Pregenerated sensors for OLFR16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037924Ensembl transcript IDs: ENSMUST00000038432.7, ENSMUST00000215254.2
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCTTCTCTTCTGTGCATGAAGAAGGGAATGAAAACGGCTGTCCCTaGAGCTCATTGTGCATGGACTCCTTCCTACAATGTTGTAATTGT | + |
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Preference number: 1 (lower is better) Translates to: AFSSVHEEGNENGCP*SSLCMDSFLQCCNC Trigger: ACAATTACAACATTGTAGGAAGGAGTCCATGCACAATGAGCTGCAGGGACAGCCGTTTTCATTCCCTTCTTCATGCACAGAAGAGAAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215254.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGTGCATGAAGAAGGGAATGAAAACGGCTGTCCCTGCAGCTCATTGTGCATGGTCTCTTCTCTACATTaGGACCAGATAAAGGACTTG | + |
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Preference number: 2 (lower is better) Translates to: SVHEEGNENGCPCSSLCMVSSLH*DQIKDL Trigger: CAAGTCCTTTATCTGGTCTCAATGTAGAGAAGAGAC...CATGCACAATGAGCTGCAGGGACAGCCGTTTTCATTCCCTTCTTCATGCACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215254.2 |
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| 3UTR CAA 90 bp | TCTGTGCATGAAGAAGGGAATGAAAACGGCTGTCCCTGCAGCTCATaGTGCATGGACTCCTTCCTACAATGTTGTAATTGTCTCTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: SVHEEGNENGCPCSS*CMDSFLQCCNCLFS Trigger: AGAGAAGAGACAATTACAACATTGTAGGAAGGAGTCCATGCACAATGAGCTGCAGGGACAGCCGTTTTCATTCCCTTCTTCATGCACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215254.2 |
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| 3UTR-3UTR TCA 90 bp | TGTAATTGTCTCTTCTCTACATTGAGACCAGATAAAGGACTTGACCGAGCGTCTAATGATTCTTGGATCTaGGATCCAAACATTAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: CNCLFSTLRPDKGLDRASNDSWI*DPNIRA Trigger: GGCTCTAATGTTTGGATCTCAGATCCAAGAATCATT...AGACGCTCGGTCAAGTCCTTTATCTGGTCTCAATGTAGAGAAGAGACAATTACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215254.2 |
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| 3UTR GCA 72 bp | TCTGTGCATGAAGAAGGGAATGAAAACGGCTGTCCCTaGAGCTCATTGTGCATGGACTCCTTCCTACAATGT | + |
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Preference number: 3 (lower is better) Translates to: SVHEEGNENGCP*SSLCMDSFLQC Trigger: ACATTGTAGGAAGGAGTCCATGCACAATGAGCTGCAGGGACAGCCGTTTTCATTCCCTTCTTCATGCACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215254.2 |
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| 3UTR GCA 72 bp | GAAGGGAATGAAAACGGCTGTCCCTGCAGCTCATTGTaGATGGACTCCTTCCTACAATGTTGTAATTGTCTC | + |
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Preference number: 3 (lower is better) Translates to: EGNENGCPCSSL*MDSFLQCCNCL Trigger: GAGACAATTACAACATTGTAGGAAGGAGTCCATGCACAATGAGCTGCAGGGACAGCCGTTTTCATTCCCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215254.2 |
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| CDS-3UTR GCA 90 bp | TCTGTGCATGAAGAAGGGAATGAAAACGGCTGTCCCTGCAGCTCATTGTGCATGATGTCACAGAAAAAGTaGTCCACCACCGTGCCACAA | + |
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Preference number: 4 (lower is better) Translates to: SVHEEGNENGCPCSSLCMMSQKK*STTVPQ Trigger: TTGTGGCACGGTGGTGGAGCACTTTTTCTGTGACAT...CATGCACAATGAGCTGCAGGGACAGCCGTTTTCATTCCCTTCTTCATGCACAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215254.2 |
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| CDS-3UTR CCA 90 bp | TCTGTGCATGAAGAAGGGAATGAAAACGGCTGTCCCTGCAGCTCATTGTGCATGGATGCTTTCCAAAGCTaGAGAATCCCAGGAAGACGA | + |
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Preference number: 4 (lower is better) Translates to: SVHEEGNENGCPCSSLCMDAFQS*RIPGRR Trigger: TCGTCTTCCTGGGATTCTCCAGCTTTGGAAAGCATC...CATGCACAATGAGCTGCAGGGACAGCCGTTTTCATTCCCTTCTTCATGCACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215254.2 |
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| CDS-3UTR TCA 90 bp | TGTAATTGTCTCTTCTCTACATTGAGACCAGATAAAGGACTTGACCGAGCGTCTGCATCCGTGGGACAATaGCCAGTGTGTACACAGTCT | + |
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Preference number: 4 (lower is better) Translates to: CNCLFSTLRPDKGLDRASASVGQ*PVCTQS Trigger: AGACTGTGTACACACTGGTCATTGTCCCACGGATGC...AGACGCTCGGTCAAGTCCTTTATCTGGTCTCAATGTAGAGAAGAGACAATTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215254.2 |
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| CDS-3UTR GCA 90 bp | TGTTGTAATTGTCTCTTCTCTACATTGAGACCAGATAAAGGACTTGACCGAGCGAGTGCTCCACCACCGTaGCACAAAAGGGCAAATGGA | + |
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Preference number: 4 (lower is better) Translates to: CCNCLFSTLRPDKGLDRASAPPP*HKRANG Trigger: TCCATTTGCCCTTTTGTGGCACGGTGGTGGAGCACT...CGCTCGGTCAAGTCCTTTATCTGGTCTCAATGTAGAGAAGAGACAATTACAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215254.2 |
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| CDS-3UTR GCA 90 bp | TCCTTCCTACAATGTTGTAATTGTCTCTTCTCTACATTGAGACCAGATAAAGGATGGCACATGAAGAACTaGCATAACCAGGCCAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SFLQCCNCLFSTLRPDKGWHMKN*HNQASA Trigger: GGCACTGGCCTGGTTATGGCAGTTCTTCATGTGCCA...TCCTTTATCTGGTCTCAATGTAGAGAAGAGACAATTACAACATTGTAGGAAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215254.2 |
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| CDS-3UTR CCA 90 bp | TTGAGACCAGATAAAGGACTTGACCGAGCGTCTAAAAAGGTAGAATCCAAAGATAGGGCAAATGGAACATaGCTGGCACATGAAGAACTG | + |
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Preference number: 4 (lower is better) Translates to: LRPDKGLDRASKKVESKDRANGT*LAHEEL Trigger: CAGTTCTTCATGTGCCAGCCATGTTCCATTTGCCCT...ATCTTTGGATTCTACCTTTTTAGACGCTCGGTCAAGTCCTTTATCTGGTCTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215254.2 |
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| CDS-3UTR GCA 90 bp | TTGAGACCAGATAAAGGACTTGACCGAGCGTCTAAAAAGGTAGAATCCAAAGATAAAGAACATTTGGGTTaGGCAGCCTGCCAAGGATAT | + |
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Preference number: 4 (lower is better) Translates to: LRPDKGLDRASKKVESKDKEHLG*AACQGY Trigger: ATATCCTTGGCAGGCTGCGCAACCCAAATGTTCTTT...ATCTTTGGATTCTACCTTTTTAGACGCTCGGTCAAGTCCTTTATCTGGTCTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215254.2 |
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| CDS-3UTR CCA 90 bp | AATTGTCTCTTCTCTACATTGAGACCAGATAAAGGACTTGACCGAGCGTCTAAACAAATGGAACATGGCTaGCACATGAAGAACTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: NCLFSTLRPDKGLDRASKQMEHG*HMKNCH Trigger: ATGGCAGTTCTTCATGTGCCAGCCATGTTCCATTTG...TTTAGACGCTCGGTCAAGTCCTTTATCTGGTCTCAATGTAGAGAAGAGACAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215254.2 |
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| CDS-3UTR TCA 90 bp | TCCTTCCTACAATGTTGTAATTGTCTCTTCTCTACATTGAGACCAGATAAAGGAACAAAGAGGGTTATCTaGTGCTTTCCAAAGCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: SFLQCCNCLFSTLRPDKGTKRVI*CFPKLE Trigger: CTCCAGCTTTGGAAAGCATCAGATAACCCTCTTTGT...TCCTTTATCTGGTCTCAATGTAGAGAAGAGACAATTACAACATTGTAGGAAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215254.2 |
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| CDS TCA 90 bp | TCCACCACCGTGCCACAAAAGGGCAAATGGAACATGGCTGGCACATaGAGAACTGCCATAACCAGGCCAGTGCCTAAAGACCCACAAACC | + |
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Preference number: 5 (lower is better) Translates to: STTVPQKGKWNMAGT*RTAITRPVPKDPQT Trigger: GGTTTGTGGGTCTTTAGGCACTGGCCTGGTTATGGCAGTTCTTCATGTGCCAGCCATGTTCCATTTGCCCTTTTGTGGCACGGTGGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038432.7 ENSMUST00000215254.2 |
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| CDS-3UTR CAA 90 bp | TGTAATTGTCTCTTCTCTACATTGAGACCAGATAAAGGACTTGACCGAGCGTCTAAAAGAACATTTGGGTaGCGCAGCCTGCCAAGGATA | + |
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Preference number: 5 (lower is better) Translates to: CNCLFSTLRPDKGLDRASKRTFG*RSLPRI Trigger: TATCCTTGGCAGGCTGCGCAACCCAAATGTTCTTTT...AGACGCTCGGTCAAGTCCTTTATCTGGTCTCAATGTAGAGAAGAGACAATTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215254.2 |
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| CDS-3UTR CAA 90 bp | TCCTTCCTACAATGTTGTAATTGTCTCTTCTCTACATTGAGACCAGATAAAGGAGTGAGCAGAAAGCAGTaGTTGGTGGCCAAGGTGACA | + |
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Preference number: 5 (lower is better) Translates to: SFLQCCNCLFSTLRPDKGVSRKQ*LVAKVT Trigger: TGTCACCTTGGCCACCAACAACTGCTTTCTGCTCAC...TCCTTTATCTGGTCTCAATGTAGAGAAGAGACAATTACAACATTGTAGGAAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215254.2 |
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| CDS-3UTR CAA 90 bp | AATTGTCTCTTCTCTACATTGAGACCAGATAAAGGACTTGACCGAGCGTCTAAAGTCACTATAATGATGTaGCCAGCCAGAGTTAAAATG | + |
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Preference number: 5 (lower is better) Translates to: NCLFSTLRPDKGLDRASKVTIMM*PARVKM Trigger: CATTTTAACTCTGGCTGGCAACATCATTATAGTGAC...TTTAGACGCTCGGTCAAGTCCTTTATCTGGTCTCAATGTAGAGAAGAGACAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215254.2 |
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| CDS-3UTR CAA 90 bp | TTGAGACCAGATAAAGGACTTGACCGAGCGTCTAAAAAGGTAGAATCCAAAGATAAGGCACACATTCCCTaGCTCATGATGATTGTATAT | + |
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Preference number: 5 (lower is better) Translates to: LRPDKGLDRASKKVESKDKAHIP*LMMIVY Trigger: ATATACAATCATCATGAGCAAGGGAATGTGTGCCTT...ATCTTTGGATTCTACCTTTTTAGACGCTCGGTCAAGTCCTTTATCTGGTCTCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215254.2 |
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| CDS CCA 72 bp | CACCACCGTGCCACAAAAGGGCAAATGGAACATGGCTaGCACATGAAGAACTGCCATAACCAGGCCAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: HHRATKGQMEHG*HMKNCHNQASA Trigger: GGCACTGGCCTGGTTATGGCAGTTCTTCATGTGCCAGCCATGTTCCATTTGCCCTTTTGTGGCACGGTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038432.7 ENSMUST00000215254.2 |
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