Pregenerated sensors for OLFR160 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061165Ensembl transcript IDs: ENSMUST00000211952.3, ENSMUST00000215727.2
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATCCAGCAGGAGCCTCATGTGTACTCTGCTTGGTGGTTTAGTCTCTaGGAGCTTTGGGGTGGGGGTGGTTGGTTGATATTGTTGCTCTTC | + |
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Preference number: 1 (lower is better) Translates to: IQQEPHVYSAWWFSL*ELWGGGGWLILLLF Trigger: GAAGAGCAACAATATCAACCAACCACCCCCACCCCAAAGCTCCCAGAGACTAAACCACCAAGCAGAGTACACATGAGGCTCCTGCTGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| 3UTR CCA 90 bp | CCTTTGCTACATATCCAGCAGGAGCCTCATGTGTACTCTGCTTGGTaGTTTAGTCTCTGGGAGCTTTGGGGTGGGGGTGGTTGGTTGATA | + |
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Preference number: 1 (lower is better) Translates to: PLLHIQQEPHVYSAW*FSLWELWGGGGWLI Trigger: TATCAACCAACCACCCCCACCCCAAAGCTCCCAGAGACTAAACCACCAAGCAGAGTACACATGAGGCTCCTGCTGGATATGTAGCAAAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| 3UTR CCA 90 bp | AATCCTTTGCTACATATCCAGCAGGAGCCTCATGTGTACTCTGCTTaGTGGTTTAGTCTCTGGGAGCTTTGGGGTGGGGGTGGTTGGTTG | + |
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Preference number: 1 (lower is better) Translates to: NPLLHIQQEPHVYSA*WFSLWELWGGGGWL Trigger: CAACCAACCACCCCCACCCCAAAGCTCCCAGAGACTAAACCACCAAGCAGAGTACACATGAGGCTCCTGCTGGATATGTAGCAAAGGATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| 3UTR TCA 90 bp | CTTGGTGGTTTAGTCTCTGGGAGCTTTGGGGTGGGGGTGGTTGGTTaGTATTGTTGCTCTTCCTATGTGGTTGCAAATCCCTTCAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: LGGLVSGSFGVGVVG*YCCSSYVVANPFSS Trigger: GGAGCTGAAGGGATTTGCAACCACATAGGAAGAGCAACAATATCAACCAACCACCCCCACCCCAAAGCTCCCAGAGACTAAACCACCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| 3UTR GCA 90 bp | GACCAAAGAGCTCCCCTCCCATTGATACCAGGTAAGGCAATCCTTTaGTACATATCCAGCAGGAGCCTCATGTGTACTCTGCTTGGTGGT | + |
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Preference number: 1 (lower is better) Translates to: DQRAPLPLIPGKAIL*YISSRSLMCTLLGG Trigger: ACCACCAAGCAGAGTACACATGAGGCTCCTGCTGGATATGTAGCAAAGGATTGCCTTACCTGGTATCAATGGGAGGGGAGCTCTTTGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| 3UTR GCA 90 bp | TCAGCTCCTTCAGTCCTTGCTCTAACTCCTTCATTGGAGTCCCCGTaGTCAGTCCAATGTTGGCTGCATCCATCCACATCTGTATTTGTC | + |
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Preference number: 1 (lower is better) Translates to: SAPSVLALTPSLESP*SVQCWLHPSTSVFV Trigger: GACAAATACAGATGTGGATGGATGCAGCCAACATTGGACTGAGCACGGGGACTCCAATGAAGGAGTTAGAGCAAGGACTGAAGGAGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| 3UTR CCA 90 bp | CTTGCTCTAACTCCTTCATTGGAGTCCCCGTGCTCAGTCCAATGTTaGCTGCATCCATCCACATCTGTATTTGTCAGGCTCTGGAAGAGT | + |
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Preference number: 1 (lower is better) Translates to: LALTPSLESPCSVQC*LHPSTSVFVRLWKS Trigger: ACTCTTCCAGAGCCTGACAAATACAGATGTGGATGGATGCAGCCAACATTGGACTGAGCACGGGGACTCCAATGAAGGAGTTAGAGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| 3UTR CCA 90 bp | GCTTTGGGGTGGGGGTGGTTGGTTGATATTGTTGCTCTTCCTATGTaGTTGCAAATCCCTTCAGCTCCTTCAGTCCTTGCTCTAACTCCT | + |
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Preference number: 1 (lower is better) Translates to: ALGWGWLVDIVALPM*LQIPSAPSVLALTP Trigger: AGGAGTTAGAGCAAGGACTGAAGGAGCTGAAGGGATTTGCAACCACATAGGAAGAGCAACAATATCAACCAACCACCCCCACCCCAAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| 3UTR CCA 90 bp | TCTGCTTGGTGGTTTAGTCTCTGGGAGCTTTGGGGTGGGGGTGGTTaGTTGATATTGTTGCTCTTCCTATGTGGTTGCAAATCCCTTCAG | + |
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Preference number: 1 (lower is better) Translates to: SAWWFSLWELWGGGG*LILLLFLCGCKSLQ Trigger: CTGAAGGGATTTGCAACCACATAGGAAGAGCAACAATATCAACCAACCACCCCCACCCCAAAGCTCCCAGAGACTAAACCACCAAGCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| 3UTR GCA 90 bp | CTATCAGAGAATTCTCGCAGCTATGGCCATTCAAAATGCCAGCACTaGTGTGGTCCCTGCAGTTCTCACCATGATTCCTATACTTCTCAC | + |
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Preference number: 1 (lower is better) Translates to: LSENSRSYGHSKCQH*CGPCSSHHDSYTSH Trigger: GTGAGAAGTATAGGAATCATGGTGAGAACTGCAGGGACCACAGCAGTGCTGGCATTTTGAATGGCCATAGCTGCGAGAATTCTCTGATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211952.3 |
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| 3UTR TCA 90 bp | CCATTCAAAATGCCAGCACTGCTGTGGTCCCTGCAGTTCTCACCATaGTTCCTATACTTCTCACCACAATTAGAGCATGAAAACCTTCTT | + |
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Preference number: 1 (lower is better) Translates to: PFKMPALLWSLQFSP*FLYFSPQLEHENLL Trigger: AAGAAGGTTTTCATGCTCTAATTGTGGTGAGAAGTATAGGAATCATGGTGAGAACTGCAGGGACCACAGCAGTGCTGGCATTTTGAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211952.3 |
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| 3UTR TCA 90 bp | GCAGTTCTCACCATGATTCCTATACTTCTCACCACAATTAGAGCATaGAAACCTTCTTTAGTGGTAGCTGCATACCTACACTCAGCCTGT | + |
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Preference number: 1 (lower is better) Translates to: AVLTMIPILLTTIRA*KPSLVVAAYLHSAC Trigger: ACAGGCTGAGTGTAGGTATGCAGCTACCACTAAAGAAGGTTTTCATGCTCTAATTGTGGTGAGAAGTATAGGAATCATGGTGAGAACTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211952.3 |
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| 3UTR GCA 90 bp | TCTGGGAAAGAACAAAAGCAAAGCAGGTCCTATCCAGATTCAGGGTaGACTGACCAGATTGGGCTCTATAGCTATAATCTGAAATCTAAC | + |
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Preference number: 1 (lower is better) Translates to: SGKEQKQSRSYPDSG*TDQIGLYSYNLKSN Trigger: GTTAGATTTCAGATTATAGCTATAGAGCCCAATCTGGTCAGTGCACCCTGAATCTGGATAGGACCTGCTTTGCTTTTGTTCTTTCCCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211952.3 |
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| 3UTR GCA 90 bp | ATCAAAGAGGGAAGTGATTGTCTTCTGTACACAGTTGGGCAAGCTTaGAGATTACATTTTCCAGGTGTGCATAACCACTTACTTTTACAT | + |
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Preference number: 1 (lower is better) Translates to: IKEGSDCLLYTVGQA*RLHFPGVHNHLLLH Trigger: ATGTAAAAGTAAGTGGTTATGCACACCTGGAAAATGTAATCTGCAAGCTTGCCCAACTGTGTACAGAAGACAATCACTTCCCTCTTTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211952.3 |
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| 3UTR-3UTR CCA 90 bp | CCCTCAACAAGCTCCCTATTTCCTCCCCTAGCCCCTGCCTCAATGAGGGTGCTCAGTCTCTGGGAGCTTTaGGGTGGGGGTGGTTGGTTG | + |
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Preference number: 2 (lower is better) Translates to: PSTSSLFPPLAPASMRVLSLWEL*GGGGWL Trigger: CAACCAACCACCCCCACCCCAAAGCTCCCAGAGACT...GAGCACCCTCATTGAGGCAGGGGCTAGGGGAGGAAATAGGGAGCTTGTTGAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTCAACAAGCTCCCTATTTCCTCCCCTAGCCCCTGCCTCAATGAGGGTGCTCGGTAAGGCAATCCTTTaGTACATATCCAGCAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: PSTSSLFPPLAPASMRVLGKAIL*YISSRS Trigger: GCTCCTGCTGGATATGTAGCAAAGGATTGCCTTACC...GAGCACCCTCATTGAGGCAGGGGCTAGGGGAGGAAATAGGGAGCTTGTTGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| 3UTR CAA 90 bp | CCTTGCTCTAACTCCTTCATTGGAGTCCCCGTGCTCAGTCCAATGTaGGCTGCATCCATCCACATCTGTATTTGTCAGGCTCTGGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: PCSNSFIGVPVLSPM*AASIHICICQALEE Trigger: CTCTTCCAGAGCCTGACAAATACAGATGTGGATGGATGCAGCCAACATTGGACTGAGCACGGGGACTCCAATGAAGGAGTTAGAGCAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| 3UTR CAA 90 bp | TTGCAAATCCCTTCAGCTCCTTCAGTCCTTGCTCTAACTCCTTCATaGGAGTCCCCGTGCTCAGTCCAATGTTGGCTGCATCCATCCACA | + |
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Preference number: 2 (lower is better) Translates to: LQIPSAPSVLALTPS*ESPCSVQCWLHPST Trigger: TGTGGATGGATGCAGCCAACATTGGACTGAGCACGGGGACTCCAATGAAGGAGTTAGAGCAAGGACTGAAGGAGCTGAAGGGATTTGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| 3UTR CAA 90 bp | GCTTGGTGGTTTAGTCTCTGGGAGCTTTGGGGTGGGGGTGGTTGGTaGATATTGTTGCTCTTCCTATGTGGTTGCAAATCCCTTCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: AWWFSLWELWGGGGW*ILLLFLCGCKSLQL Trigger: GAGCTGAAGGGATTTGCAACCACATAGGAAGAGCAACAATATCAACCAACCACCCCCACCCCAAAGCTCCCAGAGACTAAACCACCAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| 3UTR CAA 90 bp | TTTAGTCTCTGGGAGCTTTGGGGTGGGGGTGGTTGGTTGATATTGTaGCTCTTCCTATGTGGTTGCAAATCCCTTCAGCTCCTTCAGTCC | + |
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Preference number: 2 (lower is better) Translates to: FSLWELWGGGGWLIL*LFLCGCKSLQLLQS Trigger: GGACTGAAGGAGCTGAAGGGATTTGCAACCACATAGGAAGAGCAACAATATCAACCAACCACCCCCACCCCAAAGCTCCCAGAGACTAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| 3UTR CAA 90 bp | TGGTTTAGTCTCTGGGAGCTTTGGGGTGGGGGTGGTTGGTTGATATaGTTGCTCTTCCTATGTGGTTGCAAATCCCTTCAGCTCCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: WFSLWELWGGGGWLI*LLFLCGCKSLQLLQ Trigger: CTGAAGGAGCTGAAGGGATTTGCAACCACATAGGAAGAGCAACAATATCAACCAACCACCCCCACCCCAAAGCTCCCAGAGACTAAACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGAGCTTTGGGGTGGGGGTGGTTGGTTGATATTGTTGCTCTTCCTATGTGGTTGCTCAGTCCAATGTTaGCTGCATCCATCCACATCT | + |
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Preference number: 2 (lower is better) Translates to: WELWGGGGWLILLLFLCGCSVQC*LHPSTS Trigger: AGATGTGGATGGATGCAGCCAACATTGGACTGAGCA...ACCACATAGGAAGAGCAACAATATCAACCAACCACCCCCACCCCAAAGCTCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| 3UTR CAA 90 bp | TTGGGGTGGGGGTGGTTGGTTGATATTGTTGCTCTTCCTATGTGGTaGCAAATCCCTTCAGCTCCTTCAGTCCTTGCTCTAACTCCTTCA | + |
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Preference number: 2 (lower is better) Translates to: LGWGWLVDIVALPMW*QIPSAPSVLALTPS Trigger: TGAAGGAGTTAGAGCAAGGACTGAAGGAGCTGAAGGGATTTGCAACCACATAGGAAGAGCAACAATATCAACCAACCACCCCCACCCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGCTTTGGGGTGGGGGTGGTTGGTTGATATTGTTGCTCTTCCTATGTGGTTGACAGTTGGGCAAGCTTaGAGATTACATTTTCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: GALGWGWLVDIVALPMWLTVGQA*RLHFPG Trigger: ACCTGGAAAATGTAATCTGCAAGCTTGCCCAACTGT...CAACCACATAGGAAGAGCAACAATATCAACCAACCACCCCCACCCCAAAGCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000211952.3 |
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| 3UTR-3UTR TCA 90 bp | GTCCTTGCTCTAACTCCTTCATTGGAGTCCCCGTGCTCAGTCCAATGTTGGCTGCCACTTACTTTTACATaGCGAAAGATCAGCATTTAC | + |
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Preference number: 2 (lower is better) Translates to: VLALTPSLESPCSVQCWLPLTFT*RKISIY Trigger: GTAAATGCTGATCTTTCGTCATGTAAAAGTAAGTGG...CAGCCAACATTGGACTGAGCACGGGGACTCCAATGAAGGAGTTAGAGCAAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211952.3 |
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| 3UTR-3UTR TCA 90 bp | TGGGGGTGGTTGGTTGATATTGTTGCTCTTCCTATGTGGTTGCAAATCCCTTCATTCTGTGAAGTGTTATaGTGCTTCAGTGCCTGGACT | + |
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Preference number: 2 (lower is better) Translates to: WGWLVDIVALPMWLQIPSFCEVL*CFSAWT Trigger: AGTCCAGGCACTGAAGCATCATAACACTTCACAGAA...TGAAGGGATTTGCAACCACATAGGAAGAGCAACAATATCAACCAACCACCCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211952.3 |
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| 3UTR-3UTR GCA 90 bp | CCCCGTGCTCAGTCCAATGTTGGCTGCATCCATCCACATCTGTATTTGTCAGGCTACATTTTCCAGGTGTaGATAACCACTTACTTTTAC | + |
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Preference number: 2 (lower is better) Translates to: PRAQSNVGCIHPHLYLSGYIFQV*ITTYFY Trigger: GTAAAAGTAAGTGGTTATGCACACCTGGAAAATGTA...GCCTGACAAATACAGATGTGGATGGATGCAGCCAACATTGGACTGAGCACGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000211952.3 |
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| 3UTR-3UTR GCA 90 bp | AGTCTCTGGGAGCTTTGGGGTGGGGGTGGTTGGTTGATATTGTTGCTCTTCCTAGGGCATTGGTTATCATaGTTCATTATTTTAACCATG | + |
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Preference number: 2 (lower is better) Translates to: SLWELWGGGGWLILLLFLGHWLS*FIILTM Trigger: CATGGTTAAAATAATGAAGCATGATAACCAATGCCC...TAGGAAGAGCAACAATATCAACCAACCACCCCCACCCCAAAGCTCCCAGAGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000211952.3 |
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| 3UTR CAA 90 bp | CCACATACTCAATCAAAGAGGGAAGTGATTGTCTTCTGTACACAGTaGGGCAAGCTTGCAGATTACATTTTCCAGGTGTGCATAACCACT | + |
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Preference number: 2 (lower is better) Translates to: PHTQSKREVIVFCTQ*GKLADYIFQVCITT Trigger: AGTGGTTATGCACACCTGGAAAATGTAATCTGCAAGCTTGCCCAACTGTGTACAGAAGACAATCACTTCCCTCTTTGATTGAGTATGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211952.3 |
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| 3UTR-3UTR GCA 90 bp | TTCCCAGGGGCATTGGTTATCATGCTTCATTATTTTAACCATGTTCTGACAGTAGCTTTGTGCCCTTTCTaGCCCTTTTCATACTGTTGC | + |
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Preference number: 2 (lower is better) Translates to: FPGALVIMLHYFNHVLTVALCPF*PFSYCC Trigger: GCAACAGTATGAAAAGGGGCAGAAAGGGCACAAAGC...TACTGTCAGAACATGGTTAAAATAATGAAGCATGATAACCAATGCCCCTGGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000211952.3 |
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| 3UTR-3UTR CCA 90 bp | TTCCCAGGGGCATTGGTTATCATGCTTCATTATTTTAACCATGTTCTGACAGTATCTTCTGTACACAGTTaGGCAAGCTTGCAGATTACA | + |
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Preference number: 2 (lower is better) Translates to: FPGALVIMLHYFNHVLTVSSVHS*ASLQIT Trigger: TGTAATCTGCAAGCTTGCCCAACTGTGTACAGAAGA...TACTGTCAGAACATGGTTAAAATAATGAAGCATGATAACCAATGCCCCTGGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211952.3 |
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| 3UTR CCA 72 bp | CATATCCAGCAGGAGCCTCATGTGTACTCTGCTTGGTaGTTTAGTCTCTGGGAGCTTTGGGGTGGGGGTGGT | + |
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Preference number: 3 (lower is better) Translates to: HIQQEPHVYSAW*FSLWELWGGGG Trigger: ACCACCCCCACCCCAAAGCTCCCAGAGACTAAACCACCAAGCAGAGTACACATGAGGCTCCTGCTGGATATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| 3UTR-3UTR CAA 90 bp | CCCTCAACAAGCTCCCTATTTCCTCCCCTAGCCCCTGCCTCAATGAGGGTGCTCCATCCACATCTGTATTaGTCAGGCTCTGGAAGAGTC | + |
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Preference number: 3 (lower is better) Translates to: PSTSSLFPPLAPASMRVLHPHLY*SGSGRV Trigger: GACTCTTCCAGAGCCTGACAAATACAGATGTGGATG...GAGCACCCTCATTGAGGCAGGGGCTAGGGGAGGAAATAGGGAGCTTGTTGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| 3UTR CCA 72 bp | CTACATATCCAGCAGGAGCCTCATGTGTACTCTGCTTaGTGGTTTAGTCTCTGGGAGCTTTGGGGTGGGGGT | + |
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Preference number: 3 (lower is better) Translates to: LHIQQEPHVYSA*WFSLWELWGGG Trigger: ACCCCCACCCCAAAGCTCCCAGAGACTAAACCACCAAGCAGAGTACACATGAGGCTCCTGCTGGATATGTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| 3UTR CCA 72 bp | GAGCCTCATGTGTACTCTGCTTGGTGGTTTAGTCTCTaGGAGCTTTGGGGTGGGGGTGGTTGGTTGATATTG | + |
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Preference number: 3 (lower is better) Translates to: EPHVYSAWWFSL*ELWGGGGWLIL Trigger: CAATATCAACCAACCACCCCCACCCCAAAGCTCCCAGAGACTAAACCACCAAGCAGAGTACACATGAGGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| 3UTR GCA 72 bp | TTCAGTGCCTGGACTCTTGGGGCTTTGTGCCCTTTCTaGCCCTTTTCATACTGTTGCGGTTGTGCCATTTGT | + |
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Preference number: 3 (lower is better) Translates to: FSAWTLGALCPF*PFSYCCGCAIC Trigger: ACAAATGGCACAACCGCAACAGTATGAAAAGGGGCAGAAAGGGCACAAAGCCCCAAGAGTCCAGGCACTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211952.3 |
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| 3UTR GCA 72 bp | TCAGTCCTTGCTCTAACTCCTTCATTGGAGTCCCCGTaGTCAGTCCAATGTTGGCTGCATCCATCCACATCT | + |
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Preference number: 3 (lower is better) Translates to: SVLALTPSLESP*SVQCWLHPSTS Trigger: AGATGTGGATGGATGCAGCCAACATTGGACTGAGCACGGGGACTCCAATGAAGGAGTTAGAGCAAGGACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| 3UTR GCA 72 bp | GCTCCCCTCCCATTGATACCAGGTAAGGCAATCCTTTaGTACATATCCAGCAGGAGCCTCATGTGTACTCTG | + |
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Preference number: 3 (lower is better) Translates to: APLPLIPGKAIL*YISSRSLMCTL Trigger: CAGAGTACACATGAGGCTCCTGCTGGATATGTAGCAAAGGATTGCCTTACCTGGTATCAATGGGAGGGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| 3UTR CCA 72 bp | ACTCCTTCATTGGAGTCCCCGTGCTCAGTCCAATGTTaGCTGCATCCATCCACATCTGTATTTGTCAGGCTC | + |
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Preference number: 3 (lower is better) Translates to: TPSLESPCSVQC*LHPSTSVFVRL Trigger: GAGCCTGACAAATACAGATGTGGATGGATGCAGCCAACATTGGACTGAGCACGGGGACTCCAATGAAGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| 3UTR GCA 72 bp | CTATCAGAGAATTCTCGCAGCTATGGCCATTCAAAATaGCAGCACTGCTGTGGTCCCTGCAGTTCTCACCAT | + |
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Preference number: 3 (lower is better) Translates to: LSENSRSYGHSK*QHCCGPCSSHH Trigger: ATGGTGAGAACTGCAGGGACCACAGCAGTGCTGGCATTTTGAATGGCCATAGCTGCGAGAATTCTCTGATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211952.3 |
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| 3UTR GCA 72 bp | TATGTGGTTGCAAATCCCTTCAGCTCCTTCAGTCCTTaGTCTAACTCCTTCATTGGAGTCCCCGTGCTCAGT | + |
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Preference number: 3 (lower is better) Translates to: YVVANPFSSFSP*SNSFIGVPVLS Trigger: ACTGAGCACGGGGACTCCAATGAAGGAGTTAGAGCAAGGACTGAAGGAGCTGAAGGGATTTGCAACCACATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| 3UTR CCA 72 bp | TGGCTGCATCCATCCACATCTGTATTTGTCAGGCTCTaGAAGAGTCTCTCAGGGGACAGCTATACTAGGTTC | + |
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Preference number: 3 (lower is better) Translates to: WLHPSTSVFVRL*KSLSGDSYTRF Trigger: GAACCTAGTATAGCTGTCCCCTGAGAGACTCTTCCAGAGCCTGACAAATACAGATGTGGATGGATGCAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| 3UTR GCA 72 bp | TATGGCCATTCAAAATGCCAGCACTGCTGTGGTCCCTaGAGTTCTCACCATGATTCCTATACTTCTCACCAC | + |
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Preference number: 3 (lower is better) Translates to: YGHSKCQHCCGP*SSHHDSYTSHH Trigger: GTGGTGAGAAGTATAGGAATCATGGTGAGAACTGCAGGGACCACAGCAGTGCTGGCATTTTGAATGGCCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211952.3 |
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| 3UTR GCA 72 bp | AATTCTCGCAGCTATGGCCATTCAAAATGCCAGCACTaGTGTGGTCCCTGCAGTTCTCACCATGATTCCTAT | + |
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Preference number: 3 (lower is better) Translates to: NSRSYGHSKCQH*CGPCSSHHDSY Trigger: ATAGGAATCATGGTGAGAACTGCAGGGACCACAGCAGTGCTGGCATTTTGAATGGCCATAGCTGCGAGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211952.3 |
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| 3UTR CCA 72 bp | TGGGGGTGGTTGGTTGATATTGTTGCTCTTCCTATGTaGTTGCAAATCCCTTCAGCTCCTTCAGTCCTTGCT | + |
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Preference number: 3 (lower is better) Translates to: WGWLVDIVALPM*LQIPSAPSVLA Trigger: AGCAAGGACTGAAGGAGCTGAAGGGATTTGCAACCACATAGGAAGAGCAACAATATCAACCAACCACCCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| 3UTR-3UTR CAA 90 bp | AGTCCAATGTTGGCTGCATCCATCCACATCTGTATTTGTCAGGCTCTGGAAGAGGTCTTCTGTACACAGTaGGGCAAGCTTGCAGATTAC | + |
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Preference number: 3 (lower is better) Translates to: SPMLAASIHICICQALEEVFCTQ*GKLADY Trigger: GTAATCTGCAAGCTTGCCCAACTGTGTACAGAAGAC...CTCTTCCAGAGCCTGACAAATACAGATGTGGATGGATGCAGCCAACATTGGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211952.3 |
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| 3UTR CCA 72 bp | TGTAAGCAAGCTCTTCTTGGCATCAGCAATAGTGTCTaGGTTTGGTGTTTCTCGAGATCTCTTCCTCCTTCT | + |
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Preference number: 3 (lower is better) Translates to: CKQALLGISNSV*VWCFSRSLPPS Trigger: AGAAGGAGGAAGAGATCTCGAGAAACACCAAACCCAGACACTATTGCTGATGCCAAGAAGAGCTTGCTTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211952.3 |
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| 3UTR CCA 72 bp | ATCAAAGCCCACCAACTGCTCTCAGCATGTAGCTTATaGCGGACATTTCAAATATCAGCTACACAGAGAAAC | + |
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Preference number: 3 (lower is better) Translates to: IKAHQLLSACSL*RTFQISATQRN Trigger: GTTTCTCTGTGTAGCTGATATTTGAAATGTCCGCCATAAGCTACATGCTGAGAGCAGTTGGTGGGCTTTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211952.3 |
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| 3UTR CCA 72 bp | TGTAAGCAAGCTCTTCTTGGCATCAGCAATAGTGTCTaGGTTTGGTGTTTCTCGAGATCTCTTCCTCCTTTT | + |
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Preference number: 3 (lower is better) Translates to: CKQALLGISNSV*VWCFSRSLPPF Trigger: AAAAGGAGGAAGAGATCTCGAGAAACACCAAACCCAGACACTATTGCTGATGCCAAGAAGAGCTTGCTTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215727.2 |
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| 3UTR GCA 72 bp | GGAAGTGATTGTCTTCTGTACACAGTTGGGCAAGCTTaGAGATTACATTTTCCAGGTGTGCATAACCACTTA | + |
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Preference number: 3 (lower is better) Translates to: GSDCLLYTVGQA*RLHFPGVHNHL Trigger: TAAGTGGTTATGCACACCTGGAAAATGTAATCTGCAAGCTTGCCCAACTGTGTACAGAAGACAATCACTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211952.3 |
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| 3UTR TCA 72 bp | ATGTCACCATCATCTATCAGTAGATTAGTTTGTTTATaGAGTCAGAGCACCGATCAAAGCCCACCAACTGCT | + |
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Preference number: 3 (lower is better) Translates to: MSPSSISRLVCL*SQSTDQSPPTA Trigger: AGCAGTTGGTGGGCTTTGATCGGTGCTCTGACTTCATAAACAAACTAATCTACTGATAGATGATGGTGACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211952.3 |
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| 3UTR TCA 72 bp | TCTTTAGTGGTAGCTGCATACCTACACTCAGCCTGTTaGATTTGGCATAGGGTATTTGTTAGAAAGTTTGGG | + |
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Preference number: 3 (lower is better) Translates to: SLVVAAYLHSAC*IWHRVFVRKFG Trigger: CCCAAACTTTCTAACAAATACCCTATGCCAAATTCAACAGGCTGAGTGTAGGTATGCAGCTACCACTAAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211952.3 |
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| 3UTR GCA 72 bp | CAGTTGGGCAAGCTTGCAGATTACATTTTCCAGGTGTaGATAACCACTTACTTTTACATGACGAAAGATCAG | + |
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Preference number: 3 (lower is better) Translates to: QLGKLADYIFQV*ITTYFYMTKDQ Trigger: CTGATCTTTCGTCATGTAAAAGTAAGTGGTTATGCACACCTGGAAAATGTAATCTGCAAGCTTGCCCAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211952.3 |
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| 3UTR TCA 72 bp | ACCATGATTCCTATACTTCTCACCACAATTAGAGCATaGAAACCTTCTTTAGTGGTAGCTGCATACCTACAC | + |
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Preference number: 3 (lower is better) Translates to: TMIPILLTTIRA*KPSLVVAAYLH Trigger: GTGTAGGTATGCAGCTACCACTAAAGAAGGTTTTCATGCTCTAATTGTGGTGAGAAGTATAGGAATCATGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211952.3 |
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| 3UTR CAA 72 bp | CCTTCAGCTCCTTCAGTCCTTGCTCTAACTCCTTCATaGGAGTCCCCGTGCTCAGTCCAATGTTGGCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: PSAPSVLALTPS*ESPCSVQCWLH Trigger: ATGCAGCCAACATTGGACTGAGCACGGGGACTCCAATGAAGGAGTTAGAGCAAGGACTGAAGGAGCTGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| CDS-3UTR TCA 90 bp | CCCCGTGCTCAGTCCAATGTTGGCTGCATCCATCCACATCTGTATTTGTCAGGCACCCCACATAGGAGATaGGGTTTCTTTGGGACACAA | + |
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Preference number: 4 (lower is better) Translates to: PRAQSNVGCIHPHLYLSGTPHRR*GFFGTQ Trigger: TTGTGTCCCAAAGAAACCTCATCTCCTATGTGGGGT...GCCTGACAAATACAGATGTGGATGGATGCAGCCAACATTGGACTGAGCACGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| 3UTR CAA 72 bp | CAGTCCAATGTTGGCTGCATCCATCCACATCTGTATTaGTCAGGCTCTGGAAGAGTCTCTCAGGGGACAGCT | + |
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Preference number: 4 (lower is better) Translates to: QSNVGCIHPHLY*SGSGRVSQGTA Trigger: AGCTGTCCCCTGAGAGACTCTTCCAGAGCCTGACAAATACAGATGTGGATGGATGCAGCCAACATTGGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| CDS-3UTR TCA 90 bp | GTCCTTGCTCTAACTCCTTCATTGGAGTCCCCGTGCTCAGTCCAATGTTGGCTGCTATTGTTGAGCCTATaGGTCCCATGGCATAGACAA | + |
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Preference number: 4 (lower is better) Translates to: VLALTPSLESPCSVQCWLLLLSL*VPWHRQ Trigger: TTGTCTATGCCATGGGACTCATAGGCTCAACAATAG...CAGCCAACATTGGACTGAGCACGGGGACTCCAATGAAGGAGTTAGAGCAAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| 3UTR CAA 72 bp | AACTCCTTCATTGGAGTCCCCGTGCTCAGTCCAATGTaGGCTGCATCCATCCACATCTGTATTTGTCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: NSFIGVPVLSPM*AASIHICICQA Trigger: AGCCTGACAAATACAGATGTGGATGGATGCAGCCAACATTGGACTGAGCACGGGGACTCCAATGAAGGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| CDS-3UTR CCA 90 bp | GTTGCAAATCCCTTCAGCTCCTTCAGTCCTTGCTCTAACTCCTTCATTGGAGTCGAAGCTACATTCTCCTaGGCCAGGGAACTAGCTGTA | + |
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Preference number: 4 (lower is better) Translates to: VANPFSSFSPCSNSFIGVEATFS*ARELAV Trigger: TACAGCTAGTTCCCTGGCCCAGGAGAATGTAGCTTC...GACTCCAATGAAGGAGTTAGAGCAAGGACTGAAGGAGCTGAAGGGATTTGCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| CDS-3UTR CCA 90 bp | CATCTGTATTTGTCAGGCTCTGGAAGAGTCTCTCAGGGGACAGCTATACTAGGTGAAGCTACATTCTCCTaGGCCAGGGAACTAGCTGTA | + |
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Preference number: 4 (lower is better) Translates to: HLYLSGSGRVSQGTAILGEATFS*ARELAV Trigger: TACAGCTAGTTCCCTGGCCCAGGAGAATGTAGCTTC...ACCTAGTATAGCTGTCCCCTGAGAGACTCTTCCAGAGCCTGACAAATACAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| 3UTR CAA 72 bp | TTTAGTCTCTGGGAGCTTTGGGGTGGGGGTGGTTGGTaGATATTGTTGCTCTTCCTATGTGGTTGCAAATCC | + |
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Preference number: 4 (lower is better) Translates to: FSLWELWGGGGW*ILLLFLCGCKS Trigger: GGATTTGCAACCACATAGGAAGAGCAACAATATCAACCAACCACCCCCACCCCAAAGCTCCCAGAGACTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| 3UTR CAA 72 bp | ATAGAGTCTCCACAGGACCAAAGAGCTCCCCTCCCATaGATACCAGGTAAGGCAATCCTTTGCTACATATCC | + |
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Preference number: 4 (lower is better) Translates to: IESPQDQRAPLP*IPGKAILCYIS Trigger: GGATATGTAGCAAAGGATTGCCTTACCTGGTATCAATGGGAGGGGAGCTCTTTGGTCCTGTGGAGACTCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| CDS-3UTR TCA 90 bp | GCTCTTCCTATGTGGTTGCAAATCCCTTCAGCTCCTTCAGTCCTTGCTCTAACTACCCCACATAGGAGATaGGGTTTCTTTGGGACACAA | + |
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Preference number: 4 (lower is better) Translates to: ALPMWLQIPSAPSVLALTTPHRR*GFFGTQ Trigger: TTGTGTCCCAAAGAAACCTCATCTCCTATGTGGGGT...AGTTAGAGCAAGGACTGAAGGAGCTGAAGGGATTTGCAACCACATAGGAAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| 3UTR CAA 72 bp | GGGTGGTTGGTTGATATTGTTGCTCTTCCTATGTGGTaGCAAATCCCTTCAGCTCCTTCAGTCCTTGCTCTA | + |
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Preference number: 4 (lower is better) Translates to: GWLVDIVALPMW*QIPSAPSVLAL Trigger: TAGAGCAAGGACTGAAGGAGCTGAAGGGATTTGCAACCACATAGGAAGAGCAACAATATCAACCAACCACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| CDS-3UTR TCA 90 bp | GGCATCAGCAATAGTGTCTGGGTTTGGTGTTTCTCGAGATCTCTTCCTCCTTTTCTATTGTTGAGCCTATaGGTCCCATGGCATAGACAA | + |
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Preference number: 4 (lower is better) Translates to: GISNSVWVWCFSRSLPPFLLLSL*VPWHRQ Trigger: TTGTCTATGCCATGGGACTCATAGGCTCAACAATAG...AAAAGGAGGAAGAGATCTCGAGAAACACCAAACCCAGACACTATTGCTGATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215727.2 |
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| 3UTR CAA 72 bp | CAATCAAAGAGGGAAGTGATTGTCTTCTGTACACAGTaGGGCAAGCTTGCAGATTACATTTTCCAGGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: QSKREVIVFCTQ*GKLADYIFQVC Trigger: GCACACCTGGAAAATGTAATCTGCAAGCTTGCCCAACTGTGTACAGAAGACAATCACTTCCCTCTTTGATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211952.3 |
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| CDS-3UTR CAA 90 bp | GTGCTCAGTCCAATGTTGGCTGCATCCATCCACATCTGTATTTGTCAGGCTCTGCTTCTCCTCAGTGTTTaGTCCAGTGCGGTCTTCACC | + |
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Preference number: 5 (lower is better) Translates to: VLSPMLAASIHICICQALLLLSV*SSAVFT Trigger: GGTGAAGACCGCACTGGACAAAACACTGAGGAGAAG...CAGAGCCTGACAAATACAGATGTGGATGGATGCAGCCAACATTGGACTGAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| CDS-3UTR CAA 90 bp | CCTCATGTGTACTCTGCTTGGTGGTTTAGTCTCTGGGAGCTTTGGGGTGGGGGTCTTTGGGACACAAAGTaGATGAGCATTTTAGGGGTA | + |
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Preference number: 5 (lower is better) Translates to: PHVYSAWWFSLWELWGGGLWDTK*MSILGV Trigger: TACCCCTAAAATGCTCATCAACTTTGTGTCCCAAAG...ACCCCCACCCCAAAGCTCCCAGAGACTAAACCACCAAGCAGAGTACACATGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| CDS-3UTR CAA 90 bp | TCCACATCTGTATTTGTCAGGCTCTGGAAGAGTCTCTCAGGGGACAGCTATACTGGAGATGAGGTTTCTTaGGGACACAAAGTTGATGAG | + |
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Preference number: 5 (lower is better) Translates to: STSVFVRLWKSLSGDSYTGDEVS*GHKVDE Trigger: CTCATCAACTTTGTGTCCCAAAGAAACCTCATCTCC...AGTATAGCTGTCCCCTGAGAGACTCTTCCAGAGCCTGACAAATACAGATGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| CDS-3UTR CAA 90 bp | TGGGGGTGGTTGGTTGATATTGTTGCTCTTCCTATGTGGTTGCAAATCCCTTCAGGAGATGAGGTTTCTTaGGGACACAAAGTTGATGAG | + |
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Preference number: 5 (lower is better) Translates to: WGWLVDIVALPMWLQIPSGDEVS*GHKVDE Trigger: CTCATCAACTTTGTGTCCCAAAGAAACCTCATCTCC...TGAAGGGATTTGCAACCACATAGGAAGAGCAACAATATCAACCAACCACCCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000211952.3 ENSMUST00000215727.2 |
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| CDS-3UTR CAA 90 bp | GGCATCAGCAATAGTGTCTGGGTTTGGTGTTTCTCGAGATCTCTTCCTCCTTTTCTTTGGGACACAAAGTaGATGAGCATTTTAGGGGTA | + |
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Preference number: 5 (lower is better) Translates to: GISNSVWVWCFSRSLPPFLWDTK*MSILGV Trigger: TACCCCTAAAATGCTCATCAACTTTGTGTCCCAAAG...AAAAGGAGGAAGAGATCTCGAGAAACACCAAACCCAGACACTATTGCTGATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215727.2 |
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