Pregenerated sensors for OLFR1509 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035626Ensembl transcript IDs: ENSMUST00000045066.3, ENSMUST00000205900.3, ENSMUST00000206100.2, ENSMUST00000215030.2
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGCCTCAGTAGGAGAGGATGCGCCTAATCCTGTAGAGATCAGATaGCCCAAGGAAGGGAAATTCAGGGGGTTAGGGGCAGATGGGAGC | + |
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Preference number: 1 (lower is better) Translates to: LASVGEDAPNPVEIR*PKEGKFRGLGADGS Trigger: GCTCCCATCTGCCCCTAACCCCCTGAATTTCCCTTCCTTGGGGCATCTGATCTCTACAGGATTAGGCGCATCCTCTCCTACTGAGGCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| 3UTR TCA 90 bp | CTAAGCCACCAACCAAAGAGCATACATGGTCTGGTCTGTGACCCATaGCATATATGTAGCAGGAAACTACCTCCTCTGGCCTCAGTAGGA | + |
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Preference number: 1 (lower is better) Translates to: LSHQPKSIHGLVCDP*HICSRKLPPLASVG Trigger: TCCTACTGAGGCCAGAGGAGGTAGTTTCCTGCTACATATATGTCATGGGTCACAGACCAGACCATGTATGCTCTTTGGTTGGTGGCTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGCAAAGGGGAGTAGGAAGGGGTGAAGAACTCTGGAACGGAGGACTGGAAGCCATATCAAGCCAATaGATAGTAAAACAAATCTCA | + |
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Preference number: 2 (lower is better) Translates to: QRQRGVGRGEELWNGGLEAISSQ*IVKQIS Trigger: TGAGATTTGTTTTACTATCCATTGGCTTGATATGGC...TTCCAGTCCTCCGTTCCAGAGTTCTTCACCCCTTCCTACTCCCCTTTGCCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| 3UTR GCA 72 bp | GTAGGAGAGGATGCGCCTAATCCTGTAGAGATCAGATaGCCCAAGGAAGGGAAATTCAGGGGGTTAGGGGCA | + |
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Preference number: 3 (lower is better) Translates to: VGEDAPNPVEIR*PKEGKFRGLGA Trigger: TGCCCCTAACCCCCTGAATTTCCCTTCCTTGGGGCATCTGATCTCTACAGGATTAGGCGCATCCTCTCCTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| 3UTR TCA 72 bp | CAACCAAAGAGCATACATGGTCTGGTCTGTGACCCATaGCATATATGTAGCAGGAAACTACCTCCTCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: QPKSIHGLVCDP*HICSRKLPPLA Trigger: GGCCAGAGGAGGTAGTTTCCTGCTACATATATGTCATGGGTCACAGACCAGACCATGTATGCTCTTTGGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| 3UTR CCA 72 bp | ACAAATAAAACCACTGGACTGAGGTCAGGGACTCTATaGAAGTTAGGGGAACTGGAGAAGCTGAAGGGCATC | + |
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Preference number: 3 (lower is better) Translates to: TNKTTGLRSGTL*KLGELEKLKGI Trigger: GATGCCCTTCAGCTTCTCCAGTTCCCCTAACTTCCATAGAGTCCCTGACCTCAGTCCAGTGGTTTTATTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| CDS-3UTR CCA 90 bp | CAGAGGCAAAGGGGAGTAGGAAGGGGTGAAGAACTCTGGAACGGAGGACTGGAAAGTGGGCTGAGCAGGTaGACAGGGCTTTCCGACGAC | + |
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Preference number: 4 (lower is better) Translates to: QRQRGVGRGEELWNGGLESGLSR*TGLSDD Trigger: GTCGTCGGAAAGCCCTGTCCACCTGCTCAGCCCACT...TTCCAGTCCTCCGTTCCAGAGTTCTTCACCCCTTCCTACTCCCCTTTGCCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| CDS-3UTR CCA 90 bp | CAGAGGCAAAGGGGAGTAGGAAGGGGTGAAGAACTCTGGAACGGAGGACTGGAAGCGACCACCATGAAGTaGGCTGAGCAGGTGGACAGG | + |
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Preference number: 4 (lower is better) Translates to: QRQRGVGRGEELWNGGLEATTMK*AEQVDR Trigger: CCTGTCCACCTGCTCAGCCCACTTCATGGTGGTCGC...TTCCAGTCCTCCGTTCCAGAGTTCTTCACCCCTTCCTACTCCCCTTTGCCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| CDS-3UTR TCA 90 bp | CAGAGGCAAAGGGGAGTAGGAAGGGGTGAAGAACTCTGGAACGGAGGACTGGAAGGGCACGGTGACAGATaGGTGGCAGATGTCAATGAA | + |
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Preference number: 4 (lower is better) Translates to: QRQRGVGRGEELWNGGLEGHGDR*VADVNE Trigger: TTCATTGACATCTGCCACTCATCTGTCACCGTGCCC...TTCCAGTCCTCCGTTCCAGAGTTCTTCACCCCTTCCTACTCCCCTTTGCCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| CDS-3UTR GCA 90 bp | CAGAGGCAAAGGGGAGTAGGAAGGGGTGAAGAACTCTGGAACGGAGGACTGGAATGTCGATGGAGAAGCTaGTATCTGGCCGAGTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: QRQRGVGRGEELWNGGLECRWRS*YLAECR Trigger: TCTACACTCGGCCAGATAGCAGCTTCTCCATCGACA...TTCCAGTCCTCCGTTCCAGAGTTCTTCACCCCTTCCTACTCCCCTTTGCCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| CDS-3UTR CCA 90 bp | CAGAGGCAAAGGGGAGTAGGAAGGGGTGAAGAACTCTGGAACGGAGGACTGGAAATACCACCTTGTCGATaGAGAAGCTGCTATCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: QRQRGVGRGEELWNGGLEIPPCR*RSCYLA Trigger: GGCCAGATAGCAGCTTCTCCATCGACAAGGTGGTAT...TTCCAGTCCTCCGTTCCAGAGTTCTTCACCCCTTCCTACTCCCCTTTGCCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| CDS-3UTR TCA 90 bp | ATTTTCGGAGCTGGAGAAATGGCTCAGCGTTTAAGAGCACTTGTTACTTCCACAACAGGGCGACCACCATaGAGTGGGCTGAGCAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: IFGAGEMAQRLRALVTSTTGRPP*SGLSRW Trigger: CCACCTGCTCAGCCCACTTCATGGTGGTCGCCCTGT...TGTGGAAGTAACAAGTGCTCTTAAACGCTGAGCCATTTCTCCAGCTCCGAAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| CDS-3UTR GCA 90 bp | CAGAGGCAAAGGGGAGTAGGAAGGGGTGAAGAACTCTGGAACGGAGGACTGGAACGTCTCTGCCTGAGATaGTTCATGGCAGTTTTCACT | + |
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Preference number: 4 (lower is better) Translates to: QRQRGVGRGEELWNGGLERLCLR*FMAVFT Trigger: AGTGAAAACTGCCATGAAGCATCTCAGGCAGAGACG...TTCCAGTCCTCCGTTCCAGAGTTCTTCACCCCTTCCTACTCCCCTTTGCCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| CDS-3UTR GCA 90 bp | CAGAGGCAAAGGGGAGTAGGAAGGGGTGAAGAACTCTGGAACGGAGGACTGGAAGAGCAAATTCGTCTCTaGCTGAGATGCTTCATGGCA | + |
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Preference number: 4 (lower is better) Translates to: QRQRGVGRGEELWNGGLEEQIRL*LRCFMA Trigger: TGCCATGAAGCATCTCAGGCAGAGACGAATTTGCTC...TTCCAGTCCTCCGTTCCAGAGTTCTTCACCCCTTCCTACTCCCCTTTGCCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| CDS-3UTR CCA 90 bp | CAGAGGCAAAGGGGAGTAGGAAGGGGTGAAGAACTCTGGAACGGAGGACTGGAAAAGTACATGGGATTGTaGAGACGTGGCGTGAAGACT | + |
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Preference number: 4 (lower is better) Translates to: QRQRGVGRGEELWNGGLEKYMGL*RRGVKT Trigger: AGTCTTCACGCCACGTCTCCACAATCCCATGTACTT...TTCCAGTCCTCCGTTCCAGAGTTCTTCACCCCTTCCTACTCCCCTTTGCCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| CDS-3UTR TCA 90 bp | CAGAGGCAAAGGGGAGTAGGAAGGGGTGAAGAACTCTGGAACGGAGGACTGGAAAGTGGCAGATGTCAATaGAGGACAGATTGCTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: QRQRGVGRGEELWNGGLESGRCQ*RTDCSE Trigger: TTCTGAGCAATCTGTCCTTCATTGACATCTGCCACT...TTCCAGTCCTCCGTTCCAGAGTTCTTCACCCCTTCCTACTCCCCTTTGCCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| CDS-3UTR TCA 90 bp | CAGAGGCAAAGGGGAGTAGGAAGGGGTGAAGAACTCTGGAACGGAGGACTGGAAAAATTCGTCTCTGCCTaGGATGCTTCATGGCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: QRQRGVGRGEELWNGGLEKFVSA*DASWQF Trigger: AAACTGCCATGAAGCATCTCAGGCAGAGACGAATTT...TTCCAGTCCTCCGTTCCAGAGTTCTTCACCCCTTCCTACTCCCCTTTGCCTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| CDS-3UTR CCA 90 bp | CAGAGGCAAAGGGGAGTAGGAAGGGGTGAAGAACTCTGGAACGGAGGACTGGAAAGATGGTTCCACTATTaGACACGATCAGAATCCCTG | + |
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Preference number: 4 (lower is better) Translates to: QRQRGVGRGEELWNGGLERWFHY*TRSESL Trigger: CAGGGATTCTGATCGTGTCCAATAGTGGAACCATCT...TTCCAGTCCTCCGTTCCAGAGTTCTTCACCCCTTCCTACTCCCCTTTGCCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| CDS-3UTR CCA 90 bp | CAGAGGCAAAGGGGAGTAGGAAGGGGTGAAGAACTCTGGAACGGAGGACTGGAAAACATACGAGGGAGATaGTTCCACTATTGGACACGA | + |
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Preference number: 4 (lower is better) Translates to: QRQRGVGRGEELWNGGLENIRGR*FHYWTR Trigger: TCGTGTCCAATAGTGGAACCATCTCCCTCGTATGTT...TTCCAGTCCTCCGTTCCAGAGTTCTTCACCCCTTCCTACTCCCCTTTGCCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| CDS-3UTR CCA 90 bp | ATTTTCGGAGCTGGAGAAATGGCTCAGCGTTTAAGAGCACTTGTTACTTCCACAAGTGGGCTGAGCAGGTaGACAGGGCTTTCCGACGAC | + |
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Preference number: 4 (lower is better) Translates to: IFGAGEMAQRLRALVTSTSGLSR*TGLSDD Trigger: GTCGTCGGAAAGCCCTGTCCACCTGCTCAGCCCACT...TGTGGAAGTAACAAGTGCTCTTAAACGCTGAGCCATTTCTCCAGCTCCGAAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| CDS-3UTR CCA 90 bp | CAGAGGCAAAGGGGAGTAGGAAGGGGTGAAGAACTCTGGAACGGAGGACTGGAAATTGGAGTAATGCAATaGGATGCAGATAGCCACATA | + |
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Preference number: 4 (lower is better) Translates to: QRQRGVGRGEELWNGGLEIGVMQ*DADSHI Trigger: TATGTGGCTATCTGCATCCCATTGCATTACTCCAAT...TTCCAGTCCTCCGTTCCAGAGTTCTTCACCCCTTCCTACTCCCCTTTGCCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| CDS-3UTR CCA 90 bp | CAGAGGCAAAGGGGAGTAGGAAGGGGTGAAGAACTCTGGAACGGAGGACTGGAATCATGTTCATCACATTaGAGTAATGCAATGGGATGC | + |
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Preference number: 4 (lower is better) Translates to: QRQRGVGRGEELWNGGLESCSSH*SNAMGC Trigger: GCATCCCATTGCATTACTCCAATGTGATGAACATGA...TTCCAGTCCTCCGTTCCAGAGTTCTTCACCCCTTCCTACTCCCCTTTGCCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| CDS-3UTR TCA 90 bp | ATTTTCGGAGCTGGAGAAATGGCTCAGCGTTTAAGAGCACTTGTTACTTCCACAGGGCACGGTGACAGATaGGTGGCAGATGTCAATGAA | + |
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Preference number: 4 (lower is better) Translates to: IFGAGEMAQRLRALVTSTGHGDR*VADVNE Trigger: TTCATTGACATCTGCCACTCATCTGTCACCGTGCCC...TGTGGAAGTAACAAGTGCTCTTAAACGCTGAGCCATTTCTCCAGCTCCGAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| CDS-3UTR CCA 90 bp | ATTTTCGGAGCTGGAGAAATGGCTCAGCGTTTAAGAGCACTTGTTACTTCCACAATACCACCTTGTCGATaGAGAAGCTGCTATCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: IFGAGEMAQRLRALVTSTIPPCR*RSCYLA Trigger: GGCCAGATAGCAGCTTCTCCATCGACAAGGTGGTAT...TGTGGAAGTAACAAGTGCTCTTAAACGCTGAGCCATTTCTCCAGCTCCGAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| CDS-3UTR GCA 90 bp | ATTTTCGGAGCTGGAGAAATGGCTCAGCGTTTAAGAGCACTTGTTACTTCCACACGTCTCTGCCTGAGATaGTTCATGGCAGTTTTCACT | + |
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Preference number: 4 (lower is better) Translates to: IFGAGEMAQRLRALVTSTRLCLR*FMAVFT Trigger: AGTGAAAACTGCCATGAAGCATCTCAGGCAGAGACG...TGTGGAAGTAACAAGTGCTCTTAAACGCTGAGCCATTTCTCCAGCTCCGAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| CDS-3UTR GCA 90 bp | ATTTTCGGAGCTGGAGAAATGGCTCAGCGTTTAAGAGCACTTGTTACTTCCACAGAGCAAATTCGTCTCTaGCTGAGATGCTTCATGGCA | + |
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Preference number: 4 (lower is better) Translates to: IFGAGEMAQRLRALVTSTEQIRL*LRCFMA Trigger: TGCCATGAAGCATCTCAGGCAGAGACGAATTTGCTC...TGTGGAAGTAACAAGTGCTCTTAAACGCTGAGCCATTTCTCCAGCTCCGAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| CDS-3UTR CCA 90 bp | ATTTTCGGAGCTGGAGAAATGGCTCAGCGTTTAAGAGCACTTGTTACTTCCACAAAGTACATGGGATTGTaGAGACGTGGCGTGAAGACT | + |
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Preference number: 4 (lower is better) Translates to: IFGAGEMAQRLRALVTSTKYMGL*RRGVKT Trigger: AGTCTTCACGCCACGTCTCCACAATCCCATGTACTT...TGTGGAAGTAACAAGTGCTCTTAAACGCTGAGCCATTTCTCCAGCTCCGAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| CDS-3UTR TCA 90 bp | ATTTTCGGAGCTGGAGAAATGGCTCAGCGTTTAAGAGCACTTGTTACTTCCACAAGTGGCAGATGTCAATaGAGGACAGATTGCTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: IFGAGEMAQRLRALVTSTSGRCQ*RTDCSE Trigger: TTCTGAGCAATCTGTCCTTCATTGACATCTGCCACT...TGTGGAAGTAACAAGTGCTCTTAAACGCTGAGCCATTTCTCCAGCTCCGAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| CDS-3UTR CCA 90 bp | ATTTTCGGAGCTGGAGAAATGGCTCAGCGTTTAAGAGCACTTGTTACTTCCACAAACATACGAGGGAGATaGTTCCACTATTGGACACGA | + |
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Preference number: 4 (lower is better) Translates to: IFGAGEMAQRLRALVTSTNIRGR*FHYWTR Trigger: TCGTGTCCAATAGTGGAACCATCTCCCTCGTATGTT...TGTGGAAGTAACAAGTGCTCTTAAACGCTGAGCCATTTCTCCAGCTCCGAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| CDS-3UTR CCA 90 bp | ATTTTCGGAGCTGGAGAAATGGCTCAGCGTTTAAGAGCACTTGTTACTTCCACATCATGTTCATCACATTaGAGTAATGCAATGGGATGC | + |
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Preference number: 4 (lower is better) Translates to: IFGAGEMAQRLRALVTSTSCSSH*SNAMGC Trigger: GCATCCCATTGCATTACTCCAATGTGATGAACATGA...TGTGGAAGTAACAAGTGCTCTTAAACGCTGAGCCATTTCTCCAGCTCCGAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| CDS-3UTR CAA 90 bp | CAGAGGCAAAGGGGAGTAGGAAGGGGTGAAGAACTCTGGAACGGAGGACTGGAAATCTCCAACACCCAGTaGTCAGTGAGGCCCAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: QRQRGVGRGEELWNGGLEISNTQ*SVRPRK Trigger: CTTCCTGGGCCTCACTGACAACTGGGTGTTGGAGAT...TTCCAGTCCTCCGTTCCAGAGTTCTTCACCCCTTCCTACTCCCCTTTGCCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| CDS-3UTR CAA 90 bp | CAGAGGCAAAGGGGAGTAGGAAGGGGTGAAGAACTCTGGAACGGAGGACTGGAAAAGAAGTACATGGGATaGTGGAGACGTGGCGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: QRQRGVGRGEELWNGGLEKKYMG*WRRGVK Trigger: CTTCACGCCACGTCTCCACAATCCCATGTACTTCTT...TTCCAGTCCTCCGTTCCAGAGTTCTTCACCCCTTCCTACTCCCCTTTGCCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| CDS-3UTR CAA 90 bp | CAGAGGCAAAGGGGAGTAGGAAGGGGTGAAGAACTCTGGAACGGAGGACTGGAAGAGATGGTTCCACTATaGGACACGATCAGAATCCCT | + |
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Preference number: 5 (lower is better) Translates to: QRQRGVGRGEELWNGGLEEMVPL*DTIRIP Trigger: AGGGATTCTGATCGTGTCCAATAGTGGAACCATCTC...TTCCAGTCCTCCGTTCCAGAGTTCTTCACCCCTTCCTACTCCCCTTTGCCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| CDS-3UTR CAA 90 bp | CAGAGGCAAAGGGGAGTAGGAAGGGGTGAAGAACTCTGGAACGGAGGACTGGAAAAAACCGATACCACCTaGTCGATGGAGAAGCTGCTA | + |
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Preference number: 5 (lower is better) Translates to: QRQRGVGRGEELWNGGLEKTDTT*SMEKLL Trigger: TAGCAGCTTCTCCATCGACAAGGTGGTATCGGTTTT...TTCCAGTCCTCCGTTCCAGAGTTCTTCACCCCTTCCTACTCCCCTTTGCCTCTG 52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| CDS-3UTR CAA 90 bp | ATTTTCGGAGCTGGAGAAATGGCTCAGCGTTTAAGAGCACTTGTTACTTCCACAATCTCCAACACCCAGTaGTCAGTGAGGCCCAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: IFGAGEMAQRLRALVTSTISNTQ*SVRPRK Trigger: CTTCCTGGGCCTCACTGACAACTGGGTGTTGGAGAT...TGTGGAAGTAACAAGTGCTCTTAAACGCTGAGCCATTTCTCCAGCTCCGAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| CDS-3UTR CAA 90 bp | ATTTTCGGAGCTGGAGAAATGGCTCAGCGTTTAAGAGCACTTGTTACTTCCACAAAGAAGTACATGGGATaGTGGAGACGTGGCGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: IFGAGEMAQRLRALVTSTKKYMG*WRRGVK Trigger: CTTCACGCCACGTCTCCACAATCCCATGTACTTCTT...TGTGGAAGTAACAAGTGCTCTTAAACGCTGAGCCATTTCTCCAGCTCCGAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| CDS-3UTR CAA 90 bp | ATTTTCGGAGCTGGAGAAATGGCTCAGCGTTTAAGAGCACTTGTTACTTCCACAAAAACCGATACCACCTaGTCGATGGAGAAGCTGCTA | + |
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Preference number: 5 (lower is better) Translates to: IFGAGEMAQRLRALVTSTKTDTT*SMEKLL Trigger: TAGCAGCTTCTCCATCGACAAGGTGGTATCGGTTTT...TGTGGAAGTAACAAGTGCTCTTAAACGCTGAGCCATTTCTCCAGCTCCGAAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205900.3 ENSMUST00000215030.2 |
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| CDS GCA 72 bp | TGTAGAAAACCGATACCACCTTGTCGATGGAGAAGCTaGTATCTGGCCGAGTGTAGAGGAAGATACATGGCC | + |
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Preference number: 6 (lower is better) Translates to: CRKPIPPCRWRS*YLAECRGRYMA Trigger: GGCCATGTATCTTCCTCTACACTCGGCCAGATAGCAGCTTCTCCATCGACAAGGTGGTATCGGTTTTCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045066.3 ENSMUST00000205900.3 ENSMUST00000206100.2 ENSMUST00000215030.2 |
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| CDS CAA 90 bp | GAAGTGACCAAGGCTAGAAAACATACGAGGGAGATGGTTCCACTATaGGACACGATCAGAATCCCTGTAAGGTATGTATCTGTGCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: EVTKARKHTREMVPL*DTIRIPVRYVSVQA Trigger: GGCCTGCACAGATACATACCTTACAGGGATTCTGATCGTGTCCAATAGTGGAACCATCTCCCTCGTATGTTTTCTAGCCTTGGTCACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045066.3 ENSMUST00000205900.3 ENSMUST00000206100.2 ENSMUST00000215030.2 |
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| CDS CAA 72 bp | AAGGCTAGAAAACATACGAGGGAGATGGTTCCACTATaGGACACGATCAGAATCCCTGTAAGGTATGTATCT | + |
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Preference number: 6 (lower is better) Translates to: KARKHTREMVPL*DTIRIPVRYVS Trigger: AGATACATACCTTACAGGGATTCTGATCGTGTCCAATAGTGGAACCATCTCCCTCGTATGTTTTCTAGCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045066.3 ENSMUST00000205900.3 ENSMUST00000206100.2 ENSMUST00000215030.2 |
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