Pregenerated sensors for OLFR17 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073897Ensembl transcript IDs: ENSMUST00000210568.4
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAAAGTTTCAGTAGGCGAATAGAGTCCCCTGGAAGAGTAGCCACTTaGAGAATTCATTGTTCTTTGTTTTGTCCTCACACCATGCTCTTG | + |
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Preference number: 1 (lower is better) Translates to: QSFSRRIESPGRVAT*RIHCSLFCPHTMLL Trigger: CAAGAGCATGGTGTGAGGACAAAACAAAGAACAATGAATTCTCCAAGTGGCTACTCTTCCAGGGGACTCTATTCGCCTACTGAAACTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| 3UTR TCA 90 bp | ATATGGCGAGCTGTAGGAAACTATCAACATTTAGTAGATCCTAGCTaGAGTACCGAGGAATATCTTAGAGAACCTAGTACCCCAGTCTCA | + |
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Preference number: 1 (lower is better) Translates to: IWRAVGNYQHLVDPS*STEEYLREPSTPVS Trigger: TGAGACTGGGGTACTAGGTTCTCTAAGATATTCCTCGGTACTTCAGCTAGGATCTACTAAATGTTGATAGTTTCCTACAGCTCGCCATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| 3UTR GCA 90 bp | AGAATGTGTTTACACACATGTATGCTGCCAGTATGCCAAGACTGCTaGTTGTTGAAAGTTCAGAGTTGTATGTGTTTACAGAGAAGGATC | + |
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Preference number: 1 (lower is better) Translates to: RMCLHTCMLPVCQDC*LLKVQSCMCLQRRI Trigger: GATCCTTCTCTGTAAACACATACAACTCTGAACTTTCAACAAGCAGCAGTCTTGGCATACTGGCAGCATACATGTGTGTAAACACATTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| 3UTR TCA 90 bp | AGGAAAGACCTCTTCAGTAAATGCTATTTACCCTGTCATGGTCATTaGATCGTTAAGAATGTGTTTACACACATGTATGCTGCCAGTATG | + |
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Preference number: 1 (lower is better) Translates to: RKDLFSKCYLPCHGH*IVKNVFTHMYAASM Trigger: CATACTGGCAGCATACATGTGTGTAAACACATTCTTAACGATTCAATGACCATGACAGGGTAAATAGCATTTACTGAAGAGGTCTTTCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| 3UTR GCA 90 bp | ATTGAATCGTTAAGAATGTGTTTACACACATGTATGCTGCCAGTATaGCAAGACTGCTGCTTGTTGAAAGTTCAGAGTTGTATGTGTTTA | + |
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Preference number: 1 (lower is better) Translates to: IESLRMCLHTCMLPV*QDCCLLKVQSCMCL Trigger: TAAACACATACAACTCTGAACTTTCAACAAGCAGCAGTCTTGGCATACTGGCAGCATACATGTGTGTAAACACATTCTTAACGATTCAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| 3UTR CAA 90 bp | TATGCTGCCAGTATGCCAAGACTGCTGCTTGTTGAAAGTTCAGAGTaGTATGTGTTTACAGAGAAGGATCCTGAAGAGAGGCTGCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: YAASMPRLLLVESSE*YVFTEKDPEERLLC Trigger: ACAGAGCAGCCTCTCTTCAGGATCCTTCTCTGTAAACACATACAACTCTGAACTTTCAACAAGCAGCAGTCTTGGCATACTGGCAGCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| 3UTR-3UTR CCA 90 bp | TACCCCAGTCTCAGTCAGCCTGCAGTATTTCCTTCAGCATCCTTGTTCTTTCATGGAAGAGTAGCCACTTaGAGAATTCATTGTTCTTTG | + |
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Preference number: 2 (lower is better) Translates to: YPSLSQPAVFPSASLFFHGRVAT*RIHCSL Trigger: CAAAGAACAATGAATTCTCCAAGTGGCTACTCTTCC...ATGAAAGAACAAGGATGCTGAAGGAAATACTGCAGGCTGACTGAGACTGGGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| 3UTR CAA 90 bp | TGTTTACACACATGTATGCTGCCAGTATGCCAAGACTGCTGCTTGTaGAAAGTTCAGAGTTGTATGTGTTTACAGAGAAGGATCCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: CLHTCMLPVCQDCCL*KVQSCMCLQRRILK Trigger: CTTCAGGATCCTTCTCTGTAAACACATACAACTCTGAACTTTCAACAAGCAGCAGTCTTGGCATACTGGCAGCATACATGTGTGTAAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| 3UTR-3UTR GCA 90 bp | ATCCTGAAGAGAGGCTGCTCTGTTAATCAAATGTACAGTCTTGAAAGAACAAGTCAGTCTCAGTCAGCCTaGAGTATTTCCTTCAGCATC | + |
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Preference number: 2 (lower is better) Translates to: ILKRGCSVNQMYSLERTSQSQSA*SISFSI Trigger: GATGCTGAAGGAAATACTGCAGGCTGACTGAGACTG...ACTTGTTCTTTCAAGACTGTACATTTGATTAACAGAGCAGCCTCTCTTCAGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| 3UTR-3UTR GCA 90 bp | AAATCAGTGAAGAGGAAAGACCTCTTCAGTAAATGCTATTTACCCTGTCATGGTCGAAGTATCTTTCATTaGTCCTCTTTCTCACTAGGA | + |
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Preference number: 2 (lower is better) Translates to: KSVKRKDLFSKCYLPCHGRSIFH*SSFSLG Trigger: TCCTAGTGAGAAAGAGGAGCAATGAAAGATACTTCG...ACCATGACAGGGTAAATAGCATTTACTGAAGAGGTCTTTCCTCTTCACTGATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| 3UTR-3UTR GCA 90 bp | AAATCAGTGAAGAGGAAAGACCTCTTCAGTAAATGCTATTTACCCTGTCATGGTATCCTGAAGAGAGGCTaGTCTGTTAATCAAATGTAC | + |
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Preference number: 2 (lower is better) Translates to: KSVKRKDLFSKCYLPCHGILKRG*SVNQMY Trigger: GTACATTTGATTAACAGAGCAGCCTCTCTTCAGGAT...ACCATGACAGGGTAAATAGCATTTACTGAAGAGGTCTTTCCTCTTCACTGATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| 3UTR GCA 72 bp | AGGGCTCTTGTTATCATGGTGCTGAAAGACACTTTGTaGAGGAAACAGCTGGTTGCAATTCCTCATGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: RALVIMVLKDTL*RKQLVAIPHGR Trigger: TCTGCCATGAGGAATTGCAACCAGCTGTTTCCTGCACAAAGTGTCTTTCAGCACCATGATAACAAGAGCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| 3UTR GCA 72 bp | ATCTTAGAGAACCTAGTACCCCAGTCTCAGTCAGCCTaGAGTATTTCCTTCAGCATCCTTGTTCTTTCATCC | + |
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Preference number: 3 (lower is better) Translates to: ILENLVPQSQSA*SISFSILVLSS Trigger: GGATGAAAGAACAAGGATGCTGAAGGAAATACTGCAGGCTGACTGAGACTGGGGTACTAGGTTCTCTAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| 3UTR TCA 72 bp | CATGTATGCTGCCAGTATGCCAAGACTGCTGCTTGTTaGAAGTTCAGAGTTGTATGTGTTTACAGAGAAGGA | + |
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Preference number: 3 (lower is better) Translates to: HVCCQYAKTAAC*KFRVVCVYREG Trigger: TCCTTCTCTGTAAACACATACAACTCTGAACTTTCAACAAGCAGCAGTCTTGGCATACTGGCAGCATACATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| 3UTR GCA 72 bp | TTACACACATGTATGCTGCCAGTATGCCAAGACTGCTaGTTGTTGAAAGTTCAGAGTTGTATGTGTTTACAG | + |
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Preference number: 3 (lower is better) Translates to: LHTCMLPVCQDC*LLKVQSCMCLQ Trigger: CTGTAAACACATACAACTCTGAACTTTCAACAAGCAGCAGTCTTGGCATACTGGCAGCATACATGTGTGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| 3UTR-3UTR CAA 90 bp | TCCTTGTTCTTTCATCCTCAAATGGACCCTAGTGGAGAGTCCAAAGTTTCAGTATCATTGTTCTTTGTTTaGTCCTCACACCATGCTCTT | + |
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Preference number: 3 (lower is better) Translates to: SLFFHPQMDPSGESKVSVSLFFV*SSHHAL Trigger: AAGAGCATGGTGTGAGGACAAAACAAAGAACAATGA...TACTGAAACTTTGGACTCTCCACTAGGGTCCATTTGAGGATGAAAGAACAAGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| 3UTR TCA 72 bp | GCTGTAGGAAACTATCAACATTTAGTAGATCCTAGCTaGAGTACCGAGGAATATCTTAGAGAACCTAGTACC | + |
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Preference number: 3 (lower is better) Translates to: AVGNYQHLVDPS*STEEYLREPST Trigger: GGTACTAGGTTCTCTAAGATATTCCTCGGTACTTCAGCTAGGATCTACTAAATGTTGATAGTTTCCTACAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| 3UTR GCA 72 bp | TGTTTACACACATGTATGCTGCCAGTATGCCAAGACTaGTGCTTGTTGAAAGTTCAGAGTTGTATGTGTTTA | + |
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Preference number: 3 (lower is better) Translates to: CLHTCMLPVCQD*CLLKVQSCMCL Trigger: TAAACACATACAACTCTGAACTTTCAACAAGCAGCAGTCTTGGCATACTGGCAGCATACATGTGTGTAAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| 3UTR GCA 72 bp | TTAAGAATGTGTTTACACACATGTATGCTGCCAGTATaGCAAGACTGCTGCTTGTTGAAAGTTCAGAGTTGT | + |
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Preference number: 3 (lower is better) Translates to: LRMCLHTCMLPV*QDCCLLKVQSC Trigger: ACAACTCTGAACTTTCAACAAGCAGCAGTCTTGGCATACTGGCAGCATACATGTGTGTAAACACATTCTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| 3UTR CCA 72 bp | TGCACCCTTCCTACCAAGGACTGTTCAATCTACCAGTaGATAATTTTTGATTATCTGTGCAGAGCATATGAT | + |
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Preference number: 3 (lower is better) Translates to: CTLPTKDCSIYQ*IIFDYLCRAYD Trigger: ATCATATGCTCTGCACAGATAATCAAAAATTATCCACTGGTAGATTGAACAGTCCTTGGTAGGAAGGGTGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| 3UTR-3UTR CAA 90 bp | ACCCTTCCTACCAAGGACTGTTCAATCTACCAGTGGATAATTTTTGATTATCTGCACTTGGAGAATTCATaGTTCTTTGTTTTGTCCTCA | + |
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Preference number: 3 (lower is better) Translates to: TLPTKDCSIYQWIIFDYLHLENS*FFVLSS Trigger: TGAGGACAAAACAAAGAACAATGAATTCTCCAAGTG...CAGATAATCAAAAATTATCCACTGGTAGATTGAACAGTCCTTGGTAGGAAGGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| 3UTR-3UTR CAA 90 bp | AAATCAGTGAAGAGGAAAGACCTCTTCAGTAAATGCTATTTACCCTGTCATGGTCTGATAAAAATGCCCTaGAAATACGTAGATAGTGTG | + |
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Preference number: 3 (lower is better) Translates to: KSVKRKDLFSKCYLPCHGLIKMP*KYVDSV Trigger: CACACTATCTACGTATTTCAAGGGCATTTTTATCAG...ACCATGACAGGGTAAATAGCATTTACTGAAGAGGTCTTTCCTCTTCACTGATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| 3UTR TCA 72 bp | CTCTTCAGTAAATGCTATTTACCCTGTCATGGTCATTaGATCGTTAAGAATGTGTTTACACACATGTATGCT | + |
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Preference number: 3 (lower is better) Translates to: LFSKCYLPCHGH*IVKNVFTHMYA Trigger: AGCATACATGTGTGTAAACACATTCTTAACGATTCAATGACCATGACAGGGTAAATAGCATTTACTGAAGAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| CDS-3UTR CCA 90 bp | GAAGTACCGAGGAATATCTTAGAGAACCTAGTACCCCAGTCTCAGTCAGCCTGCGAGACAACGAGGAGGTaGGAGGAGCAAGTGGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: EVPRNILENLVPQSQSACETTRR*EEQVEK Trigger: CTTTTCCACTTGCTCCTCCCACCTCCTCGTTGTCTC...GCAGGCTGACTGAGACTGGGGTACTAGGTTCTCTAAGATATTCCTCGGTACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| CDS-3UTR TCA 90 bp | TCCTTGTTCTTTCATCCTCAAATGGACCCTAGTGGAGAGTCCAAAGTTTCAGTACACAGACTAGGGCTATaGCAGGTGGGCTGTCACAGA | + |
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Preference number: 4 (lower is better) Translates to: SLFFHPQMDPSGESKVSVHRLGL*QVGCHR Trigger: TCTGTGACAGCCCACCTGTCATAGCCCTAGTCTGTG...TACTGAAACTTTGGACTCTCCACTAGGGTCCATTTGAGGATGAAAGAACAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| CDS-3UTR CCA 90 bp | ACCCTTCCTACCAAGGACTGTTCAATCTACCAGTGGATAATTTTTGATTATCTGGAGGCAGCTGCTAGCTaGGCACAGGATCTTCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: TLPTKDCSIYQWIIFDYLEAAAS*AQDLRL Trigger: GAGCCGAAGATCCTGTGCCCAGCTAGCAGCTGCCTC...CAGATAATCAAAAATTATCCACTGGTAGATTGAACAGTCCTTGGTAGGAAGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| 3UTR CAA 72 bp | AGTCTCAGTCAGCCTGCAGTATTTCCTTCAGCATCCTaGTTCTTTCATCCTCAAATGGACCCTAGTGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: SLSQPAVFPSAS*FFHPQMDPSGE Trigger: CTCTCCACTAGGGTCCATTTGAGGATGAAAGAACAAGGATGCTGAAGGAAATACTGCAGGCTGACTGAGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| CDS-3UTR TCA 90 bp | TCCTTGTTCTTTCATCCTCAAATGGACCCTAGTGGAGAGTCCAAAGTTTCAGTACCAGAGTTCTGTGAATaGTTCGCCTCAATGCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: SLFFHPQMDPSGESKVSVPEFCE*FASMQP Trigger: AGGCTGCATTGAGGCGAATCATTCACAGAACTCTGG...TACTGAAACTTTGGACTCTCCACTAGGGTCCATTTGAGGATGAAAGAACAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| CDS-3UTR CCA 90 bp | CTTCCTACCAAGGACTGTTCAATCTACCAGTGGATAATTTTTGATTATCTGTGCTTGCACAGTGGCTACTaGGAACCCGGAGAACCAAGA | + |
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Preference number: 4 (lower is better) Translates to: LPTKDCSIYQWIIFDYLCLHSGY*EPGEPR Trigger: TCTTGGTTCTCCGGGTTCCCAGTAGCCACTGTGCAA...GCACAGATAATCAAAAATTATCCACTGGTAGATTGAACAGTCCTTGGTAGGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| 3UTR CAA 72 bp | AGTATGCCAAGACTGCTGCTTGTTGAAAGTTCAGAGTaGTATGTGTTTACAGAGAAGGATCCTGAAGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: SMPRLLLVESSE*YVFTEKDPEER Trigger: CCTCTCTTCAGGATCCTTCTCTGTAAACACATACAACTCTGAACTTTCAACAAGCAGCAGTCTTGGCATACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| 3UTR CAA 72 bp | ACATGTATGCTGCCAGTATGCCAAGACTGCTGCTTGTaGAAAGTTCAGAGTTGTATGTGTTTACAGAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: TCMLPVCQDCCL*KVQSCMCLQRR Trigger: CCTTCTCTGTAAACACATACAACTCTGAACTTTCAACAAGCAGCAGTCTTGGCATACTGGCAGCATACATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| CDS-3UTR TCA 90 bp | CTCAGTCAGCCTGCAGTATTTCCTTCAGCATCCTTGTTCTTTCATCCTCAAATGTTCATAGGACAAGCTTaGGAAGCTCATGAGGATAAA | + |
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Preference number: 4 (lower is better) Translates to: LSQPAVFPSASLFFHPQMFIGQA*EAHEDK Trigger: TTTATCCTCATGAGCTTCTCAAGCTTGTCCTATGAA...CATTTGAGGATGAAAGAACAAGGATGCTGAAGGAAATACTGCAGGCTGACTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| CDS-3UTR TCA 90 bp | CTCAGTCAGCCTGCAGTATTTCCTTCAGCATCCTTGTTCTTTCATCCTCAAATGAACTGTGTAGGAGAGTaGCAACATTTTCTTGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: LSQPAVFPSASLFFHPQMNCVGE*QHFLVL Trigger: GAGAACAAGAAAATGTTGTCACTCTCCTACACAGTT...CATTTGAGGATGAAAGAACAAGGATGCTGAAGGAAATACTGCAGGCTGACTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| 3UTR CAA 72 bp | CCTGGAAGAGTAGCCACTTGGAGAATTCATTGTTCTTaGTTTTGTCCTCACACCATGCTCTTGTCAATATGT | + |
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Preference number: 4 (lower is better) Translates to: PGRVATWRIHCS*FCPHTMLLSIC Trigger: ACATATTGACAAGAGCATGGTGTGAGGACAAAACAAAGAACAATGAATTCTCCAAGTGGCTACTCTTCCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| CDS-3UTR GCA 90 bp | CTTCCTACCAAGGACTGTTCAATCTACCAGTGGATAATTTTTGATTATCTGTGCAAAATCCATGTGGTTTaGACAGTGGCTACTGGGAAC | + |
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Preference number: 4 (lower is better) Translates to: LPTKDCSIYQWIIFDYLCKIHVV*TVATGN Trigger: GTTCCCAGTAGCCACTGTGCAAACCACATGGATTTT...GCACAGATAATCAAAAATTATCCACTGGTAGATTGAACAGTCCTTGGTAGGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| CDS-3UTR GCA 90 bp | ATCCTGAAGAGAGGCTGCTCTGTTAATCAAATGTACAGTCTTGAAAGAACAAGTAAGTACATAGGACTTTaGAGAGCAGAGTCAGCTGTA | + |
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Preference number: 4 (lower is better) Translates to: ILKRGCSVNQMYSLERTSKYIGL*RAESAV Trigger: TACAGCTGACTCTGCTCTGCAAAGTCCTATGTACTT...ACTTGTTCTTTCAAGACTGTACATTTGATTAACAGAGCAGCCTCTCTTCAGGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| CDS-3UTR TCA 90 bp | CTTCCTACCAAGGACTGTTCAATCTACCAGTGGATAATTTTTGATTATCTGTGCCACAAAAAGGGAAACTaGAAATCCATGTGGTTTGCA | + |
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Preference number: 4 (lower is better) Translates to: LPTKDCSIYQWIIFDYLCHKKGN*KSMWFA Trigger: TGCAAACCACATGGATTTTCAGTTTCCCTTTTTGTG...GCACAGATAATCAAAAATTATCCACTGGTAGATTGAACAGTCCTTGGTAGGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| CDS-3UTR CAA 90 bp | TACCCCAGTCTCAGTCAGCCTGCAGTATTTCCTTCAGCATCCTTGTTCTTTCATGAAAATCCATGTGGTTaGCACAGTGGCTACTGGGAA | + |
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Preference number: 5 (lower is better) Translates to: YPSLSQPAVFPSASLFFHENPCG*HSGYWE Trigger: TTCCCAGTAGCCACTGTGCAAACCACATGGATTTTC...ATGAAAGAACAAGGATGCTGAAGGAAATACTGCAGGCTGACTGAGACTGGGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| CDS-3UTR CAA 90 bp | ACCCTTCCTACCAAGGACTGTTCAATCTACCAGTGGATAATTTTTGATTATCTGAGGATGATGAGGACATaGCCCATGAGTGTGACTAGG | + |
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Preference number: 5 (lower is better) Translates to: TLPTKDCSIYQWIIFDYLRMMRT*PMSVTR Trigger: CCTAGTCACACTCATGGGCAATGTCCTCATCATCCT...CAGATAATCAAAAATTATCCACTGGTAGATTGAACAGTCCTTGGTAGGAAGGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| CDS-3UTR CAA 90 bp | ATCCTGAAGAGAGGCTGCTCTGTTAATCAAATGTACAGTCTTGAAAGAACAAGTGAAGTACATAGGACTTaGCAGAGCAGAGTCAGCTGT | + |
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Preference number: 5 (lower is better) Translates to: ILKRGCSVNQMYSLERTSEVHRT*QSRVSC Trigger: ACAGCTGACTCTGCTCTGCAAAGTCCTATGTACTTC...ACTTGTTCTTTCAAGACTGTACATTTGATTAACAGAGCAGCCTCTCTTCAGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| CDS-3UTR CAA 90 bp | AAATCAGTGAAGAGGAAAGACCTCTTCAGTAAATGCTATTTACCCTGTCATGGTAGAGTACTCAACATCTaGGGCACAATGACCAAGTTG | + |
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Preference number: 5 (lower is better) Translates to: KSVKRKDLFSKCYLPCHGRVLNI*GTMTKL Trigger: CAACTTGGTCATTGTGCCCAAGATGTTGAGTACTCT...ACCATGACAGGGTAAATAGCATTTACTGAAGAGGTCTTTCCTCTTCACTGATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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| CDS-3UTR CAA 90 bp | ATCCTGAAGAGAGGCTGCTCTGTTAATCAAATGTACAGTCTTGAAAGAACAAGTAGTGACAACATTTTCTaGTTCTCAGGGGAGGTGTTT | + |
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Preference number: 5 (lower is better) Translates to: ILKRGCSVNQMYSLERTSSDNIF*FSGEVF Trigger: AAACACCTCCCCTGAGAACAAGAAAATGTTGTCACT...ACTTGTTCTTTCAAGACTGTACATTTGATTAACAGAGCAGCCTCTCTTCAGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210568.4 |
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