Pregenerated sensors for OLFR1490 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061387Ensembl transcript IDs: ENSMUST00000080162.2, ENSMUST00000213900.2
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCACCACCACTCCATCCCTCATCTGCACCCTCCCTTCTGCCTATATaGAAGTTCTCCCTCACCCACCCATACTCTCACATTCCACCGCTC | + |
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Preference number: 1 (lower is better) Translates to: PPPLHPSSAPSLLPI*KFSLTHPYSHIPPL Trigger: GAGCGGTGGAATGTGAGAGTATGGGTGGGTGAGGGAGAACTTCCATATAGGCAGAAGGGAGGGTGCAGATGAGGGATGGAGTGGTGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR CCA 90 bp | AAGACTAGCCGGGCAGTAGTGGTGCACCCCTTTAATCCCAGCACTTaGGAGGCAGAGGCAGGTAGATTTCTGAGTTTGAGGTCAGTCTGG | + |
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Preference number: 1 (lower is better) Translates to: KTSRAVVVHPFNPST*EAEAGRFLSLRSVW Trigger: CCAGACTGACCTCAAACTCAGAAATCTACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGGGTGCACCACTACTGCCCGGCTAGTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR CCA 90 bp | TCCTTGAGTTCAGTCTGGCATTTGGCTTCAAACATCTGCCTCTGCTaGCTGGACTTCCCCAGGAACTGCCACATTTGGTTCCTCTCCACA | + |
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Preference number: 1 (lower is better) Translates to: SLSSVWHLASNICLC*LDFPRNCHIWFLST Trigger: TGTGGAGAGGAACCAAATGTGGCAGTTCCTGGGGAAGTCCAGCCAGCAGAGGCAGATGTTTGAAGCCAAATGCCAGACTGAACTCAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR CCA 90 bp | ACATATGCGTATCATTCATGGAGATTTTCACAGATTCAAGCACATTaGGTCCCAGCACTGAGAGGAAAAAGTGGATTTCCTTCCATAACC | + |
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Preference number: 1 (lower is better) Translates to: TYAYHSWRFSQIQAH*VPALRGKSGFPSIT Trigger: GGTTATGGAAGGAAATCCACTTTTTCCTCTCAGTGCTGGGACCCAATGTGCTTGAATCTGTGAAAATCTCCATGAATGATACGCATATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR TCA 90 bp | CTAGGGATTATTGTATCATTTCTATATTCCTATTCCTTTACAGGCTaGGCCAGAAAGGTAGCCAGTTTGAAGCAGGCCAACACTCAAATG | + |
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Preference number: 1 (lower is better) Translates to: LGIIVSFLYSYSFTG*ARKVASLKQANTQM Trigger: CATTTGAGTGTTGGCCTGCTTCAAACTGGCTACCTTTCTGGCTCAGCCTGTAAAGGAATAGGAATATAGAAATGATACAATAATCCCTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR-3UTR TCA 90 bp | ATACCACTTTCCAGTTACCCCTCCACCACCACTCCATCCCTCATCTGCACCCTCGTCTGGTCTACAGAATaGGTTCCAGGACAGCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: IPLSSYPSTTTPSLICTLVWSTE*VPGQPG Trigger: CCCTGGCTGTCCTGGAACTCATTCTGTAGACCAGAC...GAGGGTGCAGATGAGGGATGGAGTGGTGGTGGAGGGGTAACTGGAAAGTGGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR CAA 90 bp | CATTTGGTTCCTCTCCACAAGCTCTTCTTGAACCCAGCAACTGTGTaGCATTTGGTGTCTGCAGACCTGATGCATCCCCGAGGTGGGGGC | + |
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Preference number: 2 (lower is better) Translates to: HLVPLHKLFLNPATV*HLVSADLMHPRGGG Trigger: GCCCCCACCTCGGGGATGCATCAGGTCTGCAGACACCAAATGCAACACAGTTGCTGGGTTCAAGAAGAGCTTGTGGAGAGGAACCAAATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR-3UTR TCA 90 bp | ATATACCACTTTCCAGTTACCCCTCCACCACCACTCCATCCCTCATCTGCACCCCCTTCCCCTGTTGTCTaGCAAGGCCATCCTCTACTA | + |
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Preference number: 2 (lower is better) Translates to: IYHFPVTPPPPLHPSSAPPSPVV*QGHPLL Trigger: TAGTAGAGGATGGCCTTGTCAGACAACAGGGGAAGG...GGGTGCAGATGAGGGATGGAGTGGTGGTGGAGGGGTAACTGGAAAGTGGTATAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR-3UTR GCA 90 bp | ATACCACTTTCCAGTTACCCCTCCACCACCACTCCATCCCTCATCTGCACCCTCACCCAGCAACTGTGTTaGATTTGGTGTCTGCAGACC | + |
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Preference number: 2 (lower is better) Translates to: IPLSSYPSTTTPSLICTLTQQLC*IWCLQT Trigger: GGTCTGCAGACACCAAATGCAACACAGTTGCTGGGT...GAGGGTGCAGATGAGGGATGGAGTGGTGGTGGAGGGGTAACTGGAAAGTGGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR-3UTR TCA 90 bp | CCACCCCATGATATACCACTTTCCAGTTACCCCTCCACCACCACTCCATCCCTCTATTCCTTTACAGGCTaGGCCAGAAAGGTAGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: PPHDIPLSSYPSTTTPSLYSFTG*ARKVAS Trigger: ACTGGCTACCTTTCTGGCTCAGCCTGTAAAGGAATA...GAGGGATGGAGTGGTGGTGGAGGGGTAACTGGAAAGTGGTATATCATGGGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR CAA 90 bp | CTTCCCCAGGAACTGCCACATTTGGTTCCTCTCCACAAGCTCTTCTaGAACCCAGCAACTGTGTTGCATTTGGTGTCTGCAGACCTGATG | + |
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Preference number: 2 (lower is better) Translates to: LPQELPHLVPLHKLF*NPATVLHLVSADLM Trigger: CATCAGGTCTGCAGACACCAAATGCAACACAGTTGCTGGGTTCAAGAAGAGCTTGTGGAGAGGAACCAAATGTGGCAGTTCCTGGGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR-3UTR CCA 90 bp | ATATACCACTTTCCAGTTACCCCTCCACCACCACTCCATCCCTCATCTGCACCCAGTACACTCCTTGATTaGTGGTCTAGTCTCTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: IYHFPVTPPPPLHPSSAPSTLLD*WSSLWE Trigger: CTCCCAGAGACTAGACCACCAATCAAGGAGTGTACT...GGGTGCAGATGAGGGATGGAGTGGTGGTGGAGGGGTAACTGGAAAGTGGTATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR-3UTR CCA 90 bp | ATACCACTTTCCAGTTACCCCTCCACCACCACTCCATCCCTCATCTGCACCCTCTGTTCATTTCTCTTTTaGCCCCTGTTCATCCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: IPLSSYPSTTTPSLICTLCSFLF*PLFILW Trigger: CCAAAGGATGAACAGGGGCCAAAAGAGAAATGAACA...GAGGGTGCAGATGAGGGATGGAGTGGTGGTGGAGGGGTAACTGGAAAGTGGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR-3UTR TCA 90 bp | ATACCACTTTCCAGTTACCCCTCCACCACCACTCCATCCCTCATCTGCACCCTCTGGTCAGTACAAAATTaGTTCGTACTGAGTACTCTG | + |
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Preference number: 2 (lower is better) Translates to: IPLSSYPSTTTPSLICTLWSVQN*FVLSTL Trigger: CAGAGTACTCAGTACGAATCAATTTTGTACTGACCA...GAGGGTGCAGATGAGGGATGGAGTGGTGGTGGAGGGGTAACTGGAAAGTGGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR-3UTR CCA 90 bp | GTACATATCCACTGGAGGTGGTCTCCACAAGTCCTATCTCCCCTTTCTCTGCCCGCCTCTGTTTCTCACTaGTTTCTGTTAAGAATGCAT | + |
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Preference number: 2 (lower is better) Translates to: VHIHWRWSPQVLSPLSLPASVSH*FLLRMH Trigger: ATGCATTCTTAACAGAAACCAGTGAGAAACAGAGGC...GGGCAGAGAAAGGGGAGATAGGACTTGTGGAGACCACCTCCAGTGGATATGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR-3UTR GCA 90 bp | TTCAATCTTTATAACCACAAGACTAGGTATGCAGTAACAGAATGGGGTGAGGGAGTTGCATTTGGTGTCTaGAGACCTGATGCATCCCCG | + |
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Preference number: 2 (lower is better) Translates to: FNLYNHKTRYAVTEWGEGVAFGV*RPDASP Trigger: CGGGGATGCATCAGGTCTGCAGACACCAAATGCAAC...TCCCTCACCCCATTCTGTTACTGCATACCTAGTCTTGTGGTTATAAAGATTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR-3UTR GCA 90 bp | TTCAATCTTTATAACCACAAGACTAGGTATGCAGTAACAGAATGGGGTGAGGGACTGCACCCTCCCTTCTaGCTATATGGAAGTTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: FNLYNHKTRYAVTEWGEGLHPPF*LYGSSP Trigger: GGGAGAACTTCCATATAGGCAGAAGGGAGGGTGCAG...TCCCTCACCCCATTCTGTTACTGCATACCTAGTCTTGTGGTTATAAAGATTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR CAA 90 bp | TACATATGCGTATCATTCATGGAGATTTTCACAGATTCAAGCACATaGGGTCCCAGCACTGAGAGGAAAAAGTGGATTTCCTTCCATAAC | + |
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Preference number: 2 (lower is better) Translates to: YICVSFMEIFTDSST*GPSTERKKWISFHN Trigger: GTTATGGAAGGAAATCCACTTTTTCCTCTCAGTGCTGGGACCCAATGTGCTTGAATCTGTGAAAATCTCCATGAATGATACGCATATGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR-3UTR GCA 90 bp | AACACATTTCAGTACTCCAAAGTGCAAACCATATTCAAAGTAGTTAGCACCAGTCAGAGACGAAACTTTTaGAGTGGCACAGGGTTTTGC | + |
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Preference number: 2 (lower is better) Translates to: NTFQYSKVQTIFKVVSTSQRRNF*SGTGFC Trigger: GCAAAACCCTGTGCCACTGCAAAAGTTTCGTCTCTG...ACTGGTGCTAACTACTTTGAATATGGTTTGCACTTTGGAGTACTGAAATGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR-3UTR TCA 90 bp | TTCAATCTTTATAACCACAAGACTAGGTATGCAGTAACAGAATGGGGTGAGGGAGTCCCCTATTTAAATTaGCTAGAGAGTTCCACATTT | + |
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Preference number: 2 (lower is better) Translates to: FNLYNHKTRYAVTEWGEGVPYLN*LESSTF Trigger: AAATGTGGAACTCTCTAGTCAATTTAAATAGGGGAC...TCCCTCACCCCATTCTGTTACTGCATACCTAGTCTTGTGGTTATAAAGATTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR-3UTR TCA 90 bp | TTCAATCTTTATAACCACAAGACTAGGTATGCAGTAACAGAATGGGGTGAGGGAGAATCTATCTCCAATTaGCATTCAGTTACCTACTTG | + |
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Preference number: 2 (lower is better) Translates to: FNLYNHKTRYAVTEWGEGESISN*HSVTYL Trigger: CAAGTAGGTAACTGAATGTCAATTGGAGATAGATTC...TCCCTCACCCCATTCTGTTACTGCATACCTAGTCTTGTGGTTATAAAGATTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR-3UTR CCA 90 bp | AACACATTTCAGTACTCCAAAGTGCAAACCATATTCAAAGTAGTTAGCACCAGTCTTCTTAGACCTTATTaGTTAAAAGTGTGTTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: NTFQYSKVQTIFKVVSTSLLRPY*LKVCFL Trigger: GAGGAAACACACTTTTAACCAATAAGGTCTAAGAAG...ACTGGTGCTAACTACTTTGAATATGGTTTGCACTTTGGAGTACTGAAATGTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR-3UTR GCA 90 bp | CATTCAGTTACCTACTTGATCATGATGGATGATGTCTTTGATATGTTCATGGATTATCTCCCCTTTCTCTaGCCATATGGTTTTTATATT | + |
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Preference number: 2 (lower is better) Translates to: HSVTYLIMMDDVFDMFMDYLPFL*PYGFYI Trigger: AATATAAAAACCATATGGGCAGAGAAAGGGGAGATA...ATCCATGAACATATCAAAGACATCATCCATCATGATCAAGTAGGTAACTGAATG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR TCA 72 bp | ACCCAGCAACTGTGTTGCATTTGGTGTCTGCAGACCTaGTGCATCCCCGAGGTGGGGGCTGTTCCTCAGTTG | + |
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Preference number: 3 (lower is better) Translates to: TQQLCCIWCLQT*CIPEVGAVPQL Trigger: CAACTGAGGAACAGCCCCCACCTCGGGGATGCATCAGGTCTGCAGACACCAAATGCAACACAGTTGCTGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR CCA 72 bp | ACTCTCACATTCCACCGCTCCAGCATCTCCCTACTCTaGGGCATTACACCTCCCCAAGACCAAGGGCTTCTC | + |
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Preference number: 3 (lower is better) Translates to: TLTFHRSSISLL*GITPPQDQGLL Trigger: GAGAAGCCCTTGGTCTTGGGGAGGTGTAATGCCCCAGAGTAGGGAGATGCTGGAGCGGTGGAATGTGAGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR GCA 72 bp | CTTCTTGAACCCAGCAACTGTGTTGCATTTGGTGTCTaGAGACCTGATGCATCCCCGAGGTGGGGGCTGTTC | + |
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Preference number: 3 (lower is better) Translates to: LLEPSNCVAFGV*RPDASPRWGLF Trigger: GAACAGCCCCCACCTCGGGGATGCATCAGGTCTGCAGACACCAAATGCAACACAGTTGCTGGGTTCAAGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR CCA 72 bp | ATCCCTCAGCCATGGGCTGTACATATCCACTGGAGGTaGTCTCCACAAGTCCTATCTCCCCTTTCTCTGCCC | + |
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Preference number: 3 (lower is better) Translates to: IPQPWAVHIHWR*SPQVLSPLSLP Trigger: GGGCAGAGAAAGGGGAGATAGGACTTGTGGAGACCACCTCCAGTGGATATGTACAGCCCATGGCTGAGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR CCA 72 bp | CCTTTGAGATGGGTGGTTGCCTCCATCCCTCAGCCATaGGCTGTACATATCCACTGGAGGTGGTCTCCACAA | + |
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Preference number: 3 (lower is better) Translates to: PLRWVVASIPQP*AVHIHWRWSPQ Trigger: TTGTGGAGACCACCTCCAGTGGATATGTACAGCCCATGGCTGAGGGATGGAGGCAACCACCCATCTCAAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR GCA 72 bp | TCCTTGAGTTCAGTCTGGCATTTGGCTTCAAACATCTaGCTCTGCTGGCTGGACTTCCCCAGGAACTGCCAC | + |
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Preference number: 3 (lower is better) Translates to: SLSSVWHLASNI*LCWLDFPRNCH Trigger: GTGGCAGTTCCTGGGGAAGTCCAGCCAGCAGAGGCAGATGTTTGAAGCCAAATGCCAGACTGAACTCAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR GCA 72 bp | AGTTCAGTCTGGCATTTGGCTTCAAACATCTGCCTCTaGTGGCTGGACTTCCCCAGGAACTGCCACATTTGG | + |
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Preference number: 3 (lower is better) Translates to: SSVWHLASNICL*WLDFPRNCHIW Trigger: CCAAATGTGGCAGTTCCTGGGGAAGTCCAGCCAGCAGAGGCAGATGTTTGAAGCCAAATGCCAGACTGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR CCA 72 bp | TCTGGCATTTGGCTTCAAACATCTGCCTCTGCTGGCTaGACTTCCCCAGGAACTGCCACATTTGGTTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: SGIWLQTSASAG*TSPGTATFGSS Trigger: AGAGGAACCAAATGTGGCAGTTCCTGGGGAAGTCCAGCCAGCAGAGGCAGATGTTTGAAGCCAAATGCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR CCA 72 bp | TCAGTCTGGCATTTGGCTTCAAACATCTGCCTCTGCTaGCTGGACTTCCCCAGGAACTGCCACATTTGGTTC | + |
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Preference number: 3 (lower is better) Translates to: SVWHLASNICLC*LDFPRNCHIWF Trigger: GAACCAAATGTGGCAGTTCCTGGGGAAGTCCAGCCAGCAGAGGCAGATGTTTGAAGCCAAATGCCAGACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR TCA 72 bp | TCCCCAAGACCAAGGGCTTCTCCTTCCCCTGTTGTCTaGCAAGGCCATCCTCTACTACATATGTATCTAGAG | + |
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Preference number: 3 (lower is better) Translates to: SPRPRASPSPVV*QGHPLLHMYLE Trigger: CTCTAGATACATATGTAGTAGAGGATGGCCTTGTCAGACAACAGGGGAAGGAGAAGCCCTTGGTCTTGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR-3UTR CAA 90 bp | TTGTTGTGGCCCTCAATATCTCTCTCTACAAGGTGTCTCTTCTTAGACCTTATTCAGTGGCACAGGGTTTaGCTTTGGCTGGGACTGAAC | + |
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Preference number: 3 (lower is better) Translates to: LLWPSISLSTRCLFLDLIQWHRV*LWLGLN Trigger: GTTCAGTCCCAGCCAAAGCAAAACCCTGTGCCACTG...AATAAGGTCTAAGAAGAGACACCTTGTAGAGAGAGATATTGAGGGCCACAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR-3UTR CAA 90 bp | TTGTTGTGGCCCTCAATATCTCTCTCTACAAGGTGTCTCTTCTTAGACCTTATTGCACAGGGTTTTGCTTaGGCTGGGACTGAACTTTGG | + |
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Preference number: 3 (lower is better) Translates to: LLWPSISLSTRCLFLDLIAQGFA*AGTELW Trigger: CCAAAGTTCAGTCCCAGCCAAAGCAAAACCCTGTGC...AATAAGGTCTAAGAAGAGACACCTTGTAGAGAGAGATATTGAGGGCCACAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR-3UTR CAA 90 bp | GTTCCTCAGTTGGCACGTCCTTCAGTCTCTGTTCATTTCTCTTTTGGCCCCTGTGTATTTAATGAGTCTTaGGTTATCATGTGGGAGGTT | + |
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Preference number: 3 (lower is better) Translates to: VPQLARPSVSVHFSFGPCVFNES*VIMWEV Trigger: AACCTCCCACATGATAACCAAAGACTCATTAAATAC...ACAGGGGCCAAAAGAGAAATGAACAGAGACTGAAGGACGTGCCAACTGAGGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR CCA 72 bp | TCAAGCACATTGGGTCCCAGCACTGAGAGGAAAAAGTaGATTTCCTTCCATAACCAAGAATCTATCTCCAAT | + |
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Preference number: 3 (lower is better) Translates to: SSTLGPSTERKK*ISFHNQESISN Trigger: ATTGGAGATAGATTCTTGGTTATGGAAGGAAATCCACTTTTTCCTCTCAGTGCTGGGACCCAATGTGCTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR-3UTR CAA 90 bp | TTCAATCTTTATAACCACAAGACTAGGTATGCAGTAACAGAATGGGGTGAGGGAGGTAGATTTCTGAGTTaGAGGTCAGTCTGGTCTACA | + |
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Preference number: 3 (lower is better) Translates to: FNLYNHKTRYAVTEWGEGGRFLS*RSVWST Trigger: TGTAGACCAGACTGACCTCAAACTCAGAAATCTACC...TCCCTCACCCCATTCTGTTACTGCATACCTAGTCTTGTGGTTATAAAGATTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR TCA 72 bp | AGCGGAGTCACTTTAGAAACATGGTCAGTACAAAATTaGTTCGTACTGAGTACTCTGCCAGCTCTTAGATCT | + |
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Preference number: 3 (lower is better) Translates to: SGVTLETWSVQN*FVLSTLPALRS Trigger: AGATCTAAGAGCTGGCAGAGTACTCAGTACGAATCAATTTTGTACTGACCATGTTTCTAAAGTGACTCCGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR TCA 72 bp | ATTGTATCATTTCTATATTCCTATTCCTTTACAGGCTaGGCCAGAAAGGTAGCCAGTTTGAAGCAGGCCAAC | + |
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Preference number: 3 (lower is better) Translates to: IVSFLYSYSFTG*ARKVASLKQAN Trigger: GTTGGCCTGCTTCAAACTGGCTACCTTTCTGGCTCAGCCTGTAAAGGAATAGGAATATAGAAATGATACAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR CCA 72 bp | TATCATTCATGGAGATTTTCACAGATTCAAGCACATTaGGTCCCAGCACTGAGAGGAAAAAGTGGATTTCCT | + |
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Preference number: 3 (lower is better) Translates to: YHSWRFSQIQAH*VPALRGKSGFP Trigger: AGGAAATCCACTTTTTCCTCTCAGTGCTGGGACCCAATGTGCTTGAATCTGTGAAAATCTCCATGAATGATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR-3UTR CAA 90 bp | CATTCAGTTACCTACTTGATCATGATGGATGATGTCTTTGATATGTTCATGGATCTCCACAAGCTCTTCTaGAACCCAGCAACTGTGTTG | + |
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Preference number: 3 (lower is better) Translates to: HSVTYLIMMDDVFDMFMDLHKLF*NPATVL Trigger: CAACACAGTTGCTGGGTTCAAGAAGAGCTTGTGGAG...ATCCATGAACATATCAAAGACATCATCCATCATGATCAAGTAGGTAACTGAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR TCA 72 bp | ATATCAAGGCGACTCTGGCCTCATATGATGAGTTTGTaGGTGTTCCTTCTGTTTCTATTTTGGAGAATAATT | + |
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Preference number: 3 (lower is better) Translates to: ISRRLWPHMMSL*VFLLFLFWRII Trigger: AATTATTCTCCAAAATAGAAACAGAAGGAACACTCACAAACTCATCATATGAGGCCAGAGTCGCCTTGATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR TCA 72 bp | ACATACTACAAGAGGAGAAAAGTAACACAAATCCACTaGCAAAACTTACATTCTACACTGATGACCTGCCTA | + |
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Preference number: 3 (lower is better) Translates to: TYYKRRKVTQIH*QNLHSTLMTCL Trigger: TAGGCAGGTCATCAGTGTAGAATGTAAGTTTTGTCAGTGGATTTGTGTTACTTTTCTCCTCTTGTAGTATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR TCA 72 bp | TGGATTTCCTTCCATAACCAAGAATCTATCTCCAATTaGCATTCAGTTACCTACTTGATCATGATGGATGAT | + |
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Preference number: 3 (lower is better) Translates to: WISFHNQESISN*HSVTYLIMMDD Trigger: ATCATCCATCATGATCAAGTAGGTAACTGAATGTCAATTGGAGATAGATTCTTGGTTATGGAAGGAAATCCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR TCA 72 bp | AATACAGAAATTCACAACACTCAGTTTTATGTAATGTaGTTACTTAATCAACTTGCTCCCCTAGGGCTCAGA | + |
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Preference number: 3 (lower is better) Translates to: NTEIHNTQFYVM*LLNQLAPLGLR Trigger: TCTGAGCCCTAGGGGAGCAAGTTGATTAAGTAATCACATTACATAAAACTGAGTGTTGTGAATTTCTGTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| CDS-3UTR TCA 90 bp | CCACCCCATGATATACCACTTTCCAGTTACCCCTCCACCACCACTCCATCCCTCCGGGGCGCAAGTACATaGAGGCACAGCAGCCATACT | + |
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Preference number: 4 (lower is better) Translates to: PPHDIPLSSYPSTTTPSLRGAST*RHSSHT Trigger: AGTATGGCTGCTGTGCCTTCATGTACTTGCGCCCCG...GAGGGATGGAGTGGTGGTGGAGGGGTAACTGGAAAGTGGTATATCATGGGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR CAA 72 bp | CCTCTGCTGGCTGGACTTCCCCAGGAACTGCCACATTaGGTTCCTCTCCACAAGCTCTTCTTGAACCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: PLLAGLPQELPH*VPLHKLFLNPA Trigger: TGCTGGGTTCAAGAAGAGCTTGTGGAGAGGAACCAAATGTGGCAGTTCCTGGGGAAGTCCAGCCAGCAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| CDS-3UTR CCA 90 bp | ATACCACTTTCCAGTTACCCCTCCACCACCACTCCATCCCTCATCTGCACCCTCGAGACGCATCAGTGGTaGAGCATCACAAAAGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: IPLSSYPSTTTPSLICTLETHQW*SITKEV Trigger: CACTTCTTTTGTGATGCTCCACCACTGATGCGTCTC...GAGGGTGCAGATGAGGGATGGAGTGGTGGTGGAGGGGTAACTGGAAAGTGGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| CDS-3UTR TCA 90 bp | GGGGCTGTTCCTCAGTTGGCACGTCCTTCAGTCTCTGTTCATTTCTCTTTTGGCACAGGAACAAGCCAATaGCCACAGAAGCCACAACCA | + |
|
Preference number: 4 (lower is better) Translates to: GAVPQLARPSVSVHFSFGTGTSQ*PQKPQP Trigger: TGGTTGTGGCTTCTGTGGTCATTGGCTTGTTCCTGT...GCCAAAAGAGAAATGAACAGAGACTGAAGGACGTGCCAACTGAGGAACAGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR CAA 72 bp | ACACCTCCCCAAGACCAAGGGCTTCTCCTTCCCCTGTaGTCTGACAAGGCCATCCTCTACTACATATGTATC | + |
|
Preference number: 4 (lower is better) Translates to: TPPQDQGLLLPL*SDKAILYYICI Trigger: GATACATATGTAGTAGAGGATGGCCTTGTCAGACAACAGGGGAAGGAGAAGCCCTTGGTCTTGGGGAGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| CDS-3UTR TCA 90 bp | GGGGCTGTTCCTCAGTTGGCACGTCCTTCAGTCTCTGTTCATTTCTCTTTTGGCCACTACCAAGTCCAATaGGGAAAACCATCTGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GAVPQLARPSVSVHFSFGHYQVQ*GKPSEW Trigger: CCACTCAGATGGTTTTCCTCATTGGACTTGGTAGTG...GCCAAAAGAGAAATGAACAGAGACTGAAGGACGTGCCAACTGAGGAACAGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| CDS-3UTR TCA 90 bp | GGGGCTGTTCCTCAGTTGGCACGTCCTTCAGTCTCTGTTCATTTCTCTTTTGGCTCTATTCCCCTGTCCTaGCAGAATGGTAGACAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GAVPQLARPSVSVHFSFGSIPLS*QNGRQK Trigger: CTTCTGTCTACCATTCTGTCAGGACAGGGGAATAGA...GCCAAAAGAGAAATGAACAGAGACTGAAGGACGTGCCAACTGAGGAACAGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| CDS-3UTR TCA 90 bp | GTACATATCCACTGGAGGTGGTCTCCACAAGTCCTATCTCCCCTTTCTCTGCCCCATAGGTGGTGGCAATaGAAAAGAAAGGCACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VHIHWRWSPQVLSPLSLPHRWWQ*KRKAQQ Trigger: TTGCTGTGCCTTTCTTTTTCATTGCCACCACCTATG...GGGCAGAGAAAGGGGAGATAGGACTTGTGGAGACCACCTCCAGTGGATATGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| CDS-3UTR TCA 90 bp | ATGATTCTGTTTGTTGTGGCCCTCAATATCTCTCTCTACAAGGTGTCTCTTCTTGTGACGGCCAGCTGCTaGGTGGAGTTTGAGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: MILFVVALNISLYKVSLLVTASC*VEFEHS Trigger: GCTGTGCTCAAACTCCACTCAGCAGCTGGCCGTCAC...AAGAAGAGACACCTTGTAGAGAGAGATATTGAGGGCCACAACAAACAGAATCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| CDS-3UTR CCA 90 bp | GTACATATCCACTGGAGGTGGTCTCCACAAGTCCTATCTCCCCTTTCTCTGCCCAGCTCAGCAGAGAAATaGTCTTCTCAGACTGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VHIHWRWSPQVLSPLSLPSSAEK*SSQTES Trigger: ACTTTCAGTCTGAGAAGACCATTTCTCTGCTGAGCT...GGGCAGAGAAAGGGGAGATAGGACTTGTGGAGACCACCTCCAGTGGATATGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| CDS-3UTR CCA 90 bp | GTTCCTCAGTTGGCACGTCCTTCAGTCTCTGTTCATTTCTCTTTTGGCCCCTGTAGAAAGGCACAGCAATaGCTAGTGTGGCTGCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: VPQLARPSVSVHFSFGPCRKAQQ*LVWLPL Trigger: TAATGGCAGCCACACTAGCCATTGCTGTGCCTTTCT...ACAGGGGCCAAAAGAGAAATGAACAGAGACTGAAGGACGTGCCAACTGAGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR CAA 72 bp | GAACTGCCACATTTGGTTCCTCTCCACAAGCTCTTCTaGAACCCAGCAACTGTGTTGCATTTGGTGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ELPHLVPLHKLF*NPATVLHLVSA Trigger: TGCAGACACCAAATGCAACACAGTTGCTGGGTTCAAGAAGAGCTTGTGGAGAGGAACCAAATGTGGCAGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| CDS-3UTR TCA 90 bp | AACACTGATACATACCATCTTAAGATAAAGACTAGCCGGGCAGTAGTGGTGCACCTGCTGAGTGGAGTTTaGGCACAGCAGCCACTATCA | + |
|
Preference number: 4 (lower is better) Translates to: NTDTYHLKIKTSRAVVVHLLSGV*AQQPLS Trigger: TGATAGTGGCTGCTGTGCTCAAACTCCACTCAGCAG...GTGCACCACTACTGCCCGGCTAGTCTTTATCTTAAGATGGTATGTATCAGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| CDS-3UTR TCA 90 bp | ATATTCCTATTCCTTTACAGGCTGAGCCAGAAAGGTAGCCAGTTTGAAGCAGGCATGGTCTTCTCAGACTaGAAGTTGTTGGCCAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: IFLFLYRLSQKGSQFEAGMVFSD*KLLAKM Trigger: CATTTTGGCCAACAACTTTCAGTCTGAGAAGACCAT...GCCTGCTTCAAACTGGCTACCTTTCTGGCTCAGCCTGTAAAGGAATAGGAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| CDS-3UTR GCA 90 bp | TTGTTGTGGCCCTCAATATCTCTCTCTACAAGGTGTCTCTTCTTAGACCTTATTCTATCCCTGAGAGGCTaGCCAGGAAATAGTACATGG | + |
|
Preference number: 4 (lower is better) Translates to: LLWPSISLSTRCLFLDLILSLRG*PGNSTW Trigger: CCATGTACTATTTCCTGGGCAGCCTCTCAGGGATAG...AATAAGGTCTAAGAAGAGACACCTTGTAGAGAGAGATATTGAGGGCCACAACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| CDS-3UTR CCA 90 bp | GATAACACTGATACATACCATCTTAAGATAAAGACTAGCCGGGCAGTAGTGGTGGTTGGCCAAAATGTGTaGTACCACCACTGCAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: DNTDTYHLKIKTSRAVVVVGQNV*YHHCSV Trigger: TACACTGCAGTGGTGGTACCACACATTTTGGCCAAC...CACCACTACTGCCCGGCTAGTCTTTATCTTAAGATGGTATGTATCAGTGTTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| CDS-3UTR CCA 90 bp | ATGATTCTGTTTGTTGTGGCCCTCAATATCTCTCTCTACAAGGTGTCTCTTCTTCAGCAATGGCTAGTGTaGCTGCCATTAGCACAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: MILFVVALNISLYKVSLLQQWLV*LPLAQR Trigger: TCTCTGTGCTAATGGCAGCCACACTAGCCATTGCTG...AAGAAGAGACACCTTGTAGAGAGAGATATTGAGGGCCACAACAAACAGAATCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR CAA 72 bp | GTATCATTCATGGAGATTTTCACAGATTCAAGCACATaGGGTCCCAGCACTGAGAGGAAAAAGTGGATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSFMEIFTDSST*GPSTERKKWIS Trigger: GGAAATCCACTTTTTCCTCTCAGTGCTGGGACCCAATGTGCTTGAATCTGTGAAAATCTCCATGAATGATAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| CDS-3UTR CCA 90 bp | TTGTTGTGGCCCTCAATATCTCTCTCTACAAGGTGTCTCTTCTTAGACCTTATTAGACGTGTTTCAGTCTaGATGGAGACCACAATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLWPSISLSTRCLFLDLIRRVSV*METTIR Trigger: CCTTATTGTGGTCTCCATCCAGACTGAAACACGTCT...AATAAGGTCTAAGAAGAGACACCTTGTAGAGAGAGATATTGAGGGCCACAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| CDS-3UTR TCA 90 bp | TTCAATCTTTATAACCACAAGACTAGGTATGCAGTAACAGAATGGGGTGAGGGAGGAACACAAATTCCATaGACAATGAGTGGTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FNLYNHKTRYAVTEWGEGGTQIP*TMSGSS Trigger: GGAAGAACCACTCATTGTTCATGGAATTTGTGTTCC...TCCCTCACCCCATTCTGTTACTGCATACCTAGTCTTGTGGTTATAAAGATTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| CDS-3UTR TCA 90 bp | CATTCAGTTACCTACTTGATCATGATGGATGATGTCTTTGATATGTTCATGGATATGAGGAAAACCATCTaGGTGGCACAGCTCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HSVTYLIMMDDVFDMFMDMRKTI*VAQLSR Trigger: TCTGCTGAGCTGTGCCACTCAGATGGTTTTCCTCAT...ATCCATGAACATATCAAAGACATCATCCATCATGATCAAGTAGGTAACTGAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| CDS-3UTR CCA 90 bp | TTGTTGTGGCCCTCAATATCTCTCTCTACAAGGTGTCTCTTCTTAGACCTTATTCAGACTGAAAGTTGTTaGCCAAAATGTGTGGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: LLWPSISLSTRCLFLDLIQTESC*PKCVVP Trigger: TGGTACCACACATTTTGGCCAACAACTTTCAGTCTG...AATAAGGTCTAAGAAGAGACACCTTGTAGAGAGAGATATTGAGGGCCACAACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| 3UTR CAA 72 bp | AAACGGTACCTGTTGATTGATATTCTGCTATACTCATaGATCAGTGTCTTGCTCAGCCATCATCAGAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: KRYLLIDILLYS*ISVLLSHHQKL Trigger: AAGTTTCTGATGATGGCTGAGCAAGACACTGATCAATGAGTATAGCAGAATATCAATCAACAGGTACCGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| CDS TCA 90 bp | GCAATGGCTAGTGTGGCTGCCATTAGCACAGAGAGCTCATGGATATaGCTTGTGGCACACACGAGACGCATCAGTGGTGGAGCATCACAA | + |
|
Preference number: 5 (lower is better) Translates to: AMASVAAISTESSWI*LVAHTRRISGGASQ Trigger: TTGTGATGCTCCACCACTGATGCGTCTCGTGTGTGCCACAAGTCATATCCATGAGCTCTCTGTGCTAATGGCAGCCACACTAGCCATTGC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080162.2 ENSMUST00000213900.2 |
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| CDS CCA 90 bp | GAGCTCATGGATATGACTTGTGGCACACACGAGACGCATCAGTGGTaGAGCATCACAAAAGAAGTGCTCTATTCCCCTGTCCTGACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: ELMDMTCGTHETHQW*SITKEVLYSPVLTE Trigger: TTCTGTCAGGACAGGGGAATAGAGCACTTCTTTTGTGATGCTCCACCACTGATGCGTCTCGTGTGTGCCACAAGTCATATCCATGAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080162.2 ENSMUST00000213900.2 |
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| CDS CCA 90 bp | AGAGAGCTCATGGATATGACTTGTGGCACACACGAGACGCATCAGTaGTGGAGCATCACAAAAGAAGTGCTCTATTCCCCTGTCCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: RELMDMTCGTHETHQ*WSITKEVLYSPVLT Trigger: TGTCAGGACAGGGGAATAGAGCACTTCTTTTGTGATGCTCCACCACTGATGCGTCTCGTGTGTGCCACAAGTCATATCCATGAGCTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080162.2 ENSMUST00000213900.2 |
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| CDS CCA 90 bp | CTAGTGTGGCTGCCATTAGCACAGAGAGCTCATGGATATGACTTGTaGCACACACGAGACGCATCAGTGGTGGAGCATCACAAAAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LVWLPLAQRAHGYDL*HTRDASVVEHHKRS Trigger: ACTTCTTTTGTGATGCTCCACCACTGATGCGTCTCGTGTGTGCCACAAGTCATATCCATGAGCTCTCTGTGCTAATGGCAGCCACACTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080162.2 ENSMUST00000213900.2 |
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| CDS TCA 90 bp | ATCAGTGGTGGAGCATCACAAAAGAAGTGCTCTATTCCCCTGTCCTaGCAGAATGGTAGACAGAAGATAAAGACCACAAGCTGTAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ISGGASQKKCSIPLS*QNGRQKIKTTSCKD Trigger: GTCCTTACAGCTTGTGGTCTTTATCTTCTGTCTACCATTCTGTCAGGACAGGGGAATAGAGCACTTCTTTTGTGATGCTCCACCACTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080162.2 ENSMUST00000213900.2 |
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| CDS-3UTR CAA 90 bp | ATGATTCTGTTTGTTGTGGCCCTCAATATCTCTCTCTACAAGGTGTCTCTTCTTGGAGACAAACTGATCTaGCTTGGGATGGTAACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: MILFVVALNISLYKVSLLGDKLI*LGMVTG Trigger: TCCAGTTACCATCCCAAGCAAGATCAGTTTGTCTCC...AAGAAGAGACACCTTGTAGAGAGAGATATTGAGGGCCACAACAAACAGAATCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213900.2 |
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| CDS TCA 72 bp | AGAACAAGTGTTGAAGGCCCTGTGACGGCCAGCTGCTaGGTGGAGTTTGAGCACAGCAGCCACTATCAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RTSVEGPVTASC*VEFEHSSHYQG Trigger: GCCTTGATAGTGGCTGCTGTGCTCAAACTCCACTCAGCAGCTGGCCGTCACAGGGCCTTCAACACTTGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080162.2 ENSMUST00000213900.2 |
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| CDS TCA 72 bp | AGTGTGGCTGCCATTAGCACAGAGAGCTCATGGATATaGCTTGTGGCACACACGAGACGCATCAGTGGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SVAAISTESSWI*LVAHTRRISGG Trigger: TCCACCACTGATGCGTCTCGTGTGTGCCACAAGTCATATCCATGAGCTCTCTGTGCTAATGGCAGCCACACT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080162.2 ENSMUST00000213900.2 |
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| CDS CAA 90 bp | GAGGAATGGTGTACCCAGTGTGTATACCAGGGAGACAAACTGATCTaGCTTGGGATGGTAACTGGAGACGGGGCGCAAGTACATGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: EEWCTQCVYQGDKLI*LGMVTGDGAQVHEG Trigger: GCCTTCATGTACTTGCGCCCCGTCTCCAGTTACCATCCCAAGCAAGATCAGTTTGTCTCCCTGGTATACACACTGGGTACACCATTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080162.2 ENSMUST00000213900.2 |
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| CDS CAA 90 bp | TGGCTAGTGTGGCTGCCATTAGCACAGAGAGCTCATGGATATGACTaGTGGCACACACGAGACGCATCAGTGGTGGAGCATCACAAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: WLVWLPLAQRAHGYD*WHTRDASVVEHHKR Trigger: TCTTTTGTGATGCTCCACCACTGATGCGTCTCGTGTGTGCCACAAGTCATATCCATGAGCTCTCTGTGCTAATGGCAGCCACACTAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080162.2 ENSMUST00000213900.2 |
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| CDS CAA 72 bp | TGTACCCAGTGTGTATACCAGGGAGACAAACTGATCTaGCTTGGGATGGTAACTGGAGACGGGGCGCAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: CTQCVYQGDKLI*LGMVTGDGAQV Trigger: TACTTGCGCCCCGTCTCCAGTTACCATCCCAAGCAAGATCAGTTTGTCTCCCTGGTATACACACTGGGTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080162.2 ENSMUST00000213900.2 |
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| CDS CCA 72 bp | GATATGACTTGTGGCACACACGAGACGCATCAGTGGTaGAGCATCACAAAAGAAGTGCTCTATTCCCCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: DMTCGTHETHQW*SITKEVLYSPV Trigger: GACAGGGGAATAGAGCACTTCTTTTGTGATGCTCCACCACTGATGCGTCTCGTGTGTGCCACAAGTCATATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080162.2 ENSMUST00000213900.2 |
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| CDS CCA 72 bp | ATGGATATGACTTGTGGCACACACGAGACGCATCAGTaGTGGAGCATCACAAAAGAAGTGCTCTATTCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: MDMTCGTHETHQ*WSITKEVLYSP Trigger: AGGGGAATAGAGCACTTCTTTTGTGATGCTCCACCACTGATGCGTCTCGTGTGTGCCACAAGTCATATCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080162.2 ENSMUST00000213900.2 |
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| CDS TCA 72 bp | GGAGCATCACAAAAGAAGTGCTCTATTCCCCTGTCCTaGCAGAATGGTAGACAGAAGATAAAGACCACAAGC | + |
|
Preference number: 6 (lower is better) Translates to: GASQKKCSIPLS*QNGRQKIKTTS Trigger: GCTTGTGGTCTTTATCTTCTGTCTACCATTCTGTCAGGACAGGGGAATAGAGCACTTCTTTTGTGATGCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080162.2 ENSMUST00000213900.2 |
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