Pregenerated sensors for OLFR1497 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044040Ensembl transcript IDs: ENSMUST00000061993.3, ENSMUST00000217384.2
Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS GCA 90 bp | GGCTGTGACAGTCCGAATAAAGCCACTGGAAAAACCAGCCACATATaGCCCAGTTACCAGACCTACACGGGCCTTCTCAGTCATGATGGT | + |
Preference number: 5 (lower is better) Translates to: GCDSPNKATGKTSHI*PSYQTYTGLLSHDG Trigger: ACCATCATGACTGAGAAGGCCCGTGTAGGTCTGGTAACTGGGGCATATGTGGCTGGTTTTTCCAGTGGCTTTATTCGGACTGTCACAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061993.3 ENSMUST00000217384.2 |
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CDS GCA 72 bp | AGTCCGAATAAAGCCACTGGAAAAACCAGCCACATATaGCCCAGTTACCAGACCTACACGGGCCTTCTCAGT | + |
Preference number: 6 (lower is better) Translates to: SPNKATGKTSHI*PSYQTYTGLLS Trigger: ACTGAGAAGGCCCGTGTAGGTCTGGTAACTGGGGCATATGTGGCTGGTTTTTCCAGTGGCTTTATTCGGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061993.3 ENSMUST00000217384.2 |
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CDS GCA 72 bp | GAAGAGAGGGAGCCCCCACTCAGGATGTTCAGTGAATaGAGTCAGAAAGAACTCAGTCACGAAGGTGTAATT | + |
Preference number: 6 (lower is better) Translates to: EEREPPLRMFSE*SQKELSHEGVI Trigger: AATTACACCTTCGTGACTGAGTTCTTTCTGACTGCATTCACTGAACATCCTGAGTGGGGGCTCCCTCTCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061993.3 ENSMUST00000217384.2 |