RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR155 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000071000

Ensembl transcript IDs: ENSMUST00000095108.2, ENSMUST00000107860.3

Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACCTGCAGACCACGGCCTACCACCCCATGCTGCAGCCCTCGGAGGTaGCTGATGGCCATAGACCCAAAGATTAGTATAGCCATTTGCTTT +
Preference number: 1 (lower is better)
Translates to: TCRPRPTTPCCSPRR*LMAIDPKISIAICF
Trigger: AAAGCAAATGGCTATACTAATCTTTGGGTCTATGGCCATCAGTCACCTCCGAGGGCTGCAGCATGGGGTGGTAGGCCGTGGTCTGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR GCA 90 bp GGAGATTTACTCAGACCTTGCCAAACTAGACCTCTTGATGGATCGTaGACTGCCCTCTCAGAGTCCTCTGACCTCTTCACTGTGGTCCCC +
Preference number: 1 (lower is better)
Translates to: GDLLRPCQTRPLDGS*TALSESSDLFTVVP
Trigger: GGGGACCACAGTGAAGAGGTCAGAGGACTCTGAGAGGGCAGTGCACGATCCATCAAGAGGTCTAGTTTGGCAAGGTCTGAGTAAATCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR CCA 90 bp GCCTCACATTTATGGCCATCCTTTAGCCTCTGTCTTTCCAGTGCTTaGCTCACAGGCACAAGCCGTCCTATCTGCCTTTCCTTGCTCCTT +
Preference number: 1 (lower is better)
Translates to: ASHLWPSFSLCLSSA*LTGTSRPICLSLLL
Trigger: AAGGAGCAAGGAAAGGCAGATAGGACGGCTTGTGCCTGTGAGCCAAGCACTGGAAAGACAGAGGCTAAAGGATGGCCATAAATGTGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR TCA 90 bp ATAGAACAATTACAAGACCAGGATGGGTGTGGTGGTACCCAGTTTTaGTTCAGACTCAGGGCCAAGTGGATCTCTGTGAGTTCAAGGCCA +
Preference number: 1 (lower is better)
Translates to: IEQLQDQDGCGGTQF*FRLRAKWISVSSRP
Trigger: TGGCCTTGAACTCACAGAGATCCACTTGGCCCTGAGTCTGAATCAAAACTGGGTACCACCACACCCATCCTGGTCTTGTAATTGTTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR GCA 90 bp TATGGGTGTAGTTCCTTTTGGTTCTTGGAGACAAGGTCACTAACTTaGTACGTATCGGGCAGTGGCCTTCAATTGCTGATCCTCCTGCTT +
Preference number: 1 (lower is better)
Translates to: YGCSSFWFLETRSLT*YVSGSGLQLLILLL
Trigger: AAGCAGGAGGATCAGCAATTGAAGGCCACTGCCCGATACGTAGCAAGTTAGTGACCTTGTCTCCAAGAACCAAAAGGAACTACACCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR CCA 90 bp CGTCCTATCTGCCTTTCCTTGCTCCTTTATGGGTGTAGTTCCTTTTaGTTCTTGGAGACAAGGTCACTAACTTGCTACGTATCGGGCAGT +
Preference number: 1 (lower is better)
Translates to: RPICLSLLLYGCSSF*FLETRSLTCYVSGS
Trigger: ACTGCCCGATACGTAGCAAGTTAGTGACCTTGTCTCCAAGAACCAAAAGGAACTACACCCATAAAGGAGCAAGGAAAGGCAGATAGGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR CCA 90 bp TCAGGCTTTCACCTGCCACTATGCTTTTTCCATATAAAGTTCTCTTaGTTGCCATGGCATCCAGTCTTGAATGATGTTGAGGCTGCTGCT +
Preference number: 1 (lower is better)
Translates to: SGFHLPLCFFHIKFS*LPWHPVLNDVEAAA
Trigger: AGCAGCAGCCTCAACATCATTCAAGACTGGATGCCATGGCAACCAAGAGAACTTTATATGGAAAAAGCATAGTGGCAGGTGAAAGCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR CCA 90 bp GTTTATAGTCTTAGTTCTGAGTTCATTACTTGGACCTTGGGGAAGTaGCTCCTCTTCATTGCACCACTCTTCCCTCACAAACACAATGAA +
Preference number: 1 (lower is better)
Translates to: VYSLSSEFITWTLGK*LLFIAPLFPHKHNE
Trigger: TTCATTGTGTTTGTGAGGGAAGAGTGGTGCAATGAAGAGGAGCCACTTCCCCAAGGTCCAAGTAATGAACTCAGAACTAAGACTATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095108.2
ENSMUST00000107860.3
3UTR CCA 90 bp GATAGTTTGTTTATAGTCTTAGTTCTGAGTTCATTACTTGGACCTTaGGGAAGTGGCTCCTCTTCATTGCACCACTCTTCCCTCACAAAC +
Preference number: 1 (lower is better)
Translates to: DSLFIVLVLSSLLGP*GSGSSSLHHSSLTN
Trigger: GTTTGTGAGGGAAGAGTGGTGCAATGAAGAGGAGCCACTTCCCCAAGGTCCAAGTAATGAACTCAGAACTAAGACTATAAACAAACTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095108.2
ENSMUST00000107860.3
3UTR-3UTR GCA 90 bp CAGTTCTTCAGCATCAGGGGTCATCTCTGCTGGGATGTCAGGCTTTCACCTGCCGGCTGCTGCTGGCAGTaGAAGTGTCCGAACCTGCAG +
Preference number: 2 (lower is better)
Translates to: QFFSIRGHLCWDVRLSPAGCCWQ*KCPNLQ
Trigger: CTGCAGGTTCGGACACTTGCACTGCCAGCAGCAGCC...GGCAGGTGAAAGCCTGACATCCCAGCAGAGATGACCCCTGATGCTGAAGAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR-3UTR TCA 90 bp CTCTGTCTTTCCAGTGCTTGGCTCACAGGCACAAGCCGTCCTATCTGCCTTTCCCCTTATCATCAGGGATaGCCTTGGGGATTGCTGGAG +
Preference number: 2 (lower is better)
Translates to: LCLSSAWLTGTSRPICLSPYHQG*PWGLLE
Trigger: CTCCAGCAATCCCCAAGGTCATCCCTGATGATAAGG...GGAAAGGCAGATAGGACGGCTTGTGCCTGTGAGCCAAGCACTGGAAAGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR-3UTR TCA 90 bp CTCTGTCTTTCCAGTGCTTGGCTCACAGGCACAAGCCGTCCTATCTGCCTTTCCCATGGCATCCAGTCTTaGATGATGTTGAGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: LCLSSAWLTGTSRPICLSHGIQS*MMLRLL
Trigger: CAGCAGCCTCAACATCATTCAAGACTGGATGCCATG...GGAAAGGCAGATAGGACGGCTTGTGCCTGTGAGCCAAGCACTGGAAAGACAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR-3UTR GCA 90 bp TCAGAGGACAGCTCTTGGGAGTTGGTTTTCTGTTACCTTGTGAGGCCTAAGCTCCCATCAGCAGGTCCATaGAGGGCAAACGGTGAACAG +
Preference number: 2 (lower is better)
Translates to: SEDSSWELVFCYLVRPKLPSAGP*RANGEQ
Trigger: CTGTTCACCGTTTGCCCTGCATGGACCTGCTGATGG...GAGCTTAGGCCTCACAAGGTAACAGAAAACCAACTCCCAAGAGCTGTCCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR CAA 90 bp CAGCAGGTCCATGCAGGGCAAACGGTGAACAGCAAGAACCAGGCTTaGCATCTGTCTCCTAGTTATGCATGTCAGCATCTTTCCAGAGAT +
Preference number: 2 (lower is better)
Translates to: QQVHAGQTVNSKNQA*HLSPSYACQHLSRD
Trigger: ATCTCTGGAAAGATGCTGACATGCATAACTAGGAGACAGATGCAAAGCCTGGTTCTTGCTGTTCACCGTTTGCCCTGCATGGACCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR CAA 90 bp CCACAAATTAGGGAGATTTACTCAGACCTTGCCAAACTAGACCTCTaGATGGATCGTGCACTGCCCTCTCAGAGTCCTCTGACCTCTTCA +
Preference number: 2 (lower is better)
Translates to: PQIREIYSDLAKLDL*MDRALPSQSPLTSS
Trigger: TGAAGAGGTCAGAGGACTCTGAGAGGGCAGTGCACGATCCATCAAGAGGTCTAGTTTGGCAAGGTCTGAGTAAATCTCCCTAATTTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR-3UTR CCA 90 bp TTGATGGATCGTGCACTGCCCTCTCAGAGTCCTCTGACCTCTTCACTGTGGTCCGTCAAACACAAGCATTaGCTAATACTAGAGCACATG +
Preference number: 2 (lower is better)
Translates to: LMDRALPSQSPLTSSLWSVKHKH*LILEHM
Trigger: CATGTGCTCTAGTATTAGCCAATGCTTGTGTTTGAC...GGACCACAGTGAAGAGGTCAGAGGACTCTGAGAGGGCAGTGCACGATCCATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR-3UTR CCA 90 bp TCAGAGTCCTCTGACCTCTTCACTGTGGTCCCCAACTCCAAGTTCCCCCTTTATCATATAAAGTTCTCTTaGTTGCCATGGCATCCAGTC +
Preference number: 2 (lower is better)
Translates to: SESSDLFTVVPNSKFPLYHIKFS*LPWHPV
Trigger: GACTGGATGCCATGGCAACCAAGAGAACTTTATATG...ATAAAGGGGGAACTTGGAGTTGGGGACCACAGTGAAGAGGTCAGAGGACTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR CAA 90 bp GTTCTGAGTTCATTACTTGGACCTTGGGGAAGTGGCTCCTCTTCATaGCACCACTCTTCCCTCACAAACACAATGAAGAGGTTGGAAGTT +
Preference number: 2 (lower is better)
Translates to: VLSSLLGPWGSGSSS*HHSSLTNTMKRLEV
Trigger: AACTTCCAACCTCTTCATTGTGTTTGTGAGGGAAGAGTGGTGCAATGAAGAGGAGCCACTTCCCCAAGGTCCAAGTAATGAACTCAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095108.2
ENSMUST00000107860.3
3UTR-3UTR TCA 90 bp TTTTGGTTCTTGGAGACAAGGTCACTAACTTGCTACGTATCGGGCAGTGGCCTTAGGCTACCATACGAATaGTGGCTTTCATCATGGTCT +
Preference number: 2 (lower is better)
Translates to: FWFLETRSLTCYVSGSGLRLPYE*WLSSWS
Trigger: AGACCATGATGAAAGCCATCATTCGTATGGTAGCCT...AAGGCCACTGCCCGATACGTAGCAAGTTAGTGACCTTGTCTCCAAGAACCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR-3UTR GCA 90 bp GTCTTTCCAGTGCTTGGCTCACAGGCACAAGCCGTCCTATCTGCCTTTCCTTGCTTTCACCTGCCACTATaGTTTTTCCATATAAAGTTC +
Preference number: 2 (lower is better)
Translates to: VFPVLGSQAQAVLSAFPCFHLPL*FFHIKF
Trigger: GAACTTTATATGGAAAAAGCATAGTGGCAGGTGAAA...GCAAGGAAAGGCAGATAGGACGGCTTGTGCCTGTGAGCCAAGCACTGGAAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR-3UTR GCA 90 bp GTTTTGATTCAGACTCAGGGCCAAGTGGATCTCTGTGAGTTCAAGGCCAGCCTGGATTTACTCAGACCTTaGCAAACTAGACCTCTTGAT +
Preference number: 2 (lower is better)
Translates to: VLIQTQGQVDLCEFKASLDLLRP*QTRPLD
Trigger: ATCAAGAGGTCTAGTTTGGCAAGGTCTGAGTAAATC...CAGGCTGGCCTTGAACTCACAGAGATCCACTTGGCCCTGAGTCTGAATCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR-3UTR GCA 90 bp TTTCATCATGGTCTCCTCAGTCCTATAGGTGTGCCATTATATTTTGCTCTCATGCTTTCCAGAGATCTGTaGCAGCCTCTGGTCATGAAA +
Preference number: 2 (lower is better)
Translates to: FHHGLLSPIGVPLYFALMLSRDL*QPLVMK
Trigger: TTTCATGACCAGAGGCTGGCACAGATCTCTGGAAAG...CATGAGAGCAAAATATAATGGCACACCTATAGGACTGAGGAGACCATGATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR-3UTR CCA 90 bp TTTCATCATGGTCTCCTCAGTCCTATAGGTGTGCCATTATATTTTGCTCTCATGATCGGACCAGGCAGATaGGAATCTCAGTCAGGAATA +
Preference number: 2 (lower is better)
Translates to: FHHGLLSPIGVPLYFALMIGPGR*ESQSGI
Trigger: TATTCCTGACTGAGATTCCCATCTGCCTGGTCCGAT...CATGAGAGCAAAATATAATGGCACACCTATAGGACTGAGGAGACCATGATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR CAA 90 bp CTGGTTGTTCGTGTTCCTTCACTTTTTCTCTCCCCATTCATGTCCTaGTTTCTTATCTGTGGCTGTTTGCTTGTTTCCATGAATTCCATA +
Preference number: 2 (lower is better)
Translates to: LVVRVPSLFLSPFMS*FLICGCLLVSMNSI
Trigger: TATGGAATTCATGGAAACAAGCAAACAGCCACAGATAAGAAACAAGGACATGAATGGGGAGAGAAAAAGTGAAGGAACACGAACAACCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR GCA 72 bp GTTGAGGCTGCTGCTGGCAGTGCAAGTGTCCGAACCTaGAGACCACGGCCTACCACCCCATGCTGCAGCCCT +
Preference number: 3 (lower is better)
Translates to: VEAAAGSASVRT*RPRPTTPCCSP
Trigger: AGGGCTGCAGCATGGGGTGGTAGGCCGTGGTCTGCAGGTTCGGACACTTGCACTGCCAGCAGCAGCCTCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR TCA 72 bp CCACGGCCTACCACCCCATGCTGCAGCCCTCGGAGGTaGCTGATGGCCATAGACCCAAAGATTAGTATAGCC +
Preference number: 3 (lower is better)
Translates to: PRPTTPCCSPRR*LMAIDPKISIA
Trigger: GGCTATACTAATCTTTGGGTCTATGGCCATCAGTCACCTCCGAGGGCTGCAGCATGGGGTGGTAGGCCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR-3UTR CAA 90 bp GTCTTTCCAGTGCTTGGCTCACAGGCACAAGCCGTCCTATCTGCCTTTCCTTGCAGCTCCCAGAGGGCTTaGGGGACACTGGTCAGTTCT +
Preference number: 3 (lower is better)
Translates to: VFPVLGSQAQAVLSAFPCSSQRA*GTLVSS
Trigger: AGAACTGACCAGTGTCCCCAAAGCCCTCTGGGAGCT...GCAAGGAAAGGCAGATAGGACGGCTTGTGCCTGTGAGCCAAGCACTGGAAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR CCA 72 bp CCCTTTATGACAGCTCCCAGAGGGCTTTGGGGACACTaGTCAGTTCTTCAGCATCAGGGGTCATCTCTGCTG +
Preference number: 3 (lower is better)
Translates to: PFMTAPRGLWGH*SVLQHQGSSLL
Trigger: CAGCAGAGATGACCCCTGATGCTGAAGAACTGACCAGTGTCCCCAAAGCCCTCTGGGAGCTGTCATAAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR CCA 72 bp CCAAGTTCCCCCTTTATGACAGCTCCCAGAGGGCTTTaGGGACACTGGTCAGTTCTTCAGCATCAGGGGTCA +
Preference number: 3 (lower is better)
Translates to: PSSPFMTAPRGL*GHWSVLQHQGS
Trigger: TGACCCCTGATGCTGAAGAACTGACCAGTGTCCCCAAAGCCCTCTGGGAGCTGTCATAAAGGGGGAACTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR-3UTR CAA 90 bp TGGGATGGGGAGAGAGAAGGCACACAGTTCTCCATGTTCCCTCACAGACAAGTCAGTGGCTCCTCTTCATaGCACCACTCTTCCCTCACA +
Preference number: 3 (lower is better)
Translates to: WDGEREGTQFSMFPHRQVSGSSS*HHSSLT
Trigger: TGTGAGGGAAGAGTGGTGCAATGAAGAGGAGCCACT...GACTTGTCTGTGAGGGAACATGGAGAACTGTGTGCCTTCTCTCTCCCCATCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR GCA 72 bp CTCAGACCTTGCCAAACTAGACCTCTTGATGGATCGTaGACTGCCCTCTCAGAGTCCTCTGACCTCTTCACT +
Preference number: 3 (lower is better)
Translates to: LRPCQTRPLDGS*TALSESSDLFT
Trigger: AGTGAAGAGGTCAGAGGACTCTGAGAGGGCAGTGCACGATCCATCAAGAGGTCTAGTTTGGCAAGGTCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR-3UTR CAA 90 bp TTGATGGATCGTGCACTGCCCTCTCAGAGTCCTCTGACCTCTTCACTGTGGTCCAACACAATGAAGAGGTaGGAAGTTCTGCACTGTGAC +
Preference number: 3 (lower is better)
Translates to: LMDRALPSQSPLTSSLWSNTMKR*EVLHCD
Trigger: GTCACAGTGCAGAACTTCCAACCTCTTCATTGTGTT...GGACCACAGTGAAGAGGTCAGAGGACTCTGAGAGGGCAGTGCACGATCCATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR GCA 72 bp TCCAGTGCTTGGCTCACAGGCACAAGCCGTCCTATCTaGCTTTCCTTGCTCCTTTATGGGTGTAGTTCCTTT +
Preference number: 3 (lower is better)
Translates to: SSAWLTGTSRPI*LSLLLYGCSSF
Trigger: AAAGGAACTACACCCATAAAGGAGCAAGGAAAGGCAGATAGGACGGCTTGTGCCTGTGAGCCAAGCACTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR CCA 72 bp GTCACAACATGCCCAAGGAGGTCAGAGGACAGCTCTTaGGAGTTGGTTTTCTGTTACCTTGTGAGGCCTAAG +
Preference number: 3 (lower is better)
Translates to: VTTCPRRSEDSS*ELVFCYLVRPK
Trigger: CTTAGGCCTCACAAGGTAACAGAAAACCAACTCCCAAGAGCTGTCCTCTGACCTCCTTGGGCATGTTGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR GCA 72 bp CCTAAGCTCACATTGTCCGGCGTGCGCCTTTACCCTTaGTGGTCCCTTTTGCATTGTTCTTGTCAAACACAA +
Preference number: 3 (lower is better)
Translates to: PKLTLSGVRLYP*WSLLHCSCQTQ
Trigger: TTGTGTTTGACAAGAACAATGCAAAAGGGACCAGCAAGGGTAAAGGCGCACGCCGGACAATGTGAGCTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR-3UTR CAA 90 bp CTTTTGGTTCTTGGAGACAAGGTCACTAACTTGCTACGTATCGGGCAGTGGCCTCAAAGGTGTAAAGGCTaGTCCTTCCAGCCTGTTAAC +
Preference number: 3 (lower is better)
Translates to: LLVLGDKVTNLLRIGQWPQRCKG*SFQPVN
Trigger: GTTAACAGGCTGGAAGGACAAGCCTTTACACCTTTG...AGGCCACTGCCCGATACGTAGCAAGTTAGTGACCTTGTCTCCAAGAACCAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR TCA 72 bp AGCATCTTTCCAGAGATCTGTGCCAGCCTCTGGTCATaGAAGAGTAGTTCTACGACGCCACTAAGGTTGAAC +
Preference number: 3 (lower is better)
Translates to: SIFPEICASLWS*KSSSTTPLRLN
Trigger: GTTCAACCTTAGTGGCGTCGTAGAACTACTCTTTCATGACCAGAGGCTGGCACAGATCTCTGGAAAGATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR GCA 72 bp TGTCCGGCGTGCGCCTTTACCCTTGCTGGTCCCTTTTaGATTGTTCTTGTCAAACACAAGCATTGGCTAATA +
Preference number: 3 (lower is better)
Translates to: CPACAFTLAGPF*IVLVKHKHWLI
Trigger: TATTAGCCAATGCTTGTGTTTGACAAGAACAATGCAAAAGGGACCAGCAAGGGTAAAGGCGCACGCCGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR-3UTR CAA 90 bp TCTGAGTTCATTACTTGGACCTTGGGGAAGTGGCTCCTCTTCATTGCACCACTCAACACAATGAAGAGGTaGGAAGTTCTGCACTGTGAC +
Preference number: 3 (lower is better)
Translates to: SEFITWTLGKWLLFIAPLNTMKR*EVLHCD
Trigger: GTCACAGTGCAGAACTTCCAACCTCTTCATTGTGTT...GAGTGGTGCAATGAAGAGGAGCCACTTCCCCAAGGTCCAAGTAATGAACTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095108.2
ENSMUST00000107860.3
3UTR-3UTR CAA 90 bp CTTTTGGTTCTTGGAGACAAGGTCACTAACTTGCTACGTATCGGGCAGTGGCCTCTTATCTGTGGCTGTTaGCTTGTTTCCATGAATTCC +
Preference number: 3 (lower is better)
Translates to: LLVLGDKVTNLLRIGQWPLICGC*LVSMNS
Trigger: GGAATTCATGGAAACAAGCAAACAGCCACAGATAAG...AGGCCACTGCCCGATACGTAGCAAGTTAGTGACCTTGTCTCCAAGAACCAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR-3UTR CAA 90 bp TTTTGGTTCTTGGAGACAAGGTCACTAACTTGCTACGTATCGGGCAGTGGCCTTTCCCCATTCATGTCCTaGTTTCTTATCTGTGGCTGT +
Preference number: 3 (lower is better)
Translates to: FWFLETRSLTCYVSGSGLSPFMS*FLICGC
Trigger: ACAGCCACAGATAAGAAACAAGGACATGAATGGGGA...AAGGCCACTGCCCGATACGTAGCAAGTTAGTGACCTTGTCTCCAAGAACCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR GCA 72 bp AGTTCCTTTTGGTTCTTGGAGACAAGGTCACTAACTTaGTACGTATCGGGCAGTGGCCTTCAATTGCTGATC +
Preference number: 3 (lower is better)
Translates to: SSFWFLETRSLT*YVSGSGLQLLI
Trigger: GATCAGCAATTGAAGGCCACTGCCCGATACGTAGCAAGTTAGTGACCTTGTCTCCAAGAACCAAAAGGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR CCA 72 bp CTTAGTTCTGAGTTCATTACTTGGACCTTGGGGAAGTaGCTCCTCTTCATTGCACCACTCTTCCCTCACAAA +
Preference number: 3 (lower is better)
Translates to: LSSEFITWTLGK*LLFIAPLFPHK
Trigger: TTTGTGAGGGAAGAGTGGTGCAATGAAGAGGAGCCACTTCCCCAAGGTCCAAGTAATGAACTCAGAACTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095108.2
ENSMUST00000107860.3
3UTR GCA 72 bp ATCTCTGCTGGGATGTCAGGCTTTCACCTGCCACTATaGTTTTTCCATATAAAGTTCTCTTGGTTGCCATGG +
Preference number: 3 (lower is better)
Translates to: ISAGMSGFHLPL*FFHIKFSWLPW
Trigger: CCATGGCAACCAAGAGAACTTTATATGGAAAAAGCATAGTGGCAGGTGAAAGCCTGACATCCCAGCAGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR CCA 72 bp GAAAATAGAACAATTACAAGACCAGGATGGGTGTGGTaGTACCCAGTTTTGATTCAGACTCAGGGCCAAGTG +
Preference number: 3 (lower is better)
Translates to: ENRTITRPGWVW*YPVLIQTQGQV
Trigger: CACTTGGCCCTGAGTCTGAATCAAAACTGGGTACCACCACACCCATCCTGGTCTTGTAATTGTTCTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR CCA 72 bp TTTATAGTCTTAGTTCTGAGTTCATTACTTGGACCTTaGGGAAGTGGCTCCTCTTCATTGCACCACTCTTCC +
Preference number: 3 (lower is better)
Translates to: FIVLVLSSLLGP*GSGSSSLHHSS
Trigger: GGAAGAGTGGTGCAATGAAGAGGAGCCACTTCCCCAAGGTCCAAGTAATGAACTCAGAACTAAGACTATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095108.2
ENSMUST00000107860.3
3UTR CCA 72 bp AAAAGCCTTATCATCAGGGATGACCTTGGGGATTGCTaGAGATGTTACAGCTGTGAGTGTTGTAGGTTATGT +
Preference number: 3 (lower is better)
Translates to: KSLIIRDDLGDC*RCYSCECCRLC
Trigger: ACATAACCTACAACACTCACAGCTGTAACATCTCCAGCAATCCCCAAGGTCATCCCTGATGATAAGGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR CCA 72 bp GAAGAAAATAGAACAATTACAAGACCAGGATGGGTGTaGTGGTACCCAGTTTTGATTCAGACTCAGGGCCAA +
Preference number: 3 (lower is better)
Translates to: EENRTITRPGWV*WYPVLIQTQGQ
Trigger: TTGGCCCTGAGTCTGAATCAAAACTGGGTACCACCACACCCATCCTGGTCTTGTAATTGTTCTATTTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR CCA 72 bp TGCCTTTCCTTGCTCCTTTATGGGTGTAGTTCCTTTTaGTTCTTGGAGACAAGGTCACTAACTTGCTACGTA +
Preference number: 3 (lower is better)
Translates to: CLSLLLYGCSSF*FLETRSLTCYV
Trigger: TACGTAGCAAGTTAGTGACCTTGTCTCCAAGAACCAAAAGGAACTACACCCATAAAGGAGCAAGGAAAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR CCA 72 bp CACCTGCCACTATGCTTTTTCCATATAAAGTTCTCTTaGTTGCCATGGCATCCAGTCTTGAATGATGTTGAG +
Preference number: 3 (lower is better)
Translates to: HLPLCFFHIKFS*LPWHPVLNDVE
Trigger: CTCAACATCATTCAAGACTGGATGCCATGGCAACCAAGAGAACTTTATATGGAAAAAGCATAGTGGCAGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR-3UTR CAA 90 bp TGGAGATGTTACAGCTGTGAGTGTTGTAGGTTATGTGGGAAGAAAGCAATAAGACCTTGCTGGTCCCTTTaGCATTGTTCTTGTCAAACA +
Preference number: 3 (lower is better)
Translates to: WRCYSCECCRLCGKKAIRPCWSL*HCSCQT
Trigger: TGTTTGACAAGAACAATGCAAAAGGGACCAGCAAGG...TCTTATTGCTTTCTTCCCACATAACCTACAACACTCACAGCTGTAACATCTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR TCA 72 bp TGGCTGTTTGCTTGTTTCCATGAATTCCATAATAAATaGTCCCCCAAAGGATTGAAACATTTGAGACACCCC +
Preference number: 3 (lower is better)
Translates to: WLFACFHEFHNK*SPKGLKHLRHP
Trigger: GGGGTGTCTCAAATGTTTCAATCCTTTGGGGGATCATTTATTATGGAATTCATGGAAACAAGCAAACAGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
CDS-3UTR CCA 90 bp TCAGTTCTTCAGCATCAGGGGTCATCTCTGCTGGGATGTCAGGCTTTCACCTGCAGGAACTGGCAGCCATaGGCACATAGGCAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: SVLQHQGSSLLGCQAFTCRNWQP*AHRQPC
Trigger: ACAAGGCTGCCTATGTGCCCATGGCTGCCAGTTCCT...GCAGGTGAAAGCCTGACATCCCAGCAGAGATGACCCCTGATGCTGAAGAACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR CAA 72 bp TTGGTTTTCTGTTACCTTGTGAGGCCTAAGCTCACATaGTCCGGCGTGCGCCTTTACCCTTGCTGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: LVFCYLVRPKLT*SGVRLYPCWSL
Trigger: AAGGGACCAGCAAGGGTAAAGGCGCACGCCGGACAATGTGAGCTTAGGCCTCACAAGGTAACAGAAAACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
CDS-3UTR GCA 90 bp TCTGAGTTCATTACTTGGACCTTGGGGAAGTGGCTCCTCTTCATTGCACCACTCGAAGGGCAGCCGCATTaGCAAAGATGTCTGCACTAC +
Preference number: 4 (lower is better)
Translates to: SEFITWTLGKWLLFIAPLEGQPH*QRCLHY
Trigger: GTAGTGCAGACATCTTTGGCAATGCGGCTGCCCTTC...GAGTGGTGCAATGAAGAGGAGCCACTTCCCCAAGGTCCAAGTAATGAACTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095108.2
ENSMUST00000107860.3
CDS-3UTR GCA 90 bp TCAGAGGACAGCTCTTGGGAGTTGGTTTTCTGTTACCTTGTGAGGCCTAAGCTCGAAGGGCAGCCGCATTaGCAAAGATGTCTGCACTAC +
Preference number: 4 (lower is better)
Translates to: SEDSSWELVFCYLVRPKLEGQPH*QRCLHY
Trigger: GTAGTGCAGACATCTTTGGCAATGCGGCTGCCCTTC...GAGCTTAGGCCTCACAAGGTAACAGAAAACCAACTCCCAAGAGCTGTCCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
CDS-3UTR GCA 90 bp GTTCATTACTTGGACCTTGGGGAAGTGGCTCCTCTTCATTGCACCACTCTTCCCGAAGAGGACTGGGACTaGCAAGAAGATCATGTTGGC +
Preference number: 4 (lower is better)
Translates to: VHYLDLGEVAPLHCTTLPEEDWD*QEDHVG
Trigger: GCCAACATGATCTTCTTGGCAGTCCCAGTCCTCTTC...GGGAAGAGTGGTGCAATGAAGAGGAGCCACTTCCCCAAGGTCCAAGTAATGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095108.2
ENSMUST00000107860.3
CDS-3UTR CCA 90 bp TCATTGCACCACTCTTCCCTCACAAACACAATGAAGAGGTTGGAAGTTCTGCACAGGAACTGGCAGCCATaGGCACATAGGCAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: SLHHSSLTNTMKRLEVLHRNWQP*AHRQPC
Trigger: ACAAGGCTGCCTATGTGCCCATGGCTGCCAGTTCCT...GTGCAGAACTTCCAACCTCTTCATTGTGTTTGTGAGGGAAGAGTGGTGCAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095108.2
ENSMUST00000107860.3
3UTR CAA 72 bp ATTACAAGACCAGGATGGGTGTGGTGGTACCCAGTTTaGATTCAGACTCAGGGCCAAGTGGATCTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: ITRPGWVWWYPV*IQTQGQVDLCE
Trigger: CTCACAGAGATCCACTTGGCCCTGAGTCTGAATCAAAACTGGGTACCACCACACCCATCCTGGTCTTGTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR CAA 72 bp TTGTCCGGCGTGCGCCTTTACCCTTGCTGGTCCCTTTaGCATTGTTCTTGTCAAACACAAGCATTGGCTAAT +
Preference number: 4 (lower is better)
Translates to: LSGVRLYPCWSL*HCSCQTQALAN
Trigger: ATTAGCCAATGCTTGTGTTTGACAAGAACAATGCAAAAGGGACCAGCAAGGGTAAAGGCGCACGCCGGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
CDS-3UTR TCA 90 bp AAGTGGCTCCTCTTCATTGCACCACTCTTCCCTCACAAACACAATGAAGAGGTTCATAGGAGACAAAGATaGAGAGGACTGGGACTGCCA +
Preference number: 4 (lower is better)
Translates to: KWLLFIAPLFPHKHNEEVHRRQR*RGLGLP
Trigger: TGGCAGTCCCAGTCCTCTTCATCTTTGTCTCCTATG...AACCTCTTCATTGTGTTTGTGAGGGAAGAGTGGTGCAATGAAGAGGAGCCACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095108.2
ENSMUST00000107860.3
CDS-3UTR TCA 90 bp TTAGTTCTGAGTTCATTACTTGGACCTTGGGGAAGTGGCTCCTCTTCATTGCACCATAGGAGACAAAGATaGAGAGGACTGGGACTGCCA +
Preference number: 4 (lower is better)
Translates to: LVLSSLLGPWGSGSSSLHHRRQR*RGLGLP
Trigger: TGGCAGTCCCAGTCCTCTTCATCTTTGTCTCCTATG...GTGCAATGAAGAGGAGCCACTTCCCCAAGGTCCAAGTAATGAACTCAGAACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095108.2
ENSMUST00000107860.3
CDS-3UTR CCA 90 bp CTTAGTTCTGAGTTCATTACTTGGACCTTGGGGAAGTGGCTCCTCTTCATTGCATCAGTTAGGTGTTTCTaGCCCACCAGGTTCCTCACA +
Preference number: 4 (lower is better)
Translates to: LSSEFITWTLGKWLLFIASVRCF*PTRFLT
Trigger: TGTGAGGAACCTGGTGGGCCAGAAACACCTAACTGA...TGCAATGAAGAGGAGCCACTTCCCCAAGGTCCAAGTAATGAACTCAGAACTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095108.2
ENSMUST00000107860.3
3UTR CAA 72 bp CATATAAAGTTCTCTTGGTTGCCATGGCATCCAGTCTaGAATGATGTTGAGGCTGCTGCTGGCAGTGCAAGT +
Preference number: 4 (lower is better)
Translates to: HIKFSWLPWHPV*NDVEAAAGSAS
Trigger: ACTTGCACTGCCAGCAGCAGCCTCAACATCATTCAAGACTGGATGCCATGGCAACCAAGAGAACTTTATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
3UTR CAA 72 bp TCCTTGCTCCTTTATGGGTGTAGTTCCTTTTGGTTCTaGGAGACAAGGTCACTAACTTGCTACGTATCGGGC +
Preference number: 4 (lower is better)
Translates to: SLLLYGCSSFWF*ETRSLTCYVSG
Trigger: GCCCGATACGTAGCAAGTTAGTGACCTTGTCTCCAAGAACCAAAAGGAACTACACCCATAAAGGAGCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107860.3
CDS-3UTR CCA 90 bp GGCTCCTCTTCATTGCACCACTCTTCCCTCACAAACACAATGAAGAGGTTGGAAAAAGATGAAGAGGACTaGGACTGCCAAGAAGATCAT +
Preference number: 4 (lower is better)
Translates to: GSSSLHHSSLTNTMKRLEKDEED*DCQEDH
Trigger: ATGATCTTCTTGGCAGTCCCAGTCCTCTTCATCTTT...TTCCAACCTCTTCATTGTGTTTGTGAGGGAAGAGTGGTGCAATGAAGAGGAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095108.2
ENSMUST00000107860.3
CDS-3UTR CCA 90 bp AAGTGGCTCCTCTTCATTGCACCACTCTTCCCTCACAAACACAATGAAGAGGTTAAAGATGAAGAGGACTaGGACTGCCAAGAAGATCAT +
Preference number: 4 (lower is better)
Translates to: KWLLFIAPLFPHKHNEEVKDEED*DCQEDH
Trigger: ATGATCTTCTTGGCAGTCCCAGTCCTCTTCATCTTT...AACCTCTTCATTGTGTTTGTGAGGGAAGAGTGGTGCAATGAAGAGGAGCCACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095108.2
ENSMUST00000107860.3
CDS-3UTR GCA 90 bp TCTGAGTTCATTACTTGGACCTTGGGGAAGTGGCTCCTCTTCATTGCACCACTCATTGCCAAAGATGTCTaGACTACAGAATTAGTGATA +
Preference number: 4 (lower is better)
Translates to: SEFITWTLGKWLLFIAPLIAKDV*TTELVI
Trigger: TATCACTAATTCTGTAGTGCAGACATCTTTGGCAAT...GAGTGGTGCAATGAAGAGGAGCCACTTCCCCAAGGTCCAAGTAATGAACTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095108.2
ENSMUST00000107860.3
CDS-3UTR GCA 90 bp AGTTCATTACTTGGACCTTGGGGAAGTGGCTCCTCTTCATTGCACCACTCTTCCATTGCCAAAGATGTCTaGACTACAGAATTAGTGATA +
Preference number: 4 (lower is better)
Translates to: SSLLGPWGSGSSSLHHSSIAKDV*TTELVI
Trigger: TATCACTAATTCTGTAGTGCAGACATCTTTGGCAAT...GGAAGAGTGGTGCAATGAAGAGGAGCCACTTCCCCAAGGTCCAAGTAATGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095108.2
ENSMUST00000107860.3
CDS-3UTR CAA 90 bp GTTCTGAGTTCATTACTTGGACCTTGGGGAAGTGGCTCCTCTTCATTGCACCACGCCAAGAAGATCATGTaGGCCACAACCATGCTGATG +
Preference number: 5 (lower is better)
Translates to: VLSSLLGPWGSGSSSLHHAKKIM*ATTMLM
Trigger: CATCAGCATGGTTGTGGCCAACATGATCTTCTTGGC...GTGGTGCAATGAAGAGGAGCCACTTCCCCAAGGTCCAAGTAATGAACTCAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095108.2
ENSMUST00000107860.3
CDS-3UTR CAA 90 bp GATAGTTTGTTTATAGTCTTAGTTCTGAGTTCATTACTTGGACCTTGGGGAAGTGCCAAGAAGATCATGTaGGCCACAACCATGCTGATG +
Preference number: 5 (lower is better)
Translates to: DSLFIVLVLSSLLGPWGSAKKIM*ATTMLM
Trigger: CATCAGCATGGTTGTGGCCAACATGATCTTCTTGGC...ACTTCCCCAAGGTCCAAGTAATGAACTCAGAACTAAGACTATAAACAAACTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095108.2
ENSMUST00000107860.3