Pregenerated sensors for OLFR1507 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059887Ensembl transcript IDs: ENSMUST00000073571.6, ENSMUST00000206062.4
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGTAGGGAATGCAACCTGGGCCTCTTATATGCCAAGTACATATTCTaGACTGAGCTACATTCTGGGCCACTGAGTCCTATCTTTATGATC | + |
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Preference number: 1 (lower is better) Translates to: SRECNLGLLYAKYIF*TELHSGPLSPIFMI Trigger: GATCATAAAGATAGGACTCAGTGGCCCAGAATGTAGCTCAGTGCAGAATATGTACTTGGCATATAAGAGGCCCAGGTTGCATTCCCTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206062.4 |
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| 3UTR TCA 90 bp | ATGAGAAATATGTCTCCCTTTCATTACTCCGATGGCAGATTTGGATaGACTCTCAAGAGGATTAGTGACTTTAGTGGTTCAGAACCTTTC | + |
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Preference number: 1 (lower is better) Translates to: MRNMSPFHYSDGRFG*TLKRISDFSGSEPF Trigger: GAAAGGTTCTGAACCACTAAAGTCACTAATCCTCTTGAGAGTTCATCCAAATCTGCCATCGGAGTAATGAAAGGGAGACATATTTCTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206062.4 |
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| 3UTR GCA 90 bp | TTCTTTGTACTCTACTGCACACTCCATGTAGGACTGTCTATTTGTTaGATTTGTAACTACAAATCTAGTGTCCAGCACAAATTTGATGCT | + |
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Preference number: 1 (lower is better) Translates to: FFVLYCTLHVGLSIC*ICNYKSSVQHKFDA Trigger: AGCATCAAATTTGTGCTGGACACTAGATTTGTAGTTACAAATGCAACAAATAGACAGTCCTACATGGAGTGTGCAGTAGAGTACAAAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206062.4 |
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| 3UTR-3UTR GCA 90 bp | CCTTTCCTGCCAGCCTGCCCTCCTATCTGGGCTAAAAACCACAGTGGTTGCTACCCTGGGCCTCTTATATaGCAAGTACATATTCTGCAC | + |
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Preference number: 2 (lower is better) Translates to: PFLPACPPIWAKNHSGCYPGPLI*QVHILH Trigger: GTGCAGAATATGTACTTGGCATATAAGAGGCCCAGG...GTAGCAACCACTGTGGTTTTTAGCCCAGATAGGAGGGCAGGCTGGCAGGAAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206062.4 |
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| 3UTR-3UTR CCA 90 bp | GTGGTTGCTACTTCTGAGAACAAGTCATCTCTCCTAAGAGAGGTTTTGCACCTGTCAAGGAGGTTTCTCTaGACTGCTCAGTGTAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: VVATSENKSSLLREVLHLSRRFL*TAQCSV Trigger: GACACTACACTGAGCAGTCCAGAGAAACCTCCTTGA...CAGGTGCAAAACCTCTCTTAGGAGAGATGACTTGTTCTCAGAAGTAGCAACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206062.4 |
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| 3UTR-3UTR CCA 90 bp | AAAACCACAGTGGTTGCTACTTCTGAGAACAAGTCATCTCTCCTAAGAGAGGTTACACCTCAGCTAAAATaGGACTTCCTCAAGGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: KTTVVATSENKSSLLREVTPQLK*DFLKEV Trigger: AACCTCCTTGAGGAAGTCCCATTTTAGCTGAGGTGT...AACCTCTCTTAGGAGAGATGACTTGTTCTCAGAAGTAGCAACCACTGTGGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206062.4 |
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| 3UTR-3UTR TCA 90 bp | TCTGGGCTAAAAACCACAGTGGTTGCTACTTCTGAGAACAAGTCATCTCTCCTATGTCCAGCACAAATTTaGTGCTCAGGAAGTATTTGT | + |
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Preference number: 2 (lower is better) Translates to: SGLKTTVVATSENKSSLLCPAQI*CSGSIC Trigger: ACAAATACTTCCTGAGCATCAAATTTGTGCTGGACA...TAGGAGAGATGACTTGTTCTCAGAAGTAGCAACCACTGTGGTTTTTAGCCCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206062.4 |
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| 3UTR CAA 90 bp | TTGATGGATTTGATTGAAATCCAAACCCAATTTTGTGACTCTTTTTaGTGCCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: LMDLIEIQTQFCDSF*CQRERERERERERE Trigger: CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGCACAAAAAAGAGTCACAAAATTGGGTTTGGATTTCAATCAAATCCATCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206062.4 |
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| 3UTR-3UTR TCA 90 bp | CATGTAGGACTGTCTATTTGTTGCATTTGTAACTACAAATCTAGTGTCCAGCACCAGCTCTTGGAGCAATaGTGGGTTGATGGATTTGAT | + |
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Preference number: 2 (lower is better) Translates to: HVGLSICCICNYKSSVQHQLLEQ*WVDGFD Trigger: ATCAAATCCATCAACCCATCATTGCTCCAAGAGCTG...GTGCTGGACACTAGATTTGTAGTTACAAATGCAACAAATAGACAGTCCTACATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206062.4 |
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| 3UTR CAA 90 bp | GAATTCGGGTTGGTATTTTCTCCCAGCTCTTGGAGCAATGATGGGTaGATGGATTTGATTGAAATCCAAACCCAATTTTGTGACTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: EFGLVFSPSSWSNDG*MDLIEIQTQFCDSF Trigger: AAAAGAGTCACAAAATTGGGTTTGGATTTCAATCAAATCCATCAACCCATCATTGCTCCAAGAGCTGGGAGAAAATACCAACCCGAATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206062.4 |
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| 3UTR-3UTR CCA 90 bp | AAAACCACAGTGGTTGCTACTTCTGAGAACAAGTCATCTCTCCTAAGAGAGGTTATAATGAATTCGGGTTaGTATTTTCTCCCAGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: KTTVVATSENKSSLLREVIMNSG*YFLPAL Trigger: AAGAGCTGGGAGAAAATACCAACCCGAATTCATTAT...AACCTCTCTTAGGAGAGATGACTTGTTCTCAGAAGTAGCAACCACTGTGGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206062.4 |
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| 3UTR-3UTR TCA 90 bp | ATTTGTTGCATTTGTAACTACAAATCTAGTGTCCAGCACAAATTTGATGCTCAGGTGTTTGAAGTAGTTTaGAGTAGGGAATGCAACCTG | + |
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Preference number: 2 (lower is better) Translates to: ICCICNYKSSVQHKFDAQVFEVV*SRECNL Trigger: CAGGTTGCATTCCCTACTTCAAACTACTTCAAACAC...CTGAGCATCAAATTTGTGCTGGACACTAGATTTGTAGTTACAAATGCAACAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206062.4 |
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| 3UTR CAA 90 bp | GAACTCTCAAGAGGATTAGTGACTTTAGTGGTTCAGAACCTTTCTTaGTCAGTAGTTAAACTCAAATGTCCTTTGATTCATTTACTCACT | + |
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Preference number: 2 (lower is better) Translates to: ELSRGLVTLVVQNLS*SVVKLKCPLIHLLT Trigger: AGTGAGTAAATGAATCAAAGGACATTTGAGTTTAACTACTGACAAAGAAAGGTTCTGAACCACTAAAGTCACTAATCCTCTTGAGAGTTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206062.4 |
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| 3UTR GCA 72 bp | TTTCTCTGGACTGCTCAGTGTAGTGTCCACCTCCCCTaGATGGTCATGGTGCTCACTCTATTCCCCAACAGG | + |
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Preference number: 3 (lower is better) Translates to: FLWTAQCSVHLP*MVMVLTLFPNR Trigger: CCTGTTGGGGAATAGAGTGAGCACCATGACCATGCAGGGGAGGTGGACACTACACTGAGCAGTCCAGAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206062.4 |
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| 3UTR CCA 72 bp | TCTGGACTGCTCAGTGTAGTGTCCACCTCCCCTGCATaGTCATGGTGCTCACTCTATTCCCCAACAGGATTT | + |
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Preference number: 3 (lower is better) Translates to: SGLLSVVSTSPA*SWCSLYSPTGF Trigger: AAATCCTGTTGGGGAATAGAGTGAGCACCATGACCATGCAGGGGAGGTGGACACTACACTGAGCAGTCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206062.4 |
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| 3UTR-3UTR CAA 90 bp | CCTTTCCTGCCAGCCTGCCCTCCTATCTGGGCTAAAAACCACAGTGGTTGCTACTTTTGTGACTCTTTTTaGTGCCAGAGAGAGAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: PFLPACPPIWAKNHSGCYFCDSF*CQRERE Trigger: CTCTCTCTCTCTCTGGCACAAAAAAGAGTCACAAAA...GTAGCAACCACTGTGGTTTTTAGCCCAGATAGGAGGGCAGGCTGGCAGGAAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000206062.4 |
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| 3UTR GCA 72 bp | TGCAACCTGGGCCTCTTATATGCCAAGTACATATTCTaGACTGAGCTACATTCTGGGCCACTGAGTCCTATC | + |
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Preference number: 3 (lower is better) Translates to: CNLGLLYAKYIF*TELHSGPLSPI Trigger: GATAGGACTCAGTGGCCCAGAATGTAGCTCAGTGCAGAATATGTACTTGGCATATAAGAGGCCCAGGTTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206062.4 |
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| 3UTR TCA 72 bp | CCTGGGCCTCTTATATGCCAAGTACATATTCTGCACTaGGCTACATTCTGGGCCACTGAGTCCTATCTTTAT | + |
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Preference number: 3 (lower is better) Translates to: PGPLICQVHILH*ATFWATESYLY Trigger: ATAAAGATAGGACTCAGTGGCCCAGAATGTAGCTCAGTGCAGAATATGTACTTGGCATATAAGAGGCCCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206062.4 |
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| 3UTR-3UTR CAA 90 bp | TCTGGGCTAAAAACCACAGTGGTTGCTACTTCTGAGAACAAGTCATCTCTCCTAGATGGGTTGATGGATTaGATTGAAATCCAAACCCAA | + |
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Preference number: 3 (lower is better) Translates to: SGLKTTVVATSENKSSLLDGLMD*IEIQTQ Trigger: TTGGGTTTGGATTTCAATCAAATCCATCAACCCATC...TAGGAGAGATGACTTGTTCTCAGAAGTAGCAACCACTGTGGTTTTTAGCCCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206062.4 |
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| 3UTR-3UTR CAA 90 bp | AAAACCACAGTGGTTGCTACTTCTGAGAACAAGTCATCTCTCCTAAGAGAGGTTTGGAGCAATGATGGGTaGATGGATTTGATTGAAATC | + |
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Preference number: 3 (lower is better) Translates to: KTTVVATSENKSSLLREVWSNDG*MDLIEI Trigger: GATTTCAATCAAATCCATCAACCCATCATTGCTCCA...AACCTCTCTTAGGAGAGATGACTTGTTCTCAGAAGTAGCAACCACTGTGGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206062.4 |
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| 3UTR CCA 72 bp | GATAATGAATTCGGGTTGGTATTTTCTCCCAGCTCTTaGAGCAATGATGGGTTGATGGATTTGATTGAAATC | + |
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Preference number: 3 (lower is better) Translates to: DNEFGLVFSPSS*SNDGLMDLIEI Trigger: GATTTCAATCAAATCCATCAACCCATCATTGCTCCAAGAGCTGGGAGAAAATACCAACCCGAATTCATTATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206062.4 |
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| CDS-3UTR CCA 90 bp | CCTTTCCTGCCAGCCTGCCCTCCTATCTGGGCTAAAAACCACAGTGGTTGCTACAAATACATGGGAGTATaGAGTCGGTGGTCGTGTATG | + |
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Preference number: 4 (lower is better) Translates to: PFLPACPPIWAKNHSGCYKYMGV*SRWSCM Trigger: CATACACGACCACCGACTCCATACTCCCATGTATTT...GTAGCAACCACTGTGGTTTTTAGCCCAGATAGGAGGGCAGGCTGGCAGGAAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206062.4 |
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| CDS-3UTR TCA 90 bp | CTGGGCCTCTTATATGCCAAGTACATATTCTGCACTGAGCTACATTCTGGGCCACTGGGCGTGAGTAGATaGAGATACAGTGTCCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: LGLLYAKYIFCTELHSGPLGVSR*RYSVPE Trigger: TTCTGGGACACTGTATCTTCATCTACTCACGCCCAG...TGGCCCAGAATGTAGCTCAGTGCAGAATATGTACTTGGCATATAAGAGGCCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206062.4 |
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| CDS-3UTR CCA 90 bp | CCTTTCCTGCCAGCCTGCCCTCCTATCTGGGCTAAAAACCACAGTGGTTGCTACTGCAGGAAAAATATCTaGACCACACAGTCATCAAAG | + |
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Preference number: 4 (lower is better) Translates to: PFLPACPPIWAKNHSGCYCRKNI*TTQSSK Trigger: CTTTGATGACTGTGTGGTCCAGATATTTTTCCTGCA...GTAGCAACCACTGTGGTTTTTAGCCCAGATAGGAGGGCAGGCTGGCAGGAAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000206062.4 |
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| CDS-3UTR CCA 90 bp | CTGGGCCTCTTATATGCCAAGTACATATTCTGCACTGAGCTACATTCTGGGCCAAGATCATCCCACTGTTaGAGACAACGAGAATCTCAG | + |
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Preference number: 4 (lower is better) Translates to: LGLLYAKYIFCTELHSGPRSSHC*RQRESQ Trigger: CTGAGATTCTCGTTGTCTCCAACAGTGGGATGATCT...TGGCCCAGAATGTAGCTCAGTGCAGAATATGTACTTGGCATATAAGAGGCCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206062.4 |
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| CDS-3UTR GCA 90 bp | TCTGGGCTAAAAACCACAGTGGTTGCTACTTCTGAGAACAAGTCATCTCTCCTATATGGCCGTGAAAAATaGAGATACAATCTTGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: SGLKTTVVATSENKSSLLYGREK*RYNLVL Trigger: GAGGACAAGATTGTATCTGCATTTTTCACGGCCATA...TAGGAGAGATGACTTGTTCTCAGAAGTAGCAACCACTGTGGTTTTTAGCCCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000206062.4 |
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| CDS-3UTR CCA 90 bp | ATTTGTTGCATTTGTAACTACAAATCTAGTGTCCAGCACAAATTTGATGCTCAGTACAATCTTGTCCTCTaGAAGGCTGATGGCTGGGCG | + |
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Preference number: 4 (lower is better) Translates to: ICCICNYKSSVQHKFDAQYNLVL*KADGWA Trigger: CGCCCAGCCATCAGCCTTCCAGAGGACAAGATTGTA...CTGAGCATCAAATTTGTGCTGGACACTAGATTTGTAGTTACAAATGCAACAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206062.4 |
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| CDS-3UTR TCA 90 bp | GTCATCTATGCAAATGTCAGAATGAATAATGTAAGTGAGGTGACAACTGAAAAGGCATCTTTGGGACAGTaGCAGTGGAATGGCAGACAT | + |
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Preference number: 4 (lower is better) Translates to: VIYANVRMNNVSEVTTEKASLGQ*QWNGRH Trigger: ATGTCTGCCATTCCACTGTCACTGTCCCAAAGATGC...CTTTTCAGTTGTCACCTCACTTACATTATTCATTCTGACATTTGCATAGATGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206062.4 |
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| CDS-3UTR TCA 90 bp | AGCAATGATGGGTTGATGGATTTGATTGAAATCCAAACCCAATTTTGTGACTCTCAGCTTGATGGTGAGTaGGGTGAAAGATATGGAGTG | + |
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Preference number: 4 (lower is better) Translates to: SNDGLMDLIEIQTQFCDSQLDGE*GERYGV Trigger: CACTCCATATCTTTCACCTCACTCACCATCAAGCTG...AGAGTCACAAAATTGGGTTTGGATTTCAATCAAATCCATCAACCCATCATTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206062.4 |
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| CDS-3UTR CCA 90 bp | GCATTTGTAACTACAAATCTAGTGTCCAGCACAAATTTGATGCTCAGGAAGTATAAGATATGGAGTGTATaGTCCCTGCTGTCCACATGG | + |
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Preference number: 4 (lower is better) Translates to: AFVTTNLVSSTNLMLRKYKIWSV*SLLSTW Trigger: CCATGTGGACAGCAGGGACCATACACTCCATATCTT...ATACTTCCTGAGCATCAAATTTGTGCTGGACACTAGATTTGTAGTTACAAATGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206062.4 |
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| CDS-3UTR TCA 90 bp | AGCAATGATGGGTTGATGGATTTGATTGAAATCCAAACCCAATTTTGTGACTCTTCCCCTCTTTTCTCCTaGTTAACTTCTTCAAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: SNDGLMDLIEIQTQFCDSSPLFS*LTSSRH Trigger: GTGCCTTGAAGAAGTTAATCAGGAGAAAAGAGGGGA...AGAGTCACAAAATTGGGTTTGGATTTCAATCAAATCCATCAACCCATCATTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000206062.4 |
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| 3UTR CAA 72 bp | TTGGTATTTTCTCCCAGCTCTTGGAGCAATGATGGGTaGATGGATTTGATTGAAATCCAAACCCAATTTTGT | + |
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Preference number: 4 (lower is better) Translates to: LVFSPSSWSNDG*MDLIEIQTQFC Trigger: ACAAAATTGGGTTTGGATTTCAATCAAATCCATCAACCCATCATTGCTCCAAGAGCTGGGAGAAAATACCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206062.4 |
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| CDS-3UTR GCA 90 bp | TGCTCAGGAAGTATTTGTGAAATGAGAAATATGTCTCCCTTTCATTACTCCGATACTCACAAGGATGACTaGATAGGACACTACAATAAT | + |
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Preference number: 4 (lower is better) Translates to: CSGSICEMRNMSPFHYSDTHKDD*IGHYNN Trigger: ATTATTGTAGTGTCCTATGCAGTCATCCTTGTGAGT...ATCGGAGTAATGAAAGGGAGACATATTTCTCATTTCACAAATACTTCCTGAGCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206062.4 |
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| 3UTR CAA 72 bp | AGAGGATTAGTGACTTTAGTGGTTCAGAACCTTTCTTaGTCAGTAGTTAAACTCAAATGTCCTTTGATTCAT | + |
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Preference number: 4 (lower is better) Translates to: RGLVTLVVQNLS*SVVKLKCPLIH Trigger: ATGAATCAAAGGACATTTGAGTTTAACTACTGACAAAGAAAGGTTCTGAACCACTAAAGTCACTAATCCTCT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206062.4 |
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| CDS TCA 90 bp | AAATGCAGATACAATCTTGTCCTCTGGAAGGCTGATGGCTGGGCGTaGGTAGATGAAGATACAGTGTCCCAGAAACAGAGTGACTACGGT | + |
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Preference number: 5 (lower is better) Translates to: KCRYNLVLWKADGWA*VDEDTVSQKQSDYG Trigger: ACCGTAGTCACTCTGTTTCTGGGACACTGTATCTTCATCTACTCACGCCCAGCCATCAGCCTTCCAGAGGACAAGATTGTATCTGCATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073571.6 ENSMUST00000206062.4 |
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| CDS GCA 90 bp | CCTCTTGCCGTCAGAGATCTGTTGCCTCAGACTCACAAGGATGACTaGATAGGACACTACAATAATCACAAAACATACCATAGAGATCAT | + |
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Preference number: 5 (lower is better) Translates to: PLAVRDLLPQTHKDD*IGHYNNHKTYHRDH Trigger: ATGATCTCTATGGTATGTTTTGTGATTATTGTAGTGTCCTATGCAGTCATCCTTGTGAGTCTGAGGCAACAGATCTCTGACGGCAAGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073571.6 ENSMUST00000206062.4 |
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| CDS-3UTR CAA 90 bp | AGCAATGATGGGTTGATGGATTTGATTGAAATCCAAACCCAATTTTGTGACTCTATCACTGAAGTTTGGTaGATGAGGACAGCCTTTTCC | + |
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Preference number: 5 (lower is better) Translates to: SNDGLMDLIEIQTQFCDSITEVW*MRTAFS Trigger: GGAAAAGGCTGTCCTCATCAACCAAACTTCAGTGAT...AGAGTCACAAAATTGGGTTTGGATTTCAATCAAATCCATCAACCCATCATTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206062.4 |
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| CDS TCA 72 bp | TACAATCTTGTCCTCTGGAAGGCTGATGGCTGGGCGTaGGTAGATGAAGATACAGTGTCCCAGAAACAGAGT | + |
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Preference number: 6 (lower is better) Translates to: YNLVLWKADGWA*VDEDTVSQKQS Trigger: ACTCTGTTTCTGGGACACTGTATCTTCATCTACTCACGCCCAGCCATCAGCCTTCCAGAGGACAAGATTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073571.6 ENSMUST00000206062.4 |
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| CDS CAA 90 bp | GACACTACAATAATCACAAAACATACCATAGAGATCATCCCACTGTaGGAGACAACGAGAATCTCAGTGATACGGGTGTCAGTGCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: DTTIITKHTIEIIPL*ETTRISVIRVSVQA Trigger: GGCCTGCACTGACACCCGTATCACTGAGATTCTCGTTGTCTCCAACAGTGGGATGATCTCTATGGTATGTTTTGTGATTATTGTAGTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073571.6 ENSMUST00000206062.4 |
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| CDS GCA 72 bp | GTCAGAGATCTGTTGCCTCAGACTCACAAGGATGACTaGATAGGACACTACAATAATCACAAAACATACCAT | + |
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Preference number: 6 (lower is better) Translates to: VRDLLPQTHKDD*IGHYNNHKTYH Trigger: ATGGTATGTTTTGTGATTATTGTAGTGTCCTATGCAGTCATCCTTGTGAGTCTGAGGCAACAGATCTCTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073571.6 ENSMUST00000206062.4 |
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| CDS CAA 72 bp | ATAATCACAAAACATACCATAGAGATCATCCCACTGTaGGAGACAACGAGAATCTCAGTGATACGGGTGTCA | + |
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Preference number: 6 (lower is better) Translates to: IITKHTIEIIPL*ETTRISVIRVS Trigger: TGACACCCGTATCACTGAGATTCTCGTTGTCTCCAACAGTGGGATGATCTCTATGGTATGTTTTGTGATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073571.6 ENSMUST00000206062.4 |
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