Pregenerated sensors for OLFR170 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062245Ensembl transcript IDs: ENSMUST00000078603.3, ENSMUST00000206562.3, ENSMUST00000218837.2
Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS GCA 90 bp | AGCTGTGTGGACTATGGAGTTGAGGATCCCCACCAGCCAGGAGCCTaGAGCCAGGAGCCTACTGAAGTTATCCCTCATCAGCACAGGGTA | + |
Preference number: 5 (lower is better) Translates to: SCVDYGVEDPHQPGA*SQEPTEVIPHQHRV Trigger: TACCCTGTGCTGATGAGGGATAACTTCAGTAGGCTCCTGGCTGCAGGCTCCTGGCTGGTGGGGATCCTCAACTCCATAGTCCACACAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078603.3 ENSMUST00000206562.3 ENSMUST00000218837.2 |
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CDS CCA 72 bp | GAGTGGCAGAAGGGAAAGTGTAGTACAAAAGCTGTGTaGACTATGGAGTTGAGGATCCCCACCAGCCAGGAG | + |
Preference number: 6 (lower is better) Translates to: EWQKGKCSTKAV*TMELRIPTSQE Trigger: CTCCTGGCTGGTGGGGATCCTCAACTCCATAGTCCACACAGCTTTTGTACTACACTTTCCCTTCTGCCACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078603.3 ENSMUST00000206562.3 ENSMUST00000218837.2 |