAATTTATAGATTATGGGGTTaGGTGTGGGTGTCAGGATGG | + |
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Preference number: 4 (lower is better) Translates to: RLYRGLLYTDINTYLGTIYRLWG*VWVSGW Trigger: CCATCCTGACACCCACACTCAACCCCATAATCTATA...AATTGTACCCAGGTATGTGTTTATGTCTGTATAGAGAAGCCCACGATAAAGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205467.3 |
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| CDS-3UTR GCA 90 bp | TCGTGGGCTTCTCTATACAGACATAAACACATACCTGGGTACAATTACTCATTAATCATAGGACATGACTaGCAAGAGAAGGCACTCACC | + |
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Preference number: 4 (lower is better) Translates to: SWASLYRHKHIPGYNYSLIIGHD*QEKALT Trigger: GGTGAGTGCCTTCTCTTGGCAGTCATGTCCTATGAT...TAATGAGTAATTGTACCCAGGTATGTGTTTATGTCTGTATAGAGAAGCCCACGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205467.3 |
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| CDS-3UTR TCA 90 bp | CGTGGGCTTCTCTATACAGACATAAACACATACCTGGGTACAATTACTCATTACTGTTGTGTCTATACATaGCAACTTCAACATGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: RGLLYTDINTYLGTITHYCCVYT*QLQHGR Trigger: CCTGCCATGTTGAAGTTGTCATGTATAGACACAACA...GTAATGAGTAATTGTACCCAGGTATGTGTTTATGTCTGTATAGAGAAGCCCACG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205467.3 |
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| CDS-3UTR TCA 90 bp | CGTGGGCTTCTCTATACAGACATAAACACATACCTGGGTACAATTACTCATTACGCCCGTAGTACATTATaGCAACTACCATGTGGAATA | + |
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Preference number: 4 (lower is better) Translates to: RGLLYTDINTYLGTITHYARSTL*QLPCGI Trigger: TATTCCACATGGTAGTTGTCATAATGTACTACGGGC...GTAATGAGTAATTGTACCCAGGTATGTGTTTATGTCTGTATAGAGAAGCCCACG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205467.3 |
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| CDS-3UTR CCA 90 bp | AGACTTTATCGTGGGCTTCTCTATACAGACATAAACACATACCTGGGTACAATTAAATACATTGGGGTATaGAGTCGAGAATCCCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: RLYRGLLYTDINTYLGTIKYIGV*SRESLW Trigger: CCACAGGGATTCTCGACTCCATACCCCAATGTATTT...AATTGTACCCAGGTATGTGTTTATGTCTGTATAGAGAAGCCCACGATAAAGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205467.3 |
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| CDS-3UTR CCA 90 bp | TCGTGGGCTTCTCTATACAGACATAAACACATACCTGGGTACAATTACTCATTAGAGCAGGAAATACATTaGGGTATGGAGTCGAGAATC | + |
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Preference number: 4 (lower is better) Translates to: SWASLYRHKHIPGYNYSLEQEIH*GMESRI Trigger: GATTCTCGACTCCATACCCCAATGTATTTCCTGCTC...TAATGAGTAATTGTACCCAGGTATGTGTTTATGTCTGTATAGAGAAGCCCACGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205467.3 |
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| CDS-3UTR CCA 90 bp | TATCGTGGGCTTCTCTATACAGACATAAACACATACCTGGGTACAATTACTCATAGAGAGAGAAATATCTaGAAGGCACAGCCTGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: YRGLLYTDINTYLGTITHRERNI*KAQPAK Trigger: CTTTGCAGGCTGTGCCTTCCAGATATTTCTCTCTCT...ATGAGTAATTGTACCCAGGTATGTGTTTATGTCTGTATAGAGAAGCCCACGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205467.3 |
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| CDS-3UTR CCA 90 bp | TATCGTGGGCTTCTCTATACAGACATAAACACATACCTGGGTACAATTACTCATAGAAAAAGTGATCAATaGCCCTTGAGTGGCAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: YRGLLYTDINTYLGTITHRKSDQ*PLSGRR Trigger: CCTTCTGCCACTCAAGGGCCATTGATCACTTTTTCT...ATGAGTAATTGTACCCAGGTATGTGTTTATGTCTGTATAGAGAAGCCCACGATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205467.3 |
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| CDS-3UTR CCA 90 bp | TCGTGGGCTTCTCTATACAGACATAAACACATACCTGGGTACAATTACTCATTATGTGGAATAAACAGGTaGAAAAGGACTTTTGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: SWASLYRHKHIPGYNYSLCGINR*KRTFAG Trigger: CCCGGCAAAAGTCCTTTTCCACCTGTTTATTCCACA...TAATGAGTAATTGTACCCAGGTATGTGTTTATGTCTGTATAGAGAAGCCCACGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205467.3 |
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| CDS-3UTR CCA 90 bp | TATCGTGGGCTTCTCTATACAGACATAAACACATACCTGGGTACAATTACTCATGTGTGGGTGTCAGGATaGTGTAGAATATTGCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: YRGLLYTDINTYLGTITHVWVSG*CRILPE Trigger: TTCTGGCAATATTCTACACCATCCTGACACCCACAC...ATGAGTAATTGTACCCAGGTATGTGTTTATGTCTGTATAGAGAAGCCCACGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205467.3 |
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| CDS-3UTR GCA 90 bp | TATCGTGGGCTTCTCTATACAGACATAAACACATACCTGGGTACAATTACTCATGATGGTGTAGAATATTaGCAGAAACTTATCCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: YRGLLYTDINTYLGTITHDGVEY*QKLILP Trigger: GGGCAGGATAAGTTTCTGGCAATATTCTACACCATC...ATGAGTAATTGTACCCAGGTATGTGTTTATGTCTGTATAGAGAAGCCCACGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205467.3 |
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| CDS-3UTR CCA 90 bp | AGACTTTATCGTGGGCTTCTCTATACAGACATAAACACATACCTGGGTACAATTAGTACAAAAGCTGTGTaGACTATGGAGTTGAGGATC | + |
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Preference number: 4 (lower is better) Translates to: RLYRGLLYTDINTYLGTISTKAV*TMELRI Trigger: GATCCTCAACTCCATAGTCCACACAGCTTTTGTACT...AATTGTACCCAGGTATGTGTTTATGTCTGTATAGAGAAGCCCACGATAAAGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205467.3 |
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| CDS-3UTR TCA 90 bp | TATCGTGGGCTTCTCTATACAGACATAAACACATACCTGGGTACAATTACTCATGCATTTGGAATACAGTaGGGAGAATTTGCACATAAG | + |
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Preference number: 4 (lower is better) Translates to: YRGLLYTDINTYLGTITHAFGIQ*GEFAHK Trigger: CTTATGTGCAAATTCTCCTCACTGTATTCCAAATGC...ATGAGTAATTGTACCCAGGTATGTGTTTATGTCTGTATAGAGAAGCCCACGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205467.3 |
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| CDS-3UTR CCA 90 bp | TCGTGGGCTTCTCTATACAGACATAAACACATACCTGGGTACAATTACTCATTACCTGATGAGTGCATTTaGAATACAGTGAGGAGAATT | + |
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Preference number: 4 (lower is better) Translates to: SWASLYRHKHIPGYNYSLPDECI*NTVRRI Trigger: AATTCTCCTCACTGTATTCCAAATGCACTCATCAGG...TAATGAGTAATTGTACCCAGGTATGTGTTTATGTCTGTATAGAGAAGCCCACGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205467.3 |
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| CDS-3UTR CCA 90 bp | TCGTGGGCTTCTCTATACAGACATAAACACATACCTGGGTACAATTACTCATTAATGACAACTACCATGTaGAATAAACAGGTGGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: SWASLYRHKHIPGYNYSLMTTTM*NKQVEK Trigger: CTTTTCCACCTGTTTATTCCACATGGTAGTTGTCAT...TAATGAGTAATTGTACCCAGGTATGTGTTTATGTCTGTATAGAGAAGCCCACGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205467.3 |
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| CDS GCA 90 bp | AGCTGTGTGGACTATGGAGTTGAGGATCCCCACCAGCCAGGAGCCTaGAGCCAGGAGCCCACTGAAGTTATCCCTCATCAGCACAGGGTA | + |
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Preference number: 5 (lower is better) Translates to: SCVDYGVEDPHQPGA*SQEPTEVIPHQHRV Trigger: TACCCTGTGCTGATGAGGGATAACTTCAGTGGGCTCCTGGCTGCAGGCTCCTGGCTGGTGGGGATCCTCAACTCCATAGTCCACACAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079891.4 ENSMUST00000205467.3 |
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| CDS-3UTR CAA 90 bp | AGACTTTATCGTGGGCTTCTCTATACAGACATAAACACATACCTGGGTACAATTAAGTTAAGCTTATCTTaGAAGAGGAGAACAGTCCCA | + |
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Preference number: 5 (lower is better) Translates to: RLYRGLLYTDINTYLGTIKLSLS*KRRTVP Trigger: TGGGACTGTTCTCCTCTTCAAAGATAAGCTTAACTT...AATTGTACCCAGGTATGTGTTTATGTCTGTATAGAGAAGCCCACGATAAAGTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205467.3 |
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| CDS-3UTR CAA 90 bp | TATCGTGGGCTTCTCTATACAGACATAAACACATACCTGGGTACAATTACTCATCTCGTTCATAGTGTGTaGTGTCTATACATGACAACT | + |
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Preference number: 5 (lower is better) Translates to: YRGLLYTDINTYLGTITHLVHSV*CLYMTT Trigger: AGTTGTCATGTATAGACACAACACACTATGAACGAG...ATGAGTAATTGTACCCAGGTATGTGTTTATGTCTGTATAGAGAAGCCCACGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205467.3 |
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