Pregenerated sensors for OLFR1565 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000089859Ensembl transcript IDs: ENSMUST00000077123.4, ENSMUST00000214797.3
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTaGCTCCCAAGTGCTGGGATTAAAGGTGCGCCACCTCCCGGCCTT | + |
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Preference number: 1 (lower is better) Translates to: LCRPGWPRTQKSACL*LPSAGIKGAPPPGL Trigger: AAGGCCGGGAGGTGGCGCACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214797.3 |
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| 3UTR GCA 90 bp | AACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTaGCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGCGCCACCTCCC | + |
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Preference number: 1 (lower is better) Translates to: NSLCRPGWPRTQKSA*LCLPSAGIKGAPPP Trigger: GGGAGGTGGCGCACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214797.3 |
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| 3UTR GCA 90 bp | ATGACCTTGAGGTCATCCAGTTTCCAGAGGCTGGGATCACAGGCATaGACCAATGCTGAGTTTATGGGTGCTGGCCACCGATCCCATGCT | + |
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Preference number: 1 (lower is better) Translates to: MTLRSSSFQRLGSQA*TNAEFMGAGHRSHA Trigger: AGCATGGGATCGGTGGCCAGCACCCATAAACTCAGCATTGGTGCATGCCTGTGATCCCAGCCTCTGGAAACTGGATGACCTCAAGGTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214797.3 |
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| 3UTR CAA 90 bp | GGAGCAAGAGCAAGAGCTAGACTCCCTTCTTCCAATGTCCTTATATaGTCTCCAGCAGAAGGTGTAGCCCAGATTAAAGGTGTGTTCCAC | + |
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Preference number: 2 (lower is better) Translates to: GARARARLPSSNVLI*SPAEGVAQIKGVFH Trigger: GTGGAACACACCTTTAATCTGGGCTACACCTTCTGCTGGAGACAATATAAGGACATTGGAAGAAGGGAGTCTAGCTCTTGCTCTTGCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214797.3 |
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| 3UTR CCA 72 bp | GGCTGGGATCACAGGCATGCACCAATGCTGAGTTTATaGGTGCTGGCCACCGATCCCATGCTTTATGAATAT | + |
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Preference number: 3 (lower is better) Translates to: GWDHRHAPMLSL*VLATDPMLYEY Trigger: ATATTCATAAAGCATGGGATCGGTGGCCAGCACCCATAAACTCAGCATTGGTGCATGCCTGTGATCCCAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214797.3 |
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| 3UTR CCA 72 bp | CCCAATTCCCAACAATTGTTCAGTCACAGCTGTGAATaGAAGTCCAAGGATCTAGCAGTTACTCAGTCTCAC | + |
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Preference number: 3 (lower is better) Translates to: PNSQQLFSHSCE*KSKDLAVTQSH Trigger: GTGAGACTGAGTAACTGCTAGATCCTTGGACTTCCATTCACAGCTGTGACTGAACAATTGTTGGGAATTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214797.3 |
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| CDS-3UTR CAA 90 bp | CTCTGCCTCCCAAGTGCTGGGATTAAAGGTGCGCCACCTCCCGGCCTTTCTACTGTCAGTGTTCCCCCATaGACAACAATCAGCAGACCA | + |
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Preference number: 5 (lower is better) Translates to: LCLPSAGIKGAPPPGLSTVSVPP*TTISRP Trigger: TGGTCTGCTGATTGTTGTCAATGGGGGAACACTGAC...AGTAGAAAGGCCGGGAGGTGGCGCACCTTTAATCCCAGCACTTGGGAGGCAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214797.3 |
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| CDS-3UTR CAA 90 bp | ATCCCATGCTTTATGAATATCAGCATTTTAGCAGCTGAGCCACATCCCCAGTCCAACACAGTTACCATCTaGTCTATAGGAAGAGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: IPCFMNISILAAEPHPQSNTVTI*SIGRVA Trigger: AGCCACTCTTCCTATAGACAAGATGGTAACTGTGTT...GGACTGGGGATGTGGCTCAGCTGCTAAAATGCTGATATTCATAAAGCATGGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214797.3 |
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| CDS-3UTR CAA 90 bp | AAAGGTGCGCCACCTCCCGGCCTTTCTACTCCTTTTATCCCATCAGTTTGTATTTTTTATCTACTTTTGTaGCCCTGGTGCATAGAATCT | + |
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Preference number: 5 (lower is better) Translates to: KGAPPPGLSTPFIPSVCIFYLLL*PWCIES Trigger: AGATTCTATGCACCAGGGCAACAAAAGTAGATAAAA...AATACAAACTGATGGGATAAAAGGAGTAGAAAGGCCGGGAGGTGGCGCACCTTT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000214797.3 |
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| CDS-3UTR CAA 90 bp | TACTCCTTTTATCCCATCAGTTTGTATTCAACATTATTCCAGACGCATGGCAATGAAGATGAGAAGAACTaGGGCAAGGGAATGGACAAA | + |
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Preference number: 5 (lower is better) Translates to: YSFYPISLYSTLFQTHGNEDEKN*GKGMDK Trigger: TTTGTCCATTCCCTTGCCCAAGTTCTTCTCATCTTC...ATTGCCATGCGTCTGGAATAATGTTGAATACAAACTGATGGGATAAAAGGAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214797.3 |
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| CDS-3UTR CAA 90 bp | ACTCCTTTTATCCCATCAGTTTGTATTCAACATTATTCCAGACGCATGGCAATACTGGTGCATAGAATCTaGATGACTTTCTTCACTTCT | + |
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Preference number: 5 (lower is better) Translates to: TPFIPSVCIQHYSRRMAILVHRI*MTFFTS Trigger: AGAAGTGAAGAAAGTCATCAAGATTCTATGCACCAG...TATTGCCATGCGTCTGGAATAATGTTGAATACAAACTGATGGGATAAAAGGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214797.3 |
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| CDS CAA 72 bp | AGGACCACAAAGCTGATCACAGTCAGTGTTCCCCCATaGACAACAATCAGCAGACCAATGAGGAAGGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: RTTKLITVSVPP*TTISRPMRKVS Trigger: AGACACCTTCCTCATTGGTCTGCTGATTGTTGTCAATGGGGGAACACTGACTGTGATCAGCTTTGTGGTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077123.4 ENSMUST00000214797.3 |
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| CDS CAA 72 bp | TTTTTATCTACTTTTGTTGCCCTGGTGCATAGAATCTaGATGACTTTCTTCACTTCTGCATTTCTCAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: FLSTFVALVHRI*MTFFTSAFLRE Trigger: CTCCCTGAGAAATGCAGAAGTGAAGAAAGTCATCAAGATTCTATGCACCAGGGCAACAAAAGTAGATAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077123.4 ENSMUST00000214797.3 |
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