Pregenerated sensors for OLFR1537 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096109Ensembl transcript IDs: ENSMUST00000213472.2
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGACAGAAGTCCACAATTAGTAGAGAGTTCTCATGGGGTAGAAAGTaGGGGGTGTGGAAATTCTCATGGAGTCAGGTGTGGTGGTGGAGA | + |
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Preference number: 1 (lower is better) Translates to: RQKSTISREFSWGRK*GVWKFSWSQVWWWR Trigger: TCTCCACCACCACACCTGACTCCATGAGAATTTCCACACCCCTCACTTTCTACCCCATGAGAACTCTCTACTAATTGTGGACTTCTGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| 3UTR CCA 90 bp | TGTAGAGGCCACCTCCAGCAGAAAGACAGGGCATCAAGTGTGGGATaGGGTTGCCATCTCACAGTAAAAACATTGACACAAAATTGTTCT | + |
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Preference number: 1 (lower is better) Translates to: CRGHLQQKDRASSVG*GCHLTVKTLTQNCS Trigger: AGAACAATTTTGTGTCAATGTTTTTACTGTGAGATGGCAACCCCATCCCACACTTGATGCCCTGTCTTTCTGCTGGAGGTGGCCTCTACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| 3UTR TCA 90 bp | TTATTTACACCAAATCGATGGGCAGAAGCTGCTGTCCCTGGTGGTTaGATTATTGAAAAGCTGGAAGAAGCTGAGGAGGACAACCCTATA | + |
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Preference number: 1 (lower is better) Translates to: LFTPNRWAEAAVPGG*IIEKLEEAEEDNPI Trigger: TATAGGGTTGTCCTCCTCAGCTTCTTCCAGCTTTTCAATAATTCAACCACCAGGGACAGCAGCTTCTGCCCATCGATTTGGTGTAAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| 3UTR CCA 90 bp | AATTCTCATGGAGTCAGGTGTGGTGGTGGAGAAAGGTATTGGATGTaGAATATTCAGAGAATGGACAGGAAGGGGATACAATCTGGAGTT | + |
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Preference number: 1 (lower is better) Translates to: NSHGVRCGGGERYWM*NIQRMDRKGIQSGV Trigger: AACTCCAGATTGTATCCCCTTCCTGTCCATTCTCTGAATATTCCACATCCAATACCTTTCTCCACCACCACACCTGACTCCATGAGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| 3UTR GCA 90 bp | CCTGACACTATTACTGATGCTGTAGTGTGCTCACAAAAAGGGACCTaGCATGACTCACCTCTGAAAGATAAAACAAGCATGAAAGTTTCA | + |
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Preference number: 1 (lower is better) Translates to: PDTITDAVVCSQKGT*HDSPLKDKTSMKVS Trigger: TGAAACTTTCATGCTTGTTTTATCTTTCAGAGGTGAGTCATGGCAGGTCCCTTTTTGTGAGCACACTACAGCATCAGTAATAGTGTCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| 3UTR GCA 90 bp | TGTATTTCTTGCATCAAAATCCTAAATGTCTTGCCTCTCTCTCTGTaGCCAGCCATTGGCTGCATGAAACTTTATTTCCCAATCAAAACC | + |
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Preference number: 1 (lower is better) Translates to: CISCIKILNVLPLSL*PAIGCMKLYFPIKT Trigger: GGTTTTGATTGGGAAATAAAGTTTCATGCAGCCAATGGCTGGGCACAGAGAGAGAGGCAAGACATTTAGGATTTTGATGCAAGAAATACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| 3UTR GCA 90 bp | ATTTGGCCTATGACCAAAGCCTTGACATTCTACAAAACAGTTAACTaGTCAGACATATTTCATCTACTGCTATTCTCAAGAGCAAAGAAG | + |
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Preference number: 1 (lower is better) Translates to: IWPMTKALTFYKTVN*SDIFHLLLFSRAKK Trigger: CTTCTTTGCTCTTGAGAATAGCAGTAGATGAAATATGTCTGAGCAGTTAACTGTTTTGTAGAATGTCAAGGCTTTGGTCATAGGCCAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| 3UTR-3UTR TCA 90 bp | AGTAAGAGGGAACTTGTAGAGGCCACCTCCAGCAGAAAGACAGGGCATCAAGTGAGTTATCTCAGACACTaGGCCACCAACCAGGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: SKRELVEATSSRKTGHQVSYLRH*ATNQEA Trigger: GGCTTCCTGGTTGGTGGCTCAGTGTCTGAGATAACT...CACTTGATGCCCTGTCTTTCTGCTGGAGGTGGCCTCTACAAGTTCCCTCTTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| 3UTR-3UTR TCA 90 bp | AGTAAGAGGGAACTTGTAGAGGCCACCTCCAGCAGAAAGACAGGGCATCAAGTGTCATGGGGTAGAAAGTaGGGGGTGTGGAAATTCTCA | + |
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Preference number: 2 (lower is better) Translates to: SKRELVEATSSRKTGHQVSWGRK*GVWKFS Trigger: TGAGAATTTCCACACCCCTCACTTTCTACCCCATGA...CACTTGATGCCCTGTCTTTCTGCTGGAGGTGGCCTCTACAAGTTCCCTCTTACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| 3UTR-3UTR TCA 90 bp | CCAAGGCCTGACACTATTACTGATGCTGTAGTGTGCTCACAAAAAGGGACCTGCAAAGCTGGAAGAAGCTaGGGAGGACAACCCTATAGG | + |
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Preference number: 2 (lower is better) Translates to: PRPDTITDAVVCSQKGTCKAGRS*GGQPYR Trigger: CCTATAGGGTTGTCCTCCTCAGCTTCTTCCAGCTTT...GCAGGTCCCTTTTTGTGAGCACACTACAGCATCAGTAATAGTGTCAGGCCTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGACAGCAGGATCTGGACTCAGTCAGAGAAGATGCACCTAATCCTCAAGAGAGTGTGGAAATTCTCATaGAGTCAGGTGTGGTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: EDSRIWTQSEKMHLILKRVWKFS*SQVWWW Trigger: CCACCACCACACCTGACTCCATGAGAATTTCCACAC...TCTCTTGAGGATTAGGTGCATCTTCTCTGACTGAGTCCAGATCCTGCTGTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| 3UTR-3UTR CCA 90 bp | AGTAAGAGGGAACTTGTAGAGGCCACCTCCAGCAGAAAGACAGGGCATCAAGTGGCAACAGAACCAAATTaGGATCAGGCTCAAGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: SKRELVEATSSRKTGHQVATEPN*DQAQGE Trigger: TTCCCCTTGAGCCTGATCCCAATTTGGTTCTGTTGC...CACTTGATGCCCTGTCTTTCTGCTGGAGGTGGCCTCTACAAGTTCCCTCTTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGATACAGAGACAAAGTATGGAGCAGTGACTGAAGGAAAGACCATGCAGAGTACAGGGCATCAAGTGTaGGATGGGGTTGCCATCTCA | + |
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Preference number: 2 (lower is better) Translates to: GDTETKYGAVTEGKTMQSTGHQV*DGVAIS Trigger: TGAGATGGCAACCCCATCCCACACTTGATGCCCTGT...ACTCTGCATGGTCTTTCCTTCAGTCACTGCTCCATACTTTGTCTCTGTATCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| 3UTR-3UTR CCA 90 bp | ACTATTACTGATGCTGTAGTGTGCTCACAAAAAGGGACCTGCCATGACTCACCTTTTACACCAAATCGATaGGCAGAAGCTGCTGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: TITDAVVCSQKGTCHDSPFTPNR*AEAAVP Trigger: AGGGACAGCAGCTTCTGCCCATCGATTTGGTGTAAA...AGGTGAGTCATGGCAGGTCCCTTTTTGTGAGCACACTACAGCATCAGTAATAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| 3UTR-3UTR CCA 90 bp | CCAAGGCCTGACACTATTACTGATGCTGTAGTGTGCTCACAAAAAGGGACCTGCGAAAGGTATTGGATGTaGAATATTCAGAGAATGGAC | + |
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Preference number: 2 (lower is better) Translates to: PRPDTITDAVVCSQKGTCERYWM*NIQRMD Trigger: GTCCATTCTCTGAATATTCCACATCCAATACCTTTC...GCAGGTCCCTTTTTGTGAGCACACTACAGCATCAGTAATAGTGTCAGGCCTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| 3UTR-3UTR CCA 90 bp | ATGCACCTAATCCTCAAGAGACAGAAGTCCACAATTAGTAGAGAGTTCTCATGGAGTCAGGTGTGGTGGTaGAGAAAGGTATTGGATGTG | + |
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Preference number: 2 (lower is better) Translates to: MHLILKRQKSTISREFSWSQVWW*RKVLDV Trigger: CACATCCAATACCTTTCTCCACCACCACACCTGACT...CCATGAGAACTCTCTACTAATTGTGGACTTCTGTCTCTTGAGGATTAGGTGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| 3UTR-3UTR CCA 90 bp | ATGCACCTAATCCTCAAGAGACAGAAGTCCACAATTAGTAGAGAGTTCTCATGGTCATGGAGTCAGGTGTaGTGGTGGAGAAAGGTATTG | + |
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Preference number: 2 (lower is better) Translates to: MHLILKRQKSTISREFSWSWSQV*WWRKVL Trigger: CAATACCTTTCTCCACCACCACACCTGACTCCATGA...CCATGAGAACTCTCTACTAATTGTGGACTTCTGTCTCTTGAGGATTAGGTGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| 3UTR CAA 90 bp | TTCTTCTGCCTCTCCTGTATTTCTTGCATCAAAATCCTAAATGTCTaGCCTCTCTCTCTGTGCCCAGCCATTGGCTGCATGAAACTTTAT | + |
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Preference number: 2 (lower is better) Translates to: FFCLSCISCIKILNV*PLSLCPAIGCMKLY Trigger: ATAAAGTTTCATGCAGCCAATGGCTGGGCACAGAGAGAGAGGCAAGACATTTAGGATTTTGATGCAAGAAATACAGGAGAGGCAGAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| 3UTR-3UTR CCA 90 bp | ACTATTACTGATGCTGTAGTGTGCTCACAAAAAGGGACCTGCCATGACTCACCTGGAATATTCAGAGAATaGACAGGAAGGGGATACAAT | + |
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Preference number: 2 (lower is better) Translates to: TITDAVVCSQKGTCHDSPGIFRE*TGRGYN Trigger: ATTGTATCCCCTTCCTGTCCATTCTCTGAATATTCC...AGGTGAGTCATGGCAGGTCCCTTTTTGTGAGCACACTACAGCATCAGTAATAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTTCTTGTCTGAAAGAACTGCAGGAGTAAAAATGGAGAGGAACCTGAGGAAATGGAGTCAGGTGTGGTaGTGGAGAAAGGTATTGGAT | + |
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Preference number: 2 (lower is better) Translates to: LFLSERTAGVKMERNLRKWSQVW*WRKVLD Trigger: ATCCAATACCTTTCTCCACCACCACACCTGACTCCA...TTTCCTCAGGTTCCTCTCCATTTTTACTCCTGCAGTTCTTTCAGACAAGAACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| 3UTR-3UTR GCA 90 bp | ATGCGAATGGTTGAAGGGAGACATGGGAACAGATATAATTACAGTGCTTACATAGGACCTTATATGAAATaGCCTACAGTAGTAAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: MRMVEGRHGNRYNYSAYIGPYMK*PTVVRG Trigger: CCCTCTTACTACTGTAGGGCATTTCATATAAGGTCC...TATGTAAGCACTGTAATTATATCTGTTCCCATGTCTCCCTTCAACCATTCGCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| 3UTR CCA 72 bp | ATCCCTCCTGGGAGGAAGAAGGAGGCAATCTCAGGATaGGACAGGGAGGGTGGGAACTGTGTGGAGAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: IPPGRKKEAISG*DREGGNCVEKE Trigger: CTCCTTCTCCACACAGTTCCCACCCTCCCTGTCCCATCCTGAGATTGCCTCCTTCTTCCTCCCAGGAGGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| 3UTR GCA 72 bp | CTCCCAGGGCTGCTTTACCCTTTGCACCTGAATTTCTaGCATCGAGGAGTGGTCTGTCCTACACCGTTCTCA | + |
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Preference number: 3 (lower is better) Translates to: LPGLLYPLHLNF*HRGVVCPTPFS Trigger: TGAGAACGGTGTAGGACAGACCACTCCTCGATGGCAGAAATTCAGGTGCAAAGGGTAAAGCAGCCCTGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| 3UTR GCA 72 bp | GCTCCAAGGCCTGACACTATTACTGATGCTGTAGTGTaGTCACAAAAAGGGACCTGCCATGACTCACCTCTG | + |
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Preference number: 3 (lower is better) Translates to: APRPDTITDAVV*SQKGTCHDSPL Trigger: CAGAGGTGAGTCATGGCAGGTCCCTTTTTGTGAGCACACTACAGCATCAGTAATAGTGTCAGGCCTTGGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| 3UTR CCA 72 bp | GCCCCCTACACAAATACAGCAGAGGACAGCAGGATCTaGACTCAGTCAGAGAAGATGCACCTAATCCTCAAG | + |
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Preference number: 3 (lower is better) Translates to: APYTNTAEDSRI*TQSEKMHLILK Trigger: CTTGAGGATTAGGTGCATCTTCTCTGACTGAGTCCAGATCCTGCTGTCCTCTGCTGTATTTGTGTAGGGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| 3UTR TCA 72 bp | CCAAATCGATGGGCAGAAGCTGCTGTCCCTGGTGGTTaGATTATTGAAAAGCTGGAAGAAGCTGAGGAGGAC | + |
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Preference number: 3 (lower is better) Translates to: PNRWAEAAVPGG*IIEKLEEAEED Trigger: GTCCTCCTCAGCTTCTTCCAGCTTTTCAATAATTCAACCACCAGGGACAGCAGCTTCTGCCCATCGATTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| 3UTR CCA 72 bp | CACCTCCAGCAGAAAGACAGGGCATCAAGTGTGGGATaGGGTTGCCATCTCACAGTAAAAACATTGACACAA | + |
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Preference number: 3 (lower is better) Translates to: HLQQKDRASSVG*GCHLTVKTLTQ Trigger: TTGTGTCAATGTTTTTACTGTGAGATGGCAACCCCATCCCACACTTGATGCCCTGTCTTTCTGCTGGAGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| 3UTR TCA 72 bp | TCCACAATTAGTAGAGAGTTCTCATGGGGTAGAAAGTaGGGGGTGTGGAAATTCTCATGGAGTCAGGTGTGG | + |
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Preference number: 3 (lower is better) Translates to: STISREFSWGRK*GVWKFSWSQVW Trigger: CCACACCTGACTCCATGAGAATTTCCACACCCCTCACTTTCTACCCCATGAGAACTCTCTACTAATTGTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| 3UTR CCA 72 bp | GGAGTCAGGTGTGGTGGTGGAGAAAGGTATTGGATGTaGAATATTCAGAGAATGGACAGGAAGGGGATACAA | + |
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Preference number: 3 (lower is better) Translates to: GVRCGGGERYWM*NIQRMDRKGIQ Trigger: TTGTATCCCCTTCCTGTCCATTCTCTGAATATTCCACATCCAATACCTTTCTCCACCACCACACCTGACTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| 3UTR CCA 72 bp | CTAAATCTATTTTACCTTTGCTGTTCCAGACCCTTCTaGGTAACTCTCCCAGGGCTGCTTTACCCTTTGCAC | + |
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Preference number: 3 (lower is better) Translates to: LNLFYLCCSRPF*VTLPGLLYPLH Trigger: GTGCAAAGGGTAAAGCAGCCCTGGGAGAGTTACCCAGAAGGGTCTGGAACAGCAAAGGTAAAATAGATTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| 3UTR CCA 72 bp | GGGGTGTGGAAATTCTCATGGAGTCAGGTGTGGTGGTaGAGAAAGGTATTGGATGTGGAATATTCAGAGAAT | + |
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Preference number: 3 (lower is better) Translates to: GVWKFSWSQVWW*RKVLDVEYSEN Trigger: ATTCTCTGAATATTCCACATCCAATACCTTTCTCCACCACCACACCTGACTCCATGAGAATTTCCACACCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| 3UTR-3UTR CAA 90 bp | GGAGATACAGAGACAAAGTATGGAGCAGTGACTGAAGGAAAGACCATGCAGAGTCCTATGACCAAAGCCTaGACATTCTACAAAACAGTT | + |
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Preference number: 3 (lower is better) Translates to: GDTETKYGAVTEGKTMQSPMTKA*TFYKTV Trigger: AACTGTTTTGTAGAATGTCAAGGCTTTGGTCATAGG...ACTCTGCATGGTCTTTCCTTCAGTCACTGCTCCATACTTTGTCTCTGTATCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| 3UTR GCA 72 bp | ATTACTGATGCTGTAGTGTGCTCACAAAAAGGGACCTaGCATGACTCACCTCTGAAAGATAAAACAAGCATG | + |
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Preference number: 3 (lower is better) Translates to: ITDAVVCSQKGT*HDSPLKDKTSM Trigger: CATGCTTGTTTTATCTTTCAGAGGTGAGTCATGGCAGGTCCCTTTTTGTGAGCACACTACAGCATCAGTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| 3UTR CAA 72 bp | GATGGGCAGAAGCTGCTGTCCCTGGTGGTTGAATTATaGAAAAGCTGGAAGAAGCTGAGGAGGACAACCCTA | + |
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Preference number: 4 (lower is better) Translates to: DGQKLLSLVVEL*KSWKKLRRTTL Trigger: TAGGGTTGTCCTCCTCAGCTTCTTCCAGCTTTTCAATAATTCAACCACCAGGGACAGCAGCTTCTGCCCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| CDS-3UTR CCA 90 bp | GGAGATACAGAGACAAAGTATGGAGCAGTGACTGAAGGAAAGACCATGCAGAGTGAAGAGCAGGAAGAGTaGCAGCTGGAGTTCTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: GDTETKYGAVTEGKTMQSEEQEE*QLEFWL Trigger: AAGCCAGAACTCCAGCTGCCACTCTTCCTGCTCTTC...ACTCTGCATGGTCTTTCCTTCAGTCACTGCTCCATACTTTGTCTCTGTATCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| CDS-3UTR TCA 90 bp | CCAAGGCCTGACACTATTACTGATGCTGTAGTGTGCTCACAAAAAGGGACCTGCTTTTCAGTGCAATACTaGCATCCTTATTCCTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: PRPDTITDAVVCSQKGTCFSVQY*HPYSSG Trigger: GCCTGAGGAATAAGGATGTCAGTATTGCACTGAAAA...GCAGGTCCCTTTTTGTGAGCACACTACAGCATCAGTAATAGTGTCAGGCCTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| CDS-3UTR CCA 90 bp | ACTCAGTCAGAGAAGATGCACCTAATCCTCAAGAGACAGAAGTCCACAATTAGTAGGAAGAGTGGCAGCTaGAGTTCTGGCTTCTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: TQSEKMHLILKRQKSTISRKSGS*SSGFSE Trigger: CTCAGAGAAGCCAGAACTCCAGCTGCCACTCTTCCT...ACTAATTGTGGACTTCTGTCTCTTGAGGATTAGGTGCATCTTCTCTGACTGAGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| CDS-3UTR TCA 90 bp | ATGCGAATGGTTGAAGGGAGACATGGGAACAGATATAATTACAGTGCTTACATATTGCCCTCCCTGGAGTaGATGGAGAGGATGGTGACA | + |
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Preference number: 4 (lower is better) Translates to: MRMVEGRHGNRYNYSAYILPSLE*MERMVT Trigger: TGTCACCATCCTCTCCATTCACTCCAGGGAGGGCAA...TATGTAAGCACTGTAATTATATCTGTTCCCATGTCTCCCTTCAACCATTCGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| CDS-3UTR TCA 90 bp | CCTGACACTATTACTGATGCTGTAGTGTGCTCACAAAAAGGGACCTGCCATGACATTCAGAGTAGGAAATaGTGTTCATCTCTGTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: PDTITDAVVCSQKGTCHDIQSRK*CSSLSE Trigger: TTCTGACAGAGATGAACATCATTTCCTACTCTGAAT...GTCATGGCAGGTCCCTTTTTGTGAGCACACTACAGCATCAGTAATAGTGTCAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| CDS-3UTR CCA 90 bp | CTCATGGAGTCAGGTGTGGTGGTGGAGAAAGGTATTGGATGTGGAATATTCAGAGCAACAGCAGAGATGTaGGTACTACAAGTACTAAAA | + |
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Preference number: 4 (lower is better) Translates to: LMESGVVVEKGIGCGIFRATAEM*VLQVLK Trigger: TTTTAGTACTTGTAGTACCCACATCTCTGCTGTTGC...TCTGAATATTCCACATCCAATACCTTTCTCCACCACCACACCTGACTCCATGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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| 3UTR CAA 72 bp | ATAGTGGACTCTCTTCTTCTGCCTCTCCTGTATTTCTaGCATCAAAATCCTAAATGTCTTGCCTCTCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: IVDSLLLPLLYF*HQNPKCLASLS Trigger: AGAGAGAGAGGCAAGACATTTAGGATTTTGATGCAAGAAATACAGGAGAGGCAGAAGAAGAGAGTCCACTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213472.2 |
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