Pregenerated sensors for OLFR1506 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075064Ensembl transcript IDs: ENSMUST00000213994.3
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCATCCAGTTTCCAGAGGCTGGGATCACAGGCATGCACCAATGCTaGGTTTATGGGTGCTGGCCACCGATCCCATGCTTTATGAATATC | + |
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Preference number: 1 (lower is better) Translates to: VIQFPEAGITGMHQC*VYGCWPPIPCFMNI Trigger: GATATTCATAAAGCATGGGATCGGTGGCCAGCACCCATAAACTCAGCATTGGTGCATGCCTGTGATCCCAGCCTCTGGAAACTGGATGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213994.3 |
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| 3UTR CCA 90 bp | GTTTCCAGAGGCTGGGATCACAGGCATGCACCAATGCTGAGTTTATaGGTGCTGGCCACCGATCCCATGCTTTATGAATATCAGCATTTT | + |
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Preference number: 1 (lower is better) Translates to: VSRGWDHRHAPMLSL*VLATDPMLYEYQHF Trigger: AAAATGCTGATATTCATAAAGCATGGGATCGGTGGCCAGCACCCATAAACTCAGCATTGGTGCATGCCTGTGATCCCAGCCTCTGGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213994.3 |
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| 3UTR TCA 90 bp | GTAGCCCAGATTAAAGGTGTGTTCCACCACACCCTTAATCCCAGATaGAAAGGTGTAGCCCAGATTAAAGGTGTGTTCCTTAAACTCAGA | + |
|
Preference number: 1 (lower is better) Translates to: VAQIKGVFHHTLNPR*KGVAQIKGVFLKLR Trigger: TCTGAGTTTAAGGAACACACCTTTAATCTGGGCTACACCTTTTCATCTGGGATTAAGGGTGTGGTGGAACACACCTTTAATCTGGGCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213994.3 |
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| 3UTR TCA 90 bp | GCTGAGCCACATCCCCAGTCCTCTATGTATTTAATTAGAATGTCTTaGTTCTGTGAGGAGCATTTTGCAATTCAACTTCACAGAGCAACA | + |
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Preference number: 1 (lower is better) Translates to: AEPHPQSSMYLIRMS*FCEEHFAIQLHRAT Trigger: TGTTGCTCTGTGAAGTTGAATTGCAAAATGCTCCTCACAGAATCAAGACATTCTAATTAAATACATAGAGGACTGGGGATGTGGCTCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213994.3 |
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| 3UTR GCA 72 bp | CCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTaGCTCCCAAGTGCTGGGATTAAAGGTGCGCCACCT | + |
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Preference number: 3 (lower is better) Translates to: PGWPRTQKSACL*LPSAGIKGAPP Trigger: AGGTGGCGCACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213994.3 |
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| 3UTR GCA 72 bp | AGGTCATCCAGTTTCCAGAGGCTGGGATCACAGGCATaGACCAATGCTGAGTTTATGGGTGCTGGCCACCGA | + |
|
Preference number: 3 (lower is better) Translates to: RSSSFQRLGSQA*TNAEFMGAGHR Trigger: TCGGTGGCCAGCACCCATAAACTCAGCATTGGTGCATGCCTGTGATCCCAGCCTCTGGAAACTGGATGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213994.3 |
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| 3UTR TCA 72 bp | TTTCCAGAGGCTGGGATCACAGGCATGCACCAATGCTaGGTTTATGGGTGCTGGCCACCGATCCCATGCTTT | + |
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Preference number: 3 (lower is better) Translates to: FPEAGITGMHQC*VYGCWPPIPCF Trigger: AAAGCATGGGATCGGTGGCCAGCACCCATAAACTCAGCATTGGTGCATGCCTGTGATCCCAGCCTCTGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213994.3 |
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| 3UTR TCA 72 bp | GCAGCCCAATTCCCAACAATTGTTCAGTCACAGCTGTaGATGGAAGTCCAAGGATCTAGCAGTTACTCAGTC | + |
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Preference number: 3 (lower is better) Translates to: AAQFPTIVQSQL*MEVQGSSSYSV Trigger: GACTGAGTAACTGCTAGATCCTTGGACTTCCATTCACAGCTGTGACTGAACAATTGTTGGGAATTGGGCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213994.3 |
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| 3UTR TCA 72 bp | CATCCCCAGTCCTCTATGTATTTAATTAGAATGTCTTaGTTCTGTGAGGAGCATTTTGCAATTCAACTTCAC | + |
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Preference number: 3 (lower is better) Translates to: HPQSSMYLIRMS*FCEEHFAIQLH Trigger: GTGAAGTTGAATTGCAAAATGCTCCTCACAGAATCAAGACATTCTAATTAAATACATAGAGGACTGGGGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213994.3 |
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| 3UTR CAA 72 bp | GCAAGAGCTAGACTCCCTTCTTCCAATGTCCTTATATaGTCTCCAGCAGAAGGTGTAGCCCAGATTAAAGGT | + |
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Preference number: 4 (lower is better) Translates to: ARARLPSSNVLI*SPAEGVAQIKG Trigger: ACCTTTAATCTGGGCTACACCTTCTGCTGGAGACAATATAAGGACATTGGAAGAAGGGAGTCTAGCTCTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213994.3 |
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