Pregenerated sensors for OLFR1564 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096169Ensembl transcript IDs: ENSMUST00000112162.4, ENSMUST00000208645.3, ENSMUST00000213642.2, ENSMUST00000213751.2, ENSMUST00000215450.2
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACACTTGTAATTCCAACCCTAGTGAGGCAGAAACAGGATGATTCCTaGGACTTGCAGGTCAGCAAGCCGACCCTACTTGGTGAATCCCAG | + |
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Preference number: 1 (lower is better) Translates to: TLVIPTLVRQKQDDS*DLQVSKPTLLGESQ Trigger: CTGGGATTCACCAAGTAGGGTCGGCTTGCTGACCTGCAAGTCCCAGGAATCATCCTGTTTCTGCCTCACTAGGGTTGGAATTACAAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR GCA 90 bp | CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATGTGTGTGTaGAAAGGTGCATGTGTGCACGTCACAAAGCAACTTGCAGAAGTT | + |
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Preference number: 1 (lower is better) Translates to: LCVCVCVCVCVCMCV*KGACVHVTKQLAEV Trigger: AACTTCTGCAAGTTGCTTTGTGACGTGCACACATGCACCTTTGCACACACACATGCACACACACACACACACACACACACACACACACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR CCA 90 bp | TGCCCATGGAAAGCAGGGAGAGTAGTGAGTTTGAACCCAGTAAAATaGAAGAGAGAACTGACTCCACAAAGTTGTCCTCTGACCTCCACT | + |
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Preference number: 1 (lower is better) Translates to: CPWKAGRVVSLNPVK*KRELTPQSCPLTST Trigger: AGTGGAGGTCAGAGGACAACTTTGTGGAGTCAGTTCTCTCTTCCATTTTACTGGGTTCAAACTCACTACTCTCCCTGCTTTCCATGGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR TCA 90 bp | ACATACACAAATACACAAAAGATCTCTCTTCCTCTCCCTGCTCTTTaGGACAGAGCCTCATTATGTAGCCCAGGTATGCCTTTACCTCAC | + |
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Preference number: 1 (lower is better) Translates to: TYTNTQKISLPLPAL*DRASLCSPGMPLPH Trigger: GTGAGGTAAAGGCATACCTGGGCTACATAATGAGGCTCTGTCTCAAAGAGCAGGGAGAGGAAGAGAGATCTTTTGTGTATTTGTGTATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR CCA 90 bp | CACAAGGTTGAACATCTGAGTTTGACCCCCAATATTCACCATAAGTaGTGGTATACACTTGTAATTCCAACCCTAGTGAGGCAGAAACAG | + |
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Preference number: 1 (lower is better) Translates to: HKVEHLSLTPNIHHK*WYTLVIPTLVRQKQ Trigger: CTGTTTCTGCCTCACTAGGGTTGGAATTACAAGTGTATACCACCACTTATGGTGAATATTGGGGGTCAAACTCAGATGTTCAACCTTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR CCA 90 bp | AAGGTTGAACATCTGAGTTTGACCCCCAATATTCACCATAAGTGGTaGTATACACTTGTAATTCCAACCCTAGTGAGGCAGAAACAGGAT | + |
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Preference number: 1 (lower is better) Translates to: KVEHLSLTPNIHHKW*YTLVIPTLVRQKQD Trigger: ATCCTGTTTCTGCCTCACTAGGGTTGGAATTACAAGTGTATACCACCACTTATGGTGAATATTGGGGGTCAAACTCAGATGTTCAACCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR CCA 90 bp | GCACACATGCCATGCCACACATGTAGAGGTCAGCAAAACAATTTGTaGACTAGATTCTTTTCTTCTACTATGTGGGTCTCAGGGATTAAA | + |
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Preference number: 1 (lower is better) Translates to: AHMPCHTCRGQQNNL*TRFFSSTMWVSGIK Trigger: TTTAATCCCTGAGACCCACATAGTAGAAGAAAAGAATCTAGTCCACAAATTGTTTTGCTGACCTCTACATGTGTGGCATGGCATGTGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR TCA 90 bp | CAGCTCGTTTACATTTACAATGTACCCCCTCCCAAGTCTTACACTTaGATGCTTCTTTCCAAACCATATCAGGAGTATGTCCCTTCATTT | + |
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Preference number: 1 (lower is better) Translates to: QLVYIYNVPPPKSYT*MLLSKPYQEYVPSF Trigger: AAATGAAGGGACATACTCCTGATATGGTTTGGAAAGAAGCATTCAAGTGTAAGACTTGGGAGGGGGTACATTGTAAATGTAAACGAGCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR TCA 90 bp | CATGTATCTATGAAAAGCAATAAAGCACTAATCTACATTACAGTGTaGGAGAATCCTGAAGACATGATGCTGTGTAGGAAGAGCCACCAT | + |
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Preference number: 1 (lower is better) Translates to: HVSMKSNKALIYITV*ENPEDMMLCRKSHH Trigger: ATGGTGGCTCTTCCTACACAGCATCATGTCTTCAGGATTCTCTCACACTGTAATGTAGATTAGTGCTTTATTGCTTTTCATAGATACATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR TCA 90 bp | ACTAAAACTCAGTTCATCCGCTCAGCACCAAATGTCTTTACTAGCTaGGCCATCTTGCTGACCCAAGGTTTATTTTTACCTTTATATTTA | + |
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Preference number: 1 (lower is better) Translates to: TKTQFIRSAPNVFTS*AILLTQGLFLPLYL Trigger: TAAATATAAAGGTAAAAATAAACCTTGGGTCAGCAAGATGGCTCAGCTAGTAAAGACATTTGGTGCTGAGCGGATGAACTGAGTTTTAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR CAA 90 bp | GTAATTCCAACCCTAGTGAGGCAGAAACAGGATGATTCCTGGGACTaGCAGGTCAGCAAGCCGACCCTACTTGGTGAATCCCAGATTTTG | + |
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Preference number: 2 (lower is better) Translates to: VIPTLVRQKQDDSWD*QVSKPTLLGESQIL Trigger: CAAAATCTGGGATTCACCAAGTAGGGTCGGCTTGCTGACCTGCAAGTCCCAGGAATCATCCTGTTTCTGCCTCACTAGGGTTGGAATTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR-3UTR TCA 90 bp | CCAACCCTAGTGAGGCAGAAACAGGATGATTCCTGGGACTTGCAGGTCAGCAAGTTAAGTTTGGGAGTGTaGCAAAAGGGGAAGGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: PTLVRQKQDDSWDLQVSKLSLGV*QKGKEE Trigger: TTCCTCCTTCCCCTTTTGTCACACTCCCAAACTTAA...CTTGCTGACCTGCAAGTCCCAGGAATCATCCTGTTTCTGCCTCACTAGGGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR-3UTR TCA 90 bp | ACACTTGTAATTCCAACCCTAGTGAGGCAGAAACAGGATGATTCCTGGGACTTGCCTCTCCCTGCTCTTTaGGACAGAGCCTCATTATGT | + |
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Preference number: 2 (lower is better) Translates to: TLVIPTLVRQKQDDSWDLPLPAL*DRASLC Trigger: ACATAATGAGGCTCTGTCTCAAAGAGCAGGGAGAGG...CAAGTCCCAGGAATCATCCTGTTTCTGCCTCACTAGGGTTGGAATTACAAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR-3UTR GCA 90 bp | GTCACAAAGCAACTTGCAGAAGTTGGTTTTCTTCCATATCCTGCATCCAGGACTCTCTCTTCCTCTCCCTaGTCTTTGAGACAGAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: VTKQLAEVGFLPYPASRTLSSSP*SLRQSL Trigger: GAGGCTCTGTCTCAAAGAGCAGGGAGAGGAAGAGAG...AGTCCTGGATGCAGGATATGGAAGAAAACCAACTTCTGCAAGTTGCTTTGTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR CAA 90 bp | AATGGGTGTAGGTGCTGCCCATGGAAAGCAGGGAGAGTAGTGAGTTaGAACCCAGTAAAATGGAAGAGAGAACTGACTCCACAAAGTTGT | + |
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Preference number: 2 (lower is better) Translates to: NGCRCCPWKAGRVVS*NPVKWKRELTPQSC Trigger: ACAACTTTGTGGAGTCAGTTCTCTCTTCCATTTTACTGGGTTCAAACTCACTACTCTCCCTGCTTTCCATGGGCAGCACCTACACCCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR CAA 90 bp | ATTACCGTGGAAACCATAATGAAGCTTCTGGGTACTAGCCATGAGTaGTGGTGCACAACTTTAATACCAGCACTAGTGAGGCAAGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: ITVETIMKLLGTSHE*WCTTLIPALVRQGQ Trigger: CTGCCCTTGCCTCACTAGTGCTGGTATTAAAGTTGTGCACCACAACTCATGGCTAGTACCCAGAAGCTTCATTATGGTTTCCACGGTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGAAAGCAGGGAGAGTAGTGAGTTTGAACCCAGTAAAATGGAAGAGAGAACTGAGGCAGAAACAGGATaGTTCCTGGGACTTGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: MESRESSEFEPSKMEERTEAETG*FLGLAG Trigger: ACCTGCAAGTCCCAGGAATCATCCTGTTTCTGCCTC...AGTTCTCTCTTCCATTTTACTGGGTTCAAACTCACTACTCTCCCTGCTTTCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR-3UTR TCA 90 bp | GTCACAAAGCAACTTGCAGAAGTTGGTTTTCTTCCATATCCTGCATCCAGGACTGTCTCTTGTTCTCCATaGACCTTCCCTTCCCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: VTKQLAEVGFLPYPASRTVSCSP*TFPSQS Trigger: AGACTGGGAAGGGAAGGTTCATGGAGAACAAGAGAC...AGTCCTGGATGCAGGATATGGAAGAAAACCAACTTCTGCAAGTTGCTTTGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR-3UTR GCA 90 bp | TCATCGGTGACAATTCCCCACATTGATGAGTGGGAGAGATTAACATCAGAAAATCTCAATGGGTGTAGGTaGTGCCCATGGAAAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: SSVTIPHIDEWERLTSENLNGCR*CPWKAG Trigger: CCCTGCTTTCCATGGGCAGCACCTACACCCATTGAG...ATTTTCTGATGTTAATCTCTCCCACTCATCAATGTGGGGAATTGTCACCGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR CAA 90 bp | AACAGGATGATTCCTGGGACTTGCAGGTCAGCAAGCCGACCCTACTaGGTGAATCCCAGATTTTGTGAGAGACTCTGTCTCATAAATAAA | + |
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Preference number: 2 (lower is better) Translates to: NRMIPGTCRSASRPY*VNPRFCERLCLINK Trigger: TTTATTTATGAGACAGAGTCTCTCACAAAATCTGGGATTCACCAAGTAGGGTCGGCTTGCTGACCTGCAAGTCCCAGGAATCATCCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR-3UTR TCA 90 bp | AATGTCCCATGGTTCTATGAGTGGAAAATTCCACATTTGAGTGTGATGGGTTACGAGGCAGAAACAGGATaGTTCCTGGGACTTGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: NVPWFYEWKIPHLSVMGYEAETG*FLGLAG Trigger: ACCTGCAAGTCCCAGGAATCATCCTGTTTCTGCCTC...GTAACCCATCACACTCAAATGTGGAATTTTCCACTCATAGAACCATGGGACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR-3UTR TCA 90 bp | GTCACAAAGCAACTTGCAGAAGTTGGTTTTCTTCCATATCCTGCATCCAGGACTAGAATCCTGAAGACATaGTGCTGTGTAGGAAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: VTKQLAEVGFLPYPASRTRILKT*CCVGRA Trigger: GGCTCTTCCTACACAGCATCATGTCTTCAGGATTCT...AGTCCTGGATGCAGGATATGGAAGAAAACCAACTTCTGCAAGTTGCTTTGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR-3UTR TCA 90 bp | GTCACAAAGCAACTTGCAGAAGTTGGTTTTCTTCCATATCCTGCATCCAGGACTGGGCAGGAGAATTTCTaGGTTTCAAGCTGGCTTGAT | + |
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Preference number: 2 (lower is better) Translates to: VTKQLAEVGFLPYPASRTGQENF*VSSWLD Trigger: ATCAAGCCAGCTTGAAACTCAGAAATTCTCCTGCCC...AGTCCTGGATGCAGGATATGGAAGAAAACCAACTTCTGCAAGTTGCTTTGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR-3UTR GCA 90 bp | ACACTTGTAATTCCAACCCTAGTGAGGCAGAAACAGGATGATTCCTGGGACTTGAAAGGTAGACAGTTATaGCAAGTAGTGGTGGGACAC | + |
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Preference number: 2 (lower is better) Translates to: TLVIPTLVRQKQDDSWDLKGRQL*QVVVGH Trigger: GTGTCCCACCACTACTTGGCATAACTGTCTACCTTT...CAAGTCCCAGGAATCATCCTGTTTCTGCCTCACTAGGGTTGGAATTACAAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR CAA 90 bp | GAGTTTGAACCCAGTAAAATGGAAGAGAGAACTGACTCCACAAAGTaGTCCTCTGACCTCCACTTCACGGTTCACCTACATACATACACA | + |
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Preference number: 2 (lower is better) Translates to: EFEPSKMEERTDSTK*SSDLHFTVHLHTYT Trigger: TGTGTATGTATGTAGGTGAACCGTGAAGTGGAGGTCAGAGGACAACTTTGTGGAGTCAGTTCTCTCTTCCATTTTACTGGGTTCAAACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR CAA 90 bp | TGTGCAAAGGTGCATGTGTGCACGTCACAAAGCAACTTGCAGAAGTaGGTTTTCTTCCATATCCTGCATCCAGGACTAAAACTCAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: CAKVHVCTSQSNLQK*VFFHILHPGLKLSS Trigger: TGAACTGAGTTTTAGTCCTGGATGCAGGATATGGAAGAAAACCAACTTCTGCAAGTTGCTTTGTGACGTGCACACATGCACCTTTGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR-3UTR TCA 90 bp | GTCACAAAGCAACTTGCAGAAGTTGGTTTTCTTCCATATCCTGCATCCAGGACTATTGTCTCACAAGGTTaGACATCTGAGTTTGACCCC | + |
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Preference number: 2 (lower is better) Translates to: VTKQLAEVGFLPYPASRTIVSQG*TSEFDP Trigger: GGGGTCAAACTCAGATGTTCAACCTTGTGAGACAAT...AGTCCTGGATGCAGGATATGGAAGAAAACCAACTTCTGCAAGTTGCTTTGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR-3UTR TCA 90 bp | TCATCGGTGACAATTCCCCACATTGATGAGTGGGAGAGATTAACATCAGAAAATGTCTCTTGTTCTCCATaGACCTTCCCTTCCCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: SSVTIPHIDEWERLTSENVSCSP*TFPSQS Trigger: AGACTGGGAAGGGAAGGTTCATGGAGAACAAGAGAC...ATTTTCTGATGTTAATCTCTCCCACTCATCAATGTGGGGAATTGTCACCGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR-3UTR GCA 90 bp | TCATCGGTGACAATTCCCCACATTGATGAGTGGGAGAGATTAACATCAGAAAATAGCCCAGTAGTAGAATaGCTGCCTGGCAAATGCTAC | + |
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Preference number: 2 (lower is better) Translates to: SSVTIPHIDEWERLTSENSPVVE*LPGKCY Trigger: GTAGCATTTGCCAGGCAGGCATTCTACTACTGGGCT...ATTTTCTGATGTTAATCTCTCCCACTCATCAATGTGGGGAATTGTCACCGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR-3UTR TCA 90 bp | ATGCTTCTTTCCAAACCATATCAGGAGTATGTCCCTTCATTTTTCACTCATTTGGAGGCAGAAACAGGATaGTTCCTGGGACTTGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: MLLSKPYQEYVPSFFTHLEAETG*FLGLAG Trigger: ACCTGCAAGTCCCAGGAATCATCCTGTTTCTGCCTC...CAAATGAGTGAAAAATGAAGGGACATACTCCTGATATGGTTTGGAAAGAAGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR-3UTR TCA 90 bp | GTCACAAAGCAACTTGCAGAAGTTGGTTTTCTTCCATATCCTGCATCCAGGACTGTGGTCATGAGAGAATaGGTGAAAAAGAGCAATGGT | + |
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Preference number: 2 (lower is better) Translates to: VTKQLAEVGFLPYPASRTVVMRE*VKKSNG Trigger: ACCATTGCTCTTTTTCACTCATTCTCTCATGACCAC...AGTCCTGGATGCAGGATATGGAAGAAAACCAACTTCTGCAAGTTGCTTTGTGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR-3UTR TCA 90 bp | TCATCGGTGACAATTCCCCACATTGATGAGTGGGAGAGATTAACATCAGAAAATAGAATCCTGAAGACATaGTGCTGTGTAGGAAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: SSVTIPHIDEWERLTSENRILKT*CCVGRA Trigger: GGCTCTTCCTACACAGCATCATGTCTTCAGGATTCT...ATTTTCTGATGTTAATCTCTCCCACTCATCAATGTGGGGAATTGTCACCGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR-3UTR GCA 90 bp | TGGAATGTCCCATGGTTCTATGAGTGGAAAATTCCACATTTGAGTGTGATGGGTTGCCTGCCTGGCAAATaGTACCATGCAAGATGTAAT | + |
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Preference number: 2 (lower is better) Translates to: WNVPWFYEWKIPHLSVMGCLPGK*YHARCN Trigger: ATTACATCTTGCATGGTAGCATTTGCCAGGCAGGCA...ACCCATCACACTCAAATGTGGAATTTTCCACTCATAGAACCATGGGACATTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR-3UTR CCA 90 bp | ATGCTTCTTTCCAAACCATATCAGGAGTATGTCCCTTCATTTTTCACTCATTTGTGTAGGTGCTGCCCATaGAAAGCAGGGAGAGTAGTG | + |
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Preference number: 2 (lower is better) Translates to: MLLSKPYQEYVPSFFTHLCRCCP*KAGRVV Trigger: CACTACTCTCCCTGCTTTCCATGGGCAGCACCTACA...CAAATGAGTGAAAAATGAAGGGACATACTCCTGATATGGTTTGGAAAGAAGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR-3UTR TCA 90 bp | TCATTATGTAGCCCAGGTATGCCTTTACCTCACAGTATAATTGAGGTTGGTCTTTTAAGTTTGGGAGTGTaGCAAAAGGGGAAGGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: SLCSPGMPLPHSIIEVGLLSLGV*QKGKEE Trigger: TTCCTCCTTCCCCTTTTGTCACACTCCCAAACTTAA...AAGACCAACCTCAATTATACTGTGAGGTAAAGGCATACCTGGGCTACATAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR-3UTR TCA 90 bp | ACACACACACACACACAAGCTATGAAGACATACATTCCCACAAAAACTGTGCATTTAAGTTTGGGAGTGTaGCAAAAGGGGAAGGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: THTHTQAMKTYIPTKTVHLSLGV*QKGKEE Trigger: TTCCTCCTTCCCCTTTTGTCACACTCCCAAACTTAA...ATGCACAGTTTTTGTGGGAATGTATGTCTTCATAGCTTGTGTGTGTGTGTGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR-3UTR TCA 90 bp | TCATCGGTGACAATTCCCCACATTGATGAGTGGGAGAGATTAACATCAGAAAATTTAAGTTTGGGAGTGTaGCAAAAGGGGAAGGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: SSVTIPHIDEWERLTSENLSLGV*QKGKEE Trigger: TTCCTCCTTCCCCTTTTGTCACACTCCCAAACTTAA...ATTTTCTGATGTTAATCTCTCCCACTCATCAATGTGGGGAATTGTCACCGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR-3UTR TCA 90 bp | AATGTCCCATGGTTCTATGAGTGGAAAATTCCACATTTGAGTGTGATGGGTTACATTGTCTCACAAGGTTaGACATCTGAGTTTGACCCC | + |
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Preference number: 2 (lower is better) Translates to: NVPWFYEWKIPHLSVMGYIVSQG*TSEFDP Trigger: GGGGTCAAACTCAGATGTTCAACCTTGTGAGACAAT...GTAACCCATCACACTCAAATGTGGAATTTTCCACTCATAGAACCATGGGACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAATGTCCCATGGTTCTATGAGTGGAAAATTCCACATTTGAGTGTGATGGGTATACTAGCCCAAAGGTaGAGACAATGCAAATGTCCA | + |
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Preference number: 2 (lower is better) Translates to: WNVPWFYEWKIPHLSVMGILAQR*RQCKCP Trigger: TGGACATTTGCATTGTCTTCACCTTTGGGCTAGTAT...ACCCATCACACTCAAATGTGGAATTTTCCACTCATAGAACCATGGGACATTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR-3UTR TCA 90 bp | GTCACAAAGCAACTTGCAGAAGTTGGTTTTCTTCCATATCCTGCATCCAGGACTTGTCCCATGGTTCTATaGGTGGAAAATTCCACATTT | + |
|
Preference number: 2 (lower is better) Translates to: VTKQLAEVGFLPYPASRTCPMVL*VENSTF Trigger: AAATGTGGAATTTTCCACTCATAGAACCATGGGACA...AGTCCTGGATGCAGGATATGGAAGAAAACCAACTTCTGCAAGTTGCTTTGTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGCTTCTTTCCAAACCATATCAGGAGTATGTCCCTTCATTTTTCACTCATTTGAGCCCAGTAGTAGAATaGCTGCCTGGCAAATGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: MLLSKPYQEYVPSFFTHLSPVVE*LPGKCY Trigger: GTAGCATTTGCCAGGCAGGCATTCTACTACTGGGCT...CAAATGAGTGAAAAATGAAGGGACATACTCCTGATATGGTTTGGAAAGAAGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR CCA 90 bp | GTCACAAAGCAACTTGCAGAAGTTGGTTTTCTTCCATATCCTGCATCCAGGACTATATTTGTACAACACTaGGCTAGGATTCACAGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: VTKQLAEVGFLPYPASRTIFVQH*ARIHRK Trigger: CTTCCTGTGAATCCTAGCCCAGTGTTGTACAAATAT...AGTCCTGGATGCAGGATATGGAAGAAAACCAACTTCTGCAAGTTGCTTTGTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR CCA 90 bp | GTCACAAAGCAACTTGCAGAAGTTGGTTTTCTTCCATATCCTGCATCCAGGACTTCCTGGTTGGAGAAGTaGTTCAATCAGAAAAGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: VTKQLAEVGFLPYPASRTSWLEK*FNQKSD Trigger: ATCACTTTTCTGATTGAACCACTTCTCCAACCAGGA...AGTCCTGGATGCAGGATATGGAAGAAAACCAACTTCTGCAAGTTGCTTTGTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGGAAAGCAGGGAGAGTAGTGAGTTTGAACCCAGTAAAATGGAAGAGAGAACTATGTCCATCAATTGGTaGGGTGAATGTATACCACCA | + |
|
Preference number: 2 (lower is better) Translates to: MESRESSEFEPSKMEERTMSINW*GECIPP Trigger: TGGTGGTATACATTCACCCCACCAATTGATGGACAT...AGTTCTCTCTTCCATTTTACTGGGTTCAAACTCACTACTCTCCCTGCTTTCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR TCA 90 bp | TCATCGGTGACAATTCCCCACATTGATGAGTGGGAGAGATTAACATCAGAAAATGTGGTCATGAGAGAATaGGTGAAAAAGAGCAATGGT | + |
|
Preference number: 2 (lower is better) Translates to: SSVTIPHIDEWERLTSENVVMRE*VKKSNG Trigger: ACCATTGCTCTTTTTCACTCATTCTCTCATGACCAC...ATTTTCTGATGTTAATCTCTCCCACTCATCAATGTGGGGAATTGTCACCGATGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR TCA 90 bp | ACACACACACACACACAAGCTATGAAGACATACATTCCCACAAAAACTGTGCATATACTAGCCCAAAGGTaGAGACAATGCAAATGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: THTHTQAMKTYIPTKTVHILAQR*RQCKCP Trigger: TGGACATTTGCATTGTCTTCACCTTTGGGCTAGTAT...ATGCACAGTTTTTGTGGGAATGTATGTCTTCATAGCTTGTGTGTGTGTGTGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR TCA 90 bp | GTCACAAAGCAACTTGCAGAAGTTGGTTTTCTTCCATATCCTGCATCCAGGACTACCGCACCTTCTCTATaGAGTAAAATAACTCATATG | + |
|
Preference number: 2 (lower is better) Translates to: VTKQLAEVGFLPYPASRTTAPSL*SKITHM Trigger: CATATGAGTTATTTTACTTCATAGAGAAGGTGCGGT...AGTCCTGGATGCAGGATATGGAAGAAAACCAACTTCTGCAAGTTGCTTTGTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR TCA 90 bp | TCATCGGTGACAATTCCCCACATTGATGAGTGGGAGAGATTAACATCAGAAAATCCCAAGTCTTACACTTaGATGCTTCTTTCCAAACCA | + |
|
Preference number: 2 (lower is better) Translates to: SSVTIPHIDEWERLTSENPKSYT*MLLSKP Trigger: TGGTTTGGAAAGAAGCATTCAAGTGTAAGACTTGGG...ATTTTCTGATGTTAATCTCTCCCACTCATCAATGTGGGGAATTGTCACCGATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR CCA 90 bp | ACACACACACACACACAAGCTATGAAGACATACATTCCCACAAAAACTGTGCATATGTCCATCAATTGGTaGGGTGAATGTATACCACCA | + |
|
Preference number: 2 (lower is better) Translates to: THTHTQAMKTYIPTKTVHMSINW*GECIPP Trigger: TGGTGGTATACATTCACCCCACCAATTGATGGACAT...ATGCACAGTTTTTGTGGGAATGTATGTCTTCATAGCTTGTGTGTGTGTGTGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR CCA 90 bp | GTCACAAAGCAACTTGCAGAAGTTGGTTTTCTTCCATATCCTGCATCCAGGACTCCATGGTTCTATGAGTaGAAAATTCCACATTTGAGT | + |
|
Preference number: 2 (lower is better) Translates to: VTKQLAEVGFLPYPASRTPWFYE*KIPHLS Trigger: ACTCAAATGTGGAATTTTCCACTCATAGAACCATGG...AGTCCTGGATGCAGGATATGGAAGAAAACCAACTTCTGCAAGTTGCTTTGTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR TCA 90 bp | AATGTCCCATGGTTCTATGAGTGGAAAATTCCACATTTGAGTGTGATGGGTTACAGCCTGTCTAAAGAATaGGTTAGAAAAGCCAATGCT | + |
|
Preference number: 2 (lower is better) Translates to: NVPWFYEWKIPHLSVMGYSLSKE*VRKANA Trigger: AGCATTGGCTTTTCTAACTCATTCTTTAGACAGGCT...GTAACCCATCACACTCAAATGTGGAATTTTCCACTCATAGAACCATGGGACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGCTTCTTTCCAAACCATATCAGGAGTATGTCCCTTCATTTTTCACTCATTTGATTGTCTCACAAGGTTaGACATCTGAGTTTGACCCC | + |
|
Preference number: 2 (lower is better) Translates to: MLLSKPYQEYVPSFFTHLIVSQG*TSEFDP Trigger: GGGGTCAAACTCAGATGTTCAACCTTGTGAGACAAT...CAAATGAGTGAAAAATGAAGGGACATACTCCTGATATGGTTTGGAAAGAAGCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGGAAAGCAGGGAGAGTAGTGAGTTTGAACCCAGTAAAATGGAAGAGAGAACTGTTCAATCAGAAAAGTaGTTGTCTCACAAGGTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: MESRESSEFEPSKMEERTVQSEK*LSHKVE Trigger: TTCAACCTTGTGAGACAATCACTTTTCTGATTGAAC...AGTTCTCTCTTCCATTTTACTGGGTTCAAACTCACTACTCTCCCTGCTTTCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR CCA 90 bp | TCATCGGTGACAATTCCCCACATTGATGAGTGGGAGAGATTAACATCAGAAAATATATTTGTACAACACTaGGCTAGGATTCACAGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: SSVTIPHIDEWERLTSENIFVQH*ARIHRK Trigger: CTTCCTGTGAATCCTAGCCCAGTGTTGTACAAATAT...ATTTTCTGATGTTAATCTCTCCCACTCATCAATGTGGGGAATTGTCACCGATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR CCA 90 bp | AATGTCCCATGGTTCTATGAGTGGAAAATTCCACATTTGAGTGTGATGGGTTACATATTTGTACAACACTaGGCTAGGATTCACAGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: NVPWFYEWKIPHLSVMGYIFVQH*ARIHRK Trigger: CTTCCTGTGAATCCTAGCCCAGTGTTGTACAAATAT...GTAACCCATCACACTCAAATGTGGAATTTTCCACTCATAGAACCATGGGACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR CCA 90 bp | ACACACACACACACACAAGCTATGAAGACATACATTCCCACAAAAACTGTGCATATATTTGTACAACACTaGGCTAGGATTCACAGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: THTHTQAMKTYIPTKTVHIFVQH*ARIHRK Trigger: CTTCCTGTGAATCCTAGCCCAGTGTTGTACAAATAT...ATGCACAGTTTTTGTGGGAATGTATGTCTTCATAGCTTGTGTGTGTGTGTGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR CCA 90 bp | AATGTCCCATGGTTCTATGAGTGGAAAATTCCACATTTGAGTGTGATGGGTTACAAGTTTCTTCCTGGTTaGAGAAGTGGTTCAATCAGA | + |
|
Preference number: 2 (lower is better) Translates to: NVPWFYEWKIPHLSVMGYKFLPG*RSGSIR Trigger: TCTGATTGAACCACTTCTCCAACCAGGAAGAAACTT...GTAACCCATCACACTCAAATGTGGAATTTTCCACTCATAGAACCATGGGACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGAATGTCCCATGGTTCTATGAGTGGAAAATTCCACATTTGAGTGTGATGGGTTATACCACCAATCAGTaGAGTAACAGCATGTATCTA | + |
|
Preference number: 2 (lower is better) Translates to: WNVPWFYEWKIPHLSVMGYTTNQ*SNSMYL Trigger: TAGATACATGCTGTTACTCCACTGATTGGTGGTATA...ACCCATCACACTCAAATGTGGAATTTTCCACTCATAGAACCATGGGACATTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR CCA 90 bp | AATGTCCCATGGTTCTATGAGTGGAAAATTCCACATTTGAGTGTGATGGGTTACAGCCTCATACCCAGATaGCAGAAATATAAAATGAGG | + |
|
Preference number: 2 (lower is better) Translates to: NVPWFYEWKIPHLSVMGYSLIPR*QKYKMR Trigger: CCTCATTTTATATTTCTGCCATCTGGGTATGAGGCT...GTAACCCATCACACTCAAATGTGGAATTTTCCACTCATAGAACCATGGGACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR TCA 90 bp | TCATCGGTGACAATTCCCCACATTGATGAGTGGGAGAGATTAACATCAGAAAATGTTCAATCAGAAAAGTaGTTGTCTCACAAGGTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: SSVTIPHIDEWERLTSENVQSEK*LSHKVE Trigger: TTCAACCTTGTGAGACAATCACTTTTCTGATTGAAC...ATTTTCTGATGTTAATCTCTCCCACTCATCAATGTGGGGAATTGTCACCGATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGCTTCTTTCCAAACCATATCAGGAGTATGTCCCTTCATTTTTCACTCATTTGGTGGTCATGAGAGAATaGGTGAAAAAGAGCAATGGT | + |
|
Preference number: 2 (lower is better) Translates to: MLLSKPYQEYVPSFFTHLVVMRE*VKKSNG Trigger: ACCATTGCTCTTTTTCACTCATTCTCTCATGACCAC...CAAATGAGTGAAAAATGAAGGGACATACTCCTGATATGGTTTGGAAAGAAGCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR TCA 90 bp | TCATCGGTGACAATTCCCCACATTGATGAGTGGGAGAGATTAACATCAGAAAATACCGCACCTTCTCTATaGAGTAAAATAACTCATATG | + |
|
Preference number: 2 (lower is better) Translates to: SSVTIPHIDEWERLTSENTAPSL*SKITHM Trigger: CATATGAGTTATTTTACTTCATAGAGAAGGTGCGGT...ATTTTCTGATGTTAATCTCTCCCACTCATCAATGTGGGGAATTGTCACCGATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR GCA 90 bp | TCATCGGTGACAATTCCCCACATTGATGAGTGGGAGAGATTAACATCAGAAAATTTCCCACAAAAACTGTaGATGAACATTTATAGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: SSVTIPHIDEWERLTSENFPQKL*MNIYSS Trigger: GCTGCTATAAATGTTCATGCACAGTTTTTGTGGGAA...ATTTTCTGATGTTAATCTCTCCCACTCATCAATGTGGGGAATTGTCACCGATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGGAAAGCAGGGAGAGTAGTGAGTTTGAACCCAGTAAAATGGAAGAGAGAACTTTAAAAGTTTCTTCCTaGTTGGAGAAGTGGTTCAAT | + |
|
Preference number: 2 (lower is better) Translates to: MESRESSEFEPSKMEERTLKVSS*LEKWFN Trigger: ATTGAACCACTTCTCCAACCAGGAAGAAACTTTTAA...AGTTCTCTCTTCCATTTTACTGGGTTCAAACTCACTACTCTCCCTGCTTTCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR CCA 90 bp | ACACACACACACACACAAGCTATGAAGACATACATTCCCACAAAAACTGTGCATTATACCACCAATCAGTaGAGTAACAGCATGTATCTA | + |
|
Preference number: 2 (lower is better) Translates to: THTHTQAMKTYIPTKTVHYTTNQ*SNSMYL Trigger: TAGATACATGCTGTTACTCCACTGATTGGTGGTATA...ATGCACAGTTTTTGTGGGAATGTATGTCTTCATAGCTTGTGTGTGTGTGTGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR GCA 90 bp | TCATCGGTGACAATTCCCCACATTGATGAGTGGGAGAGATTAACATCAGAAAATAGTCTTACACTTGAATaGTTCTTTCCAAACCATATC | + |
|
Preference number: 2 (lower is better) Translates to: SSVTIPHIDEWERLTSENSLTLE*FFPNHI Trigger: GATATGGTTTGGAAAGAAGCATTCAAGTGTAAGACT...ATTTTCTGATGTTAATCTCTCCCACTCATCAATGTGGGGAATTGTCACCGATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGCTTCTTTCCAAACCATATCAGGAGTATGTCCCTTCATTTTTCACTCATTTGATTCACCATAAGTGGTaGTATACACTTGTAATTCCA | + |
|
Preference number: 2 (lower is better) Translates to: MLLSKPYQEYVPSFFTHLIHHKW*YTLVIP Trigger: TGGAATTACAAGTGTATACCACCACTTATGGTGAAT...CAAATGAGTGAAAAATGAAGGGACATACTCCTGATATGGTTTGGAAAGAAGCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR CCA 72 bp | ATTCCAACCCTAGTGAGGCAGAAACAGGATGATTCCTaGGACTTGCAGGTCAGCAAGCCGACCCTACTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: IPTLVRQKQDDS*DLQVSKPTLLG Trigger: ACCAAGTAGGGTCGGCTTGCTGACCTGCAAGTCCCAGGAATCATCCTGTTTCTGCCTCACTAGGGTTGGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR TCA 72 bp | ACTTGTAATTCCAACCCTAGTGAGGCAGAAACAGGATaGTTCCTGGGACTTGCAGGTCAGCAAGCCGACCCT | + |
|
Preference number: 3 (lower is better) Translates to: TCNSNPSEAETG*FLGLAGQQADP Trigger: AGGGTCGGCTTGCTGACCTGCAAGTCCCAGGAATCATCCTGTTTCTGCCTCACTAGGGTTGGAATTACAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR GCA 72 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGCATGTGTGTGTaGAAAGGTGCATGTGTGCACGTCACAAAGCAACTT | + |
|
Preference number: 3 (lower is better) Translates to: CVCVCVCVCMCV*KGACVHVTKQL Trigger: AAGTTGCTTTGTGACGTGCACACATGCACCTTTGCACACACACATGCACACACACACACACACACACACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCACAAAGCAACTTGCAGAAGTTGGTTTTCTTCCATATCCTGCATCCAGGACTGGCAGATCTCTGAGGTaGAAGCCAGCCTGTCTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: VTKQLAEVGFLPYPASRTGRSLR*KPACLK Trigger: CTTTAGACAGGCTGGCTTCAACCTCAGAGATCTGCC...AGTCCTGGATGCAGGATATGGAAGAAAACCAACTTCTGCAAGTTGCTTTGTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAACCCTAGTGAGGCAGAAACAGGATGATTCCTGGGACTTGCAGGTCAGCAAGGTACTAAGATTATATTaGTACAACACTGGGCTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: PTLVRQKQDDSWDLQVSKVLRLY*YNTGLG Trigger: TCCTAGCCCAGTGTTGTACAAATATAATCTTAGTAC...CTTGCTGACCTGCAAGTCCCAGGAATCATCCTGTTTCTGCCTCACTAGGGTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR GCA 72 bp | GTGCAAAGGTGCATGTGTGCACGTCACAAAGCAACTTaGAGAAGTTGGTTTTCTTCCATATCCTGCATCCAG | + |
|
Preference number: 3 (lower is better) Translates to: VQRCMCARHKAT*RSWFSSISCIQ Trigger: CTGGATGCAGGATATGGAAGAAAACCAACTTCTGCAAGTTGCTTTGTGACGTGCACACATGCACCTTTGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR CCA 72 bp | CAGCAGTCAGTACTTTTCACTCCTAATTCATCTCTCTaGCCCAAAAAGCTGCCTTTAGGAGAAGCCGTGACT | + |
|
Preference number: 3 (lower is better) Translates to: QQSVLFTPNSSL*PKKLPLGEAVT Trigger: AGTCACGGCTTCTCCTAAAGGCAGCTTTTTGGGCCAGAGAGATGAATTAGGAGTGAAAAGTACTGACTGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR CAA 90 bp | TCATCGGTGACAATTCCCCACATTGATGAGTGGGAGAGATTAACATCAGAAAATGGCAGATCTCTGAGGTaGAAGCCAGCCTGTCTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SSVTIPHIDEWERLTSENGRSLR*KPACLK Trigger: CTTTAGACAGGCTGGCTTCAACCTCAGAGATCTGCC...ATTTTCTGATGTTAATCTCTCCCACTCATCAATGTGGGGAATTGTCACCGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR TCA 72 bp | GCAAGGGCAGGAGAATTTCTGAGTTTCAAGCTGGCTTaGTTTATAGAGTGGGTTCCAGGACATCCAAGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: ARAGEFLSFKLA*FIEWVPGHPRL Trigger: TAACCTTGGATGTCCTGGAACCCACTCTATAAATCAAGCCAGCTTGAAACTCAGAAATTCTCCTGCCCTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR CAA 90 bp | TCATCGGTGACAATTCCCCACATTGATGAGTGGGAGAGATTAACATCAGAAAATTCCTCTCCCTGCTCTTaGAGACAGAGCCTCATTATG | + |
|
Preference number: 3 (lower is better) Translates to: SSVTIPHIDEWERLTSENSSPCS*RQSLIM Trigger: CATAATGAGGCTCTGTCTCAAAGAGCAGGGAGAGGA...ATTTTCTGATGTTAATCTCTCCCACTCATCAATGTGGGGAATTGTCACCGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR CAA 90 bp | ACACACACACACACACAAGCTATGAAGACATACATTCCCACAAAAACTGTGCATTCCTCTCCCTGCTCTTaGAGACAGAGCCTCATTATG | + |
|
Preference number: 3 (lower is better) Translates to: THTHTQAMKTYIPTKTVHSSPCS*RQSLIM Trigger: CATAATGAGGCTCTGTCTCAAAGAGCAGGGAGAGGA...ATGCACAGTTTTTGTGGGAATGTATGTCTTCATAGCTTGTGTGTGTGTGTGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCACAAAGCAACTTGCAGAAGTTGGTTTTCTTCCATATCCTGCATCCAGGACTGGGAGAGTAGTGAGTTaGAACCCAGTAAAATGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: VTKQLAEVGFLPYPASRTGRVVS*NPVKWK Trigger: CTTCCATTTTACTGGGTTCAAACTCACTACTCTCCC...AGTCCTGGATGCAGGATATGGAAGAAAACCAACTTCTGCAAGTTGCTTTGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR TCA 72 bp | GGTGAAGACAATGCAAATGTCCATCAATTGGTGGGGTaGATGTATACCACCAATCAGTGGAGTAACAGCATG | + |
|
Preference number: 3 (lower is better) Translates to: GEDNANVHQLVG*MYTTNQWSNSM Trigger: CATGCTGTTACTCCACTGATTGGTGGTATACATTCACCCCACCAATTGATGGACATTTGCATTGTCTTCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR TCA 72 bp | CAGTTCATCCGCTCAGCACCAAATGTCTTTACTAGCTaGGCCATCTTGCTGACCCAAGGTTTATTTTTACCT | + |
|
Preference number: 3 (lower is better) Translates to: QFIRSAPNVFTS*AILLTQGLFLP Trigger: AGGTAAAAATAAACCTTGGGTCAGCAAGATGGCTCAGCTAGTAAAGACATTTGGTGCTGAGCGGATGAACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTTCTTTCCAAACCATATCAGGAGTATGTCCCTTCATTTTTCACTCATTTGGGCAGATCTCTGAGGTaGAAGCCAGCCTGTCTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: MLLSKPYQEYVPSFFTHLGRSLR*KPACLK Trigger: CTTTAGACAGGCTGGCTTCAACCTCAGAGATCTGCC...CAAATGAGTGAAAAATGAAGGGACATACTCCTGATATGGTTTGGAAAGAAGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCACAAAGCAACTTGCAGAAGTTGGTTTTCTTCCATATCCTGCATCCAGGACTAAAGTTTCTTCCTGGTaGGAGAAGTGGTTCAATCAG | + |
|
Preference number: 3 (lower is better) Translates to: VTKQLAEVGFLPYPASRTKVSSW*EKWFNQ Trigger: CTGATTGAACCACTTCTCCAACCAGGAAGAAACTTT...AGTCCTGGATGCAGGATATGGAAGAAAACCAACTTCTGCAAGTTGCTTTGTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCACAAAGCAACTTGCAGAAGTTGGTTTTCTTCCATATCCTGCATCCAGGACTTCCCAAGTCTTACACTaGAATGCTTCTTTCCAAACC | + |
|
Preference number: 3 (lower is better) Translates to: VTKQLAEVGFLPYPASRTSQVLH*NASFQT Trigger: GGTTTGGAAAGAAGCATTCAAGTGTAAGACTTGGGA...AGTCCTGGATGCAGGATATGGAAGAAAACCAACTTCTGCAAGTTGCTTTGTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR TCA 72 bp | CAGATCTCTGAGGTTGAAGCCAGCCTGTCTAAAGAATaGGTTAGAAAAGCCAATGCTACACAGACAAACCTT | + |
|
Preference number: 3 (lower is better) Translates to: QISEVEASLSKE*VRKANATQTNL Trigger: AAGGTTTGTCTGTGTAGCATTGGCTTTTCTAACTCATTCTTTAGACAGGCTGGCTTCAACCTCAGAGATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR CCA 72 bp | CCAAAGGTGAAGACAATGCAAATGTCCATCAATTGGTaGGGTGAATGTATACCACCAATCAGTGGAGTAACA | + |
|
Preference number: 3 (lower is better) Translates to: PKVKTMQMSINW*GECIPPISGVT Trigger: TGTTACTCCACTGATTGGTGGTATACATTCACCCCACCAATTGATGGACATTTGCATTGTCTTCACCTTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGGAAAGCAGGGAGAGTAGTGAGTTTGAACCCAGTAAAATGGAAGAGAGAACTAAAGTTTCTTCCTGGTaGGAGAAGTGGTTCAATCAG | + |
|
Preference number: 3 (lower is better) Translates to: MESRESSEFEPSKMEERTKVSSW*EKWFNQ Trigger: CTGATTGAACCACTTCTCCAACCAGGAAGAAACTTT...AGTTCTCTCTTCCATTTTACTGGGTTCAAACTCACTACTCTCCCTGCTTTCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR CAA 90 bp | TCATCGGTGACAATTCCCCACATTGATGAGTGGGAGAGATTAACATCAGAAAATGGGAGAGTAGTGAGTTaGAACCCAGTAAAATGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SSVTIPHIDEWERLTSENGRVVS*NPVKWK Trigger: CTTCCATTTTACTGGGTTCAAACTCACTACTCTCCC...ATTTTCTGATGTTAATCTCTCCCACTCATCAATGTGGGGAATTGTCACCGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR CAA 90 bp | AATGTCCCATGGTTCTATGAGTGGAAAATTCCACATTTGAGTGTGATGGGTTACGGGAGAGTAGTGAGTTaGAACCCAGTAAAATGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: NVPWFYEWKIPHLSVMGYGRVVS*NPVKWK Trigger: CTTCCATTTTACTGGGTTCAAACTCACTACTCTCCC...GTAACCCATCACACTCAAATGTGGAATTTTCCACTCATAGAACCATGGGACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR GCA 72 bp | TTTACAATGTACCCCCTCCCAAGTCTTACACTTGAATaGTTCTTTCCAAACCATATCAGGAGTATGTCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: FTMYPLPSLTLE*FFPNHIRSMSL Trigger: AAGGGACATACTCCTGATATGGTTTGGAAAGAAGCATTCAAGTGTAAGACTTGGGAGGGGGTACATTGTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR CCA 72 bp | CCATGCCACACATGTAGAGGTCAGCAAAACAATTTGTaGACTAGATTCTTTTCTTCTACTATGTGGGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: PCHTCRGQQNNL*TRFFSSTMWVS Trigger: TGAGACCCACATAGTAGAAGAAAAGAATCTAGTCCACAAATTGTTTTGCTGACCTCTACATGTGTGGCATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAAAAGGTATGTAGTGTTCCTGATGTACTAAGATTATATTaGTACAACACTGGGCTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: EKEKEKEKEKEKVCSVPDVLRLY*YNTGLG Trigger: TCCTAGCCCAGTGTTGTACAAATATAATCTTAGTAC...ATCAGGAACACTACATACCTTTTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCACAAAGCAACTTGCAGAAGTTGGTTTTCTTCCATATCCTGCATCCAGGACTGGTCAGCAAAACAATTaGTGGACTAGATTCTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: VTKQLAEVGFLPYPASRTGQQNN*WTRFFS Trigger: AGAAAAGAATCTAGTCCACAAATTGTTTTGCTGACC...AGTCCTGGATGCAGGATATGGAAGAAAACCAACTTCTGCAAGTTGCTTTGTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGGAAAGCAGGGAGAGTAGTGAGTTTGAACCCAGTAAAATGGAAGAGAGAACTGTACTAAGATTATATTaGTACAACACTGGGCTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: MESRESSEFEPSKMEERTVLRLY*YNTGLG Trigger: TCCTAGCCCAGTGTTGTACAAATATAATCTTAGTAC...AGTTCTCTCTTCCATTTTACTGGGTTCAAACTCACTACTCTCCCTGCTTTCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTTCTTTCCAAACCATATCAGGAGTATGTCCCTTCATTTTTCACTCATTTGAAAGTTTCTTCCTGGTaGGAGAAGTGGTTCAATCAG | + |
|
Preference number: 3 (lower is better) Translates to: MLLSKPYQEYVPSFFTHLKVSSW*EKWFNQ Trigger: CTGATTGAACCACTTCTCCAACCAGGAAGAAACTTT...CAAATGAGTGAAAAATGAAGGGACATACTCCTGATATGGTTTGGAAAGAAGCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR CCA 72 bp | AGTCTACCAAGTACTAAGATTATATTTGTACAACACTaGGCTAGGATTCACAGGAAGGGGTTAGATGAGATT | + |
|
Preference number: 3 (lower is better) Translates to: SLPSTKIIFVQH*ARIHRKGLDEI Trigger: AATCTCATCTAACCCCTTCCTGTGAATCCTAGCCCAGTGTTGTACAAATATAATCTTAGTACTTGGTAGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR TCA 72 bp | ATGAAAAGCAATAAAGCACTAATCTACATTACAGTGTaGGAGAATCCTGAAGACATGATGCTGTGTAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: MKSNKALIYITV*ENPEDMMLCRK Trigger: CTTCCTACACAGCATCATGTCTTCAGGATTCTCTCACACTGTAATGTAGATTAGTGCTTTATTGCTTTTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTTCTTTCCAAACCATATCAGGAGTATGTCCCTTCATTTTTCACTCATTTGTGCATTCCAGATTTTTaGTCTCTTGTTCTCCATGAA | + |
|
Preference number: 3 (lower is better) Translates to: MLLSKPYQEYVPSFFTHLCIPDF*SLVLHE Trigger: TTCATGGAGAACAAGAGACAAAAAATCTGGAATGCA...CAAATGAGTGAAAAATGAAGGGACATACTCCTGATATGGTTTGGAAAGAAGCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR TCA 72 bp | GATTTGATCTATCAATTGAGGATGTCCTTGAACTCATaGTTTTCTTATGCCCATTTCCCAAATGCTGAAATT | + |
|
Preference number: 3 (lower is better) Translates to: DLIYQLRMSLNS*FSYAHFPNAEI Trigger: AATTTCAGCATTTGGGAAATGGGCATAAGAAAATCATGAGTTCAAGGACATCCTCAATTGATAGATCAAATC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR CAA 72 bp | ACCCTAGTGAGGCAGAAACAGGATGATTCCTGGGACTaGCAGGTCAGCAAGCCGACCCTACTTGGTGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: TLVRQKQDDSWD*QVSKPTLLGES Trigger: GGATTCACCAAGTAGGGTCGGCTTGCTGACCTGCAAGTCCCAGGAATCATCCTGTTTCTGCCTCACTAGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| CDS-3UTR TCA 90 bp | GTCACAAAGCAACTTGCAGAAGTTGGTTTTCTTCCATATCCTGCATCCAGGACTAGCCACGGGGGCTCATaGGCACATTGTATCTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VTKQLAEVGFLPYPASRTSHGGS*AHCISV Trigger: CACTGAGATACAATGTGCTCATGAGCCCCCGTGGCT...AGTCCTGGATGCAGGATATGGAAGAAAACCAACTTCTGCAAGTTGCTTTGTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR CAA 72 bp | AGGTGCTGCCCATGGAAAGCAGGGAGAGTAGTGAGTTaGAACCCAGTAAAATGGAAGAGAGAACTGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RCCPWKAGRVVS*NPVKWKRELTP Trigger: TGGAGTCAGTTCTCTCTTCCATTTTACTGGGTTCAAACTCACTACTCTCCCTGCTTTCCATGGGCAGCACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| CDS-3UTR TCA 90 bp | GACAAAGGGAGAAGAGTAAAAGAATTTTTCCCTACTACACTCCCACTGGTAAGCAGCCACGGGGGCTCATaGGCACATTGTATCTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: DKGRRVKEFFPTTLPLVSSHGGS*AHCISV Trigger: CACTGAGATACAATGTGCTCATGAGCCCCCGTGGCT...GCTTACCAGTGGGAGTGTAGTAGGGAAAAATTCTTTTACTCTTCTCCCTTTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000112162.4 ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| CDS-3UTR TCA 90 bp | ATGGAAAGCAGGGAGAGTAGTGAGTTTGAACCCAGTAAAATGGAAGAGAGAACTAGCCACGGGGGCTCATaGGCACATTGTATCTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: MESRESSEFEPSKMEERTSHGGS*AHCISV Trigger: CACTGAGATACAATGTGCTCATGAGCCCCCGTGGCT...AGTTCTCTCTTCCATTTTACTGGGTTCAAACTCACTACTCTCCCTGCTTTCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| CDS-3UTR TCA 90 bp | AATGTCCCATGGTTCTATGAGTGGAAAATTCCACATTTGAGTGTGATGGGTTACAGCCACGGGGGCTCATaGGCACATTGTATCTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NVPWFYEWKIPHLSVMGYSHGGS*AHCISV Trigger: CACTGAGATACAATGTGCTCATGAGCCCCCGTGGCT...GTAACCCATCACACTCAAATGTGGAATTTTCCACTCATAGAACCATGGGACATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR CAA 72 bp | GGCAAGGGCAGGAGAATTTCTGAGTTTCAAGCTGGCTaGATTTATAGAGTGGGTTCCAGGACATCCAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GKGRRISEFQAG*IYRVGSRTSKV Trigger: AACCTTGGATGTCCTGGAACCCACTCTATAAATCAAGCCAGCTTGAAACTCAGAAATTCTCCTGCCCTTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| CDS-3UTR CCA 90 bp | GAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAAAAGGTATGTAGTGTTCCTGATACATGGCAGAAGAAATaGTGGATCTCATTGGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EKEKEKEKEKEKVCSVPDTWQKK*WISLGP Trigger: TGGACCCAATGAGATCCACCATTTCTTCTGCCATGT...ATCAGGAACACTACATACCTTTTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR CAA 72 bp | GAAACCATAATGAAGCTTCTGGGTACTAGCCATGAGTaGTGGTGCACAACTTTAATACCAGCACTAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ETIMKLLGTSHE*WCTTLIPALVR Trigger: CCTCACTAGTGCTGGTATTAAAGTTGTGCACCACAACTCATGGCTAGTACCCAGAAGCTTCATTATGGTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR CAA 72 bp | GTGCATGTGTGCACGTCACAAAGCAACTTGCAGAAGTaGGTTTTCTTCCATATCCTGCATCCAGGACTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VHVCTSQSNLQK*VFFHILHPGLK Trigger: TTTTAGTCCTGGATGCAGGATATGGAAGAAAACCAACTTCTGCAAGTTGCTTTGTGACGTGCACACATGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| CDS-3UTR GCA 90 bp | GTCACAAAGCAACTTGCAGAAGTTGGTTTTCTTCCATATCCTGCATCCAGGACTTATTCCTACACCCTTTaGCACCTCCAATACATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VTKQLAEVGFLPYPASRTYSYTL*HLQYIL Trigger: GAGAATGTATTGGAGGTGGCAAAGGGTGTAGGAATA...AGTCCTGGATGCAGGATATGGAAGAAAACCAACTTCTGCAAGTTGCTTTGTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| CDS-3UTR CCA 90 bp | GACAAAGGGAGAAGAGTAAAAGAATTTTTCCCTACTACACTCCCACTGGTAAGCACATGGCAGAAGAAATaGTGGATCTCATTGGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DKGRRVKEFFPTTLPLVSTWQKK*WISLGP Trigger: TGGACCCAATGAGATCCACCATTTCTTCTGCCATGT...GCTTACCAGTGGGAGTGTAGTAGGGAAAAATTCTTTTACTCTTCTCCCTTTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000112162.4 ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| CDS-3UTR GCA 90 bp | GACAAAGGGAGAAGAGTAAAAGAATTTTTCCCTACTACACTCCCACTGGTAAGCTATTCCTACACCCTTTaGCACCTCCAATACATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: DKGRRVKEFFPTTLPLVSYSYTL*HLQYIL Trigger: GAGAATGTATTGGAGGTGGCAAAGGGTGTAGGAATA...GCTTACCAGTGGGAGTGTAGTAGGGAAAAATTCTTTTACTCTTCTCCCTTTGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000112162.4 ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| CDS-3UTR GCA 90 bp | TGGAATGTCCCATGGTTCTATGAGTGGAAAATTCCACATTTGAGTGTGATGGGTTATTCCTACACCCTTTaGCACCTCCAATACATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: WNVPWFYEWKIPHLSVMGYSYTL*HLQYIL Trigger: GAGAATGTATTGGAGGTGGCAAAGGGTGTAGGAATA...ACCCATCACACTCAAATGTGGAATTTTCCACTCATAGAACCATGGGACATTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| CDS-3UTR CCA 90 bp | ACACACACACACACACAAGCTATGAAGACATACATTCCCACAAAAACTGTGCATACATGGCAGAAGAAATaGTGGATCTCATTGGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: THTHTQAMKTYIPTKTVHTWQKK*WISLGP Trigger: TGGACCCAATGAGATCCACCATTTCTTCTGCCATGT...ATGCACAGTTTTTGTGGGAATGTATGTCTTCATAGCTTGTGTGTGTGTGTGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| CDS-3UTR CCA 90 bp | TCATTATGTAGCCCAGGTATGCCTTTACCTCACAGTATAATTGAGGTTGGTCTTACATGGCAGAAGAAATaGTGGATCTCATTGGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLCSPGMPLPHSIIEVGLTWQKK*WISLGP Trigger: TGGACCCAATGAGATCCACCATTTCTTCTGCCATGT...AAGACCAACCTCAATTATACTGTGAGGTAAAGGCATACCTGGGCTACATAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| CDS-3UTR CCA 90 bp | GACAAAGGGAGAAGAGTAAAAGAATTTTTCCCTACTACACTCCCACTGGTAAGCAATAGAGGTGGAACATaGCAGAAGAAATGGTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: DKGRRVKEFFPTTLPLVSNRGGT*QKKWWI Trigger: GATCCACCATTTCTTCTGCCATGTTCCACCTCTATT...GCTTACCAGTGGGAGTGTAGTAGGGAAAAATTCTTTTACTCTTCTCCCTTTGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000112162.4 ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR CAA 72 bp | ATGCCATGCCACACATGTAGAGGTCAGCAAAACAATTaGTGGACTAGATTCTTTTCTTCTACTATGTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: MPCHTCRGQQNN*WTRFFSSTMWV Trigger: GACCCACATAGTAGAAGAAAAGAATCTAGTCCACAAATTGTTTTGCTGACCTCTACATGTGTGGCATGGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| CDS-3UTR GCA 90 bp | ACACACACACACACACAAGCTATGAAGACATACATTCCCACAAAAACTGTGCATTATTCCTACACCCTTTaGCACCTCCAATACATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: THTHTQAMKTYIPTKTVHYSYTL*HLQYIL Trigger: GAGAATGTATTGGAGGTGGCAAAGGGTGTAGGAATA...ATGCACAGTTTTTGTGGGAATGTATGTCTTCATAGCTTGTGTGTGTGTGTGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| CDS-3UTR GCA 90 bp | AATGTCCCATGGTTCTATGAGTGGAAAATTCCACATTTGAGTGTGATGGGTTACTATTCCTACACCCTTTaGCACCTCCAATACATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NVPWFYEWKIPHLSVMGYYSYTL*HLQYIL Trigger: GAGAATGTATTGGAGGTGGCAAAGGGTGTAGGAATA...GTAACCCATCACACTCAAATGTGGAATTTTCCACTCATAGAACCATGGGACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR CAA 72 bp | TATCGTGTTTCAGTCTACCAAGTACTAAGATTATATTaGTACAACACTGGGCTAGGATTCACAGGAAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: YRVSVYQVLRLY*YNTGLGFTGRG Trigger: ACCCCTTCCTGTGAATCCTAGCCCAGTGTTGTACAAATATAATCTTAGTACTTGGTAGACTGAAACACGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
||
| 3UTR CAA 72 bp | TTACATTTACAATGTACCCCCTCCCAAGTCTTACACTaGAATGCTTCTTTCCAAACCATATCAGGAGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: LHLQCTPSQVLH*NASFQTISGVC Trigger: ACATACTCCTGATATGGTTTGGAAAGAAGCATTCAAGTGTAAGACTTGGGAGGGGGTACATTGTAAATGTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| 3UTR CAA 72 bp | AATGTCCCATGGTTCTATGAGTGGAAAATTCCACATTaGAGTGTGATGGGTTACATAGACCAAATGGAATTA | + |
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Preference number: 4 (lower is better) Translates to: NVPWFYEWKIPH*SVMGYIDQMEL Trigger: TAATTCCATTTGGTCTATGTAACCCATCACACTCAAATGTGGAATTTTCCACTCATAGAACCATGGGACATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| CDS-3UTR CAA 90 bp | CCAACCCTAGTGAGGCAGAAACAGGATGATTCCTGGGACTTGCAGGTCAGCAAGCATGTGGAGAAAGCCTaGTGCCGACCCTCAGCTGAT | + |
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Preference number: 5 (lower is better) Translates to: PTLVRQKQDDSWDLQVSKHVEKA*CRPSAD Trigger: ATCAGCTGAGGGTCGGCACAAGGCTTTCTCCACATG...CTTGCTGACCTGCAAGTCCCAGGAATCATCCTGTTTCTGCCTCACTAGGGTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| CDS-3UTR CAA 90 bp | GAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAAAAGGTATGTAGTGTTCCTGATCATGTGGAGAAAGCCTaGTGCCGACCCTCAGCTGAT | + |
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Preference number: 5 (lower is better) Translates to: EKEKEKEKEKEKVCSVPDHVEKA*CRPSAD Trigger: ATCAGCTGAGGGTCGGCACAAGGCTTTCTCCACATG...ATCAGGAACACTACATACCTTTTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| CDS-3UTR CAA 90 bp | GACAAAGGGAGAAGAGTAAAAGAATTTTTCCCTACTACACTCCCACTGGTAAGCCATGTGGAGAAAGCCTaGTGCCGACCCTCAGCTGAT | + |
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Preference number: 5 (lower is better) Translates to: DKGRRVKEFFPTTLPLVSHVEKA*CRPSAD Trigger: ATCAGCTGAGGGTCGGCACAAGGCTTTCTCCACATG...GCTTACCAGTGGGAGTGTAGTAGGGAAAAATTCTTTTACTCTTCTCCCTTTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000112162.4 ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| CDS-3UTR CAA 90 bp | TCATTATGTAGCCCAGGTATGCCTTTACCTCACAGTATAATTGAGGTTGGTCTTCATGTGGAGAAAGCCTaGTGCCGACCCTCAGCTGAT | + |
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Preference number: 5 (lower is better) Translates to: SLCSPGMPLPHSIIEVGLHVEKA*CRPSAD Trigger: ATCAGCTGAGGGTCGGCACAAGGCTTTCTCCACATG...AAGACCAACCTCAATTATACTGTGAGGTAAAGGCATACCTGGGCTACATAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| CDS-3UTR CAA 90 bp | AATGTCCCATGGTTCTATGAGTGGAAAATTCCACATTTGAGTGTGATGGGTTACCATGTGGAGAAAGCCTaGTGCCGACCCTCAGCTGAT | + |
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Preference number: 5 (lower is better) Translates to: NVPWFYEWKIPHLSVMGYHVEKA*CRPSAD Trigger: ATCAGCTGAGGGTCGGCACAAGGCTTTCTCCACATG...GTAACCCATCACACTCAAATGTGGAATTTTCCACTCATAGAACCATGGGACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| CDS-3UTR CAA 90 bp | GTCACAAAGCAACTTGCAGAAGTTGGTTTTCTTCCATATCCTGCATCCAGGACTCCACAGAATGTGAGGTaGAAAATGGCTGTTGTCACC | + |
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Preference number: 5 (lower is better) Translates to: VTKQLAEVGFLPYPASRTPQNVR*KMAVVT Trigger: GGTGACAACAGCCATTTTCAACCTCACATTCTGTGG...AGTCCTGGATGCAGGATATGGAAGAAAACCAACTTCTGCAAGTTGCTTTGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| CDS-3UTR CAA 90 bp | GACAAAGGGAGAAGAGTAAAAGAATTTTTCCCTACTACACTCCCACTGGTAAGCCCACAGAATGTGAGGTaGAAAATGGCTGTTGTCACC | + |
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Preference number: 5 (lower is better) Translates to: DKGRRVKEFFPTTLPLVSPQNVR*KMAVVT Trigger: GGTGACAACAGCCATTTTCAACCTCACATTCTGTGG...GCTTACCAGTGGGAGTGTAGTAGGGAAAAATTCTTTTACTCTTCTCCCTTTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000112162.4 ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| CDS-3UTR CAA 90 bp | GAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAAAAGGTATGTAGTGTTCCTGATCTATTCCTACACCCTTaGCCACCTCCAATACATTCT | + |
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Preference number: 5 (lower is better) Translates to: EKEKEKEKEKEKVCSVPDLFLHP*PPPIHS Trigger: AGAATGTATTGGAGGTGGCAAAGGGTGTAGGAATAG...ATCAGGAACACTACATACCTTTTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| CDS-3UTR CAA 90 bp | ACACACACACACACACAAGCTATGAAGACATACATTCCCACAAAAACTGTGCATCCACAGAATGTGAGGTaGAAAATGGCTGTTGTCACC | + |
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Preference number: 5 (lower is better) Translates to: THTHTQAMKTYIPTKTVHPQNVR*KMAVVT Trigger: GGTGACAACAGCCATTTTCAACCTCACATTCTGTGG...ATGCACAGTTTTTGTGGGAATGTATGTCTTCATAGCTTGTGTGTGTGTGTGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| CDS-3UTR CAA 90 bp | TCATCGGTGACAATTCCCCACATTGATGAGTGGGAGAGATTAACATCAGAAAATCCACAGAATGTGAGGTaGAAAATGGCTGTTGTCACC | + |
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Preference number: 5 (lower is better) Translates to: SSVTIPHIDEWERLTSENPQNVR*KMAVVT Trigger: GGTGACAACAGCCATTTTCAACCTCACATTCTGTGG...ATTTTCTGATGTTAATCTCTCCCACTCATCAATGTGGGGAATTGTCACCGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| CDS-3UTR CAA 90 bp | GACAAAGGGAGAAGAGTAAAAGAATTTTTCCCTACTACACTCCCACTGGTAAGCCTATTCCTACACCCTTaGCCACCTCCAATACATTCT | + |
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Preference number: 5 (lower is better) Translates to: DKGRRVKEFFPTTLPLVSLFLHP*PPPIHS Trigger: AGAATGTATTGGAGGTGGCAAAGGGTGTAGGAATAG...GCTTACCAGTGGGAGTGTAGTAGGGAAAAATTCTTTTACTCTTCTCCCTTTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000112162.4 ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| CDS-3UTR CAA 90 bp | AATGTCCCATGGTTCTATGAGTGGAAAATTCCACATTTGAGTGTGATGGGTTACCTATTCCTACACCCTTaGCCACCTCCAATACATTCT | + |
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Preference number: 5 (lower is better) Translates to: NVPWFYEWKIPHLSVMGYLFLHP*PPPIHS Trigger: AGAATGTATTGGAGGTGGCAAAGGGTGTAGGAATAG...GTAACCCATCACACTCAAATGTGGAATTTTCCACTCATAGAACCATGGGACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| CDS-3UTR CAA 90 bp | ATGCTTCTTTCCAAACCATATCAGGAGTATGTCCCTTCATTTTTCACTCATTTGCCACAGAATGTGAGGTaGAAAATGGCTGTTGTCACC | + |
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Preference number: 5 (lower is better) Translates to: MLLSKPYQEYVPSFFTHLPQNVR*KMAVVT Trigger: GGTGACAACAGCCATTTTCAACCTCACATTCTGTGG...CAAATGAGTGAAAAATGAAGGGACATACTCCTGATATGGTTTGGAAAGAAGCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| CDS-3UTR CAA 90 bp | ATGCTTCTTTCCAAACCATATCAGGAGTATGTCCCTTCATTTTTCACTCATTTGCTATTCCTACACCCTTaGCCACCTCCAATACATTCT | + |
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Preference number: 5 (lower is better) Translates to: MLLSKPYQEYVPSFFTHLLFLHP*PPPIHS Trigger: AGAATGTATTGGAGGTGGCAAAGGGTGTAGGAATAG...CAAATGAGTGAAAAATGAAGGGACATACTCCTGATATGGTTTGGAAAGAAGCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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| CDS GCA 72 bp | CAGGAGGGCTGTGATGCACACTATTCCTACACCCTTTaGCACCTCCAATACATTCTCTCCACATGCCAACTT | + |
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Preference number: 6 (lower is better) Translates to: QEGCDAHYSYTL*HLQYILSTCQL Trigger: AAGTTGGCATGTGGAGAGAATGTATTGGAGGTGGCAAAGGGTGTAGGAATAGTGTGCATCACAGCCCTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000112162.4 ENSMUST00000208645.3 ENSMUST00000213642.2 ENSMUST00000213751.2 ENSMUST00000215450.2 |
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