Pregenerated sensors for OLFR1496 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048356Ensembl transcript IDs: ENSMUST00000209137.3
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | TCAATCAACTCTATTCAATATCCTCTTCTAGTCATGTGTACCAGACCTCTGGAAACTTATCACTCAGAGTaGGAAGTAGGAGATAATTGG | + |
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Preference number: 3 (lower is better) Translates to: SINSIQYPLLVMCTRPLETYHSE*EVGDNW Trigger: CCAATTATCTCCTACTTCCAACTCTGAGTGATAAGT...TTCCAGAGGTCTGGTACACATGACTAGAAGAGGATATTGAATAGAGTTGATTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209137.3 |
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| CDS-3UTR CCA 90 bp | TCAATCAACTCTATTCAATATCCTCTTCTAGTCATGTGTACCAGACCTCTGGAATTTTGCTTCTCAGCCTaGTTGGAGAGACCCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: SINSIQYPLLVMCTRPLEFCFSA*LERPRR Trigger: CCTCCTGGGTCTCTCCAACCAGGCTGAGAAGCAAAA...TTCCAGAGGTCTGGTACACATGACTAGAAGAGGATATTGAATAGAGTTGATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209137.3 |
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| CDS-3UTR TCA 90 bp | TCAATCAACTCTATTCAATATCCTCTTCTAGTCATGTGTACCAGACCTCTGGAATGTTTCCAATCACAGTaGCCAGGTACATACTCAAGA | + |
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Preference number: 4 (lower is better) Translates to: SINSIQYPLLVMCTRPLECFQSQ*PGTYSR Trigger: TCTTGAGTATGTACCTGGTCACTGTGATTGGAAACA...TTCCAGAGGTCTGGTACACATGACTAGAAGAGGATATTGAATAGAGTTGATTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209137.3 |
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| CDS-3UTR TCA 90 bp | TCAATCAACTCTATTCAATATCCTCTTCTAGTCATGTGTACCAGACCTCTGGAAAGAACCTGGGGTGCATaGTGTTTGTATAATTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SINSIQYPLLVMCTRPLERTWGA*CLYNSE Trigger: CTCTGAATTATACAAACATCATGCACCCCAGGTTCT...TTCCAGAGGTCTGGTACACATGACTAGAAGAGGATATTGAATAGAGTTGATTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209137.3 |
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| CDS-3UTR TCA 90 bp | TATAGAACAGTAGGCAAGGCCCACATAGATGTAAACCAACTTAAGTCACATTTCATTGATCATTGCATCTaGGCAGGAAAGTTTGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: YRTVGKAHIDVNQLKSHFIDHCI*AGKFDQ Trigger: CTGATCAAACTTTCCTGCTCAGATGCAATGATCAAT...GAAATGTGACTTAAGTTGGTTTACATCTATGTGGGCCTTGCCTACTGTTCTATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209137.3 |
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| CDS-3UTR TCA 90 bp | TATAGAACAGTAGGCAAGGCCCACATAGATGTAAACCAACTTAAGTCACATTTCAGAAAATCACAAAGATaGGTTTTTGCTTCTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: YRTVGKAHIDVNQLKSHFRKSQR*VFASQP Trigger: AGGCTGAGAAGCAAAAACTCATCTTTGTGATTTTCT...GAAATGTGACTTAAGTTGGTTTACATCTATGTGGGCCTTGCCTACTGTTCTATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209137.3 |
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| CDS-3UTR TCA 90 bp | CCAGATTTTCTACCCTCTCTATTCAATCAACTCTATTCAATATCCTCTTCTAGTCAATGGCCAGAATTATaGGACTGTTTCCAATCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PDFLPSLFNQLYSISSSSQWPEL*DCFQSQ Trigger: CTGTGATTGGAAACAGTCTCATAATTCTGGCCATTG...ACTAGAAGAGGATATTGAATAGAGTTGATTGAATAGAGAGGGTAGAAAATCTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209137.3 |
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| CDS-3UTR TCA 90 bp | TATAGAACAGTAGGCAAGGCCCACATAGATGTAAACCAACTTAAGTCACATTTCATCAAAGGGAGCAAATaGCTTTTATTGATGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YRTVGKAHIDVNQLKSHFIKGSK*LLLMSF Trigger: GAAGCTCATCAATAAAAGTCATTTGCTCCCTTTGAT...GAAATGTGACTTAAGTTGGTTTACATCTATGTGGGCCTTGCCTACTGTTCTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209137.3 |
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| CDS-3UTR GCA 90 bp | CCAGATTTTCTACCCTCTCTATTCAATCAACTCTATTCAATATCCTCTTCTAGTACAAAGATGAGTTTTTaGTTCTCAGCCTGGTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: PDFLPSLFNQLYSISSSSTKMSF*FSAWLE Trigger: CTCCAACCAGGCTGAGAAGCAAAAACTCATCTTTGT...ACTAGAAGAGGATATTGAATAGAGTTGATTGAATAGAGAGGGTAGAAAATCTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209137.3 |
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| CDS-3UTR CCA 90 bp | CCAGATTTTCTACCCTCTCTATTCAATCAACTCTATTCAATATCCTCTTCTAGTTCCACTTTCCTTCCGTaGATGAAATTCTCAGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: PDFLPSLFNQLYSISSSSSTFLP*MKFSVH Trigger: ATGTACTGAGAATTTCATCCACGGAAGGAAAGTGGA...ACTAGAAGAGGATATTGAATAGAGTTGATTGAATAGAGAGGGTAGAAAATCTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209137.3 |
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| CDS-3UTR TCA 90 bp | AACTTATTCACAACTCTATTACAGGTCTTCTTGGAACTCACTGAAAATGAGGTAATTTTACAAGTTCATTaGTCATTGCATCTGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NLFTTLLQVFLELTENEVILQVH*SLHLSR Trigger: CCTGCTCAGATGCAATGATCAATGAACTTGTAAAAT...TACCTCATTTTCAGTGAGTTCCAAGAAGACCTGTAATAGAGTTGTGAATAAGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209137.3 |
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| CDS-3UTR CAA 90 bp | CCAGATTTTCTACCCTCTCTATTCAATCAACTCTATTCAATATCCTCTTCTAGTGTCAGGGCAACAATATaGCTTAGAGCCCATGGACAG | + |
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Preference number: 5 (lower is better) Translates to: PDFLPSLFNQLYSISSSSVRATI*LRAHGQ Trigger: CTGTCCATGGGCTCTAAGCAATATTGTTGCCCTGAC...ACTAGAAGAGGATATTGAATAGAGTTGATTGAATAGAGAGGGTAGAAAATCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209137.3 |
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