Pregenerated sensors for OLFR1505 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062314Ensembl transcript IDs: ENSMUST00000081520.3, ENSMUST00000216623.2, ENSMUST00000216835.2
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTACCAGCCCAGAGATGGTCCCACCCACAAGCAGCCTTTCCCCCTTaGTCACTAATTGAGAAAATGTTCCACAGCTGGATCTCATGGAGG | + |
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Preference number: 1 (lower is better) Translates to: LPAQRWSHPQAAFPP*SLIEKMFHSWISWR Trigger: CCTCCATGAGATCCAGCTGTGGAACATTTTCTCAATTAGTGATCAAGGGGGAAAGGCTGCTTGTGGGTGGGACCATCTCTGGGCTGGTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR TCA 90 bp | AGAAGCCATGGAGGGATCTTCCTTACTGGCTTGCTTCCCCTGGCTTaGTCAACTTGCTCTCTTATAGAACCCAAGACTACCAGCCCAGAG | + |
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Preference number: 1 (lower is better) Translates to: RSHGGIFLTGLLPLA*STCSLIEPKTTSPE Trigger: CTCTGGGCTGGTAGTCTTGGGTTCTATAAGAGAGCAAGTTGATCAAGCCAGGGGAAGCAAGCCAGTAAGGAAGATCCCTCCATGGCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR TCA 90 bp | GAAAGAAGTCAGGACTGGAAATCAAGCAGGGCAGAAAGCAGGAGTTaGTGCAGAAGCCATGGAGGGATCTTCCTTACTGGCTTGCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: ERSQDWKSSRAESRS*CRSHGGIFLTGLLP Trigger: GGGAAGCAAGCCAGTAAGGAAGATCCCTCCATGGCTTCTGCATCAACTCCTGCTTTCTGCCCTGCTTGATTTCCAGTCCTGACTTCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR TCA 90 bp | GGAAAGGGATTATTCATCTTACATTTCCACATTGCTGTTCATCACTaGAAGAAGTCAGGACTGGAAATCAAGCAGGGCAGAAAGCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: GKGLFILHFHIAVHH*KKSGLEIKQGRKQE Trigger: CTCCTGCTTTCTGCCCTGCTTGATTTCCAGTCCTGACTTCTTTCAGTGATGAACAGCAATGTGGAAATGTAAGATGAATAATCCCTTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR TCA 90 bp | TGGATCAGTGTCTCAGTCAGGGTTTCTATTCCAGCACAAACATCATaGCCAAGAAGCAGTTGGGGAGGAAAGGGATTATTCATCTTACAT | + |
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Preference number: 1 (lower is better) Translates to: WISVSVRVSIPAQTS*PRSSWGGKGLFILH Trigger: ATGTAAGATGAATAATCCCTTTCCTCCCCAACTGCTTCTTGGTCATGATGTTTGTGCTGGAATAGAAACCCTGACTGAGACACTGATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR GCA 90 bp | AAGCAGTTGGGGAGGAAAGGGATTATTCATCTTACATTTCCACATTaGTGTTCATCACTGAAAGAAGTCAGGACTGGAAATCAAGCAGGG | + |
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Preference number: 1 (lower is better) Translates to: KQLGRKGIIHLTFPH*CSSLKEVRTGNQAG Trigger: CCCTGCTTGATTTCCAGTCCTGACTTCTTTCAGTGATGAACAGCAATGTGGAAATGTAAGATGAATAATCCCTTTCCTCCCCAACTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR TCA 90 bp | TTTAGATACAAAGTTCACCACATTCATATATTTCCTTGCCTGGAATaGCTTGTCTGCTTTATTTCTGTTCATGGGTTCAGCATGCATGTA | + |
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Preference number: 1 (lower is better) Translates to: FRYKVHHIHIFPCLE*LVCFISVHGFSMHV Trigger: TACATGCATGCTGAACCCATGAACAGAAATAAAGCAGACAAGTCATTCCAGGCAAGGAAATATATGAATGTGGTGAACTTTGTATCTAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR TCA 90 bp | AGATTCTCTAATTCTTTAATTAGAGGAAAGCAGGGATTAAGTGACTaGCATGGTGAACTGAATGTTAGTAATGGGGGAAAGAATAAAGCA | + |
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Preference number: 1 (lower is better) Translates to: RFSNSLIRGKQGLSD*HGELNVSNGGKNKA Trigger: TGCTTTATTCTTTCCCCCATTACTAACATTCAGTTCACCATGTCAGTCACTTAATCCCTGCTTTCCTCTAATTAAAGAATTAGAGAATCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGAATGCTTGCAGCCAACTGTTGGACTGAGCATGAGGTCCCCAATGGAGGAGAGGGATCTTCCTTACTaGCTTGCTTCCCCTGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: SECLQPTVGLSMRSPMEERDLPY*LASPGL Trigger: CAAGCCAGGGGAAGCAAGCCAGTAAGGAAGATCCCT...CTCCTCCATTGGGGACCTCATGCTCAGTCCAACAGTTGGCTGCAAGCATTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR CAA 90 bp | TGGAGGGATCTTCCTTACTGGCTTGCTTCCCCTGGCTTGATCAACTaGCTCTCTTATAGAACCCAAGACTACCAGCCCAGAGATGGTCCC | + |
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Preference number: 2 (lower is better) Translates to: WRDLPYWLASPGLIN*LSYRTQDYQPRDGP Trigger: GGGACCATCTCTGGGCTGGTAGTCTTGGGTTCTATAAGAGAGCAAGTTGATCAAGCCAGGGGAAGCAAGCCAGTAAGGAAGATCCCTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGAGGGATCCATGGATCCAGCTGCATATATAGCAGAGGATGGCCTTGTTGAGGCAGAAAGCAGGAGTTaGTGCAGAAGCCATGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: MEGSMDPAAYIAEDGLVEAESRS*CRSHGG Trigger: CCCTCCATGGCTTCTGCATCAACTCCTGCTTTCTGC...CTCAACAAGGCCATCCTCTGCTATATATGCAGCTGGATCCATGGATCCCTCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR-3UTR TCA 90 bp | AGAAGTGAATGCTTGCAGCCAACTGTTGGACTGAGCATGAGGTCCCCAATGGAGAGTTCTGTGAATGCTTaGTGCCCCAGTGTAGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: RSECLQPTVGLSMRSPMESSVNA*CPSVGE Trigger: TTCCCCTACACTGGGGCATCAAGCATTCACAGAACT...CTCCATTGGGGACCTCATGCTCAGTCCAACAGTTGGCTGCAAGCATTCACTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR-3UTR CCA 90 bp | GAATGCTTGCAGCCAACTGTTGGACTGAGCATGAGGTCCCCAATGGAGGAGTTAACCAAAGAGTACCCATaGAGGGATCCATGGATCCAG | + |
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Preference number: 2 (lower is better) Translates to: ECLQPTVGLSMRSPMEELTKEYP*RDPWIQ Trigger: CTGGATCCATGGATCCCTCCATGGGTACTCTTTGGT...TAACTCCTCCATTGGGGACCTCATGCTCAGTCCAACAGTTGGCTGCAAGCATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGAGGGATCCATGGATCCAGCTGCATATATAGCAGAGGATGGCCTTGTTGAGAGTTCTGTGAATGCTTaGTGCCCCAGTGTAGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: MEGSMDPAAYIAEDGLVESSVNA*CPSVGE Trigger: TTCCCCTACACTGGGGCATCAAGCATTCACAGAACT...CTCAACAAGGCCATCCTCTGCTATATATGCAGCTGGATCCATGGATCCCTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR-3UTR TCA 90 bp | GAATGCTTGCAGCCAACTGTTGGACTGAGCATGAGGTCCCCAATGGAGGAGTTAAGGCATTTTCTCAACTaGAGCTCCTTTCTCTGTGAT | + |
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Preference number: 2 (lower is better) Translates to: ECLQPTVGLSMRSPMEELRHFLN*SSFLCD Trigger: ATCACAGAGAAAGGAGCTTCAGTTGAGAAAATGCCT...TAACTCCTCCATTGGGGACCTCATGCTCAGTCCAACAGTTGGCTGCAAGCATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR-3UTR TCA 90 bp | GAATGCTTGCAGCCAACTGTTGGACTGAGCATGAGGTCCCCAATGGAGGAGTTAATTGCTGTTCATCACTaGAAGAAGTCAGGACTGGAA | + |
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Preference number: 2 (lower is better) Translates to: ECLQPTVGLSMRSPMEELIAVHH*KKSGLE Trigger: TTCCAGTCCTGACTTCTTTCAGTGATGAACAGCAAT...TAACTCCTCCATTGGGGACCTCATGCTCAGTCCAACAGTTGGCTGCAAGCATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGAATGCTTGCAGCCAACTGTTGGACTGAGCATGAGGTCCCCAATGGAGGAGAAAATGTTCCACAGCTaGATCTCATGGAGGCATTTT | + |
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Preference number: 2 (lower is better) Translates to: SECLQPTVGLSMRSPMEEKMFHS*ISWRHF Trigger: AAAATGCCTCCATGAGATCCAGCTGTGGAACATTTT...CTCCTCCATTGGGGACCTCATGCTCAGTCCAACAGTTGGCTGCAAGCATTCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR-3UTR CCA 90 bp | GGTTTGCATCCCCATAGTGAGAACAAGAATATCAATCAACCAGATGCCCCAGATCTGGCTTGCTTCCCCTaGCTTGATCAACTTGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: GLHPHSENKNINQPDAPDLACFP*LDQLAL Trigger: GAGAGCAAGTTGATCAAGCCAGGGGAAGCAAGCCAG...ATCTGGGGCATCTGGTTGATTGATATTCTTGTTCTCACTATGGGGATGCAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGAAATCAAGCAGGGCAGAAAGCAGGAGTTGATGCAGAAGCCATGGAGGGATTTTCCTTGCCTGGAATaGCTTGTCTGCTTTATTTCT | + |
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Preference number: 2 (lower is better) Translates to: LEIKQGRKQELMQKPWRDFPCLE*LVCFIS Trigger: AGAAATAAAGCAGACAAGTCATTCCAGGCAAGGAAA...ATCCCTCCATGGCTTCTGCATCAACTCCTGCTTTCTGCCCTGCTTGATTTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGGGAGCAAAATACCCATGGGAAGAGATATAGAGACAAAGTGTGGAACAGAGATGTTGACAGGAGCCTaGTATAGCTGTCTCCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: VGSKIPMGRDIETKCGTEMLTGA*YSCLLR Trigger: TCTCAGGAGACAGCTATATCAGGCTCCTGTCAACAT...CTCTGTTCCACACTTTGTCTCTATATCTCTTCCCATGGGTATTTTGCTCCCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR-3UTR GCA 90 bp | GTGGGGAGCAAAATACCCATGGGAAGAGATATAGAGACAAAGTGTGGAACAGAGTCTTCCTTACTGGCTTaGTTCCCCTGGCTTGATCAA | + |
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Preference number: 2 (lower is better) Translates to: VGSKIPMGRDIETKCGTESSLLA*FPWLDQ Trigger: TTGATCAAGCCAGGGGAAGCAAGCCAGTAAGGAAGA...CTCTGTTCCACACTTTGTCTCTATATCTCTTCCCATGGGTATTTTGCTCCCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGGGAGCAAAATACCCATGGGAAGAGATATAGAGACAAAGTGTGGAACAGAGGCAGCCTTTCCCCCTTaGTCACTAATTGAGAAAATG | + |
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Preference number: 2 (lower is better) Translates to: VGSKIPMGRDIETKCGTEAAFPP*SLIEKM Trigger: CATTTTCTCAATTAGTGATCAAGGGGGAAAGGCTGC...CTCTGTTCCACACTTTGTCTCTATATCTCTTCCCATGGGTATTTTGCTCCCCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR-3UTR TCA 90 bp | CTTACATTTCCACATTGCTGTTCATCACTGAAAGAAGTCAGGACTGGAAATCAAGCAGAAAGCAGGAGTTaGTGCAGAAGCCATGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: LTFPHCCSSLKEVRTGNQAESRS*CRSHGG Trigger: CCCTCCATGGCTTCTGCATCAACTCCTGCTTTCTGC...TTGATTTCCAGTCCTGACTTCTTTCAGTGATGAACAGCAATGTGGAAATGTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR-3UTR GCA 90 bp | GTGGGGAGCAAAATACCCATGGGAAGAGATATAGAGACAAAGTGTGGAACAGAGACACACCATTGTGGTTaGAAAGAAGTGCATGTTGAC | + |
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Preference number: 2 (lower is better) Translates to: VGSKIPMGRDIETKCGTETHHCG*KEVHVD Trigger: GTCAACATGCACTTCTTTGCAACCACAATGGTGTGT...CTCTGTTCCACACTTTGTCTCTATATCTCTTCCCATGGGTATTTTGCTCCCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGGGAGCAAAATACCCATGGGAAGAGATATAGAGACAAAGTGTGGAACAGAGATGCACACACCATTGTaGTTGCAAAGAAGTGCATGT | + |
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Preference number: 2 (lower is better) Translates to: VGSKIPMGRDIETKCGTEMHTPL*LQRSAC Trigger: ACATGCACTTCTTTGCAACCACAATGGTGTGTGCAT...CTCTGTTCCACACTTTGTCTCTATATCTCTTCCCATGGGTATTTTGCTCCCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR CAA 90 bp | GAAGCAGTTGGGGAGGAAAGGGATTATTCATCTTACATTTCCACATaGCTGTTCATCACTGAAAGAAGTCAGGACTGGAAATCAAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: EAVGEERDYSSYIST*LFITERSQDWKSSR Trigger: CCTGCTTGATTTCCAGTCCTGACTTCTTTCAGTGATGAACAGCAATGTGGAAATGTAAGATGAATAATCCCTTTCCTCCCCAACTGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR-3UTR TCA 90 bp | GGTTTGCATCCCCATAGTGAGAACAAGAATATCAATCAACCAGATGCCCCAGATAGGCATTTTCTCAACTaGAGCTCCTTTCTCTGTGAT | + |
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Preference number: 2 (lower is better) Translates to: GLHPHSENKNINQPDAPDRHFLN*SSFLCD Trigger: ATCACAGAGAAAGGAGCTTCAGTTGAGAAAATGCCT...ATCTGGGGCATCTGGTTGATTGATATTCTTGTTCTCACTATGGGGATGCAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR-3UTR CCA 90 bp | CATGACCAAGAAGCAGTTGGGGAGGAAAGGGATTATTCATCTTACATTTCCACACAGGTGAGGCAACCTTaGGCCTTAGATTCTCTAATT | + |
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Preference number: 2 (lower is better) Translates to: HDQEAVGEERDYSSYISTQVRQP*ALDSLI Trigger: AATTAGAGAATCTAAGGCCCAAGGTTGCCTCACCTG...TGTGGAAATGTAAGATGAATAATCCCTTTCCTCCCCAACTGCTTCTTGGTCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR CAA 90 bp | AGTCAGGGTTTCTATTCCAGCACAAACATCATGACCAAGAAGCAGTaGGGGAGGAAAGGGATTATTCATCTTACATTTCCACATTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: SQGFYSSTNIMTKKQ*GRKGIIHLTFPHCC Trigger: ACAGCAATGTGGAAATGTAAGATGAATAATCCCTTTCCTCCCCAACTGCTTCTTGGTCATGATGTTTGTGCTGGAATAGAAACCCTGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR-3UTR GCA 90 bp | CTTACATTTCCACATTGCTGTTCATCACTGAAAGAAGTCAGGACTGGAAATCAATCTTCCTTACTGGCTTaGTTCCCCTGGCTTGATCAA | + |
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Preference number: 2 (lower is better) Translates to: LTFPHCCSSLKEVRTGNQSSLLA*FPWLDQ Trigger: TTGATCAAGCCAGGGGAAGCAAGCCAGTAAGGAAGA...TTGATTTCCAGTCCTGACTTCTTTCAGTGATGAACAGCAATGTGGAAATGTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR-3UTR CCA 90 bp | GGTTTGCATCCCCATAGTGAGAACAAGAATATCAATCAACCAGATGCCCCAGATAAAATGTTCCACAGCTaGATCTCATGGAGGCATTTT | + |
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Preference number: 2 (lower is better) Translates to: GLHPHSENKNINQPDAPDKMFHS*ISWRHF Trigger: AAAATGCCTCCATGAGATCCAGCTGTGGAACATTTT...ATCTGGGGCATCTGGTTGATTGATATTCTTGTTCTCACTATGGGGATGCAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR-3UTR GCA 90 bp | GTGGGGAGCAAAATACCCATGGGAAGAGATATAGAGACAAAGTGTGGAACAGAGCTTACATTTCCACATTaGTGTTCATCACTGAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: VGSKIPMGRDIETKCGTELTFPH*CSSLKE Trigger: TTCTTTCAGTGATGAACAGCAATGTGGAAATGTAAG...CTCTGTTCCACACTTTGTCTCTATATCTCTTCCCATGGGTATTTTGCTCCCCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR-3UTR CCA 90 bp | AAACATCATGACCAAGAAGCAGTTGGGGAGGAAAGGGATTATTCATCTTACATTCAGGTGAGGCAACCTTaGGCCTTAGATTCTCTAATT | + |
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Preference number: 2 (lower is better) Translates to: KHHDQEAVGEERDYSSYIQVRQP*ALDSLI Trigger: AATTAGAGAATCTAAGGCCCAAGGTTGCCTCACCTG...AATGTAAGATGAATAATCCCTTTCCTCCCCAACTGCTTCTTGGTCATGATGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR-3UTR TCA 90 bp | AAACATCATGACCAAGAAGCAGTTGGGGAGGAAAGGGATTATTCATCTTACATTATTGCTGTTCATCACTaGAAGAAGTCAGGACTGGAA | + |
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Preference number: 2 (lower is better) Translates to: KHHDQEAVGEERDYSSYIIAVHH*KKSGLE Trigger: TTCCAGTCCTGACTTCTTTCAGTGATGAACAGCAAT...AATGTAAGATGAATAATCCCTTTCCTCCCCAACTGCTTCTTGGTCATGATGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR-3UTR TCA 90 bp | AAACATCATGACCAAGAAGCAGTTGGGGAGGAAAGGGATTATTCATCTTACATTTTTCCTTGCCTGGAATaGCTTGTCTGCTTTATTTCT | + |
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Preference number: 2 (lower is better) Translates to: KHHDQEAVGEERDYSSYIFPCLE*LVCFIS Trigger: AGAAATAAAGCAGACAAGTCATTCCAGGCAAGGAAA...AATGTAAGATGAATAATCCCTTTCCTCCCCAACTGCTTCTTGGTCATGATGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR-3UTR CAA 90 bp | AGAAGTGAATGCTTGCAGCCAACTGTTGGACTGAGCATGAGGTCCCCAATGGAGGGCAGAAAGCAGGAGTaGATGCAGAAGCCATGGAGG | + |
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Preference number: 3 (lower is better) Translates to: RSECLQPTVGLSMRSPMEGRKQE*MQKPWR Trigger: CCTCCATGGCTTCTGCATCAACTCCTGCTTTCTGCC...CTCCATTGGGGACCTCATGCTCAGTCCAACAGTTGGCTGCAAGCATTCACTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR TCA 72 bp | GGAGGGATCTTCCTTACTGGCTTGCTTCCCCTGGCTTaGTCAACTTGCTCTCTTATAGAACCCAAGACTACC | + |
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Preference number: 3 (lower is better) Translates to: GGIFLTGLLPLA*STCSLIEPKTT Trigger: GGTAGTCTTGGGTTCTATAAGAGAGCAAGTTGATCAAGCCAGGGGAAGCAAGCCAGTAAGGAAGATCCCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR TCA 72 bp | ATTGTGGTTGCAAAGAAGTGCATGTTGACAGGAGCCTaGTATAGCTGTCTCCTGAGAGGCTCTGCCAGAGAC | + |
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Preference number: 3 (lower is better) Translates to: IVVAKKCMLTGA*YSCLLRGSARD Trigger: GTCTCTGGCAGAGCCTCTCAGGAGACAGCTATATCAGGCTCCTGTCAACATGCACTTCTTTGCAACCACAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR-3UTR CAA 90 bp | ATGGAGGGATCCATGGATCCAGCTGCATATATAGCAGAGGATGGCCTTGTTGAGTCAGGTGAGGCAACCTaGGGCCTTAGATTCTCTAAT | + |
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Preference number: 3 (lower is better) Translates to: MEGSMDPAAYIAEDGLVESGEAT*GLRFSN Trigger: ATTAGAGAATCTAAGGCCCAAGGTTGCCTCACCTGA...CTCAACAAGGCCATCCTCTGCTATATATGCAGCTGGATCCATGGATCCCTCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR-3UTR CAA 90 bp | AGAAGTGAATGCTTGCAGCCAACTGTTGGACTGAGCATGAGGTCCCCAATGGAGCTTGCCTGGAATGACTaGTCTGCTTTATTTCTGTTC | + |
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Preference number: 3 (lower is better) Translates to: RSECLQPTVGLSMRSPMELAWND*SALFLF Trigger: GAACAGAAATAAAGCAGACAAGTCATTCCAGGCAAG...CTCCATTGGGGACCTCATGCTCAGTCCAACAGTTGGCTGCAAGCATTCACTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR-3UTR CAA 90 bp | GAATGCTTGCAGCCAACTGTTGGACTGAGCATGAGGTCCCCAATGGAGGAGTTACTTGCCTGGAATGACTaGTCTGCTTTATTTCTGTTC | + |
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Preference number: 3 (lower is better) Translates to: ECLQPTVGLSMRSPMEELLAWND*SALFLF Trigger: GAACAGAAATAAAGCAGACAAGTCATTCCAGGCAAG...TAACTCCTCCATTGGGGACCTCATGCTCAGTCCAACAGTTGGCTGCAAGCATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR-3UTR CAA 90 bp | AGTGAATGCTTGCAGCCAACTGTTGGACTGAGCATGAGGTCCCCAATGGAGGAGTCTTACATTTCCACATaGCTGTTCATCACTGAAAGA | + |
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Preference number: 3 (lower is better) Translates to: SECLQPTVGLSMRSPMEESYIST*LFITER Trigger: TCTTTCAGTGATGAACAGCAATGTGGAAATGTAAGA...CTCCTCCATTGGGGACCTCATGCTCAGTCCAACAGTTGGCTGCAAGCATTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR TCA 72 bp | GTCTCAGTCAGGGTTTCTATTCCAGCACAAACATCATaGCCAAGAAGCAGTTGGGGAGGAAAGGGATTATTC | + |
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Preference number: 3 (lower is better) Translates to: VSVRVSIPAQTS*PRSSWGGKGLF Trigger: GAATAATCCCTTTCCTCCCCAACTGCTTCTTGGTCATGATGTTTGTGCTGGAATAGAAACCCTGACTGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR CCA 72 bp | AGACTGATAAAAAGGCCATTCAGAGACTGCCCTACCTaGGGATCTATCCCATATACAGTCACAATGCACACA | + |
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Preference number: 3 (lower is better) Translates to: RLIKRPFRDCPT*GSIPYTVTMHT Trigger: TGTGTGCATTGTGACTGTATATGGGATAGATCCCCAGGTAGGGCAGTCTCTGAATGGCCTTTTTATCAGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR-3UTR CAA 90 bp | CTTACATTTCCACATTGCTGTTCATCACTGAAAGAAGTCAGGACTGGAAATCAATCAGGTGAGGCAACCTaGGGCCTTAGATTCTCTAAT | + |
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Preference number: 3 (lower is better) Translates to: LTFPHCCSSLKEVRTGNQSGEAT*GLRFSN Trigger: ATTAGAGAATCTAAGGCCCAAGGTTGCCTCACCTGA...TTGATTTCCAGTCCTGACTTCTTTCAGTGATGAACAGCAATGTGGAAATGTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR-3UTR CAA 90 bp | GTGGGGAGCAAAATACCCATGGGAAGAGATATAGAGACAAAGTGTGGAACAGAGTCTTACATTTCCACATaGCTGTTCATCACTGAAAGA | + |
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Preference number: 3 (lower is better) Translates to: VGSKIPMGRDIETKCGTESYIST*LFITER Trigger: TCTTTCAGTGATGAACAGCAATGTGGAAATGTAAGA...CTCTGTTCCACACTTTGTCTCTATATCTCTTCCCATGGGTATTTTGCTCCCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR TCA 72 bp | TTATTCATCTTACATTTCCACATTGCTGTTCATCACTaGAAGAAGTCAGGACTGGAAATCAAGCAGGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: LFILHFHIAVHH*KKSGLEIKQGR Trigger: TCTGCCCTGCTTGATTTCCAGTCCTGACTTCTTTCAGTGATGAACAGCAATGTGGAAATGTAAGATGAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR GCA 72 bp | GGGAGGAAAGGGATTATTCATCTTACATTTCCACATTaGTGTTCATCACTGAAAGAAGTCAGGACTGGAAAT | + |
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Preference number: 3 (lower is better) Translates to: GRKGIIHLTFPH*CSSLKEVRTGN Trigger: ATTTCCAGTCCTGACTTCTTTCAGTGATGAACAGCAATGTGGAAATGTAAGATGAATAATCCCTTTCCTCCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR TCA 72 bp | AAAGTTCACCACATTCATATATTTCCTTGCCTGGAATaGCTTGTCTGCTTTATTTCTGTTCATGGGTTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: KVHHIHIFPCLE*LVCFISVHGFS Trigger: GCTGAACCCATGAACAGAAATAAAGCAGACAAGTCATTCCAGGCAAGGAAATATATGAATGTGGTGAACTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR TCA 72 bp | AATTCTTTAATTAGAGGAAAGCAGGGATTAAGTGACTaGCATGGTGAACTGAATGTTAGTAATGGGGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: NSLIRGKQGLSD*HGELNVSNGGK Trigger: CTTTCCCCCATTACTAACATTCAGTTCACCATGTCAGTCACTTAATCCCTGCTTTCCTCTAATTAAAGAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR TCA 72 bp | TATTGTTGTTCCTGGCAAGACATTTTTAAGTTGTCCTaGACTGAGCAAGTAAGAAGACACTGTATTGATGAA | + |
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Preference number: 3 (lower is better) Translates to: YCCSWQDIFKLS*TEQVRRHCIDE Trigger: TTCATCAATACAGTGTCTTCTTACTTGCTCAGTTCAGGACAACTTAAAAATGTCTTGCCAGGAACAACAATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| CDS-3UTR CCA 90 bp | AGAAGTGAATGCTTGCAGCCAACTGTTGGACTGAGCATGAGGTCCCCAATGGAGGAGAGAAGGTGCATGTaGTACGCAGAATGGCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RSECLQPTVGLSMRSPMEERRCM*YAEWPH Trigger: GTGGGGCCATTCTGCGTACCACATGCACCTTCTCTC...CTCCATTGGGGACCTCATGCTCAGTCCAACAGTTGGCTGCAAGCATTCACTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| CDS-3UTR TCA 90 bp | CTGGAAATCAAGCAGGGCAGAAAGCAGGAGTTGATGCAGAAGCCATGGAGGGATAGCGTTGCCAGTATCTaGGGGGTGATGACTGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LEIKQGRKQELMQKPWRDSVASI*GVMTEV Trigger: TACCTCAGTCATCACCCCTCAGATACTGGCAACGCT...ATCCCTCCATGGCTTCTGCATCAACTCCTGCTTTCTGCCCTGCTTGATTTCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| CDS-3UTR CCA 90 bp | CTGGAAATCAAGCAGGGCAGAAAGCAGGAGTTGATGCAGAAGCCATGGAGGGATGCCACAGCAGTGAGGTaGGAGACACATGTTGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LEIKQGRKQELMQKPWRDATAVR*ETHVEK Trigger: TTTCTCAACATGTGTCTCCCACCTCACTGCTGTGGC...ATCCCTCCATGGCTTCTGCATCAACTCCTGCTTTCTGCCCTGCTTGATTTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR CAA 72 bp | GCTCTGCCAGAGACTGACAAATACAGAAGTGAATGCTaGCAGCCAACTGTTGGACTGAGCATGAGGTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: ALPETDKYRSEC*QPTVGLSMRSP Trigger: TGGGGACCTCATGCTCAGTCCAACAGTTGGCTGCAAGCATTCACTTCTGTATTTGTCAGTCTCTGGCAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR CAA 72 bp | CTTCCTTACTGGCTTGCTTCCCCTGGCTTGATCAACTaGCTCTCTTATAGAACCCAAGACTACCAGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPYWLASPGLIN*LSYRTQDYQPR Trigger: TCTGGGCTGGTAGTCTTGGGTTCTATAAGAGAGCAAGTTGATCAAGCCAGGGGAAGCAAGCCAGTAAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| CDS-3UTR TCA 90 bp | AGTGAATGCTTGCAGCCAACTGTTGGACTGAGCATGAGGTCCCCAATGGAGGAGCTTTGCTCTTCTACCTaGAGACTTCATTCTCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: SECLQPTVGLSMRSPMEELCSST*RLHSHD Trigger: GTCATGAGAATGAAGTCTTCAGGTAGAAGAGCAAAG...CTCCTCCATTGGGGACCTCATGCTCAGTCCAACAGTTGGCTGCAAGCATTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| CDS-3UTR TCA 90 bp | CTGGAAATCAAGCAGGGCAGAAAGCAGGAGTTGATGCAGAAGCCATGGAGGGATGTGGGAGACACATGTTaGGAAAGTCTTTGCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LEIKQGRKQELMQKPWRDVGDTC*ESLCSS Trigger: AGAAGAGCAAAGACTTTCTCAACATGTGTCTCCCAC...ATCCCTCCATGGCTTCTGCATCAACTCCTGCTTTCTGCCCTGCTTGATTTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR CAA 72 bp | TGGAGGGATCTTCCTTACTGGCTTGCTTCCCCTGGCTaGATCAACTTGCTCTCTTATAGAACCCAAGACTAC | + |
|
Preference number: 4 (lower is better) Translates to: WRDLPYWLASPG*INLLSYRTQDY Trigger: GTAGTCTTGGGTTCTATAAGAGAGCAAGTTGATCAAGCCAGGGGAAGCAAGCCAGTAAGGAAGATCCCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| CDS-3UTR TCA 90 bp | AGAAGTGAATGCTTGCAGCCAACTGTTGGACTGAGCATGAGGTCCCCAATGGAGCTTTGCTCTTCTACCTaGAGACTTCATTCTCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: RSECLQPTVGLSMRSPMELCSST*RLHSHD Trigger: GTCATGAGAATGAAGTCTTCAGGTAGAAGAGCAAAG...CTCCATTGGGGACCTCATGCTCAGTCCAACAGTTGGCTGCAAGCATTCACTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| CDS-3UTR CCA 90 bp | CATGACCAAGAAGCAGTTGGGGAGGAAAGGGATTATTCATCTTACATTTCCACAGAGAGAAGGTGCATGTaGTACGCAGAATGGCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HDQEAVGEERDYSSYISTERRCM*YAEWPH Trigger: GTGGGGCCATTCTGCGTACCACATGCACCTTCTCTC...TGTGGAAATGTAAGATGAATAATCCCTTTCCTCCCCAACTGCTTCTTGGTCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| CDS-3UTR CCA 90 bp | CTGGAAATCAAGCAGGGCAGAAAGCAGGAGTTGATGCAGAAGCCATGGAGGGATCACAGTGTAGAGCAGTaGATTGCTAATAGCAACATA | + |
|
Preference number: 4 (lower is better) Translates to: LEIKQGRKQELMQKPWRDHSVEQ*IANSNI Trigger: TATGTTGCTATTAGCAATCCACTGCTCTACACTGTG...ATCCCTCCATGGCTTCTGCATCAACTCCTGCTTTCTGCCCTGCTTGATTTCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| CDS-3UTR CCA 90 bp | AGAAGTGAATGCTTGCAGCCAACTGTTGGACTGAGCATGAGGTCCCCAATGGAGATTGGGATGTGGAGTTaGACATCTACATGTATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RSECLQPTVGLSMRSPMEIGMWS*TSTCIR Trigger: TCTTATACATGTAGATGTCCAACTCCACATCCCAAT...CTCCATTGGGGACCTCATGCTCAGTCCAACAGTTGGCTGCAAGCATTCACTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| CDS-3UTR CCA 90 bp | CTGGAAATCAAGCAGGGCAGAAAGCAGGAGTTGATGCAGAAGCCATGGAGGGATATTGGGATGTGGAGTTaGACATCTACATGTATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LEIKQGRKQELMQKPWRDIGMWS*TSTCIR Trigger: TCTTATACATGTAGATGTCCAACTCCACATCCCAAT...ATCCCTCCATGGCTTCTGCATCAACTCCTGCTTTCTGCCCTGCTTGATTTCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| CDS-3UTR CCA 90 bp | CATGACCAAGAAGCAGTTGGGGAGGAAAGGGATTATTCATCTTACATTTCCACAGCCACAGCAGTGAGGTaGGAGACACATGTTGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HDQEAVGEERDYSSYISTATAVR*ETHVEK Trigger: TTTCTCAACATGTGTCTCCCACCTCACTGCTGTGGC...TGTGGAAATGTAAGATGAATAATCCCTTTCCTCCCCAACTGCTTCTTGGTCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| CDS-3UTR TCA 90 bp | CTTACATTTCCACATTGCTGTTCATCACTGAAAGAAGTCAGGACTGGAAATCAAAGCGTTGCCAGTATCTaGGGGGTGATGACTGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LTFPHCCSSLKEVRTGNQSVASI*GVMTEV Trigger: TACCTCAGTCATCACCCCTCAGATACTGGCAACGCT...TTGATTTCCAGTCCTGACTTCTTTCAGTGATGAACAGCAATGTGGAAATGTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| CDS-3UTR CCA 90 bp | GTGGGGAGCAAAATACCCATGGGAAGAGATATAGAGACAAAGTGTGGAACAGAGAAGTACATTGGGATGTaGAGTTGGACATCTACATGT | + |
|
Preference number: 4 (lower is better) Translates to: VGSKIPMGRDIETKCGTEKYIGM*SWTSTC Trigger: ACATGTAGATGTCCAACTCCACATCCCAATGTACTT...CTCTGTTCCACACTTTGTCTCTATATCTCTTCCCATGGGTATTTTGCTCCCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| CDS-3UTR CCA 90 bp | CATGACCAAGAAGCAGTTGGGGAGGAAAGGGATTATTCATCTTACATTTCCACACAGTATTGTATGCTGTaGGAGACCTGCCATTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: HDQEAVGEERDYSSYISTQYCML*ETCHLP Trigger: TGGTAAATGGCAGGTCTCCCACAGCATACAATACTG...TGTGGAAATGTAAGATGAATAATCCCTTTCCTCCCCAACTGCTTCTTGGTCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR CAA 72 bp | GGGGAGGAAAGGGATTATTCATCTTACATTTCCACATaGCTGTTCATCACTGAAAGAAGTCAGGACTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GEERDYSSYIST*LFITERSQDWK Trigger: TTTCCAGTCCTGACTTCTTTCAGTGATGAACAGCAATGTGGAAATGTAAGATGAATAATCCCTTTCCTCCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| 3UTR CAA 72 bp | TTCTATTCCAGCACAAACATCATGACCAAGAAGCAGTaGGGGAGGAAAGGGATTATTCATCTTACATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FYSSTNIMTKKQ*GRKGIIHLTFP Trigger: TGGAAATGTAAGATGAATAATCCCTTTCCTCCCCAACTGCTTCTTGGTCATGATGTTTGTGCTGGAATAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| CDS-3UTR CCA 90 bp | AAACATCATGACCAAGAAGCAGTTGGGGAGGAAAGGGATTATTCATCTTACATTAAGTACATTGGGATGTaGAGTTGGACATCTACATGT | + |
|
Preference number: 4 (lower is better) Translates to: KHHDQEAVGEERDYSSYIKYIGM*SWTSTC Trigger: ACATGTAGATGTCCAACTCCACATCCCAATGTACTT...AATGTAAGATGAATAATCCCTTTCCTCCCCAACTGCTTCTTGGTCATGATGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| CDS-3UTR CAA 90 bp | GAATGCTTGCAGCCAACTGTTGGACTGAGCATGAGGTCCCCAATGGAGGAGTTACTTCCAGGGATTTCTTaGAACCACTACGTATGTACA | + |
|
Preference number: 5 (lower is better) Translates to: ECLQPTVGLSMRSPMEELLPGIS*NHYVCT Trigger: TGTACATACGTAGTGGTTCAAAGAAATCCCTGGAAG...TAACTCCTCCATTGGGGACCTCATGCTCAGTCCAACAGTTGGCTGCAAGCATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| CDS-3UTR CAA 90 bp | GTGGGGAGCAAAATACCCATGGGAAGAGATATAGAGACAAAGTGTGGAACAGAGATGTTGAGAAAGTCTTaGCTCTTCTACCTGAAGACT | + |
|
Preference number: 5 (lower is better) Translates to: VGSKIPMGRDIETKCGTEMLRKS*LFYLKT Trigger: AGTCTTCAGGTAGAAGAGCAAAGACTTTCTCAACAT...CTCTGTTCCACACTTTGTCTCTATATCTCTTCCCATGGGTATTTTGCTCCCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| CDS-3UTR CAA 90 bp | AAACATCATGACCAAGAAGCAGTTGGGGAGGAAAGGGATTATTCATCTTACATTCTTCCAGGGATTTCTTaGAACCACTACGTATGTACA | + |
|
Preference number: 5 (lower is better) Translates to: KHHDQEAVGEERDYSSYILPGIS*NHYVCT Trigger: TGTACATACGTAGTGGTTCAAAGAAATCCCTGGAAG...AATGTAAGATGAATAATCCCTTTCCTCCCCAACTGCTTCTTGGTCATGATGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| CDS-3UTR CAA 90 bp | AAACATCATGACCAAGAAGCAGTTGGGGAGGAAAGGGATTATTCATCTTACATTTTCTTGAATGCAGCCTaGACATCCTTGTTTCTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: KHHDQEAVGEERDYSSYIFLNAA*TSLFLR Trigger: CCTAAGAAACAAGGATGTCAAGGCTGCATTCAAGAA...AATGTAAGATGAATAATCCCTTTCCTCCCCAACTGCTTCTTGGTCATGATGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| CDS-3UTR CAA 90 bp | CTTACATTTCCACATTGCTGTTCATCACTGAAAGAAGTCAGGACTGGAAATCAAATGTTGAGAAAGTCTTaGCTCTTCTACCTGAAGACT | + |
|
Preference number: 5 (lower is better) Translates to: LTFPHCCSSLKEVRTGNQMLRKS*LFYLKT Trigger: AGTCTTCAGGTAGAAGAGCAAAGACTTTCTCAACAT...TTGATTTCCAGTCCTGACTTCTTTCAGTGATGAACAGCAATGTGGAAATGTAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216623.2 ENSMUST00000216835.2 |
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| CDS CCA 72 bp | AGAAGGAGAGAGAGAAGGTGCATGTGGTACGCAGAATaGCCCCACACATTCCACAGACATATGCTCCTACTA | + |
|
Preference number: 6 (lower is better) Translates to: RRRERRCMWYAE*PHTFHRHMLLL Trigger: TAGTAGGAGCATATGTCTGTGGAATGTGTGGGGCCATTCTGCGTACCACATGCACCTTCTCTCTCTCCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081520.3 ENSMUST00000216623.2 ENSMUST00000216835.2 |
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