Pregenerated sensors for OLFR1489 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045678Ensembl transcript IDs: ENSMUST00000053113.5, ENSMUST00000217182.3
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGAGTGAGCTTGAGACAACCAACACTCTCAGTGGACCACACCAGTaGGCAGGGAGAGGAAAAGGTCACCATATTGTCACCATGAGGTCT | + |
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Preference number: 1 (lower is better) Translates to: GSELETTNTLSGPHQ*AGRGKGHHIVTMRS Trigger: AGACCTCATGGTGACAATATGGTGACCTTTTCCTCTCCCTGCCCACTGGTGTGGTCCACTGAGAGTGTTGGTTGTCTCAAGCTCACTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR TCA 90 bp | TGGAGTCCTAGCCTGTGCTACCATCAGGAAACTTGTCTGCATTCATaGCCCTGCAGGAGCACTGGTTTGTTGCCCTTAAAGGTCAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: WSPSLCYHQETCLHS*PCRSTGLLPLKVRQ Trigger: CTGCCTGACCTTTAAGGGCAACAAACCAGTGCTCCTGCAGGGTCATGAATGCAGACAAGTTTCCTGATGGTAGCACAGGCTAGGACTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR GCA 90 bp | GTCTCATATGAGGCTATGCCAGTGCCTGGCAAATACAGAAGTGGATaGTCACAGTCATCTATTGGATGGAACACAGGGCCTCCAATGGAG | + |
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Preference number: 1 (lower is better) Translates to: VSYEAMPVPGKYRSG*SQSSIGWNTGPPME Trigger: CTCCATTGGAGGCCCTGTGTTCCATCCAATAGATGACTGTGAGCATCCACTTCTGTATTTGCCAGGCACTGGCATAGCCTCATATGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR TCA 90 bp | CAGGATATAGAACTTTCAGCTCCTCCACTGCCTTGCCTACCTGGATaGTGCCATGCTTCCCACCATGATGGTAATGTACTGAACCTCAGA | + |
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Preference number: 1 (lower is better) Translates to: QDIELSAPPLPCLPG*CHASHHDGNVLNLR Trigger: TCTGAGGTTCAGTACATTACCATCATGGTGGGAAGCATGGCATCATCCAGGTAGGCAAGGCAGTGGAGGAGCTGAAAGTTCTATATCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR CCA 90 bp | CCTGTTCCCCAACCCACCCACTCCAGATGTCCCTCAACAGAGGAATaGATACAGAAAATGTCGTACATTTACAGAATGGAGTACTACTCA | + |
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Preference number: 1 (lower is better) Translates to: PVPQPTHSRCPSTEE*IQKMSYIYRMEYYS Trigger: TGAGTAGTACTCCATTCTGTAAATGTACGACATTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGGAGTGGGTGGGTTGGGGAACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR TCA 90 bp | TGGAGAAAAACTAATCGTGAGCAACAGCGTAATGTGAGTAGCCAATaGTGCTACTTAGGACCATTGTGGAGTCCTAGCCTGTGCTACCAT | + |
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Preference number: 1 (lower is better) Translates to: WRKTNREQQRNVSSQ*CYLGPLWSPSLCYH Trigger: ATGGTAGCACAGGCTAGGACTCCACAATGGTCCTAAGTAGCATCATTGGCTACTCACATTACGCTGTTGCTCACGATTAGTTTTTCTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR TCA 90 bp | CACCATATTGTCACCATGAGGTCTGGAAAGGTAGTTAGCCTGAAATaGTCCCAGTCTGATGATGCACAGGTCCTAGGAGACAGACTATAT | + |
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Preference number: 1 (lower is better) Translates to: HHIVTMRSGKVVSLK*SQSDDAQVLGDRLY Trigger: ATATAGTCTGTCTCCTAGGACCTGTGCATCATCAGACTGGGATCATTTCAGGCTAACTACCTTTCCAGACCTCATGGTGACAATATGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR CCA 90 bp | ATGGTAGGATTTACAGAGACAAAGTTTGGAGATGAGATGAAAGGATaGACCATCCAGAGACTGCCACACCCAGGGATTCATCCCATAATC | + |
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Preference number: 1 (lower is better) Translates to: MVGFTETKFGDEMKG*TIQRLPHPGIHPII Trigger: GATTATGGGATGAATCCCTGGGTGTGGCAGTCTCTGGATGGTCCATCCTTTCATCTCATCTCCAAACTTTGTCTCTGTAAATCCTACCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR TCA 90 bp | TTGTTGACTGGTCTTACTGTCTCTGACTGGAGCTTGTATTTCCTGTaGGGCTGTGAACCTACAATGTTATGTTTGTCACAACTCCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: LLTGLTVSDWSLYFL*GCEPTMLCLSQLLG Trigger: TCCCAGGAGTTGTGACAAACATAACATTGTAGGTTCACAGCCTCACAGGAAATACAAGCTCCAGTCAGAGACAGTAAGACCAGTCAACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR TCA 90 bp | GAACAAAATACTCATGGTAGGATTTACAGAGACAAAGTTTGGAGATaGGATGAAAGGATGGACCATCCAGAGACTGCCACACCCAGGGAT | + |
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Preference number: 1 (lower is better) Translates to: EQNTHGRIYRDKVWR*DERMDHPETATPRD Trigger: ATCCCTGGGTGTGGCAGTCTCTGGATGGTCCATCCTTTCATCTCATCTCCAAACTTTGTCTCTGTAAATCCTACCATGAGTATTTTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR CCA 90 bp | TTTCCATATCTGCTCTTGAGTTTTCTGCATCTCCCTGCTTCTCCCTaGATCACTCCTATTCCTGGAAGTTGTTCTAGTATTTCTTGCCCT | + |
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Preference number: 1 (lower is better) Translates to: FPYLLLSFLHLPASP*ITPIPGSCSSISCP Trigger: AGGGCAAGAAATACTAGAACAACTTCCAGGAATAGGAGTGATCCAGGGAGAAGCAGGGAGATGCAGAAAACTCAAGAGCAGATATGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR GCA 90 bp | TCTCCCTGGATCACTCCTATTCCTGGAAGTTGTTCTAGTATTTCTTaGCCTACAACCGATCTTTGTTACAACCAACTAGCAGCAAGACAA | + |
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Preference number: 1 (lower is better) Translates to: SPWITPIPGSCSSIS*PTTDLCYNQLAARQ Trigger: TTGTCTTGCTGCTAGTTGGTTGTAACAAAGATCGGTTGTAGGGCAAGAAATACTAGAACAACTTCCAGGAATAGGAGTGATCCAGGGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR TCA 90 bp | GCATGGGTGACACCAAAGAAACAATTATGTCAAAGTCTGTCTTCCTaGTCTGACCAGTTTGGTGGTGGCTGTGAATTACATGAGTATAGT | + |
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Preference number: 1 (lower is better) Translates to: AWVTPKKQLCQSLSS*SDQFGGGCELHEYS Trigger: ACTATACTCATGTAATTCACAGCCACCACCAAACTGGTCAGATCAGGAAGACAGACTTTGACATAATTGTTTCTTTGGTGTCACCCATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR TCA 90 bp | TTAGTTTCTTTTGCTTTCCTCTTGCCATCTGGTTATCTCTGTTGTTaGCTGGTCTTACTGTCTCTGACTGGAGCTTGTATTTCCTGTGAG | + |
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Preference number: 1 (lower is better) Translates to: LVSFAFLLPSGYLCC*LVLLSLTGACISCE Trigger: CTCACAGGAAATACAAGCTCCAGTCAGAGACAGTAAGACCAGTCAACAACAGAGATAACCAGATGGCAAGAGGAAAGCAAAAGAAACTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR GCA 90 bp | ATAGGCTCACATGAGACAGCTATCAGGGTCCTTTCAGCAAAATCTTaGTGGCATATGCTGGAGTACTATTCAGCTATTAAAAACAACGAA | + |
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Preference number: 1 (lower is better) Translates to: IGSHETAIRVLSAKS*WHMLEYYSAIKNNE Trigger: TTCGTTGTTTTTAATAGCTGAATAGTACTCCAGCATATGCCAGCAAGATTTTGCTGAAAGGACCCTGATAGCTGTCTCATGTGAGCCTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR CCA 90 bp | GGCTCACATGAGACAGCTATCAGGGTCCTTTCAGCAAAATCTTGCTaGCATATGCTGGAGTACTATTCAGCTATTAAAAACAACGAATTT | + |
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Preference number: 1 (lower is better) Translates to: GSHETAIRVLSAKSC*HMLEYYSAIKNNEF Trigger: AAATTCGTTGTTTTTAATAGCTGAATAGTACTCCAGCATATGCCAGCAAGATTTTGCTGAAAGGACCCTGATAGCTGTCTCATGTGAGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR CCA 90 bp | GTACTTTGTAAGAATGGCTTTGGTCATGGTGTCTTTTCACAGCAATaGAAACCCAAACTAAGACAGACAGTTTCCCAGCTACTGTTTATA | + |
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Preference number: 1 (lower is better) Translates to: VLCKNGFGHGVFSQQ*KPKLRQTVSQLLFI Trigger: TATAAACAGTAGCTGGGAAACTGTCTGTCTTAGTTTGGGTTTCCATTGCTGTGAAAAGACACCATGACCAAAGCCATTCTTACAAAGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR TCA 90 bp | CTGAGATACTGTCTGTCTTTGTCACTGAAATTTACTTCCTGTATGTaGCAAAATGCTGTGTCCTGTTTATATAGACAGTCTGTTAGTCTA | + |
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Preference number: 1 (lower is better) Translates to: LRYCLSLSLKFTSCM*QNAVSCLYRQSVSL Trigger: TAGACTAACAGACTGTCTATATAAACAGGACACAGCATTTTGTCACATACAGGAAGTAAATTTCAGTGACAAAGACAGACAGTATCTCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR-3UTR CCA 90 bp | ACAAGGTTAGCTCTGACACCAGAGATGGGCTTTGAGAGACCTTCATCCTATCTGAACCAACACTCTCAGTaGACCACACCAGTGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: TRLALTPEMGFERPSSYLNQHSQ*TTPVGR Trigger: CCTGCCCACTGGTGTGGTCCACTGAGAGTGTTGGTT...CAGATAGGATGAAGGTCTCTCAAAGCCCATCTCTGGTGTCAGAGCTAACCTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR-3UTR TCA 90 bp | CTTAGGGTATGTATGACAACTGCTCAGGATCTTCTGACTTATAGAGTCTCTGGTGAAGATCATAGGTTGTaGGCAGGGGGCGGGGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: LRVCMTTAQDLLTYRVSGEDHRL*AGGGVE Trigger: CTCCACCCCGCCCCCTGCTCACAACCTATGATCTTC...ACCAGAGACTCTATAAGTCAGAAGATCCTGAGCAGTTGTCATACATACCCTAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR-3UTR GCA 90 bp | AATGGGTTGCAGAGAGCTGAGATCTTAGGTGTGTCAGCACTTCTGGGAGACCAGTGGAGTCCTAGCCTGTaGTACCATCAGGAAACTTGT | + |
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Preference number: 2 (lower is better) Translates to: NGLQRAEILGVSALLGDQWSPSL*YHQETC Trigger: ACAAGTTTCCTGATGGTAGCACAGGCTAGGACTCCA...CTGGTCTCCCAGAAGTGCTGACACACCTAAGATCTCAGCTCTCTGCAACCCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR-3UTR GCA 90 bp | CTTCATTTACATTTCAAATGCTATCCTGAAAGTCCACTATACCCTGCCCCTGCCCCTATACCCTCTCCATaGCCTGTTCCCCTACCCACC | + |
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Preference number: 2 (lower is better) Translates to: LHLHFKCYPESPLYPAPAPIPSP*PVPLPT Trigger: GGTGGGTAGGGGAACAGGGCATGGAGAGGGTATAGG...GGCAGGGGCAGGGTATAGTGGACTTTCAGGATAGCATTTGAAATGTAAATGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR CAA 90 bp | GGGGACCCTGTGTTCCATCCAATAGATGACTGTGAGCATCCACTTTaGTATTTGGAAGGCACTGGCATAGGCTCACATGAGACAGCTATC | + |
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Preference number: 2 (lower is better) Translates to: GDPVFHPIDDCEHPL*YLEGTGIGSHETAI Trigger: GATAGCTGTCTCATGTGAGCCTATGCCAGTGCCTTCCAAATACAAAAGTGGATGCTCACAGTCATCTATTGGATGGAACACAGGGTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR-3UTR TCA 90 bp | AATGGGTTGCAGAGAGCTGAGATCTTAGGTGTGTCAGCACTTCTGGGAGACCAGCTCTGTTGCTTTCTTTaGGTGGGTTGTGTGATCAGT | + |
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Preference number: 2 (lower is better) Translates to: NGLQRAEILGVSALLGDQLCCFL*VGCVIS Trigger: ACTGATCACACAACCCACTCAAAGAAAGCAACAGAG...CTGGTCTCCCAGAAGTGCTGACACACCTAAGATCTCAGCTCTCTGCAACCCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR-3UTR CCA 90 bp | ACAAGGTTAGCTCTGACACCAGAGATGGGCTTTGAGAGACCTTCATCCTATCTGACCCTGCAGGAGCACTaGTTTGTTGCCCTTAAAGGT | + |
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Preference number: 2 (lower is better) Translates to: TRLALTPEMGFERPSSYLTLQEH*FVALKG Trigger: ACCTTTAAGGGCAACAAACCAGTGCTCCTGCAGGGT...CAGATAGGATGAAGGTCTCTCAAAGCCCATCTCTGGTGTCAGAGCTAACCTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR-3UTR TCA 90 bp | CTTCATTTACATTTCAAATGCTATCCTGAAAGTCCACTATACCCTGCCCCTGCCACTTGTCTGCATTCATaGCCCTGCAGGAGCACTGGT | + |
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Preference number: 2 (lower is better) Translates to: LHLHFKCYPESPLYPAPATCLHS*PCRSTG Trigger: ACCAGTGCTCCTGCAGGGTCATGAATGCAGACAAGT...GGCAGGGGCAGGGTATAGTGGACTTTCAGGATAGCATTTGAAATGTAAATGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR-3UTR TCA 90 bp | GTGAACCTACAATGTTATGTTTGTCACAACTCCTGGGAACCAGCTCTCTTAGGGAGGTTATGGGGGCAATaGAGAGAGGCAGAAATGGAG | + |
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Preference number: 2 (lower is better) Translates to: VNLQCYVCHNSWEPALLGRLWGQ*REAEME Trigger: CTCCATTTCTGCCTCTCTTCATTGCCCCCATAACCT...CCCTAAGAGAGCTGGTTCCCAGGAGTTGTGACAAACATAACATTGTAGGTTCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR-3UTR TCA 90 bp | ACAAGGTTAGCTCTGACACCAGAGATGGGCTTTGAGAGACCTTCATCCTATCTGAGTTTGGAGCTAAGGTaGAAGGATGGAGCATCCAGA | + |
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Preference number: 2 (lower is better) Translates to: TRLALTPEMGFERPSSYLSLELR*KDGASR Trigger: TCTGGATGCTCCATCCTTTCACCTTAGCTCCAAACT...CAGATAGGATGAAGGTCTCTCAAAGCCCATCTCTGGTGTCAGAGCTAACCTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR-3UTR GCA 90 bp | ACAAGGTTAGCTCTGACACCAGAGATGGGCTTTGAGAGACCTTCATCCTATCTGTCTCTTGAGAGGCTATaGCAGTGCCTGGCAAATACA | + |
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Preference number: 2 (lower is better) Translates to: TRLALTPEMGFERPSSYLSLERL*QCLANT Trigger: TGTATTTGCCAGGCACTGGCATAGCCTCTCAAGAGA...CAGATAGGATGAAGGTCTCTCAAAGCCCATCTCTGGTGTCAGAGCTAACCTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR-3UTR GCA 90 bp | AATGGGTTGCAGAGAGCTGAGATCTTAGGTGTGTCAGCACTTCTGGGAGACCAGCTTTCAGCAAAATCTTaGTGGCATATGCTGGAGTAC | + |
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Preference number: 2 (lower is better) Translates to: NGLQRAEILGVSALLGDQLSAKS*WHMLEY Trigger: GTACTCCAGCATATGCCAGCAAGATTTTGCTGAAAG...CTGGTCTCCCAGAAGTGCTGACACACCTAAGATCTCAGCTCTCTGCAACCCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR-3UTR GCA 90 bp | AATGGGTTGCAGAGAGCTGAGATCTTAGGTGTGTCAGCACTTCTGGGAGACCAGAAAGCATATAAAGTTTaGAAGACCAAGGGCCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: NGLQRAEILGVSALLGDQKAYKV*KTKGLP Trigger: AGGCAGGCCCTTGGTCTTGCAAACTTTATATGCTTT...CTGGTCTCCCAGAAGTGCTGACACACCTAAGATCTCAGCTCTCTGCAACCCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR-3UTR GCA 90 bp | GTGAACCTACAATGTTATGTTTGTCACAACTCCTGGGAACCAGCTCTCTTAGGGTTTTCTGCATCTCCCTaGTTCTCCCTGGATCACTCC | + |
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Preference number: 2 (lower is better) Translates to: VNLQCYVCHNSWEPALLGFSASP*FSLDHS Trigger: GGAGTGATCCAGGGAGAAGCAGGGAGATGCAGAAAA...CCCTAAGAGAGCTGGTTCCCAGGAGTTGTGACAAACATAACATTGTAGGTTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR-3UTR GCA 90 bp | CTTAGGGTATGTATGACAACTGCTCAGGATCTTCTGACTTATAGAGTCTCTGGTGTGGCATCCAGGGCTTaGTGTGGTAGGAGAACTGCA | + |
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Preference number: 2 (lower is better) Translates to: LRVCMTTAQDLLTYRVSGVASRA*CGRRTA Trigger: TGCAGTTCTCCTACCACAGCAAGCCCTGGATGCCAC...ACCAGAGACTCTATAAGTCAGAAGATCCTGAGCAGTTGTCATACATACCCTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR-3UTR CCA 90 bp | GTGAACCTACAATGTTATGTTTGTCACAACTCCTGGGAACCAGCTCTCTTAGGGGCTAAGGTGAAAGGATaGAGCATCCAGAGACTACCC | + |
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Preference number: 2 (lower is better) Translates to: VNLQCYVCHNSWEPALLGAKVKG*SIQRLP Trigger: GGGTAGTCTCTGGATGCTCCATCCTTTCACCTTAGC...CCCTAAGAGAGCTGGTTCCCAGGAGTTGTGACAAACATAACATTGTAGGTTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR-3UTR TCA 90 bp | AATGGGTTGCAGAGAGCTGAGATCTTAGGTGTGTCAGCACTTCTGGGAGACCAGAGCAGTTTCCAAATCTaGAGAAATGACAGAGAATCC | + |
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Preference number: 2 (lower is better) Translates to: NGLQRAEILGVSALLGDQSSFQI*RNDRES Trigger: GGATTCTCTGTCATTTCTTCAGATTTGGAAACTGCT...CTGGTCTCCCAGAAGTGCTGACACACCTAAGATCTCAGCTCTCTGCAACCCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR-3UTR CCA 90 bp | TCATTCCTCCTTAGAATGGGGAACAAAATAGCCATGGAAGGAGATACAGAGAAAAGTGGACCACACCAGTaGGCAGGGAGAGGAAAAGGT | + |
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Preference number: 2 (lower is better) Translates to: SFLLRMGNKIAMEGDTEKSGPHQ*AGRGKG Trigger: ACCTTTTCCTCTCCCTGCCCACTGGTGTGGTCCACT...TTTCTCTGTATCTCCTTCCATGGCTATTTTGTTCCCCATTCTAAGGAGGAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR-3UTR CCA 90 bp | GTGAACCTACAATGTTATGTTTGTCACAACTCCTGGGAACCAGCTCTCTTAGGGCTAATTAGCCATCAGTaGGAGGAGAAACCCTTGGTC | + |
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Preference number: 2 (lower is better) Translates to: VNLQCYVCHNSWEPALLGLISHQ*EEKPLV Trigger: GACCAAGGGTTTCTCCTCCCACTGATGGCTAATTAG...CCCTAAGAGAGCTGGTTCCCAGGAGTTGTGACAAACATAACATTGTAGGTTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR-3UTR TCA 90 bp | CTTAGGGTATGTATGACAACTGCTCAGGATCTTCTGACTTATAGAGTCTCTGGTTGCATAGCTATCTCTTaGGAGGCTATGCCAGTGCCT | + |
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Preference number: 2 (lower is better) Translates to: LRVCMTTAQDLLTYRVSGCIAIS*EAMPVP Trigger: AGGCACTGGCATAGCCTCTCAAGAGATAGCTATGCA...ACCAGAGACTCTATAAGTCAGAAGATCCTGAGCAGTTGTCATACATACCCTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR-3UTR GCA 90 bp | CTTCATTTACATTTCAAATGCTATCCTGAAAGTCCACTATACCCTGCCCCTGCCTACCTACCTATGTCTTaGCATCACCACAGCTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: LHLHFKCYPESPLYPAPAYLPMS*HHHSSC Trigger: GCAAGAGCTGTGGTGATGGCAAGACATAGGTAGGTA...GGCAGGGGCAGGGTATAGTGGACTTTCAGGATAGCATTTGAAATGTAAATGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR-3UTR CCA 90 bp | ACAAGGTTAGCTCTGACACCAGAGATGGGCTTTGAGAGACCTTCATCCTATCTGGAATGGCTTTGGTCATaGTGTCTTTTCACAGCAATG | + |
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Preference number: 2 (lower is better) Translates to: TRLALTPEMGFERPSSYLEWLWS*CLFTAM Trigger: CATTGCTGTGAAAAGACACCATGACCAAAGCCATTC...CAGATAGGATGAAGGTCTCTCAAAGCCCATCTCTGGTGTCAGAGCTAACCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR CAA 90 bp | CATTCGGGGATCCATCCCATAATCATTCACCAAACACAAACACTATaGCATAGCTATCTCTTGAGAGGCTATGCCAGTGCCTGGCAAATA | + |
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Preference number: 2 (lower is better) Translates to: HSGIHPIIIHQTQTL*HSYLLRGYASAWQI Trigger: TATTTGCCAGGCACTGGCATAGCCTCTCAAGAGATAGCTATGCAATAGTGTTTGTGTTTGGTGAATGATTATGGGATGGATCCCCGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR CAA 90 bp | GAGAATCCTGGCCACTTAGGTATTCACCAGTATTCTTCTTTGTTGTaGGGGCATCCACCTTTAGCTGCTAGTCCCAGAATATCTGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: ENPGHLGIHQYSSLL*GHPPLAASPRISER Trigger: TCTTTCAGATATTCTGGGACTAGCAGCTAAAGGTGGATGCCCCAACAACAAAGAAGAATACTGGTGAATACCTAAGTGGCCAGGATTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR-3UTR TCA 90 bp | CTTAGGGTATGTATGACAACTGCTCAGGATCTTCTGACTTATAGAGTCTCTGGTAGAAGCATGTGTGCATaGAAGCCCATACTTCATGGG | + |
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Preference number: 2 (lower is better) Translates to: LRVCMTTAQDLLTYRVSGRSMCA*KPILHG Trigger: CCCATGAAGTATGGGCTTTCATGCACACATGCTTCT...ACCAGAGACTCTATAAGTCAGAAGATCCTGAGCAGTTGTCATACATACCCTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR-3UTR TCA 90 bp | GTGAACCTACAATGTTATGTTTGTCACAACTCCTGGGAACCAGCTCTCTTAGGGAATGTGAGTAGCCAATaGTGCTACTTAGGACCATTG | + |
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Preference number: 2 (lower is better) Translates to: VNLQCYVCHNSWEPALLGNVSSQ*CYLGPL Trigger: CAATGGTCCTAAGTAGCATCATTGGCTACTCACATT...CCCTAAGAGAGCTGGTTCCCAGGAGTTGTGACAAACATAACATTGTAGGTTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR-3UTR CCA 90 bp | AATGGGTTGCAGAGAGCTGAGATCTTAGGTGTGTCAGCACTTCTGGGAGACCAGACTAAAGTTTTAGTTTaGCTAAGGCAATTTTCGGTC | + |
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Preference number: 2 (lower is better) Translates to: NGLQRAEILGVSALLGDQTKVLV*LRQFSV Trigger: GACCGAAAATTGCCTTAGCCAAACTAAAACTTTAGT...CTGGTCTCCCAGAAGTGCTGACACACCTAAGATCTCAGCTCTCTGCAACCCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR-3UTR CCA 90 bp | GTGAACCTACAATGTTATGTTTGTCACAACTCCTGGGAACCAGCTCTCTTAGGGCCCTCAACAGAGGAATaGATACAGAAAATGTCGTAC | + |
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Preference number: 2 (lower is better) Translates to: VNLQCYVCHNSWEPALLGPSTEE*IQKMSY Trigger: GTACGACATTTTCTGTATCCATTCCTCTGTTGAGGG...CCCTAAGAGAGCTGGTTCCCAGGAGTTGTGACAAACATAACATTGTAGGTTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR-3UTR CCA 90 bp | ACAAGGTTAGCTCTGACACCAGAGATGGGCTTTGAGAGACCTTCATCCTATCTGGTCTTTTCACAGCAATaGAAACCCAAACTAAGACAG | + |
|
Preference number: 2 (lower is better) Translates to: TRLALTPEMGFERPSSYLVFSQQ*KPKLRQ Trigger: CTGTCTTAGTTTGGGTTTCCATTGCTGTGAAAAGAC...CAGATAGGATGAAGGTCTCTCAAAGCCCATCTCTGGTGTCAGAGCTAACCTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR TCA 90 bp | GTGAACCTACAATGTTATGTTTGTCACAACTCCTGGGAACCAGCTCTCTTAGGGTCTCTTCATGGCTGCTaGCTAGCATTGAATTTATCA | + |
|
Preference number: 2 (lower is better) Translates to: VNLQCYVCHNSWEPALLGSLHGC*LALNLS Trigger: TGATAAATTCAATGCTAGTCAGCAGCCATGAAGAGA...CCCTAAGAGAGCTGGTTCCCAGGAGTTGTGACAAACATAACATTGTAGGTTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR TCA 90 bp | ACAAGGTTAGCTCTGACACCAGAGATGGGCTTTGAGAGACCTTCATCCTATCTGATCAATAGCTACATTTaGAATTGTTCCTCCCCCTTA | + |
|
Preference number: 2 (lower is better) Translates to: TRLALTPEMGFERPSSYLINSYI*NCSSPL Trigger: TAAGGGGGAGGAACAATTTCAAATGTAGCTATTGAT...CAGATAGGATGAAGGTCTCTCAAAGCCCATCTCTGGTGTCAGAGCTAACCTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR TCA 90 bp | CTTAGGGTATGTATGACAACTGCTCAGGATCTTCTGACTTATAGAGTCTCTGGTTGGTCTTACTGTCTCTaGCTGGAGCTTGTATTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: LRVCMTTAQDLLTYRVSGWSYCL*LELVFP Trigger: AGGAAATACAAGCTCCAGTCAGAGACAGTAAGACCA...ACCAGAGACTCTATAAGTCAGAAGATCCTGAGCAGTTGTCATACATACCCTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTAGGGTATGTATGACAACTGCTCAGGATCTTCTGACTTATAGAGTCTCTGGTAACACAGACAGGGCATaGGTGACACCAAAGAAACAA | + |
|
Preference number: 2 (lower is better) Translates to: LRVCMTTAQDLLTYRVSGNTDRA*VTPKKQ Trigger: TTGTTTCTTTGGTGTCACCCATGCCCTGTCTGTGTT...ACCAGAGACTCTATAAGTCAGAAGATCCTGAGCAGTTGTCATACATACCCTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR CCA 90 bp | TCATTCCTCCTTAGAATGGGGAACAAAATAGCCATGGAAGGAGATACAGAGAAAAGGACAGGGAGTAAGTaGAGGCTAGAAGAACCATAC | + |
|
Preference number: 2 (lower is better) Translates to: SFLLRMGNKIAMEGDTEKRTGSK*RLEEPY Trigger: GTATGGTTCTTCTAGCCTCCACTTACTCCCTGTCCT...TTTCTCTGTATCTCCTTCCATGGCTATTTTGTTCCCCATTCTAAGGAGGAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR CCA 90 bp | ACAAGGTTAGCTCTGACACCAGAGATGGGCTTTGAGAGACCTTCATCCTATCTGTGGCAAATACAGAAGTaGATAGTCACAGTCATCTAT | + |
|
Preference number: 2 (lower is better) Translates to: TRLALTPEMGFERPSSYLWQIQK*IVTVIY Trigger: ATAGATGACTGTGACTATCCACTTCTGTATTTGCCA...CAGATAGGATGAAGGTCTCTCAAAGCCCATCTCTGGTGTCAGAGCTAACCTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR CCA 90 bp | GTGAACCTACAATGTTATGTTTGTCACAACTCCTGGGAACCAGCTCTCTTAGGGTCAGCAAAATCTTGCTaGCATATGCTGGAGTACTAT | + |
|
Preference number: 2 (lower is better) Translates to: VNLQCYVCHNSWEPALLGSAKSC*HMLEYY Trigger: ATAGTACTCCAGCATATGCCAGCAAGATTTTGCTGA...CCCTAAGAGAGCTGGTTCCCAGGAGTTGTGACAAACATAACATTGTAGGTTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR CCA 90 bp | GTGAACCTACAATGTTATGTTTGTCACAACTCCTGGGAACCAGCTCTCTTAGGGTGTTCCTTCTTAGAATaGGGAACAAAATACCCATGG | + |
|
Preference number: 2 (lower is better) Translates to: VNLQCYVCHNSWEPALLGCSFLE*GTKYPW Trigger: CCATGGGTATTTTGTTCCCCATTCTAAGAAGGAACA...CCCTAAGAGAGCTGGTTCCCAGGAGTTGTGACAAACATAACATTGTAGGTTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR CAA 90 bp | TTGCTTAGTTTCTTTTGCTTTCCTCTTGCCATCTGGTTATCTCTGTaGTTGACTGGTCTTACTGTCTCTGACTGGAGCTTGTATTTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: LLSFFCFPLAIWLSL*LTGLTVSDWSLYFL Trigger: CAGGAAATACAAGCTCCAGTCAGAGACAGTAAGACCAGTCAACAACAGAGATAACCAGATGGCAAGAGGAAAGCAAAAGAAACTAAGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR TCA 90 bp | TCATTCCTCCTTAGAATGGGGAACAAAATAGCCATGGAAGGAGATACAGAGAAACAGACAGGGCATGGGTaGCACCAAAGAAACAATTAT | + |
|
Preference number: 2 (lower is better) Translates to: SFLLRMGNKIAMEGDTEKQTGHG*HQRNNY Trigger: ATAATTGTTTCTTTGGTGTCACCCATGCCCTGTCTG...TTTCTCTGTATCTCCTTCCATGGCTATTTTGTTCCCCATTCTAAGGAGGAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTCATTTACATTTCAAATGCTATCCTGAAAGTCCACTATACCCTGCCCCTGCCTACCTTATCTCTTCATaGCTGCTGACTAGCATTGAA | + |
|
Preference number: 2 (lower is better) Translates to: LHLHFKCYPESPLYPAPAYLISS*LLTSIE Trigger: TTCAATGCTAGTCAGCAGCCATGAAGAGATAAGGTA...GGCAGGGGCAGGGTATAGTGGACTTTCAGGATAGCATTTGAAATGTAAATGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR CCA 90 bp | ACAAGGTTAGCTCTGACACCAGAGATGGGCTTTGAGAGACCTTCATCCTATCTGCCTGGAACCATACATTaGAAATATAAAGCATCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: TRLALTPEMGFERPSSYLPGTIH*KYKASF Trigger: GAAAGATGCTTTATATTTCCAATGTATGGTTCCAGG...CAGATAGGATGAAGGTCTCTCAAAGCCCATCTCTGGTGTCAGAGCTAACCTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR TCA 90 bp | TTGCAAAATACAAGAAAATCAAGAAGGAAGACCAACTTGTGGATACTTCATTCCAGACCACTCAAGAAATaGCCCCAGACACTCAGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: LQNTRKSRRKTNLWILHSRPLKK*PQTLRD Trigger: GTCTCTGAGTGTCTGGGGTCATTTCTTGAGTGGTCT...GGAATGAAGTATCCACAAGTTGGTCTTCCTTCTTGATTTTCTTGTATTTTGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR TCA 90 bp | TCATTCCTCCTTAGAATGGGGAACAAAATAGCCATGGAAGGAGATACAGAGAAATTACCACAGGAGCCTTaGTGTAATTCCCACCTTATT | + |
|
Preference number: 2 (lower is better) Translates to: SFLLRMGNKIAMEGDTEKLPQEP*CNSHLI Trigger: AATAAGGTGGGAATTACATCAAGGCTCCTGTGGTAA...TTTCTCTGTATCTCCTTCCATGGCTATTTTGTTCCCCATTCTAAGGAGGAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR TCA 90 bp | CTTCATTTACATTTCAAATGCTATCCTGAAAGTCCACTATACCCTGCCCCTGCCTTGATATGTATTCACTaGTACGTGGATAATAGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: LHLHFKCYPESPLYPAPALICIH*YVDNSP Trigger: TGGGCTATTATCCACGTATCAGTGAATACATATCAA...GGCAGGGGCAGGGTATAGTGGACTTTCAGGATAGCATTTGAAATGTAAATGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR TCA 90 bp | CTTCATTTACATTTCAAATGCTATCCTGAAAGTCCACTATACCCTGCCCCTGCCAATTTGCAAAACACATaGAAATCCAGAAGGAAGACC | + |
|
Preference number: 2 (lower is better) Translates to: LHLHFKCYPESPLYPAPANLQNT*KSRRKT Trigger: GGTCTTCCTTCTGGATTTTCATGTGTTTTGCAAATT...GGCAGGGGCAGGGTATAGTGGACTTTCAGGATAGCATTTGAAATGTAAATGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR GCA 90 bp | CTTCATTTACATTTCAAATGCTATCCTGAAAGTCCACTATACCCTGCCCCTGCCGATCATATCTCTCTTTaGAACATAATTCACTCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: LHLHFKCYPESPLYPAPADHISL*NIIHSS Trigger: GCTGGAGTGAATTATGTTGCAAAGAGAGATATGATC...GGCAGGGGCAGGGTATAGTGGACTTTCAGGATAGCATTTGAAATGTAAATGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR GCA 90 bp | CTTAGGGTATGTATGACAACTGCTCAGGATCTTCTGACTTATAGAGTCTCTGGTAATCTTGCTGGCATATaGTGGAGTACTATTCAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: LRVCMTTAQDLLTYRVSGNLAGI*WSTIQL Trigger: TAGCTGAATAGTACTCCAGCATATGCCAGCAAGATT...ACCAGAGACTCTATAAGTCAGAAGATCCTGAGCAGTTGTCATACATACCCTAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR GCA 90 bp | GTGAACCTACAATGTTATGTTTGTCACAACTCCTGGGAACCAGCTCTCTTAGGGTTCTTACCTTGTCTCTaGAAAATGAGGCAATTGATT | + |
|
Preference number: 2 (lower is better) Translates to: VNLQCYVCHNSWEPALLGFLPCL*KMRQLI Trigger: AATCAATTGCCTCATTTTGCAGAGACAAGGTAAGAA...CCCTAAGAGAGCTGGTTCCCAGGAGTTGTGACAAACATAACATTGTAGGTTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR-3UTR CCA 90 bp | CTTAGGGTATGTATGACAACTGCTCAGGATCTTCTGACTTATAGAGTCTCTGGTATATTCTCAGGCAAATaGATGGATCTGGAGGATATC | + |
|
Preference number: 2 (lower is better) Translates to: LRVCMTTAQDLLTYRVSGIFSGK*MDLEDI Trigger: GATATCCTCCAGATCCATCCATTTGCCTGAGAATAT...ACCAGAGACTCTATAAGTCAGAAGATCCTGAGCAGTTGTCATACATACCCTAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR GCA 90 bp | CTTAGGGTATGTATGACAACTGCTCAGGATCTTCTGACTTATAGAGTCTCTGGTCATGTACATTTCAAATaGTATCCCAAAATCCCCCTA | + |
|
Preference number: 2 (lower is better) Translates to: LRVCMTTAQDLLTYRVSGHVHFK*YPKIPL Trigger: TAGGGGGATTTTGGGATAGCATTTGAAATGTACATG...ACCAGAGACTCTATAAGTCAGAAGATCCTGAGCAGTTGTCATACATACCCTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTCATTTACATTTCAAATGCTATCCTGAAAGTCCACTATACCCTGCCCCTGCCTTGACTTTAGCATCTTaGGCATTATTCTTTTCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: LHLHFKCYPESPLYPAPALTLAS*ALFFSL Trigger: CAGAGAAAAGAATAATGCCCAAGATGCTAAAGTCAA...GGCAGGGGCAGGGTATAGTGGACTTTCAGGATAGCATTTGAAATGTAAATGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTCATTTACATTTCAAATGCTATCCTGAAAGTCCACTATACCCTGCCCCTGCCGAACTCTGGGGTTACTaGTTAGTTTATATTGTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: LHLHFKCYPESPLYPAPAELWGY*LVYIVV Trigger: AACAACAATATAAACTAACCAGTAACCCCAGAGTTC...GGCAGGGGCAGGGTATAGTGGACTTTCAGGATAGCATTTGAAATGTAAATGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR CAA 90 bp | TTTTCCATCCCACATTTAAAGCAAATACCAGGTGGAGATTCTTCATaGTCTAACATCTTTTTATATGCAGACTGGAGGTACAACCAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: FSIPHLKQIPGGDSS*SNIFLYADWRYNQQ Trigger: CTGCTGGTTGTACCTCCAGTCTGCATATAAAAAGATGTTAGACAATGAAGAATCTCCACCTGGTATTTGCTTTAAATGTGGGATGGAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR GCA 90 bp | CTTAGGGTATGTATGACAACTGCTCAGGATCTTCTGACTTATAGAGTCTCTGGTACACATATTTTATGGTaGAATGTGAGTTTGGGGATT | + |
|
Preference number: 2 (lower is better) Translates to: LRVCMTTAQDLLTYRVSGTHILW*NVSLGI Trigger: AATCCCCAAACTCACATTGCACCATAAAATATGTGT...ACCAGAGACTCTATAAGTCAGAAGATCCTGAGCAGTTGTCATACATACCCTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR-3UTR CCA 90 bp | TCATTCCTCCTTAGAATGGGGAACAAAATAGCCATGGAAGGAGATACAGAGAAATATAGTTCTCCCTCATaGTTTTCCCCTATATGCATT | + |
|
Preference number: 2 (lower is better) Translates to: SFLLRMGNKIAMEGDTEKYSSPS*FSPICI Trigger: AATGCATATAGGGGAAAACCATGAGGGAGAACTATA...TTTCTCTGTATCTCCTTCCATGGCTATTTTGTTCCCCATTCTAAGGAGGAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR-3UTR CCA 90 bp | CTTAGGGTATGTATGACAACTGCTCAGGATCTTCTGACTTATAGAGTCTCTGGTTGTATTAGGCAACCTTaGAGAAAGTATTCCAATATC | + |
|
Preference number: 2 (lower is better) Translates to: LRVCMTTAQDLLTYRVSGCIRQP*RKYSNI Trigger: GATATTGGAATACTTTCTCCAAGGTTGCCTAATACA...ACCAGAGACTCTATAAGTCAGAAGATCCTGAGCAGTTGTCATACATACCCTAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR CCA 72 bp | CTTGAGACAACCAACACTCTCAGTGGACCACACCAGTaGGCAGGGAGAGGAAAAGGTCACCATATTGTCACC | + |
|
Preference number: 3 (lower is better) Translates to: LETTNTLSGPHQ*AGRGKGHHIVT Trigger: GGTGACAATATGGTGACCTTTTCCTCTCCCTGCCCACTGGTGTGGTCCACTGAGAGTGTTGGTTGTCTCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR CAA 90 bp | ACAAGGTTAGCTCTGACACCAGAGATGGGCTTTGAGAGACCTTCATCCTATCTGAGCTCCTCCACTGCCTaGCCTACCTGGATGATGCCA | + |
|
Preference number: 3 (lower is better) Translates to: TRLALTPEMGFERPSSYLSSSTA*PTWMMP Trigger: TGGCATCATCCAGGTAGGCAAGGCAGTGGAGGAGCT...CAGATAGGATGAAGGTCTCTCAAAGCCCATCTCTGGTGTCAGAGCTAACCTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR TCA 72 bp | GAACTTTCAGCTCCTCCACTGCCTTGCCTACCTGGATaGTGCCATGCTTCCCACCATGATGGTAATGTACTG | + |
|
Preference number: 3 (lower is better) Translates to: ELSAPPLPCLPG*CHASHHDGNVL Trigger: CAGTACATTACCATCATGGTGGGAAGCATGGCATCATCCAGGTAGGCAAGGCAGTGGAGGAGCTGAAAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR GCA 72 bp | TGGGAAGAGAGGCCCCTTGGTCTTGCAAACTTTATATaGCCCATTACAGGGAAATGCCAGGGCCAAGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: WEERPLGLANFI*PITGKCQGQEV Trigger: CACTTCTTGGCCCTGGCATTTCCCTGTAATGGGGCATATAAAGTTTGCAAGACCAAGGGGCCTCTCTTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR TCA 72 bp | GTCACCATGAGGTCTGGAAAGGTAGTTAGCCTGAAATaGTCCCAGTCTGATGATGCACAGGTCCTAGGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: VTMRSGKVVSLK*SQSDDAQVLGD Trigger: GTCTCCTAGGACCTGTGCATCATCAGACTGGGATCATTTCAGGCTAACTACCTTTCCAGACCTCATGGTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR GCA 72 bp | GCCCTGGCATTCCCCTGTACTAAAGCATATAAAGTTTaGAAGACCAAGGGCCTGCCTCTCTTCCCAATGATG | + |
|
Preference number: 3 (lower is better) Translates to: ALAFPCTKAYKV*KTKGLPLFPMM Trigger: CATCATTGGGAAGAGAGGCAGGCCCTTGGTCTTGCAAACTTTATATGCTTTAGTACAGGGGAATGCCAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR CCA 72 bp | AGCTTTCTCTGGGTAGGATTTGTGTGTGGAGATCTGTaGCACAAGGTTAGCTCTGACACCAGAGATGGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SFLWVGFVCGDL*HKVSSDTRDGL Trigger: AAGCCCATCTCTGGTGTCAGAGCTAACCTTGTGCCACAGATCTCCACACACAAATCCTACCCAGAGAAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR CAA 90 bp | AATGGGTTGCAGAGAGCTGAGATCTTAGGTGTGTCAGCACTTCTGGGAGACCAGCCTTTCAGCAAAATCTaGCTGGCATATGCTGGAGTA | + |
|
Preference number: 3 (lower is better) Translates to: NGLQRAEILGVSALLGDQPFSKI*LAYAGV Trigger: TACTCCAGCATATGCCAGCAAGATTTTGCTGAAAGG...CTGGTCTCCCAGAAGTGCTGACACACCTAAGATCTCAGCTCTCTGCAACCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR CAA 90 bp | AATGGGTTGCAGAGAGCTGAGATCTTAGGTGTGTCAGCACTTCTGGGAGACCAGCAAACCCAGACACTATaGCATATCCCAGTGAGATTT | + |
|
Preference number: 3 (lower is better) Translates to: NGLQRAEILGVSALLGDQQTQTL*HIPVRF Trigger: AAATCTCACTGGGATATGCAATAGTGTCTGGGTTTG...CTGGTCTCCCAGAAGTGCTGACACACCTAAGATCTCAGCTCTCTGCAACCCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR CAA 90 bp | ACAAGGTTAGCTCTGACACCAGAGATGGGCTTTGAGAGACCTTCATCCTATCTGCTTTCTTTGAGTGGGTaGTGTGATCAGTGTCTACCC | + |
|
Preference number: 3 (lower is better) Translates to: TRLALTPEMGFERPSSYLLSLSG*CDQCLP Trigger: GGGTAGACACTGATCACACAACCCACTCAAAGAAAG...CAGATAGGATGAAGGTCTCTCAAAGCCCATCTCTGGTGTCAGAGCTAACCTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTCATTTACATTTCAAATGCTATCCTGAAAGTCCACTATACCCTGCCCCTGCCCAAGTGGGAGTGAGCTaGAGACAACCAACACTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LHLHFKCYPESPLYPAPAQVGVS*RQPTLS Trigger: TGAGAGTGTTGGTTGTCTCAAGCTCACTCCCACTTG...GGCAGGGGCAGGGTATAGTGGACTTTCAGGATAGCATTTGAAATGTAAATGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTCATTTACATTTCAAATGCTATCCTGAAAGTCCACTATACCCTGCCCCTGCCTTGCATAGCTATCTCTaGAGAGGCTATGCCAGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: LHLHFKCYPESPLYPAPALHSYL*RGYASA Trigger: GGCACTGGCATAGCCTCTCAAGAGATAGCTATGCAA...GGCAGGGGCAGGGTATAGTGGACTTTCAGGATAGCATTTGAAATGTAAATGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGAACCTACAATGTTATGTTTGTCACAACTCCTGGGAACCAGCTCTCTTAGGGTGTGAGCATCCACTTTaGTATTTGGAAGGCACTGGC | + |
|
Preference number: 3 (lower is better) Translates to: VNLQCYVCHNSWEPALLGCEHPL*YLEGTG Trigger: GCCAGTGCCTTCCAAATACAAAAGTGGATGCTCACA...CCCTAAGAGAGCTGGTTCCCAGGAGTTGTGACAAACATAACATTGTAGGTTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR TCA 72 bp | ACTAATCGTGAGCAACAGCGTAATGTGAGTAGCCAATaGTGCTACTTAGGACCATTGTGGAGTCCTAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: TNREQQRNVSSQ*CYLGPLWSPSL Trigger: CAGGCTAGGACTCCACAATGGTCCTAAGTAGCATCATTGGCTACTCACATTACGCTGTTGCTCACGATTAGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR TCA 72 bp | TGGAAGGAGATACAGAGAAAAAGTTTGGAGCTAAGGTaGAAGGATGGAGCATCCAGAGACTACCCCATTCGG | + |
|
Preference number: 3 (lower is better) Translates to: WKEIQRKSLELR*KDGASRDYPIR Trigger: CCGAATGGGGTAGTCTCTGGATGCTCCATCCTTTCACCTTAGCTCCAAACTTTTTCTCTGTATCTCCTTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR GCA 72 bp | ACCATGGAAGAACCTCCTTCCCCACATGTGGACCTATaGTGTGAGATAGAACTTGGTTTGTGCTCTGTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: TMEEPPSPHVDL*CEIELGLCSVK Trigger: TTTGACAGAGCACAAACCAAGTTCTATCTCACAGCATAGGTCCACATGTGGGGAAGGAGGTTCTTCCATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR GCA 72 bp | CTTTCCATATCTGCTCTTGAGTTTTCTGCATCTCCCTaGTTCTCCCTGGATCACTCCTATTCCTGGAAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: LSISALEFSASP*FSLDHSYSWKL Trigger: CAACTTCCAGGAATAGGAGTGATCCAGGGAGAAGCAGGGAGATGCAGAAAACTCAAGAGCAGATATGGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGAACCTACAATGTTATGTTTGTCACAACTCCTGGGAACCAGCTCTCTTAGGGTGCAAAATGAGGCAATaGATTTTCCAGCATCCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: VNLQCYVCHNSWEPALLGCKMRQ*IFQHPA Trigger: GGCAGGATGCTGGAAAATCAATTGCCTCATTTTGCA...CCCTAAGAGAGCTGGTTCCCAGGAGTTGTGACAAACATAACATTGTAGGTTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR GCA 72 bp | TATGGATCACTTCCTGTCAAGAGCACGAGTTCAATATaGATAACCATGGAAGAACCTCCTTCCCCACATGTG | + |
|
Preference number: 3 (lower is better) Translates to: YGSLPVKSTSSI*ITMEEPPSPHV Trigger: CACATGTGGGGAAGGAGGTTCTTCCATGGTTATGCATATTGAACTCGTGCTCTTGACAGGAAGTGATCCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR CCA 72 bp | CAACCCACCCACTCCAGATGTCCCTCAACAGAGGAATaGATACAGAAAATGTCGTACATTTACAGAATGGAG | + |
|
Preference number: 3 (lower is better) Translates to: QPTHSRCPSTEE*IQKMSYIYRME Trigger: CTCCATTCTGTAAATGTACGACATTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGGAGTGGGTGGGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR CCA 72 bp | CTGCTCTTGAGTTTTCTGCATCTCCCTGCTTCTCCCTaGATCACTCCTATTCCTGGAAGTTGTTCTAGTATT | + |
|
Preference number: 3 (lower is better) Translates to: LLLSFLHLPASP*ITPIPGSCSSI Trigger: AATACTAGAACAACTTCCAGGAATAGGAGTGATCCAGGGAGAAGCAGGGAGATGCAGAAAACTCAAGAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR CCA 72 bp | TTTACAGAGACAAAGTTTGGAGATGAGATGAAAGGATaGACCATCCAGAGACTGCCACACCCAGGGATTCAT | + |
|
Preference number: 3 (lower is better) Translates to: FTETKFGDEMKG*TIQRLPHPGIH Trigger: ATGAATCCCTGGGTGTGGCAGTCTCTGGATGGTCCATCCTTTCATCTCATCTCCAAACTTTGTCTCTGTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTCATTTACATTTCAAATGCTATCCTGAAAGTCCACTATACCCTGCCCCTGCCAGTCACAGTCATCTATaGGATGTAATACAGGGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LHLHFKCYPESPLYPAPASHSHL*DVIQGL Trigger: GAGGCCCTGTATTACATCCAATAGATGACTGTGACT...GGCAGGGGCAGGGTATAGTGGACTTTCAGGATAGCATTTGAAATGTAAATGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTAGGGTATGTATGACAACTGCTCAGGATCTTCTGACTTATAGAGTCTCTGGTCACACGATAGCTCTGTaGCTTTCTTTGAGTGGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: LRVCMTTAQDLLTYRVSGHTIAL*LSLSGL Trigger: CAACCCACTCAAAGAAAGCAACAGAGCTATCGTGTG...ACCAGAGACTCTATAAGTCAGAAGATCCTGAGCAGTTGTCATACATACCCTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR CCA 72 bp | TTGCATAGCTATCTCTTGAGAGGCTATGCCAGTGCCTaGCAAATACAGAAGTGGATAGTCACAGTCATCTAT | + |
|
Preference number: 3 (lower is better) Translates to: LHSYLLRGYASA*QIQKWIVTVIY Trigger: ATAGATGACTGTGACTATCCACTTCTGTATTTGCCAGGCACTGGCATAGCCTCTCAAGAGATAGCTATGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTAGGGTATGTATGACAACTGCTCAGGATCTTCTGACTTATAGAGTCTCTGGTCCATCACCACAGCTCTaGCAATATGTGAACAAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LRVCMTTAQDLLTYRVSGPSPQL*QYVNKC Trigger: ACACTTGTTCACATATTGCAAGAGCTGTGGTGATGG...ACCAGAGACTCTATAAGTCAGAAGATCCTGAGCAGTTGTCATACATACCCTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR CAA 90 bp | ACAAGGTTAGCTCTGACACCAGAGATGGGCTTTGAGAGACCTTCATCCTATCTGAGATCATATCTCTCTTaGCAACATAATTCACTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: TRLALTPEMGFERPSSYLRSYLS*QHNSLQ Trigger: CTGGAGTGAATTATGTTGCAAAGAGAGATATGATCT...CAGATAGGATGAAGGTCTCTCAAAGCCCATCTCTGGTGTCAGAGCTAACCTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR TCA 72 bp | TTCACCAAACACAAACACTATTGCATAGCTATCTCTTaGGAGGCTATGCCAGTGCCTGGCAAATACAGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: FTKHKHYCIAIS*EAMPVPGKYRS Trigger: ACTTCTGTATTTGCCAGGCACTGGCATAGCCTCTCAAGAGATAGCTATGCAATAGTGTTTGTGTTTGGTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR TCA 72 bp | GGTCTTACTGTCTCTGACTGGAGCTTGTATTTCCTGTaGGGCTGTGAACCTACAATGTTATGTTTGTCACAA | + |
|
Preference number: 3 (lower is better) Translates to: GLTVSDWSLYFL*GCEPTMLCLSQ Trigger: TTGTGACAAACATAACATTGTAGGTTCACAGCCTCACAGGAAATACAAGCTCCAGTCAGAGACAGTAAGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR TCA 72 bp | TTTGCTTTCCTCTTGCCATCTGGTTATCTCTGTTGTTaGCTGGTCTTACTGTCTCTGACTGGAGCTTGTATT | + |
|
Preference number: 3 (lower is better) Translates to: FAFLLPSGYLCC*LVLLSLTGACI Trigger: AATACAAGCTCCAGTCAGAGACAGTAAGACCAGTCAACAACAGAGATAACCAGATGGCAAGAGGAAAGCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR GCA 72 bp | TACCGTTATAGTTCTCCCTCATGGTTTTCCCCTATATaGATTAAGGATAAGACCTCTCACCCTGAGAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: YRYSSPSWFSPI*IKDKTSHPERT Trigger: AGTTCTCTCAGGGTGAGAGGTCTTATCCTTAATGCATATAGGGGAAAACCATGAGGGAGAACTATAACGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR CCA 72 bp | CTTTGTTCCTTCTTAGAATGGGGAACAAAATACCCATaGAGGGAGTTAGAGACAAAGTTCAGAGCTGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LCSFLEWGTKYP*RELETKFRAEK Trigger: CTTCTCAGCTCTGAACTTTGTCTCTAACTCCCTCCATGGGTATTTTGTTCCCCATTCTAAGAAGGAACAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR CCA 72 bp | AAGAATGGCTTTGGTCATGGTGTCTTTTCACAGCAATaGAAACCCAAACTAAGACAGACAGTTTCCCAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: KNGFGHGVFSQQ*KPKLRQTVSQL Trigger: TAGCTGGGAAACTGTCTGTCTTAGTTTGGGTTTCCATTGCTGTGAAAAGACACCATGACCAAAGCCATTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR CCA 72 bp | GAATTTAAATCAAAATCTTGTTTTTCCAGTGTGGTGTaGCATCCAGGGCTTGCTGTGGTAGGAGAACTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: EFKSKSCFSSVV*HPGLAVVGELH Trigger: ATGCAGTTCTCCTACCACAGCAAGCCCTGGATGCCACACCACACTGGAAAAACAAGATTTTGATTTAAATTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGAACCTACAATGTTATGTTTGTCACAACTCCTGGGAACCAGCTCTCTTAGGGTCTCTGATTATTAGGTaGTCAGTATCACAGCTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: VNLQCYVCHNSWEPALLGSLIIR*SVSQLS Trigger: ACTTAGCTGTGATACTGACAACCTAATAATCAGAGA...CCCTAAGAGAGCTGGTTCCCAGGAGTTGTGACAAACATAACATTGTAGGTTCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGAACCTACAATGTTATGTTTGTCACAACTCCTGGGAACCAGCTCTCTTAGGGGGAGATAGCAGAAAGTaGTTTGTATTTTGTCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: VNLQCYVCHNSWEPALLGGDSRK*FVFCLR Trigger: TCTCAGACAAAATACAAACAACTTTCTGCTATCTCC...CCCTAAGAGAGCTGGTTCCCAGGAGTTGTGACAAACATAACATTGTAGGTTCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR CAA 90 bp | TCATTCCTCCTTAGAATGGGGAACAAAATAGCCATGGAAGGAGATACAGAGAAACTCTTAAACCTCACCTaGGTGGAGATAGCAGAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: SFLLRMGNKIAMEGDTEKLLNLT*VEIAES Trigger: ACTTTCTGCTATCTCCACCAAGGTGAGGTTTAAGAG...TTTCTCTGTATCTCCTTCCATGGCTATTTTGTTCCCCATTCTAAGGAGGAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGAACCTACAATGTTATGTTTGTCACAACTCCTGGGAACCAGCTCTCTTAGGGCACCCTGAGAGAACTTaGAGATATAGAAATTTGACT | + |
|
Preference number: 3 (lower is better) Translates to: VNLQCYVCHNSWEPALLGHPERT*RYRNLT Trigger: AGTCAAATTTCTATATCTCAAAGTTCTCTCAGGGTG...CCCTAAGAGAGCTGGTTCCCAGGAGTTGTGACAAACATAACATTGTAGGTTCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR GCA 72 bp | CATGAGACAGCTATCAGGGTCCTTTCAGCAAAATCTTaGTGGCATATGCTGGAGTACTATTCAGCTATTAAA | + |
|
Preference number: 3 (lower is better) Translates to: HETAIRVLSAKS*WHMLEYYSAIK Trigger: TTTAATAGCTGAATAGTACTCCAGCATATGCCAGCAAGATTTTGCTGAAAGGACCCTGATAGCTGTCTCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR CCA 72 bp | GAGACAGCTATCAGGGTCCTTTCAGCAAAATCTTGCTaGCATATGCTGGAGTACTATTCAGCTATTAAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: ETAIRVLSAKSC*HMLEYYSAIKN Trigger: GTTTTTAATAGCTGAATAGTACTCCAGCATATGCCAGCAAGATTTTGCTGAAAGGACCCTGATAGCTGTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR CCA 72 bp | CTGTTGCTTAGTTTCTTTTGCTTTCCTCTTGCCATCTaGTTATCTCTGTTGTTGACTGGTCTTACTGTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LLLSFFCFPLAI*LSLLLTGLTVS Trigger: AGAGACAGTAAGACCAGTCAACAACAGAGATAACCAGATGGCAAGAGGAAAGCAAAAGAAACTAAGCAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR CCA 72 bp | GCATATATAGCCGAAGATAACTTAGTCAGCCATTATTaGGAAGAGAGGCCCCTTGGTCTTGCAAACTTTATA | + |
|
Preference number: 3 (lower is better) Translates to: AYIAEDNLVSHY*EERPLGLANFI Trigger: TATAAAGTTTGCAAGACCAAGGGGCCTCTCTTCCCAATAATGGCTGACTAAGTTATCTTCGGCTATATATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR GCA 72 bp | CATGTGGACCTATGCTGTGAGATAGAACTTGGTTTGTaGTCTGTCAAATATCAAAACACAGACAGTAAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: HVDLCCEIELGL*SVKYQNTDSKL Trigger: AAGCTTACTGTCTGTGTTTTGATATTTGACAGAGCACAAACCAAGTTCTATCTCACAGCATAGGTCCACATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR GCA 72 bp | ATCACTCCTATTCCTGGAAGTTGTTCTAGTATTTCTTaGCCTACAACCGATCTTTGTTACAACCAACTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: ITPIPGSCSSIS*PTTDLCYNQLA Trigger: TGCTAGTTGGTTGTAACAAAGATCGGTTGTAGGGCAAGAAATACTAGAACAACTTCCAGGAATAGGAGTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR GCA 72 bp | CTATCAGGGTCCTTTCAGCAAAATCTTGCTGGCATATaGTGGAGTACTATTCAGCTATTAAAAACAACGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LSGSFQQNLAGI*WSTIQLLKTTN Trigger: ATTCGTTGTTTTTAATAGCTGAATAGTACTCCAGCATATGCCAGCAAGATTTTGCTGAAAGGACCCTGATAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR CCA 72 bp | GAGCCATTGCTGTCTATAAACTACCTTATCTCTTCATaGCTGCTGACTAGCATTGAATTTATCATTTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: EPLLSINYLISS*LLTSIEFIIFM Trigger: CATGAAAATGATAAATTCAATGCTAGTCAGCAGCCATGAAGAGATAAGGTAGTTTATAGACAGCAATGGCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR-3UTR CAA 90 bp | TTGCAAAATACAAGAAAATCAAGAAGGAAGACCAACTTGTGGATACTTCATTCCCCAAAGTTTATTTTCTaGTGCTCACCTATATTACCG | + |
|
Preference number: 3 (lower is better) Translates to: LQNTRKSRRKTNLWILHSPKFIF*CSPILP Trigger: CGGTAATATAGGTGAGCACAAGAAAATAAACTTTGG...GGAATGAAGTATCCACAAGTTGGTCTTCCTTCTTGATTTTCTTGTATTTTGCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR TCA 72 bp | TGTCTGTCTTTGTCACTGAAATTTACTTCCTGTATGTaGCAAAATGCTGTGTCCTGTTTATATAGACAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: CLSLSLKFTSCM*QNAVSCLYRQS Trigger: AGACTGTCTATATAAACAGGACACAGCATTTTGTCACATACAGGAAGTAAATTTCAGTGACAAAGACAGACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR CCA 72 bp | TTAACTGAGAATTTTCCTGTCTATAGTTACCTCAGCTaGCATTTGTTTTCTCTTAGGGTATGTATGACAACT | + |
|
Preference number: 3 (lower is better) Translates to: LTENFPVYSYLS*HLFSLRVCMTT Trigger: AGTTGTCATACATACCCTAAGAGAAAACAAATGCCAGCTGAGGTAACTATAGACAGGAAAATTCTCAGTTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR CAA 72 bp | TGTTCCACCTATAGGTTTGCAGAACCCTTCAGCTCCTaGGGTACTTTCTCTAGCTCCTCCATTGGGGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: CSTYRFAEPFSS*GTFSSSSIGDP Trigger: AGGGTCCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTGAAGGGTTCTGCAAACCTATAGGTGGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| CDS-3UTR CCA 90 bp | AATGGGTTGCAGAGAGCTGAGATCTTAGGTGTGTCAGCACTTCTGGGAGACCAGAGTGATTTACTACATTaGAATGGCAAAAGGAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NGLQRAEILGVSALLGDQSDLLH*NGKRRG Trigger: ACCTCTCCTTTTGCCATTCCAATGTAGTAAATCACT...CTGGTCTCCCAGAAGTGCTGACACACCTAAGATCTCAGCTCTCTGCAACCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR CAA 72 bp | GTGTTCCATCCAATAGATGACTGTGAGCATCCACTTTaGTATTTGGAAGGCACTGGCATAGGCTCACATGAG | + |
|
Preference number: 4 (lower is better) Translates to: VFHPIDDCEHPL*YLEGTGIGSHE Trigger: CTCATGTGAGCCTATGCCAGTGCCTTCCAAATACAAAAGTGGATGCTCACAGTCATCTATTGGATGGAACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR CAA 72 bp | GGCCACTTAGGTATTCACCAGTATTCTTCTTTGTTGTaGGGGCATCCACCTTTAGCTGCTAGTCCCAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: GHLGIHQYSSLL*GHPPLAASPRI Trigger: TATTCTGGGACTAGCAGCTAAAGGTGGATGCCCCAACAACAAAGAAGAATACTGGTGAATACCTAAGTGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| CDS-3UTR TCA 90 bp | CTTAGGGTATGTATGACAACTGCTCAGGATCTTCTGACTTATAGAGTCTCTGGTCTATTACCTTGGGAGTaGCAGCTGAGGCATAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: LRVCMTTAQDLLTYRVSGLLPWE*QLRHKH Trigger: GTGTTTATGCCTCAGCTGTCACTCCCAAGGTAATAG...ACCAGAGACTCTATAAGTCAGAAGATCCTGAGCAGTTGTCATACATACCCTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR CAA 72 bp | TTCTTTTGCTTTCCTCTTGCCATCTGGTTATCTCTGTaGTTGACTGGTCTTACTGTCTCTGACTGGAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FFCFPLAIWLSL*LTGLTVSDWSL Trigger: CAAGCTCCAGTCAGAGACAGTAAGACCAGTCAACAACAGAGATAACCAGATGGCAAGAGGAAAGCAAAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| CDS-3UTR TCA 90 bp | CTTCATTTACATTTCAAATGCTATCCTGAAAGTCCACTATACCCTGCCCCTGCCTGTAAGAACCCACAATaGGCAGGGTACATATTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LHLHFKCYPESPLYPAPACKNPQ*AGYILL Trigger: CAACAATATGTACCCTGCTCATTGTGGGTTCTTACA...GGCAGGGGCAGGGTATAGTGGACTTTCAGGATAGCATTTGAAATGTAAATGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR CAA 72 bp | TACCTACCTACCTATGTCTTGCCATCACCACAGCTCTaGCAATATGTGAACAAGTGTCTATTCAACACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: YLPTYVLPSPQL*QYVNKCLFNTD Trigger: GTCTGTGTTGAATAGACACTTGTTCACATATTGCAAGAGCTGTGGTGATGGCAAGACATAGGTAGGTAGGTA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR CAA 72 bp | TTTTGCTTTCCTCTTGCCATCTGGTTATCTCTGTTGTaGACTGGTCTTACTGTCTCTGACTGGAGCTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: FCFPLAIWLSLL*TGLTVSDWSLY Trigger: ATACAAGCTCCAGTCAGAGACAGTAAGACCAGTCAACAACAGAGATAACCAGATGGCAAGAGGAAAGCAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| CDS-3UTR CCA 90 bp | TCATTCCTCCTTAGAATGGGGAACAAAATAGCCATGGAAGGAGATACAGAGAAAATGCACAGGTGGAAATaGCCTTCTTTTGTCCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SFLLRMGNKIAMEGDTEKMHRWK*PSFVHQ Trigger: CTGATGGACAAAAGAAGGCCATTTCCACCTGTGCAT...TTTCTCTGTATCTCCTTCCATGGCTATTTTGTTCCCCATTCTAAGGAGGAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| CDS-3UTR GCA 90 bp | TCATTCCTCCTTAGAATGGGGAACAAAATAGCCATGGAAGGAGATACAGAGAAAGGTATAGAATACAGATaGTACCTTGTCAGTGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SFLLRMGNKIAMEGDTEKGIEYR*YLVSVH Trigger: ATGGACACTGACAAGGTAGCATCTGTATTCTATACC...TTTCTCTGTATCTCCTTCCATGGCTATTTTGTTCCCCATTCTAAGGAGGAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| CDS-3UTR CCA 90 bp | TTGCAAAATACAAGAAAATCAAGAAGGAAGACCAACTTGTGGATACTTCATTCCTGGCAAAAGGAGAGGTaGAAAGTGAAGGCAACATGG | + |
|
Preference number: 4 (lower is better) Translates to: LQNTRKSRRKTNLWILHSWQKER*KVKATW Trigger: CCATGTTGCCTTCACTTTCCACCTCTCCTTTTGCCA...GGAATGAAGTATCCACAAGTTGGTCTTCCTTCTTGATTTTCTTGTATTTTGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR CAA 72 bp | AATTATGTCAAAGTCTGTCTTCCTGATCTGACCAGTTaGGTGGTGGCTGTGAATTACATGAGTATAGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: NYVKVCLPDLTS*VVAVNYMSIVK Trigger: CTTGACTATACTCATGTAATTCACAGCCACCACCAAACTGGTCAGATCAGGAAGACAGACTTTGACATAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR CAA 72 bp | GCTCTTAAACCTCACCTTGGTGGAGATAGCAGAAAGTaGTTTGTATTTTGTCTGAGAAGGCTTATAAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: ALKPHLGGDSRK*FVFCLRRLIRM Trigger: CATCCTTATAAGCCTTCTCAGACAAAATACAAACAACTTTCTGCTATCTCCACCAAGGTGAGGTTTAAGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR CAA 72 bp | AAAGACCCAAAAGTAAACCCACACACCTACAGACACTaGATTTTTGACAAAGAACCTGGAACCATACATTGG | + |
|
Preference number: 4 (lower is better) Translates to: KDPKVNPHTYRH*IFDKEPGTIHW Trigger: CCAATGTATGGTTCCAGGTTCTTTGTCAAAAATCAAGTGTCTGTAGGTGTGTGGGTTTACTTTTGGGTCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| CDS-3UTR CCA 90 bp | TCATTCCTCCTTAGAATGGGGAACAAAATAGCCATGGAAGGAGATACAGAGAAATTTACTACATTGGAATaGCAAAAGGAGAGGTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SFLLRMGNKIAMEGDTEKFTTLE*QKERWK Trigger: TTTCCACCTCTCCTTTTGCCATTCCAATGTAGTAAA...TTTCTCTGTATCTCCTTCCATGGCTATTTTGTTCCCCATTCTAAGGAGGAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR CAA 72 bp | TGCATTAAGGATAAGACCTCTCACCCTGAGAGAACTTaGAGATATAGAAATTTGACTTTAGCATCTTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CIKDKTSHPERT*RYRNLTLASWA Trigger: TGCCCAAGATGCTAAAGTCAAATTTCTATATCTCAAAGTTCTCTCAGGGTGAGAGGTCTTATCCTTAATGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| CDS-3UTR GCA 90 bp | TCATTCCTCCTTAGAATGGGGAACAAAATAGCCATGGAAGGAGATACAGAGAAAAGCTATATTGAGTGCTaGCAAGATAAACAGTACAAT | + |
|
Preference number: 4 (lower is better) Translates to: SFLLRMGNKIAMEGDTEKSYIEC*QDKQYN Trigger: ATTGTACTGTTTATCTTGGCAGCACTCAATATAGCT...TTTCTCTGTATCTCCTTCCATGGCTATTTTGTTCCCCATTCTAAGGAGGAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR CAA 72 bp | AGATTTGTAATCCCATATCAGCTCTTAAACCTCACCTaGGTGGAGATAGCAGAAAGTTGTTTGTATTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RFVIPYQLLNLT*VEIAESCLYFV Trigger: GACAAAATACAAACAACTTTCTGCTATCTCCACCAAGGTGAGGTTTAAGAGCTGATATGGGATTACAAATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
||
| 3UTR CAA 72 bp | CCACATTTAAAGCAAATACCAGGTGGAGATTCTTCATaGTCTAACATCTTTTTATATGCAGACTGGAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: PHLKQIPGGDSS*SNIFLYADWRY Trigger: GTACCTCCAGTCTGCATATAAAAAGATGTTAGACAATGAAGAATCTCCACCTGGTATTTGCTTTAAATGTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| 3UTR CAA 72 bp | CTTTCTGTTTCTACTTGTTTGATATCAACAATGAGTTaGATTATTTCCTTGGGTCTAATCCTCTTGGGTGTA | + |
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Preference number: 4 (lower is better) Translates to: LSVSTCLISTMS*IISLGLILLGV Trigger: TACACCCAAGAGGATTAGACCCAAGGAAATAATCAAACTCATTGTTGATATCAAACAAGTAGAAACAGAAAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| CDS-3UTR CAA 90 bp | CTTCATTTACATTTCAAATGCTATCCTGAAAGTCCACTATACCCTGCCCCTGCCGGAAATGGCCTTCTTTaGTCCATCAGTAGAACGCAT | + |
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Preference number: 5 (lower is better) Translates to: LHLHFKCYPESPLYPAPAGNGLL*SISRTH Trigger: ATGCGTTCTACTGATGGACAAAAGAAGGCCATTTCC...GGCAGGGGCAGGGTATAGTGGACTTTCAGGATAGCATTTGAAATGTAAATGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217182.3 |
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| CDS GCA 90 bp | GGAAATGGCCTTCTTTTGTCCATCAGTAGAACGCATCCTCAAGATTaGAACAAAAATAAGTACATAAGAGTTCACGATAACCAATATAGT | + |
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Preference number: 5 (lower is better) Translates to: GNGLLLSISRTHPQD*NKNKYIRVHDNQYS Trigger: ACTATATTGGTTATCGTGAACTCTTATGTACTTATTTTTGTTGCAATCTTGAGGATGCGTTCTACTGATGGACAAAAGAAGGCCATTTCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053113.5 ENSMUST00000217182.3 |
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