Pregenerated sensors for OLFR1508 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057564Ensembl transcript IDs: ENSMUST00000206520.3
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACAGATTTTTCATTTCTTCAGTGCCCTTCTGCTGCCAGCCTGCCCTaGTATCTAGGCTGTCCCCATAGTGGTTGTCACTTGGAACAAGCA | + |
|
Preference number: 1 (lower is better) Translates to: TDFSFLQCPSAASLP*YLGCPHSGCHLEQA Trigger: TGCTTGTTCCAAGTGACAACCACTATGGGGACAGCCTAGATAGCAGGGCAGGCTGGCAGCAGAAGGGCACTGAAGAAATGAAAAATCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR CCA 90 bp | GTGACTGCTAGGCAACATTGGGTGATGTTGCCTTTTCTATCAGTATaGGTTCCTCTGCTGATTGCTGCATACAGGGGCTCTGTTTGTACT | + |
|
Preference number: 1 (lower is better) Translates to: VTARQHWVMLPFLSV*VPLLIAAYRGSVCT Trigger: AGTACAAACAGAGCCCCTGTATGCAGCAATCAGCAGAGGAACCCATACTGATAGAAAAGGCAACATCACCCAATGTTGCCTAGCAGTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR GCA 90 bp | AGGCACAATTCTTTGTTTACCAATTCCATTTGTCACACACCTCTTTaGTGTGCTGCAGGCCACCCCAGAGAAATTAAAGGTGCTGGGTAT | + |
|
Preference number: 1 (lower is better) Translates to: RHNSLFTNSICHTPL*CAAGHPREIKGAGY Trigger: ATACCCAGCACCTTTAATTTCTCTGGGGTGGCCTGCAGCACAGCAAAGAGGTGTGTGACAAATGGAATTGGTAAACAAAGAATTGTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR TCA 90 bp | TTCAGGGAGTTAGGTTTGGGGAAAGAAAGCATGGTATTGATGAGCTaGTGTGTCTATGGGAAATTAACATGCCCTACCTTAGGGTACACC | + |
|
Preference number: 1 (lower is better) Translates to: FRELGLGKESMVLMS*CVYGKLTCPTLGYT Trigger: GGTGTACCCTAAGGTAGGGCATGTTAATTTCCCATAGACACATCAGCTCATCAATACCATGCTTTCTTTCCCCAAACCTAACTCCCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR TCA 90 bp | AGCTATTCAAGGTGTTACAGTCTTGTAAGCATAGCTCCTGGGAGGTaGGGGCAAAAGGATAATGAATTAAGGGCGAGCCTCAGTAATACA | + |
|
Preference number: 1 (lower is better) Translates to: SYSRCYSLVSIAPGR*GQKDNELRASLSNT Trigger: TGTATTACTGAGGCTCGCCCTTAATTCATTATCCTTTTGCCCTCACCTCCCAGGAGCTATGCTTACAAGACTGTAACACCTTGAATAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR CCA 90 bp | AGGTTTGGGGAAAGAAAGCATGGTATTGATGAGCTGATGTGTCTATaGGAAATTAACATGCCCTACCTTAGGGTACACCCTGTACCCTAT | + |
|
Preference number: 1 (lower is better) Translates to: RFGERKHGIDELMCL*EINMPYLRVHPVPY Trigger: ATAGGGTACAGGGTGTACCCTAAGGTAGGGCATGTTAATTTCCCATAGACACATCAGCTCATCAATACCATGCTTTCTTTCCCCAAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR CCA 90 bp | AGTGACAATTCACAGGTGACAGCTTTAGTGACTGCTAGGCAACATTaGGTGATGTTGCCTTTTCTATCAGTATGGGTTCCTCTGCTGATT | + |
|
Preference number: 1 (lower is better) Translates to: SDNSQVTALVTARQH*VMLPFLSVWVPLLI Trigger: AATCAGCAGAGGAACCCATACTGATAGAAAAGGCAACATCACCCAATGTTGCCTAGCAGTCACTAAAGCTGTCACCTGTGAATTGTCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR GCA 90 bp | AGTGCTCTTGACAGAGAGAAGAAAGCAGAAAATCTCAGAGGGAGATaGAACCAGGAAAGATTGTTGTCTTTGATGATGAAGGGACCAACA | + |
|
Preference number: 1 (lower is better) Translates to: SALDREKKAENLRGR*NQERLLSLMMKGPT Trigger: TGTTGGTCCCTTCATCATCAAAGACAACAATCTTTCCTGGTTGCATCTCCCTCTGAGATTTTCTGCTTTCTTCTCTCTGTCAAGAGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR TCA 90 bp | CACTTGAGAATTCATTTAGGCAAACATCGAAATGAGCAATGTACATaGGAGTGGTCCAGAAATCTGGTCTTGTTTAGATTGCTGGTTAAT | + |
|
Preference number: 1 (lower is better) Translates to: HLRIHLGKHRNEQCT*EWSRNLVLFRLLVN Trigger: ATTAACCAGCAATCTAAACAAGACCAGATTTCTGGACCACTCTCATGTACATTGCTCATTTCGATGTTTGCCTAAATGAATTCTCAAGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR TCA 90 bp | AAAATGAAACTGAGATTTCAGAAAACATGCCATCTTCCTGATACCTaGAGCTTGTCCAGGTGTTGTTCATTGAATGTCTGGATTACATTG | + |
|
Preference number: 1 (lower is better) Translates to: KMKLRFQKTCHLPDT*SLSRCCSLNVWITL Trigger: CAATGTAATCCAGACATTCAATGAACAACACCTGGACAAGCTTCAGGTATCAGGAAGATGGCATGTTTTCTGAAATCTCAGTTTCATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR TCA 90 bp | AAATTGGAAAATGAAACTGAGATTTCAGAAAACATGCCATCTTCCTaGTACCTGAAGCTTGTCCAGGTGTTGTTCATTGAATGTCTGGAT | + |
|
Preference number: 1 (lower is better) Translates to: KLENETEISENMPSS*YLKLVQVLFIECLD Trigger: ATCCAGACATTCAATGAACAACACCTGGACAAGCTTCAGGTATCAGGAAGATGGCATGTTTTCTGAAATCTCAGTTTCATTTTCCAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR GCA 90 bp | AGCAATGTACATGAGAGTGGTCCAGAAATCTGGTCTTGTTTAGATTaGTGGTTAATTGAAAAGCAGGAAGAACAGAATGAGATAATGAAT | + |
|
Preference number: 1 (lower is better) Translates to: SNVHESGPEIWSCLD*WLIEKQEEQNEIMN Trigger: ATTCATTATCTCATTCTGTTCTTCCTGCTTTTCAATTAACCAGCAATCTAAACAAGACCAGATTTCTGGACCACTCTCATGTACATTGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR GCA 90 bp | CCACCGAACTGCAATGCAATGTTTACGGTGTTTAAAGCACTATGTTaGAGTAGTTTGGTTATAACACCAATACAAATATTAGTGTCAGTA | + |
|
Preference number: 1 (lower is better) Translates to: PPNCNAMFTVFKALC*SSLVITPIQILVSV Trigger: TACTGACACTAATATTTGTATTGGTGTTATAACCAAACTACTGCAACATAGTGCTTTAAACACCGTAAACATTGCATTGCAGTTCGGTGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR-3UTR GCA 90 bp | GGACCCAGACAATATGGGCATAGGTACTCACAGACATATAAAGTGCAGAGTGAATGTCACACACCTCTTTaGTGTGCTGCAGGCCACCCC | + |
|
Preference number: 2 (lower is better) Translates to: GPRQYGHRYSQTYKVQSECHTPL*CAAGHP Trigger: GGGGTGGCCTGCAGCACAGCAAAGAGGTGTGTGACA...TTCACTCTGCACTTTATATGTCTGTGAGTACCTATGCCCATATTGTCTGGGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR-3UTR GCA 90 bp | TGTCACTTGGAACAAGCAGTCTCCCCACAGAGGTTTTTGTACCTGACATTTCCTTCCTGGACTGCTAAGTaGAGAACATGCTGCCCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: CHLEQAVSPQRFLYLTFPSWTAK*RTCCPC Trigger: ACAGGGGCAGCATGTTCTGCACTTAGCAGTCCAGGA...AGGAAATGTCAGGTACAAAAACCTCTGTGGGGAGACTGCTTGTTCCAAGTGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR-3UTR CCA 90 bp | GTAAGCTCTGCAGTGGTGGCATACACCTTTAATCCCAGAACATGGGAGGCAAAGATAGTGGTTGTCACTTaGAACAAGCAGTCTCCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: VSSAVVAYTFNPRTWEAKIVVVT*NKQSPH Trigger: GTGGGGAGACTGCTTGTTCCAAGTGACAACCACTAT...CTTTGCCTCCCATGTTCTGGGATTAAAGGTGTATGCCACCACTGCAGAGCTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR-3UTR CCA 90 bp | GTAAGCTCTGCAGTGGTGGCATACACCTTTAATCCCAGAACATGGGAGGCAAAGCTCAAAAGGGTTTCCTaGACTGCTAAGTGCAGAACA | + |
|
Preference number: 2 (lower is better) Translates to: VSSAVVAYTFNPRTWEAKLKRVS*TAKCRT Trigger: TGTTCTGCACTTAGCAGTCCAGGAAACCCTTTTGAG...CTTTGCCTCCCATGTTCTGGGATTAAAGGTGTATGCCACCACTGCAGAGCTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR-3UTR GCA 90 bp | ACTGCTAAGTGCAGAACATGCTGCCCCTGTCAGTCCATGACACTCACTCTGTTCAGCGTGTTGGTGATCTaGTTTGAAATCCAATCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: TAKCRTCCPCQSMTLTLFSVLVI*FEIQSC Trigger: ACAAGATTGGATTTCAAAGCAGATCACCAACACGCT...GAACAGAGTGAGTGTCATGGACTGACAGGGGCAGCATGTTCTGCACTTAGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR-3UTR CCA 90 bp | GTAAGCTCTGCAGTGGTGGCATACACCTTTAATCCCAGAACATGGGAGGCAAAGTTTTCTCCCAGTTCTTaGAACAATAGCGTGTTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: VSSAVVAYTFNPRTWEAKFSPSS*NNSVLV Trigger: CACCAACACGCTATTGTTCCAAGAACTGGGAGAAAA...CTTTGCCTCCCATGTTCTGGGATTAAAGGTGTATGCCACCACTGCAGAGCTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR-3UTR GCA 90 bp | GGACCCAGACAATATGGGCATAGGTACTCACAGACATATAAAGTGCAGAGTGAATTTTCATTTCTTCAGTaGCCTTCTGCTGCCAGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: GPRQYGHRYSQTYKVQSEFSFLQ*PSAASL Trigger: CAGGCTGGCAGCAGAAGGGCACTGAAGAAATGAAAA...TTCACTCTGCACTTTATATGTCTGTGAGTACCTATGCCCATATTGTCTGGGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR CAA 90 bp | GAGAAGAAAGCAGAAAATCTCAGAGGGAGATGCAACCAGGAAAGATaGTTGTCTTTGATGATGAAGGGACCAACATCCCTGGAATACAAA | + |
|
Preference number: 2 (lower is better) Translates to: EKKAENLRGRCNQER*LSLMMKGPTSLEYK Trigger: TTTGTATTCCAGGGATGTTGGTCCCTTCATCATCAAAGACAACAATCTTTCCTGGTTGCATCTCCCTCTGAGATTTTCTGCTTTCTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR-3UTR TCA 90 bp | CAGAGAGAAGAAAGCAGAAAATCTCAGAGGGAGATGCAACCAGGAAAGATTGTTGTCACAGTGTATGTCTaGTTTCCAGTATGTCATGCT | + |
|
Preference number: 2 (lower is better) Translates to: QREESRKSQREMQPGKIVVTVYV*FPVCHA Trigger: AGCATGACATACTGGAAATCAGACATACACTGTGAC...AACAATCTTTCCTGGTTGCATCTCCCTCTGAGATTTTCTGCTTTCTTCTCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGAGAAGAAAGCAGAAAATCTCAGAGGGAGATGCAACCAGGAAAGATTGTTCCTTTTCTATCAGTATaGGTTCCTCTGCTGATTGCT | + |
|
Preference number: 2 (lower is better) Translates to: QREESRKSQREMQPGKIVPFLSV*VPLLIA Trigger: AGCAATCAGCAGAGGAACCCATACTGATAGAAAAGG...AACAATCTTTCCTGGTTGCATCTCCCTCTGAGATTTTCTGCTTTCTTCTCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR-3UTR TCA 90 bp | CTTGGAACAAGCAGTCTCCCCACAGAGGTTTTTGTACCTGACATTTCCTCAATTTCACAGCATTTACTTTaGTTGTTAGATGTAGGACCA | + |
|
Preference number: 2 (lower is better) Translates to: LGTSSLPTEVFVPDISSISQHLL*LLDVGP Trigger: TGGTCCTACATCTAACAATCAAAGTAAATGCTGTGA...AATTGAGGAAATGTCAGGTACAAAAACCTCTGTGGGGAGACTGCTTGTTCCAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR-3UTR TCA 90 bp | GGACCCAGACAATATGGGCATAGGTACTCACAGACATATAAAGTGCAGAGTGAAATGGTATTGATGAGCTaGTGTGTCTATGGGAAATTA | + |
|
Preference number: 2 (lower is better) Translates to: GPRQYGHRYSQTYKVQSEMVLMS*CVYGKL Trigger: TAATTTCCCATAGACACATCAGCTCATCAATACCAT...TTCACTCTGCACTTTATATGTCTGTGAGTACCTATGCCCATATTGTCTGGGTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR-3UTR GCA 90 bp | GGACCCAGACAATATGGGCATAGGTACTCACAGACATATAAAGTGCAGAGTGAATTGTGTACATTTACATaGATTGATGCTCAGACCCAT | + |
|
Preference number: 2 (lower is better) Translates to: GPRQYGHRYSQTYKVQSELCTFT*IDAQTH Trigger: ATGGGTCTGAGCATCAATGCATGTAAATGTACACAA...TTCACTCTGCACTTTATATGTCTGTGAGTACCTATGCCCATATTGTCTGGGTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR-3UTR TCA 90 bp | CAGAGAGAAGAAAGCAGAAAATCTCAGAGGGAGATGCAACCAGGAAAGATTGTTAGAGGTTTTTGTACCTaGCATTTCCTCAATTTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: QREESRKSQREMQPGKIVRGFCT*HFLNLE Trigger: TTCCAAATTGAGGAAATGTCAGGTACAAAAACCTCT...AACAATCTTTCCTGGTTGCATCTCCCTCTGAGATTTTCTGCTTTCTTCTCTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR-3UTR GCA 90 bp | TGGTCTTGTTTAGATTGCTGGTTAATTGAAAAGCAGGAAGAACAGAATGAGATAGCCAAGTACACATTCTaGACTGAGCTACATTCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: WSCLDCWLIEKQEEQNEIAKYTF*TELHSG Trigger: CCCAGAATGTAGCTCAGTGCAGAATGTGTACTTGGC...TATCTCATTCTGTTCTTCCTGCTTTTCAATTAACCAGCAATCTAAACAAGACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR-3UTR TCA 90 bp | ACAGGGGCTCTGTTTGTACTCAATCAAAATCTCTTCTCACATCTATCATTGCCTAGATTGCTGGTTAATTaGAAAGCAGGAAGAACAGAA | + |
|
Preference number: 2 (lower is better) Translates to: TGALFVLNQNLFSHLSLPRLLVN*KAGRTE Trigger: TTCTGTTCTTCCTGCTTTTCAATTAACCAGCAATCT...AGGCAATGATAGATGTGAGAAGAGATTTTGATTGAGTACAAACAGAGCCCCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR-3UTR TCA 90 bp | AGGGGCTCTGTTTGTACTCAATCAAAATCTCTTCTCACATCTATCATTGCCTATTGTAACTCTAGTGTCTaGAACTTAAAGGCAAGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: RGSVCTQSKSLLTSIIAYCNSSV*NLKARG Trigger: TCCTCTTGCCTTTAAGTTTCAGACACTAGAGTTACA...ATAGGCAATGATAGATGTGAGAAGAGATTTTGATTGAGTACAAACAGAGCCCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR-3UTR GCA 90 bp | ACAGGGGCTCTGTTTGTACTCAATCAAAATCTCTTCTCACATCTATCATTGCCTTGGTCTTGTTTAGATTaGTGGTTAATTGAAAAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: TGALFVLNQNLFSHLSLPWSCLD*WLIEKQ Trigger: CTGCTTTTCAATTAACCAGCAATCTAAACAAGACCA...AGGCAATGATAGATGTGAGAAGAGATTTTGATTGAGTACAAACAGAGCCCCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR-3UTR CCA 90 bp | AGGGGCTCTGTTTGTACTCAATCAAAATCTCTTCTCACATCTATCATTGCCTATTATGATTTTAGAGCCTaGCTTAGTTATTACACCAGG | + |
|
Preference number: 2 (lower is better) Translates to: RGSVCTQSKSLLTSIIAYYDFRA*LSYYTR Trigger: CCTGGTGTAATAACTAAGCCAGGCTCTAAAATCATA...ATAGGCAATGATAGATGTGAGAAGAGATTTTGATTGAGTACAAACAGAGCCCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR-3UTR CCA 90 bp | AAAATTCACACAATTGCAAACAGTAGTGACAATTCACAGGTGACAGCTTTAGTGATAATGTCTACAATGTaGAAGATGTTACCAGTCACA | + |
|
Preference number: 2 (lower is better) Translates to: KIHTIANSSDNSQVTALVIMSTM*KMLPVT Trigger: TGTGACTGGTAACATCTTCCACATTGTAGACATTAT...CACTAAAGCTGTCACCTGTGAATTGTCACTACTGTTTGCAATTGTGTGAATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR-3UTR CCA 90 bp | AAAATTCACACAATTGCAAACAGTAGTGACAATTCACAGGTGACAGCTTTAGTGCTTCTTCACACTGTATaGAAAAGAGTCTTAAACTCT | + |
|
Preference number: 2 (lower is better) Translates to: KIHTIANSSDNSQVTALVLLHTV*KRVLNS Trigger: AGAGTTTAAGACTCTTTTCCATACAGTGTGAAGAAG...CACTAAAGCTGTCACCTGTGAATTGTCACTACTGTTTGCAATTGTGTGAATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR GCA 72 bp | TCATTTCTTCAGTGCCCTTCTGCTGCCAGCCTGCCCTaGTATCTAGGCTGTCCCCATAGTGGTTGTCACTTG | + |
|
Preference number: 3 (lower is better) Translates to: SFLQCPSAASLP*YLGCPHSGCHL Trigger: CAAGTGACAACCACTATGGGGACAGCCTAGATAGCAGGGCAGGCTGGCAGCAGAAGGGCACTGAAGAAATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR GCA 72 bp | TGGGACTTCCTCAAAAGGGTTTCCTGGACTGCTAAGTaGAGAACATGCTGCCCCTGTCAGTCCATGACACTC | + |
|
Preference number: 3 (lower is better) Translates to: WDFLKRVSWTAK*RTCCPCQSMTL Trigger: GAGTGTCATGGACTGACAGGGGCAGCATGTTCTGCACTTAGCAGTCCAGGAAACCCTTTTGAGGAAGTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR GCA 72 bp | GGTGAACACAGATTTTTCATTTCTTCAGTGCCCTTCTaGTGCCAGCCTGCCCTGCTATCTAGGCTGTCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: GEHRFFISSVPF*CQPALLSRLSP Trigger: TGGGGACAGCCTAGATAGCAGGGCAGGCTGGCAGCAGAAGGGCACTGAAGAAATGAAAAATCTGTGTTCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR GCA 72 bp | CTCAAAAGGGTTTCCTGGACTGCTAAGTGCAGAACATaGTGCCCCTGTCAGTCCATGACACTCACTCTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: LKRVSWTAKCRT*CPCQSMTLTLF Trigger: GAACAGAGTGAGTGTCATGGACTGACAGGGGCAGCATGTTCTGCACTTAGCAGTCCAGGAAACCCTTTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR TCA 72 bp | GCCCAGGGATTTATTGATGGTATCCTCACTGATAGATaGTGGCTCAGGAGATCCAGGTTGAACTGCAGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: AQGFIDGILTDR*WLRRSRLNCSV Trigger: CACACTGCAGTTCAACCTGGATCTCCTGAGCCATCATCTATCAGTGAGGATACCATCAATAAATCCCTGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR TCA 72 bp | AGGTGTTACAGTCTTGTAAGCATAGCTCCTGGGAGGTaGGGGCAAAAGGATAATGAATTAAGGGCGAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RCYSLVSIAPGR*GQKDNELRASL Trigger: GAGGCTCGCCCTTAATTCATTATCCTTTTGCCCTCACCTCCCAGGAGCTATGCTTACAAGACTGTAACACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR GCA 72 bp | AAAAGGGTTTCCTGGACTGCTAAGTGCAGAACATGCTaGCCCTGTCAGTCCATGACACTCACTCTGTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: KRVSWTAKCRTC*PCQSMTLTLFF Trigger: AAAGAACAGAGTGAGTGTCATGGACTGACAGGGGCAGCATGTTCTGCACTTAGCAGTCCAGGAAACCCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR CCA 72 bp | CCTTTAATCCCAGAACATGGGAGGCAAAGGTCAGCCTaGTCTTTAGAGCAAGTTTCAGCACAGCCAAAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: PLIPEHGRQRSA*SLEQVSAQPKL Trigger: TAGCTTTGGCTGTGCTGAAACTTGCTCTAAAGACCAGGCTGACCTTTGCCTCCCATGTTCTGGGATTAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR CCA 72 bp | AGGCAACATTGGGTGATGTTGCCTTTTCTATCAGTATaGGTTCCTCTGCTGATTGCTGCATACAGGGGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: RQHWVMLPFLSV*VPLLIAAYRGS Trigger: AGAGCCCCTGTATGCAGCAATCAGCAGAGGAACCCATACTGATAGAAAAGGCAACATCACCCAATGTTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR TCA 72 bp | CAGGAGATCCAGGTTGAACTGCAGTGTGACTCTGACTaGTGGAGTCACAGTGTATGTCTGATTTCCAGTATG | + |
|
Preference number: 3 (lower is better) Translates to: QEIQVELQCDSD*WSHSVCLISSM Trigger: CATACTGGAAATCAGACATACACTGTGACTCCATCAGTCAGAGTCACACTGCAGTTCAACCTGGATCTCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR TCA 72 bp | CATTGCCCACATGGACATATATGTACCAGAAGTGCCTaGTGCCTATGGAGGCCAGAAGAAGTTATTGAATCC | + |
|
Preference number: 3 (lower is better) Translates to: HCPHGHICTRSA*CLWRPEEVIES Trigger: GGATTCAATAACTTCTTCTGGCCTCCATAGGCATCAGGCACTTCTGGTACATATATGTCCATGTGGGCAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR CCA 72 bp | TCACAGGTGACAGCTTTAGTGACTGCTAGGCAACATTaGGTGATGTTGCCTTTTCTATCAGTATGGGTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: SQVTALVTARQH*VMLPFLSVWVP Trigger: AGGAACCCATACTGATAGAAAAGGCAACATCACCCAATGTTGCCTAGCAGTCACTAAAGCTGTCACCTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGGGCTCTGTTTGTACTCAATCAAAATCTCTTCTCACATCTATCATTGCCTCATAGTGGTTGTCACTaGGAACAAGCAGTCTCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: TGALFVLNQNLFSHLSLPHSGCH*EQAVSP Trigger: TGGGGAGACTGCTTGTTCCAAGTGACAACCACTATG...AGGCAATGATAGATGTGAGAAGAGATTTTGATTGAGTACAAACAGAGCCCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR TCA 72 bp | TGGAACAAGCAGTCTCCCCACAGAGGTTTTTGTACCTaGCATTTCCTCAATTTGGAATGTTTGCTGCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: WNKQSPHRGFCT*HFLNLECLLLL Trigger: CAGAAGCAGCAAACATTCCAAATTGAGGAAATGTCAGGTACAAAAACCTCTGTGGGGAGACTGCTTGTTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR GCA 72 bp | TCTTTGTTTACCAATTCCATTTGTCACACACCTCTTTaGTGTGCTGCAGGCCACCCCAGAGAAATTAAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: SLFTNSICHTPL*CAAGHPREIKG Trigger: ACCTTTAATTTCTCTGGGGTGGCCTGCAGCACAGCAAAGAGGTGTGTGACAAATGGAATTGGTAAACAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR TCA 72 bp | TTCTATTGCATAGAATGTTGTGCCCGAGAGATTCAGTaGTTGAAGAAAAGGCAGCTGAGCAAGAGTCAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: FYCIECCAREIQ*LKKRQLSKSQG Trigger: ACCTTGACTCTTGCTCAGCTGCCTTTTCTTCAATCACTGAATCTCTCGGGCACAACATTCTATGCAATAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR TCA 72 bp | CTGAGATTTCAGAAAACATGCCATCTTCCTGATACCTaGAGCTTGTCCAGGTGTTGTTCATTGAATGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LRFQKTCHLPDT*SLSRCCSLNVW Trigger: CCAGACATTCAATGAACAACACCTGGACAAGCTTCAGGTATCAGGAAGATGGCATGTTTTCTGAAATCTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR GCA 72 bp | GACAATATGGGCATAGGTACTCACAGACATATAAAGTaGAGAGTGAATAGCCCACGAACTGCAACAAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: DNMGIGTHRHIK*RVNSPRTATKR Trigger: CCTTTTTGTTGCAGTTCGTGGGCTATTCACTCTGCACTTTATATGTCTGTGAGTACCTATGCCCATATTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGAGAAGAAAGCAGAAAATCTCAGAGGGAGATGCAACCAGGAAAGATTGTTTTTGCTTACCCCATTTaGGCTTCTTCACACTGTATG | + |
|
Preference number: 3 (lower is better) Translates to: QREESRKSQREMQPGKIVFAYPI*ASSHCM Trigger: CATACAGTGTGAAGAAGCCAAAATGGGGTAAGCAAA...AACAATCTTTCCTGGTTGCATCTCCCTCTGAGATTTTCTGCTTTCTTCTCTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR TCA 72 bp | CCTGCACTTGAGAATTCATTTAGGCAAACATCGAAATaGGCAATGTACATGAGAGTGGTCCAGAAATCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: PALENSFRQTSK*AMYMRVVQKSG Trigger: ACCAGATTTCTGGACCACTCTCATGTACATTGCTCATTTCGATGTTTGCCTAAATGAATTCTCAAGTGCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR GCA 72 bp | TCCAGGTGTTGTTCATTGAATGTCTGGATTACATTGTaGATTGAATGTCTAGACCACCGAACTGCAATGCAA | + |
|
Preference number: 3 (lower is better) Translates to: SRCCSLNVWITL*IECLDHRTAMQ Trigger: TTGCATTGCAGTTCGGTGGTCTAGACATTCAATGCACAATGTAATCCAGACATTCAATGAACAACACCTGGA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR GCA 72 bp | GACAGAGAGAAGAAAGCAGAAAATCTCAGAGGGAGATaGAACCAGGAAAGATTGTTGTCTTTGATGATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: DREKKAENLRGR*NQERLLSLMMK Trigger: CTTCATCATCAAAGACAACAATCTTTCCTGGTTGCATCTCCCTCTGAGATTTTCTGCTTTCTTCTCTCTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR-3UTR CAA 90 bp | AGGGGCTCTGTTTGTACTCAATCAAAATCTCTTCTCACATCTATCATTGCCTATTTCAGGGAGTTAGGTTaGGGGAAAGAAAGCATGGTA | + |
|
Preference number: 3 (lower is better) Translates to: RGSVCTQSKSLLTSIIAYFRELG*GKESMV Trigger: TACCATGCTTTCTTTCCCCAAACCTAACTCCCTGAA...ATAGGCAATGATAGATGTGAGAAGAGATTTTGATTGAGTACAAACAGAGCCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGAGAAGAAAGCAGAAAATCTCAGAGGGAGATGCAACCAGGAAAGATTGTTTCCAGGTGTTGTTCATaGAATGTCTGGATTACATTG | + |
|
Preference number: 3 (lower is better) Translates to: QREESRKSQREMQPGKIVSRCCS*NVWITL Trigger: CAATGTAATCCAGACATTCAATGAACAACACCTGGA...AACAATCTTTCCTGGTTGCATCTCCCTCTGAGATTTTCTGCTTTCTTCTCTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR-3UTR CAA 90 bp | AGGGGCTCTGTTTGTACTCAATCAAAATCTCTTCTCACATCTATCATTGCCTATTGGAACAATAGCGTGTaGGTGATCTGCTTTGAAATC | + |
|
Preference number: 3 (lower is better) Translates to: RGSVCTQSKSLLTSIIAYWNNSV*VICFEI Trigger: GATTTCAAAGCAGATCACCAACACGCTATTGTTCCA...ATAGGCAATGATAGATGTGAGAAGAGATTTTGATTGAGTACAAACAGAGCCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR GCA 72 bp | CATGAGAGTGGTCCAGAAATCTGGTCTTGTTTAGATTaGTGGTTAATTGAAAAGCAGGAAGAACAGAATGAG | + |
|
Preference number: 3 (lower is better) Translates to: HESGPEIWSCLD*WLIEKQEEQNE Trigger: CTCATTCTGTTCTTCCTGCTTTTCAATTAACCAGCAATCTAAACAAGACCAGATTTCTGGACCACTCTCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGGGCTCTGTTTGTACTCAATCAAAATCTCTTCTCACATCTATCATTGCCTTCCAGAAATCTGGTCTaGTTTAGATTGCTGGTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: TGALFVLNQNLFSHLSLPSRNLV*FRLLVN Trigger: ATTAACCAGCAATCTAAACAAGACCAGATTTCTGGA...AGGCAATGATAGATGTGAGAAGAGATTTTGATTGAGTACAAACAGAGCCCCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR CCA 72 bp | TTTATTTCTTTTTATGTGAATGGGTCATTGCCCACATaGACATATATGTACCAGAAGTGCCTGATGCCTATG | + |
|
Preference number: 3 (lower is better) Translates to: FISFYVNGSLPT*TYMYQKCLMPM Trigger: CATAGGCATCAGGCACTTCTGGTACATATATGTCCATGTGGGCAATGACCCATTCACATAAAAAGAAATAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR TCA 72 bp | ATTCATTTAGGCAAACATCGAAATGAGCAATGTACATaGGAGTGGTCCAGAAATCTGGTCTTGTTTAGATTG | + |
|
Preference number: 3 (lower is better) Translates to: IHLGKHRNEQCT*EWSRNLVLFRL Trigger: CAATCTAAACAAGACCAGATTTCTGGACCACTCTCATGTACATTGCTCATTTCGATGTTTGCCTAAATGAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR GCA 72 bp | TGGAGTCACAGTGTATGTCTGATTTCCAGTATGTCATaGTCCTTTGTAAATACAGATTCTTATATAGTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: WSHSVCLISSMS*SFVNTDSYIVQ Trigger: CTGGACTATATAAGAATCTGTATTTACAAAGGAGCATGACATACTGGAAATCAGACATACACTGTGACTCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR-3UTR CAA 90 bp | TGGTCTTGTTTAGATTGCTGGTTAATTGAAAAGCAGGAAGAACAGAATGAGATAGTCACAGCATTTACTTaGATTGTTAGATGTAGGACC | + |
|
Preference number: 3 (lower is better) Translates to: WSCLDCWLIEKQEEQNEIVTAFT*IVRCRT Trigger: GGTCCTACATCTAACAATCAAAGTAAATGCTGTGAC...TATCTCATTCTGTTCTTCCTGCTTTTCAATTAACCAGCAATCTAAACAAGACCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR TCA 72 bp | CAATGTGGAAGATGTTACCAGTCACAGCATTTACTTTaGTTGTTAGATGTAGGACCAGAAGAAAATGTTATA | + |
|
Preference number: 3 (lower is better) Translates to: QCGRCYQSQHLL*LLDVGPEENVI Trigger: TATAACATTTTCTTCTGGTCCTACATCTAACAATCAAAGTAAATGCTGTGACTGGTAACATCTTCCACATTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR TCA 72 bp | TATTTTCTCCCAGTTCTTGGAACAATAGCGTGTTGGTaGTCTGCTTTGAAATCCAATCTTGTGATTTTTATT | + |
|
Preference number: 3 (lower is better) Translates to: YFLPVLGTIACW*SALKSNLVIFI Trigger: AATAAAAATCACAAGATTGGATTTCAAAGCAGATCACCAACACGCTATTGTTCCAAGAACTGGGAGAAAATA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR GCA 72 bp | TCTCCCAGTTCTTGGAACAATAGCGTGTTGGTGATCTaGTTTGAAATCCAATCTTGTGATTTTTATTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: SPSSWNNSVLVI*FEIQSCDFYLF Trigger: AAATAAATAAAAATCACAAGATTGGATTTCAAAGCAGATCACCAACACGCTATTGTTCCAAGAACTGGGAGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| CDS-3UTR CCA 90 bp | TGTCACTTGGAACAAGCAGTCTCCCCACAGAGGTTTTTGTACCTGACATTTCCTTGTCCTCAGGAAGGCTaGTGGATGGGCGTGAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: CHLEQAVSPQRFLYLTFPCPQEG*WMGVSR Trigger: TCTACTCACGCCCATCCACCAGCCTTCCTGAGGACA...AGGAAATGTCAGGTACAAAAACCTCTGTGGGGAGACTGCTTGTTCCAAGTGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| CDS-3UTR TCA 90 bp | TGTCACTTGGAACAAGCAGTCTCCCCACAGAGGTTTTTGTACCTGACATTTCCTCAGCTTGATGGTGAGTaGGGTGAGAGATATGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: CHLEQAVSPQRFLYLTFPQLDGE*GERYGM Trigger: CATTCCATATCTCTCACCTCACTCACCATCAAGCTG...AGGAAATGTCAGGTACAAAAACCTCTGTGGGGAGACTGCTTGTTCCAAGTGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| CDS-3UTR TCA 90 bp | TGTCACTTGGAACAAGCAGTCTCCCCACAGAGGTTTTTGTACCTGACATTTCCTGATGAGCTTTTCTTCTaGGAAGGTGTCACTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: CHLEQAVSPQRFLYLTFPDELFF*EGVTQH Trigger: ATGCTGAGTGACACCTTCTCAGAAGAAAAGCTCATC...AGGAAATGTCAGGTACAAAAACCTCTGTGGGGAGACTGCTTGTTCCAAGTGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| CDS-3UTR TCA 90 bp | ACAGGGGCTCTGTTTGTACTCAATCAAAATCTCTTCTCACATCTATCATTGCCTGCTGGTGGATGGGCGTaGGTAGATGAAGATACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TGALFVLNQNLFSHLSLPAGGWA*VDEDTV Trigger: CACTGTATCTTCATCTACTCACGCCCATCCACCAGC...AGGCAATGATAGATGTGAGAAGAGATTTTGATTGAGTACAAACAGAGCCCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR CAA 72 bp | GCAGAAAATCTCAGAGGGAGATGCAACCAGGAAAGATaGTTGTCTTTGATGATGAAGGGACCAACATCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AENLRGRCNQER*LSLMMKGPTSL Trigger: CAGGGATGTTGGTCCCTTCATCATCAAAGACAACAATCTTTCCTGGTTGCATCTCCCTCTGAGATTTTCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| CDS-3UTR TCA 90 bp | GGACCCAGACAATATGGGCATAGGTACTCACAGACATATAAAGTGCAGAGTGAAAGGCATCAAAGGAGATaGGCTTTTCTTCTGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GPRQYGHRYSQTYKVQSERHQRR*AFLLRR Trigger: CCTTCTCAGAAGAAAAGCTCATCTCCTTTGATGCCT...TTCACTCTGCACTTTATATGTCTGTGAGTACCTATGCCCATATTGTCTGGGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| CDS-3UTR GCA 90 bp | ACAGGGGCTCTGTTTGTACTCAATCAAAATCTCTTCTCACATCTATCATTGCCTGAAGGAAGATCTCTGTaGAGGCAAAGAGGTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TGALFVLNQNLFSHLSLPEGRSL*RQRGAG Trigger: TCCTGCACCTCTTTGCCTGCACAGAGATCTTCCTTC...AGGCAATGATAGATGTGAGAAGAGATTTTGATTGAGTACAAACAGAGCCCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR CAA 72 bp | TTCAGCACAGCCAAAGCTACACAGATAAACCCTATCTaGAACAACCAAAACCAACCAACCAACCAACCAACC | + |
|
Preference number: 4 (lower is better) Translates to: FSTAKATQINPI*NNQNQPTNQPT Trigger: GGTTGGTTGGTTGGTTGGTTGGTTTTGGTTGTTCAAGATAGGGTTTATCTGTGTAGCTTTGGCTGTGCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR CAA 72 bp | GAAGTGCCTGATGCCTATGGAGGCCAGAAGAAGTTATaGAATCCCTTTGAACTGGAGTTACAGATAGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: EVPDAYGGQKKL*NPFELELQIVV Trigger: CACAACTATCTGTAACTCCAGTTCAAAGGGATTCAATAACTTCTTCTGGCCTCCATAGGCATCAGGCACTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR CAA 72 bp | TGTCACTTGGAACAAGCAGTCTCCCCACAGAGGTTTTaGTACCTGACATTTCCTCAATTTGGAATGTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CHLEQAVSPQRF*YLTFPQFGMFA Trigger: AGCAAACATTCCAAATTGAGGAAATGTCAGGTACAAAAACCTCTGTGGGGAGACTGCTTGTTCCAAGTGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR CAA 72 bp | GGTTCCTCTGCTGATTGCTGCATACAGGGGCTCTGTTaGTACTCAATCAAAATCTCTTCTCACATCTATCAT | + |
|
Preference number: 4 (lower is better) Translates to: GSSADCCIQGLC*YSIKISSHIYH Trigger: ATGATAGATGTGAGAAGAGATTTTGATTGAGTACAAACAGAGCCCCTGTATGCAGCAATCAGCAGAGGAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR CAA 72 bp | TTGTCCAGGTGTTGTTCATTGAATGTCTGGATTACATaGTGCATTGAATGTCTAGACCACCGAACTGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: LSRCCSLNVWIT*CIECLDHRTAM Trigger: CATTGCAGTTCGGTGGTCTAGACATTCAATGCACAATGTAATCCAGACATTCAATGAACAACACCTGGACAA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| CDS-3UTR TCA 90 bp | AAAATTCACACAATTGCAAACAGTAGTGACAATTCACAGGTGACAGCTTTAGTGCAGTGCAAGCCAGTTTaGTCACTTGAGGTACATCAC | + |
|
Preference number: 4 (lower is better) Translates to: KIHTIANSSDNSQVTALVQCKPV*SLEVHH Trigger: GTGATGTACCTCAAGTGATCAAACTGGCTTGCACTG...CACTAAAGCTGTCACCTGTGAATTGTCACTACTGTTTGCAATTGTGTGAATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| CDS-3UTR CCA 90 bp | AAAATTCACACAATTGCAAACAGTAGTGACAATTCACAGGTGACAGCTTTAGTGGTCACTCAGCATCTTTaGGACAGTGACAGTGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: KIHTIANSSDNSQVTALVVTQHL*DSDSGM Trigger: CATTCCACTGTCACTGTCCCAAAGATGCTGAGTGAC...CACTAAAGCTGTCACCTGTGAATTGTCACTACTGTTTGCAATTGTGTGAATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| CDS-3UTR TCA 90 bp | TGGTCTTGTTTAGATTGCTGGTTAATTGAAAAGCAGGAAGAACAGAATGAGATAATGGGCGTGAGTAGATaGAGATACAGTGTCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: WSCLDCWLIEKQEEQNEIMGVSR*RYSVPE Trigger: TTCTGGGACACTGTATCTTCATCTACTCACGCCCAT...TATCTCATTCTGTTCTTCCTGCTTTTCAATTAACCAGCAATCTAAACAAGACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| CDS-3UTR GCA 90 bp | AGGGGCTCTGTTTGTACTCAATCAAAATCTCTTCTCACATCTATCATTGCCTATACTCACAAGGATGACTaGATAGGACACTACAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RGSVCTQSKSLLTSIIAYTHKDD*IGHYKN Trigger: GTTCTTGTAGTGTCCTATGCAGTCATCCTTGTGAGT...ATAGGCAATGATAGATGTGAGAAGAGATTTTGATTGAGTACAAACAGAGCCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR CAA 72 bp | CAGGCAAAAGGACCATTAAAAGTAGAGATGGTTATTTaGGCCCAGGGATTTATTGATGGTATCCTCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QAKGPLKVEMVI*AQGFIDGILTD Trigger: ATCAGTGAGGATACCATCAATAAATCCCTGGGCCAAAATAACCATCTCTACTTTTAATGGTCCTTTTGCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR CAA 72 bp | TTGGTATTTTCTCCCAGTTCTTGGAACAATAGCGTGTaGGTGATCTGCTTTGAAATCCAATCTTGTGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: LVFSPSSWNNSV*VICFEIQSCDF Trigger: AAAATCACAAGATTGGATTTCAAAGCAGATCACCAACACGCTATTGTTCCAAGAACTGGGAGAAAATACCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| 3UTR CAA 72 bp | ATTTTTAGAAATGAAACTCAAATGTATTCTGGAGAATaGGACCCAGACAATATGGGCATAGGTACTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: IFRNETQMYSGE*DPDNMGIGTHR Trigger: TCTGTGAGTACCTATGCCCATATTGTCTGGGTCCAATTCTCCAGAATACATTTGAGTTTCATTTCTAAAAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| CDS-3UTR CAA 90 bp | ATTTCTTCAGTGCCCTTCTGCTGCCAGCCTGCCCTGCTATCTAGGCTGTCCCCAGCCGTCAGAGATCTGTaGCCTCAGACTCACAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: ISSVPFCCQPALLSRLSPAVRDL*PQTHKD Trigger: ATCCTTGTGAGTCTGAGGCAACAGATCTCTGACGGC...TGGGGACAGCCTAGATAGCAGGGCAGGCTGGCAGCAGAAGGGCACTGAAGAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| CDS TCA 90 bp | CTTTCCTCTTGCCGTCAGAGATCTGTTGCCTCAGACTCACAAGGATaGCTGCATAGGACACTACAAGAACCACAAAACATACCACAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LSSCRQRSVASDSQG*LHRTLQEPQNIPQR Trigger: TCTCTGTGGTATGTTTTGTGGTTCTTGTAGTGTCCTATGCAGTCATCCTTGTGAGTCTGAGGCAACAGATCTCTGACGGCAAGAGGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| CDS-3UTR CAA 90 bp | AAAATTCACACAATTGCAAACAGTAGTGACAATTCACAGGTGACAGCTTTAGTGCCTTCCAGTTCATTATaGTCATATACTGCAAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: KIHTIANSSDNSQVTALVPSSSL*SYTAKV Trigger: AACCTTTGCAGTATATGACAATAATGAACTGGAAGG...CACTAAAGCTGTCACCTGTGAATTGTCACTACTGTTTGCAATTGTGTGAATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| CDS TCA 72 bp | CACAACCTTGTCCTCAGGAAGGCTGGTGGATGGGCGTaGGTAGATGAAGATACAGTGTCCCAGAAACAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: HNLVLRKAGGWA*VDEDTVSQKQS Trigger: ACTCTGTTTCTGGGACACTGTATCTTCATCTACTCACGCCCATCCACCAGCCTTCCTGAGGACAAGGTTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| CDS TCA 72 bp | TGCCGTCAGAGATCTGTTGCCTCAGACTCACAAGGATaGCTGCATAGGACACTACAAGAACCACAAAACATA | + |
|
Preference number: 6 (lower is better) Translates to: CRQRSVASDSQG*LHRTLQEPQNI Trigger: TATGTTTTGTGGTTCTTGTAGTGTCCTATGCAGTCATCCTTGTGAGTCTGAGGCAACAGATCTCTGACGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||
| CDS GCA 72 bp | GTCAGAGATCTGTTGCCTCAGACTCACAAGGATGACTaGATAGGACACTACAAGAACCACAAAACATACCAC | + |
|
Preference number: 6 (lower is better) Translates to: VRDLLPQTHKDD*IGHYKNHKTYH Trigger: GTGGTATGTTTTGTGGTTCTTGTAGTGTCCTATGCAGTCATCCTTGTGAGTCTGAGGCAACAGATCTCTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206520.3 |
||