Pregenerated sensors for OLFR1495 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047207Ensembl transcript IDs: ENSMUST00000061669.3, ENSMUST00000215930.2, ENSMUST00000216980.2
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCACCCAACCTATTCCTCCCTCACCACTCTAGCATGCACTTACACTaGGGTATCCAGCCTCCACAAAGCCAAGGGCCTCCCCTCCCACTG | + |
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Preference number: 1 (lower is better) Translates to: PPNLFLPHHSSMHLH*GIQPPQSQGPPLPL Trigger: CAGTGGGAGGGGAGGCCCTTGGCTTTGTGGAGGCTGGATACCGCAGTGTAAGTGCATGCTAGAGTGGTGAGGGAGGAATAGGTTGGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| 3UTR TCA 90 bp | ACTGCGGTATCCAGCCTCCACAAAGCCAAGGGCCTCCCCTCCCACTaGTACCAGATAAGGCCACCCTTTGCTCCATATGTAGTTGGAGGT | + |
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Preference number: 1 (lower is better) Translates to: TAVSSLHKAKGLPSH*YQIRPPFAPYVVGG Trigger: ACCTCCAACTACATATGGAGCAAAGGGTGGCCTTATCTGGTATCAGTGGGAGGGGAGGCCCTTGGCTTTGTGGAGGCTGGATACCGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCGGTATCCAGCCTCCACAAAGCCAAGGGCCTCCCCTCCCACTGATACCAGAATATGTAGTTGGAGGTaGACAGGAGGAAGATTAGAT | + |
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Preference number: 2 (lower is better) Translates to: LRYPASTKPRASPPTDTRICSWR*TGGRLD Trigger: ATCTAATCTTCCTCCTGTTCACCTCCAACTACATAT...TCTGGTATCAGTGGGAGGGGAGGCCCTTGGCTTTGTGGAGGCTGGATACCGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| 3UTR-3UTR TCA 90 bp | TGCGGTATCCAGCCTCCACAAAGCCAAGGGCCTCCCCTCCCACTGATACCAGATATGAATTTTCCTTACTaGAAAATACCTCCTCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: CGIQPPQSQGPPLPLIPDMNFPY*KIPPQQ Trigger: CTGCTGAGGAGGTATTTTTCAGTAAGGAAAATTCAT...ATCTGGTATCAGTGGGAGGGGAGGCCCTTGGCTTTGTGGAGGCTGGATACCGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCGGTATCCAGCCTCCACAAAGCCAAGGGCCTCCCCTCCCACTGATACCAGAAGCACTTGCTACTCTTaGAGAAATTCATGTCTTATT | + |
|
Preference number: 2 (lower is better) Translates to: LRYPASTKPRASPPTDTRSTCYS*RNSCLI Trigger: AATAAGACATGAATTTCTGCAAGAGTAGCAAGTGCT...TCTGGTATCAGTGGGAGGGGAGGCCCTTGGCTTTGTGGAGGCTGGATACCGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| 3UTR-3UTR GCA 90 bp | TATAAGGCACCCCACCCAACCTATTCCTCCCTCACCACTCTAGCATGCACTTACAGCACTTGCTACTCTTaGAGAAATTCATGTCTTATT | + |
|
Preference number: 2 (lower is better) Translates to: YKAPHPTYSSLTTLACTYSTCYS*RNSCLI Trigger: AATAAGACATGAATTTCTGCAAGAGTAGCAAGTGCT...GTAAGTGCATGCTAGAGTGGTGAGGGAGGAATAGGTTGGGTGGGGTGCCTTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTCTGCAAAATCCTCATTCCAATTAAATTTTCTCTTTGCCTCTATAAGGCACATATGTAGTTGGAGGTaGACAGGAGGAAGATTAGAT | + |
|
Preference number: 2 (lower is better) Translates to: SSAKSSFQLNFLFASIRHICSWR*TGGRLD Trigger: ATCTAATCTTCCTCCTGTTCACCTCCAACTACATAT...GTGCCTTATAGAGGCAAAGAGAAAATTTAATTGGAATGAGGATTTTGCAGAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| 3UTR GCA 72 bp | CTATTCCTCCCTCACCACTCTAGCATGCACTTACACTaGGGTATCCAGCCTCCACAAAGCCAAGGGCCTCCC | + |
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Preference number: 3 (lower is better) Translates to: LFLPHHSSMHLH*GIQPPQSQGPP Trigger: GGGAGGCCCTTGGCTTTGTGGAGGCTGGATACCGCAGTGTAAGTGCATGCTAGAGTGGTGAGGGAGGAATAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| 3UTR GCA 72 bp | CCCCACCCAACCTATTCCTCCCTCACCACTCTAGCATaGACTTACACTGCGGTATCCAGCCTCCACAAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: PHPTYSSLTTLA*TYTAVSSLHKA Trigger: GGCTTTGTGGAGGCTGGATACCGCAGTGTAAGTGCATGCTAGAGTGGTGAGGGAGGAATAGGTTGGGTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| 3UTR TCA 72 bp | TCCAGCCTCCACAAAGCCAAGGGCCTCCCCTCCCACTaGTACCAGATAAGGCCACCCTTTGCTCCATATGTA | + |
|
Preference number: 3 (lower is better) Translates to: SSLHKAKGLPSH*YQIRPPFAPYV Trigger: TACATATGGAGCAAAGGGTGGCCTTATCTGGTATCAGTGGGAGGGGAGGCCCTTGGCTTTGTGGAGGCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| 3UTR-3UTR CAA 90 bp | TCATTCCAATTAAATTTTCTCTTTGCCTCTATAAGGCACCCCACCCAACCTATTGAAGGAAAACAGAGGTaGGGATGCATTGCATTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SFQLNFLFASIRHPTQPIEGKQR*GCIALK Trigger: CTTTAATGCAATGCATCCCAACCTCTGTTTTCCTTC...AATAGGTTGGGTGGGGTGCCTTATAGAGGCAAAGAGAAAATTTAATTGGAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| 3UTR GCA 72 bp | GATTTTTGGAGAGTTGGTTTAGTGGTTAATAGCACTTaGTACTCTTGCAGAAATTCATGTCTTATTCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: DFWRVGLVVNST*YSCRNSCLILR Trigger: TCTCAGAATAAGACATGAATTTCTGCAAGAGTAGCAAGTGCTATTAACCACTAAACCAACTCTCCAAAAATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR TCA 90 bp | TGCGGTATCCAGCCTCCACAAAGCCAAGGGCCTCCCCTCCCACTGATACCAGATGCGATCCTCATCCTCTaGGGTGCTGGAGCGGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: CGIQPPQSQGPPLPLIPDAILIL*GAGAGS Trigger: AGACCCCGCTCCAGCACCTCAGAGGATGAGGATCGC...ATCTGGTATCAGTGGGAGGGGAGGCCCTTGGCTTTGTGGAGGCTGGATACCGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR GCA 90 bp | TGCGGTATCCAGCCTCCACAAAGCCAAGGGCCTCCCCTCCCACTGATACCAGATCCTCATCCTCTGAGGTaGTGGAGCGGGGTCTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: CGIQPPQSQGPPLPLIPDPHPLR*WSGVSG Trigger: ACCTGAGACCCCGCTCCAGCACCTCAGAGGATGAGG...ATCTGGTATCAGTGGGAGGGGAGGCCCTTGGCTTTGTGGAGGCTGGATACCGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR GCA 90 bp | CTTACACTGCGGTATCCAGCCTCCACAAAGCCAAGGGCCTCCCCTCCCACTGATCCTCATCCTCTGAGGTaGTGGAGCGGGGTCTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LTLRYPASTKPRASPPTDPHPLR*WSGVSG Trigger: ACCTGAGACCCCGCTCCAGCACCTCAGAGGATGAGG...ATCAGTGGGAGGGGAGGCCCTTGGCTTTGTGGAGGCTGGATACCGCAGTGTAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CCA 90 bp | CTGCGGTATCCAGCCTCCACAAAGCCAAGGGCCTCCCCTCCCACTGATACCAGAGTGTGCAGGGAGCTGTaGTTGCACACCACCCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: LRYPASTKPRASPPTDTRVCREL*LHTTQI Trigger: TATCTGGGTGGTGTGCAACCACAGCTCCCTGCACAC...TCTGGTATCAGTGGGAGGGGAGGCCCTTGGCTTTGTGGAGGCTGGATACCGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CCA 90 bp | CTGCGGTATCCAGCCTCCACAAAGCCAAGGGCCTCCCCTCCCACTGATACCAGAACTGCCTGGTTCACATaGATGTCAGCACAGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRYPASTKPRASPPTDTRTAWFT*MSAQAR Trigger: CCTGGCCTGTGCTGACATCCATGTGAACCAGGCAGT...TCTGGTATCAGTGGGAGGGGAGGCCCTTGGCTTTGTGGAGGCTGGATACCGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR TCA 90 bp | CTGCGGTATCCAGCCTCCACAAAGCCAAGGGCCTCCCCTCCCACTGATACCAGACCCACAACCAGCCAGTaGTATGGGTTTTTGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRYPASTKPRASPPTDTRPTTSQ*YGFLVS Trigger: GGAGACCAAAAACCCATATCACTGGCTGGTTGTGGG...TCTGGTATCAGTGGGAGGGGAGGCCCTTGGCTTTGTGGAGGCTGGATACCGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR GCA 90 bp | CTTACACTGCGGTATCCAGCCTCCACAAAGCCAAGGGCCTCCCCTCCCACTGATAAGTACATGGGAGTGTaGAGGGAGCTGTGGTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LTLRYPASTKPRASPPTDKYMGV*RELWLH Trigger: GTGCAACCACAGCTCCCTGCACACTCCCATGTACTT...ATCAGTGGGAGGGGAGGCCCTTGGCTTTGTGGAGGCTGGATACCGCAGTGTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CCA 90 bp | CTGCGGTATCCAGCCTCCACAAAGCCAAGGGCCTCCCCTCCCACTGATACCAGAGAGCCTATTACCATCTaGACACACAGTTTCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LRYPASTKPRASPPTDTREPITI*THSFWV Trigger: GACCCAGAAACTGTGTGTCCAGATGGTAATAGGCTC...TCTGGTATCAGTGGGAGGGGAGGCCCTTGGCTTTGTGGAGGCTGGATACCGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR TCA 90 bp | ATCCAGCCTCCACAAAGCCAAGGGCCTCCCCTCCCACTGATACCAGATAAGGCCGCAGATTTCCACAAATaGCAGACTGCCCAGGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: IQPPQSQGPPLPLIPDKAADFHK*QTAQEE Trigger: TTCTTCCTGGGCAGTCTGTCATTTGTGGAAATCTGC...GGCCTTATCTGGTATCAGTGGGAGGGGAGGCCCTTGGCTTTGTGGAGGCTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR GCA 90 bp | TGCGGTATCCAGCCTCCACAAAGCCAAGGGCCTCCCCTCCCACTGATACCAGATCAAGGAGAGAAGAAGTaGCAAGCTCAAAGAGCCTAT | + |
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Preference number: 4 (lower is better) Translates to: CGIQPPQSQGPPLPLIPDQGEKK*QAQRAY Trigger: ATAGGCTCTTTGAGCTTGGCACTTCTTCTCTCCTTG...ATCTGGTATCAGTGGGAGGGGAGGCCCTTGGCTTTGTGGAGGCTGGATACCGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CCA 90 bp | TATAAGGCACCCCACCCAACCTATTCCTCCCTCACCACTCTAGCATGCACTTACGTGTGCAGGGAGCTGTaGTTGCACACCACCCAGATA | + |
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Preference number: 4 (lower is better) Translates to: YKAPHPTYSSLTTLACTYVCREL*LHTTQI Trigger: TATCTGGGTGGTGTGCAACCACAGCTCCCTGCACAC...GTAAGTGCATGCTAGAGTGGTGAGGGAGGAATAGGTTGGGTGGGGTGCCTTATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CCA 90 bp | TGCGGTATCCAGCCTCCACAAAGCCAAGGGCCTCCCCTCCCACTGATACCAGATGGTCTCCAAAGATGTTaGAAAGAATCAAGGGCACCA | + |
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Preference number: 4 (lower is better) Translates to: CGIQPPQSQGPPLPLIPDGLQRC*KESRAP Trigger: TGGTGCCCTTGATTCTTTCCAACATCTTTGGAGACC...ATCTGGTATCAGTGGGAGGGGAGGCCCTTGGCTTTGTGGAGGCTGGATACCGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CCA 90 bp | CTGCGGTATCCAGCCTCCACAAAGCCAAGGGCCTCCCCTCCCACTGATACCAGAAACCAGCCAGTGATATaGGTTTTTGGTCTCCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: LRYPASTKPRASPPTDTRNQPVI*VFGLQR Trigger: TCTTTGGAGACCAAAAACCCATATCACTGGCTGGTT...TCTGGTATCAGTGGGAGGGGAGGCCCTTGGCTTTGTGGAGGCTGGATACCGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CCA 90 bp | ATCCAGCCTCCACAAAGCCAAGGGCCTCCCCTCCCACTGATACCAGATAAGGCCACATCACAGAGGAAGTaGTTGATTTCAAGGCGGTGT | + |
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Preference number: 4 (lower is better) Translates to: IQPPQSQGPPLPLIPDKATSQRK*LISRRC Trigger: ACACCGCCTTGAAATCAACCACTTCCTCTGTGATGT...GGCCTTATCTGGTATCAGTGGGAGGGGAGGCCCTTGGCTTTGTGGAGGCTGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR TCA 90 bp | CTTACACTGCGGTATCCAGCCTCCACAAAGCCAAGGGCCTCCCCTCCCACTGATGTGGACCAGATTTGTTaGAGAAAGGGTTTCTATCCA | + |
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Preference number: 4 (lower is better) Translates to: LTLRYPASTKPRASPPTDVDQIC*RKGFYP Trigger: TGGATAGAAACCCTTTCTTCAACAAATCTGGTCCAC...ATCAGTGGGAGGGGAGGCCCTTGGCTTTGTGGAGGCTGGATACCGCAGTGTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR GCA 90 bp | TGCGGTATCCAGCCTCCACAAAGCCAAGGGCCTCCCCTCCCACTGATACCAGATGAGGGTGAAGAGGATTaGTTGAAATTCCGGAACATT | + |
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Preference number: 4 (lower is better) Translates to: CGIQPPQSQGPPLPLIPDEGEED*LKFRNI Trigger: AATGTTCCGGAATTTCAAGCAATCCTCTTCACCCTC...ATCTGGTATCAGTGGGAGGGGAGGCCCTTGGCTTTGTGGAGGCTGGATACCGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CCA 90 bp | CTTACACTGCGGTATCCAGCCTCCACAAAGCCAAGGGCCTCCCCTCCCACTGATAACCAGCCAGTGATATaGGTTTTTGGTCTCCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: LTLRYPASTKPRASPPTDNQPVI*VFGLQR Trigger: TCTTTGGAGACCAAAAACCCATATCACTGGCTGGTT...ATCAGTGGGAGGGGAGGCCCTTGGCTTTGTGGAGGCTGGATACCGCAGTGTAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CCA 90 bp | CTGCGGTATCCAGCCTCCACAAAGCCAAGGGCCTCCCCTCCCACTGATACCAGATCAGAAGCTGGTACATaGAAGAAAGAGTTCCTCAAA | + |
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Preference number: 4 (lower is better) Translates to: LRYPASTKPRASPPTDTRSEAGT*KKEFLK Trigger: TTTGAGGAACTCTTTCTTCCATGTACCAGCTTCTGA...TCTGGTATCAGTGGGAGGGGAGGCCCTTGGCTTTGTGGAGGCTGGATACCGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CCA 90 bp | CTTACACTGCGGTATCCAGCCTCCACAAAGCCAAGGGCCTCCCCTCCCACTGATTCAGAAGCTGGTACATaGAAGAAAGAGTTCCTCAAA | + |
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Preference number: 4 (lower is better) Translates to: LTLRYPASTKPRASPPTDSEAGT*KKEFLK Trigger: TTTGAGGAACTCTTTCTTCCATGTACCAGCTTCTGA...ATCAGTGGGAGGGGAGGCCCTTGGCTTTGTGGAGGCTGGATACCGCAGTGTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR GCA 90 bp | CTTTGCCTCTATAAGGCACCCCACCCAACCTATTCCTCCCTCACCACTCTAGCAGAGGGTGAAGAGGATTaGTTGAAATTCCGGAACATT | + |
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Preference number: 4 (lower is better) Translates to: LCLYKAPHPTYSSLTTLAEGEED*LKFRNI Trigger: AATGTTCCGGAATTTCAAGCAATCCTCTTCACCCTC...TGCTAGAGTGGTGAGGGAGGAATAGGTTGGGTGGGGTGCCTTATAGAGGCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR GCA 90 bp | TATAAGGCACCCCACCCAACCTATTCCTCCCTCACCACTCTAGCATGCACTTACCAAGGAGAGAAGAAGTaGCAAGCTCAAAGAGCCTAT | + |
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Preference number: 4 (lower is better) Translates to: YKAPHPTYSSLTTLACTYQGEKK*QAQRAY Trigger: ATAGGCTCTTTGAGCTTGGCACTTCTTCTCTCCTTG...GTAAGTGCATGCTAGAGTGGTGAGGGAGGAATAGGTTGGGTGGGGTGCCTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR TCA 90 bp | TCCTCTGCAAAATCCTCATTCCAATTAAATTTTCTCTTTGCCTCTATAAGGCACGCGATCCTCATCCTCTaGGGTGCTGGAGCGGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: SSAKSSFQLNFLFASIRHAILIL*GAGAGS Trigger: AGACCCCGCTCCAGCACCTCAGAGGATGAGGATCGC...GTGCCTTATAGAGGCAAAGAGAAAATTTAATTGGAATGAGGATTTTGCAGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR TCA 90 bp | CTTAATTGTTTTTCATTTAGAGCTGATTGTCATAGATACTCTACTCCACACCCAGCGATCCTCATCCTCTaGGGTGCTGGAGCGGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: LNCFSFRADCHRYSTPHPAILIL*GAGAGS Trigger: AGACCCCGCTCCAGCACCTCAGAGGATGAGGATCGC...TGGGTGTGGAGTAGAGTATCTATGACAATCAGCTCTAAATGAAAAACAATTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061669.3 ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR GCA 90 bp | CTTAATTGTTTTTCATTTAGAGCTGATTGTCATAGATACTCTACTCCACACCCACCTCATCCTCTGAGGTaGTGGAGCGGGGTCTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: LNCFSFRADCHRYSTPHPPHPLR*WSGVSG Trigger: ACCTGAGACCCCGCTCCAGCACCTCAGAGGATGAGG...TGGGTGTGGAGTAGAGTATCTATGACAATCAGCTCTAAATGAAAAACAATTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061669.3 ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CCA 90 bp | TCCTCTGCAAAATCCTCATTCCAATTAAATTTTCTCTTTGCCTCTATAAGGCACCATCCTCTGAGGTGCTaGAGCGGGGTCTCAGGTACA | + |
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Preference number: 4 (lower is better) Translates to: SSAKSSFQLNFLFASIRHHPLRC*SGVSGT Trigger: TGTACCTGAGACCCCGCTCCAGCACCTCAGAGGATG...GTGCCTTATAGAGGCAAAGAGAAAATTTAATTGGAATGAGGATTTTGCAGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CCA 90 bp | TCCTCTGCAAAATCCTCATTCCAATTAAATTTTCTCTTTGCCTCTATAAGGCACACTGCCTGGTTCACATaGATGTCAGCACAGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SSAKSSFQLNFLFASIRHTAWFT*MSAQAR Trigger: CCTGGCCTGTGCTGACATCCATGTGAACCAGGCAGT...GTGCCTTATAGAGGCAAAGAGAAAATTTAATTGGAATGAGGATTTTGCAGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CCA 90 bp | CTTAATTGTTTTTCATTTAGAGCTGATTGTCATAGATACTCTACTCCACACCCACATCCTCTGAGGTGCTaGAGCGGGGTCTCAGGTACA | + |
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Preference number: 4 (lower is better) Translates to: LNCFSFRADCHRYSTPHPHPLRC*SGVSGT Trigger: TGTACCTGAGACCCCGCTCCAGCACCTCAGAGGATG...TGGGTGTGGAGTAGAGTATCTATGACAATCAGCTCTAAATGAAAAACAATTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061669.3 ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CCA 90 bp | CTTAATTGTTTTTCATTTAGAGCTGATTGTCATAGATACTCTACTCCACACCCAGTGTGCAGGGAGCTGTaGTTGCACACCACCCAGATA | + |
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Preference number: 4 (lower is better) Translates to: LNCFSFRADCHRYSTPHPVCREL*LHTTQI Trigger: TATCTGGGTGGTGTGCAACCACAGCTCCCTGCACAC...TGGGTGTGGAGTAGAGTATCTATGACAATCAGCTCTAAATGAAAAACAATTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061669.3 ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CCA 90 bp | CTTAATTGTTTTTCATTTAGAGCTGATTGTCATAGATACTCTACTCCACACCCAACTGCCTGGTTCACATaGATGTCAGCACAGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LNCFSFRADCHRYSTPHPTAWFT*MSAQAR Trigger: CCTGGCCTGTGCTGACATCCATGTGAACCAGGCAGT...TGGGTGTGGAGTAGAGTATCTATGACAATCAGCTCTAAATGAAAAACAATTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061669.3 ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR TCA 90 bp | CTTAATTGTTTTTCATTTAGAGCTGATTGTCATAGATACTCTACTCCACACCCACCCACAACCAGCCAGTaGTATGGGTTTTTGGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: LNCFSFRADCHRYSTPHPPTTSQ*YGFLVS Trigger: GGAGACCAAAAACCCATATCACTGGCTGGTTGTGGG...TGGGTGTGGAGTAGAGTATCTATGACAATCAGCTCTAAATGAAAAACAATTAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000061669.3 ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR TCA 90 bp | TCCTCTGCAAAATCCTCATTCCAATTAAATTTTCTCTTTGCCTCTATAAGGCACCACAGAGGAAGTGGTTaGTTTCAAGGCGGTGTCTAC | + |
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Preference number: 4 (lower is better) Translates to: SSAKSSFQLNFLFASIRHHRGSG*FQGGVY Trigger: GTAGACACCGCCTTGAAATCAACCACTTCCTCTGTG...GTGCCTTATAGAGGCAAAGAGAAAATTTAATTGGAATGAGGATTTTGCAGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR GCA 90 bp | CTTAATTGTTTTTCATTTAGAGCTGATTGTCATAGATACTCTACTCCACACCCAAAGTACATGGGAGTGTaGAGGGAGCTGTGGTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LNCFSFRADCHRYSTPHPKYMGV*RELWLH Trigger: GTGCAACCACAGCTCCCTGCACACTCCCATGTACTT...TGGGTGTGGAGTAGAGTATCTATGACAATCAGCTCTAAATGAAAAACAATTAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061669.3 ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR TCA 90 bp | CTTAATTGTTTTTCATTTAGAGCTGATTGTCATAGATACTCTACTCCACACCCACACAGAGGAAGTGGTTaGTTTCAAGGCGGTGTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: LNCFSFRADCHRYSTPHPHRGSG*FQGGVY Trigger: GTAGACACCGCCTTGAAATCAACCACTTCCTCTGTG...TGGGTGTGGAGTAGAGTATCTATGACAATCAGCTCTAAATGAAAAACAATTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061669.3 ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CCA 90 bp | TCCTCTGCAAAATCCTCATTCCAATTAAATTTTCTCTTTGCCTCTATAAGGCACGAGCCTATTACCATCTaGACACACAGTTTCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSAKSSFQLNFLFASIRHEPITI*THSFWV Trigger: GACCCAGAAACTGTGTGTCCAGATGGTAATAGGCTC...GTGCCTTATAGAGGCAAAGAGAAAATTTAATTGGAATGAGGATTTTGCAGAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR TCA 90 bp | CTTAATTGTTTTTCATTTAGAGCTGATTGTCATAGATACTCTACTCCACACCCAGCAGATTTCCACAAATaGCAGACTGCCCAGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LNCFSFRADCHRYSTPHPADFHK*QTAQEE Trigger: TTCTTCCTGGGCAGTCTGTCATTTGTGGAAATCTGC...TGGGTGTGGAGTAGAGTATCTATGACAATCAGCTCTAAATGAAAAACAATTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061669.3 ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR TCA 90 bp | CTTAATTGTTTTTCATTTAGAGCTGATTGTCATAGATACTCTACTCCACACCCAAGGGCACCACATCTGTaGTGTAGCAGATTTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LNCFSFRADCHRYSTPHPRAPHL*CSRFPQ Trigger: TTGTGGAAATCTGCTACATCACAGATGTGGTGCCCT...TGGGTGTGGAGTAGAGTATCTATGACAATCAGCTCTAAATGAAAAACAATTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061669.3 ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR GCA 90 bp | CTTAATTGTTTTTCATTTAGAGCTGATTGTCATAGATACTCTACTCCACACCCACGTCCCTCTGCAGAATaGATGCGTAGAATGGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LNCFSFRADCHRYSTPHPRPSAE*MRRMVE Trigger: TTCTACCATTCTACGCATGCATTCTGCAGAGGGACG...TGGGTGTGGAGTAGAGTATCTATGACAATCAGCTCTAAATGAAAAACAATTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061669.3 ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CCA 90 bp | CTTAATTGTTTTTCATTTAGAGCTGATTGTCATAGATACTCTACTCCACACCCAGAGCCTATTACCATCTaGACACACAGTTTCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LNCFSFRADCHRYSTPHPEPITI*THSFWV Trigger: GACCCAGAAACTGTGTGTCCAGATGGTAATAGGCTC...TGGGTGTGGAGTAGAGTATCTATGACAATCAGCTCTAAATGAAAAACAATTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061669.3 ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR GCA 90 bp | CTTAATTGTTTTTCATTTAGAGCTGATTGTCATAGATACTCTACTCCACACCCACAAGGAGAGAAGAAGTaGCAAGCTCAAAGAGCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: LNCFSFRADCHRYSTPHPQGEKK*QAQRAY Trigger: ATAGGCTCTTTGAGCTTGGCACTTCTTCTCTCCTTG...TGGGTGTGGAGTAGAGTATCTATGACAATCAGCTCTAAATGAAAAACAATTAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061669.3 ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CCA 90 bp | CTTAATTGTTTTTCATTTAGAGCTGATTGTCATAGATACTCTACTCCACACCCAGGTCTCCAAAGATGTTaGAAAGAATCAAGGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LNCFSFRADCHRYSTPHPGLQRC*KESRAP Trigger: TGGTGCCCTTGATTCTTTCCAACATCTTTGGAGACC...TGGGTGTGGAGTAGAGTATCTATGACAATCAGCTCTAAATGAAAAACAATTAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061669.3 ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CCA 90 bp | CTTAATTGTTTTTCATTTAGAGCTGATTGTCATAGATACTCTACTCCACACCCAACATCACAGAGGAAGTaGTTGATTTCAAGGCGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LNCFSFRADCHRYSTPHPTSQRK*LISRRC Trigger: ACACCGCCTTGAAATCAACCACTTCCTCTGTGATGT...TGGGTGTGGAGTAGAGTATCTATGACAATCAGCTCTAAATGAAAAACAATTAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061669.3 ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CCA 90 bp | TCATTCCAATTAAATTTTCTCTTTGCCTCTATAAGGCACCCCACCCAACCTATTACTAGTGTCAGAAGCTaGTACATGGAAGAAAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SFQLNFLFASIRHPTQPITSVRS*YMEERV Trigger: AACTCTTTCTTCCATGTACCAGCTTCTGACACTAGT...AATAGGTTGGGTGGGGTGCCTTATAGAGGCAAAGAGAAAATTTAATTGGAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR TCA 90 bp | CTTAATTGTTTTTCATTTAGAGCTGATTGTCATAGATACTCTACTCCACACCCAGTGGACCAGATTTGTTaGAGAAAGGGTTTCTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LNCFSFRADCHRYSTPHPVDQIC*RKGFYP Trigger: TGGATAGAAACCCTTTCTTCAACAAATCTGGTCCAC...TGGGTGTGGAGTAGAGTATCTATGACAATCAGCTCTAAATGAAAAACAATTAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061669.3 ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR GCA 90 bp | CTTAATTGTTTTTCATTTAGAGCTGATTGTCATAGATACTCTACTCCACACCCAGAGGGTGAAGAGGATTaGTTGAAATTCCGGAACATT | + |
|
Preference number: 4 (lower is better) Translates to: LNCFSFRADCHRYSTPHPEGEED*LKFRNI Trigger: AATGTTCCGGAATTTCAAGCAATCCTCTTCACCCTC...TGGGTGTGGAGTAGAGTATCTATGACAATCAGCTCTAAATGAAAAACAATTAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061669.3 ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CCA 90 bp | CTTAATTGTTTTTCATTTAGAGCTGATTGTCATAGATACTCTACTCCACACCCAAACCAGCCAGTGATATaGGTTTTTGGTCTCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LNCFSFRADCHRYSTPHPNQPVI*VFGLQR Trigger: TCTTTGGAGACCAAAAACCCATATCACTGGCTGGTT...TGGGTGTGGAGTAGAGTATCTATGACAATCAGCTCTAAATGAAAAACAATTAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000061669.3 ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CCA 90 bp | TCCTCTGCAAAATCCTCATTCCAATTAAATTTTCTCTTTGCCTCTATAAGGCACACTAGTGTCAGAAGCTaGTACATGGAAGAAAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSAKSSFQLNFLFASIRHTSVRS*YMEERV Trigger: AACTCTTTCTTCCATGTACCAGCTTCTGACACTAGT...GTGCCTTATAGAGGCAAAGAGAAAATTTAATTGGAATGAGGATTTTGCAGAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CCA 90 bp | CTTAATTGTTTTTCATTTAGAGCTGATTGTCATAGATACTCTACTCCACACCCATCAGAAGCTGGTACATaGAAGAAAGAGTTCCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LNCFSFRADCHRYSTPHPSEAGT*KKEFLK Trigger: TTTGAGGAACTCTTTCTTCCATGTACCAGCTTCTGA...TGGGTGTGGAGTAGAGTATCTATGACAATCAGCTCTAAATGAAAAACAATTAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061669.3 ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CCA 90 bp | CTTAATTGTTTTTCATTTAGAGCTGATTGTCATAGATACTCTACTCCACACCCAACTAGTGTCAGAAGCTaGTACATGGAAGAAAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LNCFSFRADCHRYSTPHPTSVRS*YMEERV Trigger: AACTCTTTCTTCCATGTACCAGCTTCTGACACTAGT...TGGGTGTGGAGTAGAGTATCTATGACAATCAGCTCTAAATGAAAAACAATTAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061669.3 ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CAA 90 bp | CTGCGGTATCCAGCCTCCACAAAGCCAAGGGCCTCCCCTCCCACTGATACCAGAGGTGAAGAGGATTGCTaGAAATTCCGGAACATTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LRYPASTKPRASPPTDTRGEEDC*KFRNIG Trigger: ACCAATGTTCCGGAATTTCAAGCAATCCTCTTCACC...TCTGGTATCAGTGGGAGGGGAGGCCCTTGGCTTTGTGGAGGCTGGATACCGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CAA 90 bp | CTTACACTGCGGTATCCAGCCTCCACAAAGCCAAGGGCCTCCCCTCCCACTGATTCACAGAGGAAGTGGTaGATTTCAAGGCGGTGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: LTLRYPASTKPRASPPTDSQRKW*ISRRCL Trigger: TAGACACCGCCTTGAAATCAACCACTTCCTCTGTGA...ATCAGTGGGAGGGGAGGCCCTTGGCTTTGTGGAGGCTGGATACCGCAGTGTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CAA 90 bp | TGCGGTATCCAGCCTCCACAAAGCCAAGGGCCTCCCCTCCCACTGATACCAGATGGTGAAGAGGATTGCTaGAAATTCCGGAACATTGGT | + |
|
Preference number: 5 (lower is better) Translates to: CGIQPPQSQGPPLPLIPDGEEDC*KFRNIG Trigger: ACCAATGTTCCGGAATTTCAAGCAATCCTCTTCACC...ATCTGGTATCAGTGGGAGGGGAGGCCCTTGGCTTTGTGGAGGCTGGATACCGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CAA 90 bp | TGCGGTATCCAGCCTCCACAAAGCCAAGGGCCTCCCCTCCCACTGATACCAGATTCTGGTGGACCAGATTaGTTGAAGAAAGGGTTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: CGIQPPQSQGPPLPLIPDSGGPD*LKKGFL Trigger: TAGAAACCCTTTCTTCAACAAATCTGGTCCACCAGA...ATCTGGTATCAGTGGGAGGGGAGGCCCTTGGCTTTGTGGAGGCTGGATACCGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CAA 90 bp | TATAAGGCACCCCACCCAACCTATTCCTCCCTCACCACTCTAGCATGCACTTACAGAGAAAAAGAACATTaGTGTCCCACAACCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: YKAPHPTYSSLTTLACTYREKEH*CPTTSQ Trigger: CTGGCTGGTTGTGGGACACAAATGTTCTTTTTCTCT...GTAAGTGCATGCTAGAGTGGTGAGGGAGGAATAGGTTGGGTGGGGTGCCTTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CAA 90 bp | TATAAGGCACCCCACCCAACCTATTCCTCCCTCACCACTCTAGCATGCACTTACTCTGGTGGACCAGATTaGTTGAAGAAAGGGTTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: YKAPHPTYSSLTTLACTYSGGPD*LKKGFL Trigger: TAGAAACCCTTTCTTCAACAAATCTGGTCCACCAGA...GTAAGTGCATGCTAGAGTGGTGAGGGAGGAATAGGTTGGGTGGGGTGCCTTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CAA 90 bp | TCCTCTGCAAAATCCTCATTCCAATTAAATTTTCTCTTTGCCTCTATAAGGCACGGTGGACCAGATTTGTaGAAGAAAGGGTTTCTATCC | + |
|
Preference number: 5 (lower is better) Translates to: SSAKSSFQLNFLFASIRHGGPDL*KKGFLS Trigger: GGATAGAAACCCTTTCTTCAACAAATCTGGTCCACC...GTGCCTTATAGAGGCAAAGAGAAAATTTAATTGGAATGAGGATTTTGCAGAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CAA 90 bp | CTTAATTGTTTTTCATTTAGAGCTGATTGTCATAGATACTCTACTCCACACCCATCACAGAGGAAGTGGTaGATTTCAAGGCGGTGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: LNCFSFRADCHRYSTPHPSQRKW*ISRRCL Trigger: TAGACACCGCCTTGAAATCAACCACTTCCTCTGTGA...TGGGTGTGGAGTAGAGTATCTATGACAATCAGCTCTAAATGAAAAACAATTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061669.3 ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CAA 90 bp | CTTAATTGTTTTTCATTTAGAGCTGATTGTCATAGATACTCTACTCCACACCCAGGTGGACCAGATTTGTaGAAGAAAGGGTTTCTATCC | + |
|
Preference number: 5 (lower is better) Translates to: LNCFSFRADCHRYSTPHPGGPDL*KKGFLS Trigger: GGATAGAAACCCTTTCTTCAACAAATCTGGTCCACC...TGGGTGTGGAGTAGAGTATCTATGACAATCAGCTCTAAATGAAAAACAATTAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061669.3 ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CAA 90 bp | CTTAATTGTTTTTCATTTAGAGCTGATTGTCATAGATACTCTACTCCACACCCAGGTGAAGAGGATTGCTaGAAATTCCGGAACATTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LNCFSFRADCHRYSTPHPGEEDC*KFRNIG Trigger: ACCAATGTTCCGGAATTTCAAGCAATCCTCTTCACC...TGGGTGTGGAGTAGAGTATCTATGACAATCAGCTCTAAATGAAAAACAATTAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061669.3 ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CAA 90 bp | CTTAATTGTTTTTCATTTAGAGCTGATTGTCATAGATACTCTACTCCACACCCAAGAGAAAAAGAACATTaGTGTCCCACAACCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LNCFSFRADCHRYSTPHPREKEH*CPTTSQ Trigger: CTGGCTGGTTGTGGGACACAAATGTTCTTTTTCTCT...TGGGTGTGGAGTAGAGTATCTATGACAATCAGCTCTAAATGAAAAACAATTAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000061669.3 ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS-3UTR CAA 90 bp | CTTAATTGTTTTTCATTTAGAGCTGATTGTCATAGATACTCTACTCCACACCCATCTGGTGGACCAGATTaGTTGAAGAAAGGGTTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: LNCFSFRADCHRYSTPHPSGGPD*LKKGFL Trigger: TAGAAACCCTTTCTTCAACAAATCTGGTCCACCAGA...TGGGTGTGGAGTAGAGTATCTATGACAATCAGCTCTAAATGAAAAACAATTAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061669.3 ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS CCA 72 bp | GCCAGGCGCATAATAGGAGCCACATCACAGAGGAAGTaGTTGATTTCAAGGCGGTGTCTACAGAACGGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: ARRIIGATSQRK*LISRRCLQNGN Trigger: ATTGCCGTTCTGTAGACACCGCCTTGAAATCAACCACTTCCTCTGTGATGTGGCTCCTATTATGCGCCTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061669.3 ENSMUST00000215930.2 ENSMUST00000216980.2 |
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| CDS GCA 72 bp | GAAAGTAAAGGCAGTAAGCTCCAAGGAGAGAAGAAGTaGCAAGCTCAAAGAGCCTATTACCATCTGGACACA | + |
|
Preference number: 6 (lower is better) Translates to: ESKGSKLQGEKK*QAQRAYYHLDT Trigger: TGTGTCCAGATGGTAATAGGCTCTTTGAGCTTGGCACTTCTTCTCTCCTTGGAGCTTACTGCCTTTACTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061669.3 ENSMUST00000215930.2 ENSMUST00000216980.2 |
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