Pregenerated sensors for OLFR156 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000110970Ensembl transcript IDs: ENSMUST00000079234.6, ENSMUST00000079465.5, ENSMUST00000214843.2, ENSMUST00000215406.2
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGTCCAGACTGATCTTCAGGGCTAGCCATCAAGGCTATGCTGAATaGTTGACCATTCCCAGCCAAGCCCTGTGTGCACTGAACGGGGAA | + |
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Preference number: 1 (lower is better) Translates to: QSRLIFRASHQGYAE*LTIPSQALCALNGE Trigger: TTCCCCGTTCAGTGCACACAGGGCTTGGCTGGGAATGGTCAATCATTCAGCATAGCCTTGATGGCTAGCCCTGAAGATCAGTCTGGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079234.6 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAGTCACTCACGAAGAACTCAGTCCAGACTGATCTTCAGGGCTAGCCATCAAGCTATGCTGAATGATTaGCCATTCCCAGCCAAGCCC | + |
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Preference number: 2 (lower is better) Translates to: PSHSRRTQSRLIFRASHQAMLND*PFPAKP Trigger: GGGCTTGGCTGGGAATGGTCAATCATTCAGCATAGC...TTGATGGCTAGCCCTGAAGATCAGTCTGGACTGAGTTCTTCGTGAGTGACTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079234.6 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| 3UTR-3UTR GCA 90 bp | AGGATATTTTGTACAACCAGTGTCTTGATTCTAAAGAGTCCATGGTCCAGCCCACAGCCAAGCCCTGTGTaGACTGAACGGGGAAGTAAC | + |
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Preference number: 2 (lower is better) Translates to: RIFCTTSVLILKSPWSSPQPSPV*TERGSN Trigger: GTTACTTCCCCGTTCAGTGCACACAGGGCTTGGCTG...TGGGCTGGACCATGGACTCTTTAGAATCAAGACACTGGTTGTACAAAATATCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079234.6 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| 3UTR-3UTR GCA 90 bp | GATATTTTGTACAACCAGTGTCTTGATTCTAAAGAGTCCATGGTCCAGCCCAGTCAGCCAAGCCCTGTGTaGACTGAACGGGGAAGTAAC | + |
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Preference number: 2 (lower is better) Translates to: DILYNQCLDSKESMVQPSQPSPV*TERGSN Trigger: GTTACTTCCCCGTTCAGTGCACACAGGGCTTGGCTG...ACTGGGCTGGACCATGGACTCTTTAGAATCAAGACACTGGTTGTACAAAATATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079234.6 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| 3UTR-3UTR TCA 90 bp | GATATTTTGTACAACCAGTGTCTTGATTCTAAAGAGTCCATGGTCCAGCCCAGTGAACTCAGTCCAGACTaGTCTTCAGGGCTAGCCATC | + |
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Preference number: 2 (lower is better) Translates to: DILYNQCLDSKESMVQPSELSPD*SSGLAI Trigger: GATGGCTAGCCCTGAAGATCAGTCTGGACTGAGTTC...ACTGGGCTGGACCATGGACTCTTTAGAATCAAGACACTGGTTGTACAAAATATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079234.6 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| CDS-3UTR TCA 90 bp | CCCAGCCAAGCCCTGTGTGCACTGAACGGGGAAGTAACCCACTTCCTTCCTCACCAGCCACCCAGGAGCTaGCGGCCATGGGCACATAGG | + |
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Preference number: 4 (lower is better) Translates to: PSQALCALNGEVTHFLPHQPPRS*RPWAHR Trigger: CCTATGTGCCCATGGCCGTCAGCTCCTGGGTGGCTG...GTGAGGAAGGAAGTGGGTTACTTCCCCGTTCAGTGCACACAGGGCTTGGCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079234.6 ENSMUST00000079465.5 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| CDS-3UTR TCA 90 bp | CCCAGCCAAGCCCTGTGTGCACTGAACGGGGAAGTAACCCACTTCCTTCCTCACGGATGCTCACCAGGATaGGGACGCCGTTGCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: PSQALCALNGEVTHFLPHGCSPG*GRRCPA Trigger: TGCTGGGCAACGGCGTCCTCATCCTGGTGAGCATCC...GTGAGGAAGGAAGTGGGTTACTTCCCCGTTCAGTGCACACAGGGCTTGGCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079234.6 ENSMUST00000079465.5 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| CDS-3UTR TCA 90 bp | TCCCAGCCAAGCCCTGTGTGCACTGAACGGGGAAGTAACCCACTTCCTTCCTCACAGCCACCCAGGAGCTaGCGGCCATGGGCACATAGG | + |
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Preference number: 4 (lower is better) Translates to: SQPSPVCTERGSNPLPSSQPPRS*RPWAHR Trigger: CCTATGTGCCCATGGCCGTCAGCTCCTGGGTGGCTG...TGAGGAAGGAAGTGGGTTACTTCCCCGTTCAGTGCACACAGGGCTTGGCTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079234.6 ENSMUST00000079465.5 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| CDS-3UTR TCA 90 bp | CATTCCCAGCCAAGCCCTGTGTGCACTGAACGGGGAAGTAACCCACTTCCTTCCGGATGCTCACCAGGATaGGGACGCCGTTGCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: HSQPSPVCTERGSNPLPSGCSPG*GRRCPA Trigger: TGCTGGGCAACGGCGTCCTCATCCTGGTGAGCATCC...GGAAGGAAGTGGGTTACTTCCCCGTTCAGTGCACACAGGGCTTGGCTGGGAATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079234.6 ENSMUST00000079465.5 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| CDS-3UTR TCA 90 bp | CAGCCAAGCCCTGTGTGCACTGAACGGGGAAGTAACCCACTTCCTTCCTCACTACAGCCACCCAGGAGCTaGCGGCCATGGGCACATAGG | + |
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Preference number: 4 (lower is better) Translates to: QPSPVCTERGSNPLPSSLQPPRS*RPWAHR Trigger: CCTATGTGCCCATGGCCGTCAGCTCCTGGGTGGCTG...TAGTGAGGAAGGAAGTGGGTTACTTCCCCGTTCAGTGCACACAGGGCTTGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079234.6 ENSMUST00000079465.5 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| CDS-3UTR TCA 90 bp | ATTGACCATTCCCAGCCAAGCCCTGTGTGCACTGAACGGGGAAGTAACCCACTTCAGCCACCCAGGAGCTaGCGGCCATGGGCACATAGG | + |
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Preference number: 4 (lower is better) Translates to: IDHSQPSPVCTERGSNPLQPPRS*RPWAHR Trigger: CCTATGTGCCCATGGCCGTCAGCTCCTGGGTGGCTG...AAGTGGGTTACTTCCCCGTTCAGTGCACACAGGGCTTGGCTGGGAATGGTCAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079234.6 ENSMUST00000079465.5 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| CDS-3UTR CCA 90 bp | GACCATTCCCAGCCAAGCCCTGTGTGCACTGAACGGGGAAGTAACCCACTTCCTATGGGCGTGTGCAGGTaGGAGTCGAGGATGCTCACC | + |
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Preference number: 4 (lower is better) Translates to: DHSQPSPVCTERGSNPLPMGVCR*ESRMLT Trigger: GGTGAGCATCCTCGACTCCCACCTGCACACGCCCAT...AGGAAGTGGGTTACTTCCCCGTTCAGTGCACACAGGGCTTGGCTGGGAATGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079234.6 ENSMUST00000079465.5 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| CDS-3UTR TCA 90 bp | ATTGACCATTCCCAGCCAAGCCCTGTGTGCACTGAACGGGGAAGTAACCCACTTGGATGCTCACCAGGATaGGGACGCCGTTGCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: IDHSQPSPVCTERGSNPLGCSPG*GRRCPA Trigger: TGCTGGGCAACGGCGTCCTCATCCTGGTGAGCATCC...AAGTGGGTTACTTCCCCGTTCAGTGCACACAGGGCTTGGCTGGGAATGGTCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079234.6 ENSMUST00000079465.5 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| CDS-3UTR TCA 90 bp | CATTCCCAGCCAAGCCCTGTGTGCACTGAACGGGGAAGTAACCCACTTCCTTCCAGACAAGTACCACGGTaGGGTGGGCAGAACAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: HSQPSPVCTERGSNPLPSRQVPR*GGQNRW Trigger: CCACCTGTTCTGCCCACCTCACCGTGGTACTTGTCT...GGAAGGAAGTGGGTTACTTCCCCGTTCAGTGCACACAGGGCTTGGCTGGGAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079234.6 ENSMUST00000079465.5 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| CDS-3UTR CCA 90 bp | TTGACCATTCCCAGCCAAGCCCTGTGTGCACTGAACGGGGAAGTAACCCACTTCATGGGCGTGTGCAGGTaGGAGTCGAGGATGCTCACC | + |
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Preference number: 4 (lower is better) Translates to: LTIPSQALCALNGEVTHFMGVCR*ESRMLT Trigger: GGTGAGCATCCTCGACTCCCACCTGCACACGCCCAT...GAAGTGGGTTACTTCCCCGTTCAGTGCACACAGGGCTTGGCTGGGAATGGTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079234.6 ENSMUST00000079465.5 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| CDS-3UTR CCA 90 bp | CAGCCAAGCCCTGTGTGCACTGAACGGGGAAGTAACCCACTTCCTTCCTCACTAATGGGCGTGTGCAGGTaGGAGTCGAGGATGCTCACC | + |
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Preference number: 4 (lower is better) Translates to: QPSPVCTERGSNPLPSSLMGVCR*ESRMLT Trigger: GGTGAGCATCCTCGACTCCCACCTGCACACGCCCAT...TAGTGAGGAAGGAAGTGGGTTACTTCCCCGTTCAGTGCACACAGGGCTTGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079234.6 ENSMUST00000079465.5 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| CDS-3UTR GCA 90 bp | TCCCAGCCAAGCCCTGTGTGCACTGAACGGGGAAGTAACCCACTTCCTTCCTCAACCGCAAGGGAGATCTaGACCAAGGAGTTAGCACCG | + |
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Preference number: 4 (lower is better) Translates to: SQPSPVCTERGSNPLPSSTAREI*TKELAP Trigger: CGGTGCTAACTCCTTGGTGCAGATCTCCCTTGCGGT...TGAGGAAGGAAGTGGGTTACTTCCCCGTTCAGTGCACACAGGGCTTGGCTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079234.6 ENSMUST00000079465.5 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| CDS-3UTR TCA 90 bp | TGTACAACCAGTGTCTTGATTCTAAAGAGTCCATGGTCCAGCCCAGTCACTCACGGATGCTCACCAGGATaGGGACGCCGTTGCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: CTTSVLILKSPWSSPVTHGCSPG*GRRCPA Trigger: TGCTGGGCAACGGCGTCCTCATCCTGGTGAGCATCC...GTGAGTGACTGGGCTGGACCATGGACTCTTTAGAATCAAGACACTGGTTGTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079234.6 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| CDS-3UTR TCA 90 bp | ACCATTCCCAGCCAAGCCCTGTGTGCACTGAACGGGGAAGTAACCCACTTCCTTTGGTCTTCCTGGGGGTaGGAAAACCATCCAGGACTA | + |
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Preference number: 4 (lower is better) Translates to: TIPSQALCALNGEVTHFLWSSWG*ENHPGL Trigger: TAGTCCTGGATGGTTTTCTCACCCCCAGGAAGACCA...AAGGAAGTGGGTTACTTCCCCGTTCAGTGCACACAGGGCTTGGCTGGGAATGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000079234.6 ENSMUST00000079465.5 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| CDS-3UTR TCA 90 bp | CCCAGTCACTCACGAAGAACTCAGTCCAGACTGATCTTCAGGGCTAGCCATCAAAGACAAGTACCACGGTaGGGTGGGCAGAACAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: PSHSRRTQSRLIFRASHQRQVPR*GGQNRW Trigger: CCACCTGTTCTGCCCACCTCACCGTGGTACTTGTCT...TTGATGGCTAGCCCTGAAGATCAGTCTGGACTGAGTTCTTCGTGAGTGACTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079234.6 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| CDS-3UTR TCA 90 bp | TGTACAACCAGTGTCTTGATTCTAAAGAGTCCATGGTCCAGCCCAGTCACTCACAGACAAGTACCACGGTaGGGTGGGCAGAACAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: CTTSVLILKSPWSSPVTHRQVPR*GGQNRW Trigger: CCACCTGTTCTGCCCACCTCACCGTGGTACTTGTCT...GTGAGTGACTGGGCTGGACCATGGACTCTTTAGAATCAAGACACTGGTTGTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079234.6 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| CDS-3UTR CCA 90 bp | AGGATATTTTGTACAACCAGTGTCTTGATTCTAAAGAGTCCATGGTCCAGCCCAATGGGCGTGTGCAGGTaGGAGTCGAGGATGCTCACC | + |
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Preference number: 4 (lower is better) Translates to: RIFCTTSVLILKSPWSSPMGVCR*ESRMLT Trigger: GGTGAGCATCCTCGACTCCCACCTGCACACGCCCAT...TGGGCTGGACCATGGACTCTTTAGAATCAAGACACTGGTTGTACAAAATATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079234.6 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| CDS-3UTR TCA 90 bp | GACCATTCCCAGCCAAGCCCTGTGTGCACTGAACGGGGAAGTAACCCACTTCCTCATAAAATAAGGAGATaGGCTTGTCTGAAACATCCT | + |
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Preference number: 4 (lower is better) Translates to: DHSQPSPVCTERGSNPLPHKIRR*ACLKHP Trigger: AGGATGTTTCAGACAAGCTCATCTCCTTATTTTATG...AGGAAGTGGGTTACTTCCCCGTTCAGTGCACACAGGGCTTGGCTGGGAATGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079234.6 ENSMUST00000079465.5 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| CDS-3UTR TCA 90 bp | ACCATTCCCAGCCAAGCCCTGTGTGCACTGAACGGGGAAGTAACCCACTTCCTTCATAAAATAAGGAGATaGGCTTGTCTGAAACATCCT | + |
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Preference number: 4 (lower is better) Translates to: TIPSQALCALNGEVTHFLHKIRR*ACLKHP Trigger: AGGATGTTTCAGACAAGCTCATCTCCTTATTTTATG...AAGGAAGTGGGTTACTTCCCCGTTCAGTGCACACAGGGCTTGGCTGGGAATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079234.6 ENSMUST00000079465.5 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| CDS-3UTR TCA 90 bp | ATTCCCAGCCAAGCCCTGTGTGCACTGAACGGGGAAGTAACCCACTTCCTTCCTCATAAAATAAGGAGATaGGCTTGTCTGAAACATCCT | + |
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Preference number: 4 (lower is better) Translates to: IPSQALCALNGEVTHFLPHKIRR*ACLKHP Trigger: AGGATGTTTCAGACAAGCTCATCTCCTTATTTTATG...AGGAAGGAAGTGGGTTACTTCCCCGTTCAGTGCACACAGGGCTTGGCTGGGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079234.6 ENSMUST00000079465.5 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| CDS-3UTR GCA 90 bp | GATATTTTGTACAACCAGTGTCTTGATTCTAAAGAGTCCATGGTCCAGCCCAGTACCGCAAGGGAGATCTaGACCAAGGAGTTAGCACCG | + |
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Preference number: 4 (lower is better) Translates to: DILYNQCLDSKESMVQPSTAREI*TKELAP Trigger: CGGTGCTAACTCCTTGGTGCAGATCTCCCTTGCGGT...ACTGGGCTGGACCATGGACTCTTTAGAATCAAGACACTGGTTGTACAAAATATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079234.6 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| CDS-3UTR GCA 90 bp | AGGATATTTTGTACAACCAGTGTCTTGATTCTAAAGAGTCCATGGTCCAGCCCAACCGCAAGGGAGATCTaGACCAAGGAGTTAGCACCG | + |
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Preference number: 4 (lower is better) Translates to: RIFCTTSVLILKSPWSSPTAREI*TKELAP Trigger: CGGTGCTAACTCCTTGGTGCAGATCTCCCTTGCGGT...TGGGCTGGACCATGGACTCTTTAGAATCAAGACACTGGTTGTACAAAATATCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079234.6 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| 3UTR CAA 72 bp | TTTCTTGGTTCTAGGATATTTTGTACAACCAGTGTCTaGATTCTAAAGAGTCCATGGTCCAGCCCAGTCACT | + |
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Preference number: 4 (lower is better) Translates to: FLGSRIFCTTSV*ILKSPWSSPVT Trigger: AGTGACTGGGCTGGACCATGGACTCTTTAGAATCAAGACACTGGTTGTACAAAATATCCTAGAACCAAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079234.6 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| CDS-3UTR TCA 90 bp | GATATTTTGTACAACCAGTGTCTTGATTCTAAAGAGTCCATGGTCCAGCCCAGTCATAAAATAAGGAGATaGGCTTGTCTGAAACATCCT | + |
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Preference number: 4 (lower is better) Translates to: DILYNQCLDSKESMVQPSHKIRR*ACLKHP Trigger: AGGATGTTTCAGACAAGCTCATCTCCTTATTTTATG...ACTGGGCTGGACCATGGACTCTTTAGAATCAAGACACTGGTTGTACAAAATATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079234.6 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| CDS-3UTR CAA 90 bp | CATTCCCAGCCAAGCCCTGTGTGCACTGAACGGGGAAGTAACCCACTTCCTTCCAATGGGTCCTTGGACTaGGGCTTCCCGTACATGAAC | + |
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Preference number: 5 (lower is better) Translates to: HSQPSPVCTERGSNPLPSNGSLD*GFPYMN Trigger: GTTCATGTACGGGAAGCCCAAGTCCAAGGACCCATT...GGAAGGAAGTGGGTTACTTCCCCGTTCAGTGCACACAGGGCTTGGCTGGGAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079234.6 ENSMUST00000079465.5 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| CDS-3UTR CAA 90 bp | GACCATTCCCAGCCAAGCCCTGTGTGCACTGAACGGGGAAGTAACCCACTTCCTAATGGGTCCTTGGACTaGGGCTTCCCGTACATGAAC | + |
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Preference number: 5 (lower is better) Translates to: DHSQPSPVCTERGSNPLPNGSLD*GFPYMN Trigger: GTTCATGTACGGGAAGCCCAAGTCCAAGGACCCATT...AGGAAGTGGGTTACTTCCCCGTTCAGTGCACACAGGGCTTGGCTGGGAATGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079234.6 ENSMUST00000079465.5 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| CDS-3UTR CAA 90 bp | TTGACCATTCCCAGCCAAGCCCTGTGTGCACTGAACGGGGAAGTAACCCACTTCAATGGGTCCTTGGACTaGGGCTTCCCGTACATGAAC | + |
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Preference number: 5 (lower is better) Translates to: LTIPSQALCALNGEVTHFNGSLD*GFPYMN Trigger: GTTCATGTACGGGAAGCCCAAGTCCAAGGACCCATT...GAAGTGGGTTACTTCCCCGTTCAGTGCACACAGGGCTTGGCTGGGAATGGTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079234.6 ENSMUST00000079465.5 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| CDS-3UTR CAA 90 bp | ATTCCCAGCCAAGCCCTGTGTGCACTGAACGGGGAAGTAACCCACTTCCTTCCTTCTGAAACATCCTGTTaGTCTGCCCCCAATGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: IPSQALCALNGEVTHFLPSETSC*SAPNGS Trigger: GGACCCATTGGGGGCAGACAAACAGGATGTTTCAGA...AGGAAGGAAGTGGGTTACTTCCCCGTTCAGTGCACACAGGGCTTGGCTGGGAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000079234.6 ENSMUST00000079465.5 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| CDS-3UTR CAA 90 bp | CAGCCAAGCCCTGTGTGCACTGAACGGGGAAGTAACCCACTTCCTTCCTCACTATCTGAAACATCCTGTTaGTCTGCCCCCAATGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: QPSPVCTERGSNPLPSSLSETSC*SAPNGS Trigger: GGACCCATTGGGGGCAGACAAACAGGATGTTTCAGA...TAGTGAGGAAGGAAGTGGGTTACTTCCCCGTTCAGTGCACACAGGGCTTGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000079234.6 ENSMUST00000079465.5 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| CDS-3UTR CAA 90 bp | ATTCCCAGCCAAGCCCTGTGTGCACTGAACGGGGAAGTAACCCACTTCCTTCCTAATAAGGAGATGAGCTaGTCTGAAACATCCTGTTTG | + |
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Preference number: 5 (lower is better) Translates to: IPSQALCALNGEVTHFLPNKEMS*SETSCL Trigger: CAAACAGGATGTTTCAGACAAGCTCATCTCCTTATT...AGGAAGGAAGTGGGTTACTTCCCCGTTCAGTGCACACAGGGCTTGGCTGGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079234.6 ENSMUST00000079465.5 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| CDS-3UTR CAA 90 bp | ACCATTCCCAGCCAAGCCCTGTGTGCACTGAACGGGGAAGTAACCCACTTCCTTAATAAGGAGATGAGCTaGTCTGAAACATCCTGTTTG | + |
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Preference number: 5 (lower is better) Translates to: TIPSQALCALNGEVTHFLNKEMS*SETSCL Trigger: CAAACAGGATGTTTCAGACAAGCTCATCTCCTTATT...AAGGAAGTGGGTTACTTCCCCGTTCAGTGCACACAGGGCTTGGCTGGGAATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079234.6 ENSMUST00000079465.5 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| CDS-3UTR CAA 90 bp | ATTGACCATTCCCAGCCAAGCCCTGTGTGCACTGAACGGGGAAGTAACCCACTTAATAAGGAGATGAGCTaGTCTGAAACATCCTGTTTG | + |
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Preference number: 5 (lower is better) Translates to: IDHSQPSPVCTERGSNPLNKEMS*SETSCL Trigger: CAAACAGGATGTTTCAGACAAGCTCATCTCCTTATT...AAGTGGGTTACTTCCCCGTTCAGTGCACACAGGGCTTGGCTGGGAATGGTCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079234.6 ENSMUST00000079465.5 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| CDS-3UTR CAA 90 bp | AGGATATTTTGTACAACCAGTGTCTTGATTCTAAAGAGTCCATGGTCCAGCCCAAATAAGGAGATGAGCTaGTCTGAAACATCCTGTTTG | + |
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Preference number: 5 (lower is better) Translates to: RIFCTTSVLILKSPWSSPNKEMS*SETSCL Trigger: CAAACAGGATGTTTCAGACAAGCTCATCTCCTTATT...TGGGCTGGACCATGGACTCTTTAGAATCAAGACACTGGTTGTACAAAATATCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079234.6 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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| CDS GCA 72 bp | TCCCCACAGAAAGGCAACTGCACCGCAAGGGAGATCTaGACCAAGGAGTTAGCACCGCCAGCCACCCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: SPQKGNCTAREI*TKELAPPATQE Trigger: CTCCTGGGTGGCTGGCGGTGCTAACTCCTTGGTGCAGATCTCCCTTGCGGTGCAGTTGCCTTTCTGTGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079234.6 ENSMUST00000079465.5 ENSMUST00000214843.2 ENSMUST00000215406.2 |
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