Pregenerated sensors for OLFR154 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075212Ensembl transcript IDs: ENSMUST00000099918.5
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS CCA 90 bp | AGGAGGAAACATTCTGTCACTACAAACTGGCTAAATAAACAAAGCTaGATAGCACAACCTAAGAAGGAGATCACCTTTTTATCCACAAAC | + |
Preference number: 5 (lower is better) Translates to: RRKHSVTTNWLNKQS*IAQPKKEITFLSTN Trigger: GTTTGTGGATAAAAAGGTGATCTCCTTCTTAGGTTGTGCTATCCAGCTTTGTTTATTTAGCCAGTTTGTAGTGACAGAATGTTTCCTCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099918.5 |
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CDS CCA 72 bp | CACAACCTTATTGATATCCAGAGAGAAGCTGGAGCTTaGACGTACATAGATAAAGAAGAGAGTCCCGTAAAG | + |
Preference number: 6 (lower is better) Translates to: HNLIDIQREAGA*TYIDKEESPVK Trigger: CTTTACGGGACTCTCTTCTTTATCTATGTACGTCCAAGCTCCAGCTTCTCTCTGGATATCAATAAGGTTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099918.5 |
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CDS TCA 72 bp | GGACAATTTGGAGATGGAAGGAGGAGGTTAATCCAGTaGAGAAGAACTCAGTCACAACAGTTTGATTTCTGT | + |
Preference number: 6 (lower is better) Translates to: GQFGDGRRRLIQ*RRTQSQQFDFC Trigger: ACAGAAATCAAACTGTTGTGACTGAGTTCTTCTTCACTGGATTAACCTCCTCCTTCCATCTCCAAATTGTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099918.5 |
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CDS CCA 72 bp | CATTCTGTCACTACAAACTGGCTAAATAAACAAAGCTaGATAGCACAACCTAAGAAGGAGATCACCTTTTTA | + |
Preference number: 6 (lower is better) Translates to: HSVTTNWLNKQS*IAQPKKEITFL Trigger: TAAAAAGGTGATCTCCTTCTTAGGTTGTGCTATCCAGCTTTGTTTATTTAGCCAGTTTGTAGTGACAGAATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099918.5 |