Pregenerated sensors for OLFR1487 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094846Ensembl transcript IDs: ENSMUST00000209005.4, ENSMUST00000216688.3, ENSMUST00000217061.3
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACTGCTCTCTCTCTCTCCTCTCTTCTACTTCAGTATCTCTGGTATaGCAGCTGATTGCCATGGAGTGTCCCCTTTGTTCAGTCTGCTGG | + |
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Preference number: 1 (lower is better) Translates to: HCSLSLLSSTSVSLV*QLIAMECPLCSVCW Trigger: CCAGCAGACTGAACAAAGGGGACACTCCATGGCAATCAGCTGCCATACCAGAGATACTGAAGTAGAAGAGAGGAGAGAGAGAGAGCAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217061.3 |
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| 3UTR GCA 90 bp | CTGGTATGGCAGCTGATTGCCATGGAGTGTCCCCTTTGTTCAGTCTaGTGGCACTCATTTGAAACTCACCTGATCTCAACACCAACTGCT | + |
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Preference number: 1 (lower is better) Translates to: LVWQLIAMECPLCSV*WHSFETHLISTPTA Trigger: AGCAGTTGGTGTTGAGATCAGGTGAGTTTCAAATGAGTGCCAGCAGACTGAACAAAGGGGACACTCCATGGCAATCAGCTGCCATACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217061.3 |
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| 3UTR CCA 90 bp | GTATGGCAGCTGATTGCCATGGAGTGTCCCCTTTGTTCAGTCTGCTaGCACTCATTTGAAACTCACCTGATCTCAACACCAACTGCTTAC | + |
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Preference number: 1 (lower is better) Translates to: VWQLIAMECPLCSVC*HSFETHLISTPTAY Trigger: GTAAGCAGTTGGTGTTGAGATCAGGTGAGTTTCAAATGAGTGCCAGCAGACTGAACAAAGGGGACACTCCATGGCAATCAGCTGCCATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217061.3 |
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| 3UTR TCA 90 bp | ATTATCATCCACTTGAAAAGAGCAAGAAACACAGCACAATCAGGTTaGCTACACTGCTCTCTCTCTCTCCTCTCTTCTACTTCAGTATCT | + |
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Preference number: 1 (lower is better) Translates to: IIIHLKRARNTAQSG*LHCSLSLLSSTSVS Trigger: AGATACTGAAGTAGAAGAGAGGAGAGAGAGAGAGCAGTGTAGTCAACCTGATTGTGCTGTGTTTCTTGCTCTTTTCAAGTGGATGATAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217061.3 |
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| 3UTR GCA 90 bp | ACACACACACACACACACACACACACATATGCACACACACATACATaGACAAATTTATACAATGTGTATGGCCAAAACTGTACATTTCCC | + |
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Preference number: 1 (lower is better) Translates to: THTHTHTHTYAHTHT*TNLYNVYGQNCTFP Trigger: GGGAAATGTACAGTTTTGGCCATACACATTGTATAAATTTGTGCATGTATGTGTGTGTGCATATGTGTGTGTGTGTGTGTGTGTGTGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217061.3 |
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| 3UTR TCA 90 bp | GCCAACAACATAGAGATAAAACAATTTGATGCAAGTCTCTCTTGCTaGAACAATAAGTTTTGTCATGGTTATGACATGGTATGGGTAAGG | + |
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Preference number: 1 (lower is better) Translates to: ANNIEIKQFDASLSC*NNKFCHGYDMVWVR Trigger: CCTTACCCATACCATGTCATAACCATGACAAAACTTATTGTTTCAGCAAGAGAGACTTGCATCAAATTGTTTTATCTCTATGTTGTTGGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217061.3 |
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| 3UTR CAA 90 bp | AATTATCATCCACTTGAAAAGAGCAAGAAACACAGCACAATCAGGTaGACTACACTGCTCTCTCTCTCTCCTCTCTTCTACTTCAGTATC | + |
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Preference number: 2 (lower is better) Translates to: NYHPLEKSKKHSTIR*TTLLSLSPLFYFSI Trigger: GATACTGAAGTAGAAGAGAGGAGAGAGAGAGAGCAGTGTAGTCAACCTGATTGTGCTGTGTTTCTTGCTCTTTTCAAGTGGATGATAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217061.3 |
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| 3UTR-3UTR GCA 90 bp | AGACTATTGTGTATCAGTAACGTAAAACCACTCTCCTGTCCTATTTTGAATCCTAACCAGCCATGGAGATaGAGAGAACACAGTGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: RLLCISNVKPLSCPILNPNQPWR*REHSGS Trigger: AGAACCACTGTGTTCTCTGCATCTCCATGGCTGGTT...AGGATTCAAAATAGGACAGGAGAGTGGTTTTACGTTACTGATACACAATAGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000209005.4 ENSMUST00000216688.3 ENSMUST00000217061.3 |
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| 3UTR-3UTR TCA 90 bp | GTTATGATGTTTGAAACCAGCCATGGAGATGCAGAGAACACAGTGGTTCTTAAATGTCCCCAATTTCCATaGTCCAACATTAGCTGTATA | + |
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Preference number: 2 (lower is better) Translates to: VMMFETSHGDAENTVVLKCPQFP*SNISCI Trigger: TATACAGCTAATGTTGGATCATGGAAATTGGGGACA...TTTAAGAACCACTGTGTTCTCTGCATCTCCATGGCTGGTTTCAAACATCATAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209005.4 ENSMUST00000216688.3 ENSMUST00000217061.3 |
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| 3UTR-3UTR CCA 90 bp | AGACTATTGTGTATCAGTAACGTAAAACCACTCTCCTGTCCTATTTTGAATCCTATGCAGAGAACACAGTaGTTCTTAAATTCCCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: RLLCISNVKPLSCPILNPMQRTQ*FLNSLL Trigger: CAGGAGGGAATTTAAGAACCACTGTGTTCTCTGCAT...AGGATTCAAAATAGGACAGGAGAGTGGTTTTACGTTACTGATACACAATAGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000209005.4 ENSMUST00000216688.3 ENSMUST00000217061.3 |
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| 3UTR-3UTR CCA 90 bp | AGTCAACCTAGAGAGCATGCCAACAACATAGAGATAAAACAATTTGATGCAAGTAATGTTCAGGAAGTGTaGTTTGAGAGACTCCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: SQPREHANNIEIKQFDASNVQEV*FERLLS Trigger: AGAGAGGAGTCTCTCAAACCACACTTCCTGAACATT...ACTTGCATCAAATTGTTTTATCTCTATGTTGTTGGCATGCTCTCTAGGTTGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217061.3 |
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| 3UTR-3UTR TCA 90 bp | AGTCAACCTAGAGAGCATGCCAACAACATAGAGATAAAACAATTTGATGCAAGTTGTCCCCAATTTCCATaGTCCAACATTAGCTGTATA | + |
|
Preference number: 2 (lower is better) Translates to: SQPREHANNIEIKQFDASCPQFP*SNISCI Trigger: TATACAGCTAATGTTGGATCATGGAAATTGGGGACA...ACTTGCATCAAATTGTTTTATCTCTATGTTGTTGGCATGCTCTCTAGGTTGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217061.3 |
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| 3UTR-3UTR TCA 90 bp | AGTCAACCTAGAGAGCATGCCAACAACATAGAGATAAAACAATTTGATGCAAGTGAAAATGAGTATATCTaGGAGAGAGAGATGCATTGT | + |
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Preference number: 2 (lower is better) Translates to: SQPREHANNIEIKQFDASENEYI*EREMHC Trigger: ACAATGCATCTCTCTCTCTCAGATATACTCATTTTC...ACTTGCATCAAATTGTTTTATCTCTATGTTGTTGGCATGCTCTCTAGGTTGACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217061.3 |
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| 3UTR GCA 72 bp | CTCTTCTACTTCAGTATCTCTGGTATGGCAGCTGATTaGCATGGAGTGTCCCCTTTGTTCAGTCTGCTGGCA | + |
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Preference number: 3 (lower is better) Translates to: LFYFSISGMAAD*HGVSPLFSLLA Trigger: TGCCAGCAGACTGAACAAAGGGGACACTCCATGGCAATCAGCTGCCATACCAGAGATACTGAAGTAGAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217061.3 |
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| 3UTR TCA 72 bp | GGAGTGTCCCCTTTGTTCAGTCTGCTGGCACTCATTTaGAACTCACCTGATCTCAACACCAACTGCTTACAG | + |
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Preference number: 3 (lower is better) Translates to: GVSPLFSLLALI*NSPDLNTNCLQ Trigger: CTGTAAGCAGTTGGTGTTGAGATCAGGTGAGTTTCAAATGAGTGCCAGCAGACTGAACAAAGGGGACACTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217061.3 |
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| 3UTR GCA 72 bp | CAGCTGATTGCCATGGAGTGTCCCCTTTGTTCAGTCTaGTGGCACTCATTTGAAACTCACCTGATCTCAACA | + |
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Preference number: 3 (lower is better) Translates to: QLIAMECPLCSV*WHSFETHLIST Trigger: TGTTGAGATCAGGTGAGTTTCAAATGAGTGCCAGCAGACTGAACAAAGGGGACACTCCATGGCAATCAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217061.3 |
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| 3UTR CCA 72 bp | CTGATTGCCATGGAGTGTCCCCTTTGTTCAGTCTGCTaGCACTCATTTGAAACTCACCTGATCTCAACACCA | + |
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Preference number: 3 (lower is better) Translates to: LIAMECPLCSVC*HSFETHLISTP Trigger: TGGTGTTGAGATCAGGTGAGTTTCAAATGAGTGCCAGCAGACTGAACAAAGGGGACACTCCATGGCAATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217061.3 |
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| 3UTR CCA 72 bp | CTCTCTCTCCTCTCTTCTACTTCAGTATCTCTGGTATaGCAGCTGATTGCCATGGAGTGTCCCCTTTGTTCA | + |
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Preference number: 3 (lower is better) Translates to: LSLLSSTSVSLV*QLIAMECPLCS Trigger: TGAACAAAGGGGACACTCCATGGCAATCAGCTGCCATACCAGAGATACTGAAGTAGAAGAGAGGAGAGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217061.3 |
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| 3UTR GCA 72 bp | ACTTGTATGTCTCTGAAAACTTACCTGCTCAGGCCATaGCAACCTTCAGATTGTGGCCAGGCAACACAACAA | + |
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Preference number: 3 (lower is better) Translates to: TCMSLKTYLLRP*QPSDCGQATQQ Trigger: TTGTTGTGTTGCCTGGCCACAATCTGAAGGTTGGCATGGCCTGAGCAGGTAAGTTTTCAGAGACATACAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217061.3 |
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| 3UTR TCA 72 bp | CACTTGAAAAGAGCAAGAAACACAGCACAATCAGGTTaGCTACACTGCTCTCTCTCTCTCCTCTCTTCTACT | + |
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Preference number: 3 (lower is better) Translates to: HLKRARNTAQSG*LHCSLSLLSST Trigger: AGTAGAAGAGAGGAGAGAGAGAGAGCAGTGTAGTCAACCTGATTGTGCTGTGTTTCTTGCTCTTTTCAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217061.3 |
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| 3UTR CCA 72 bp | TGTTTGAAACCAGCCATGGAGATGCAGAGAACACAGTaGTTCTTAAATTCCCTCCTGAACAGTTATAGTGCA | + |
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Preference number: 3 (lower is better) Translates to: CLKPAMEMQRTQ*FLNSLLNSYSA Trigger: TGCACTATAACTGTTCAGGAGGGAATTTAAGAACCACTGTGTTCTCTGCATCTCCATGGCTGGTTTCAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209005.4 ENSMUST00000216688.3 ENSMUST00000217061.3 |
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| 3UTR-3UTR CAA 90 bp | AGTCAACCTAGAGAGCATGCCAACAACATAGAGATAAAACAATTTGATGCAAGTTTCAGGAAGTGTGGTTaGAGAGACTCCTCTCTGGCA | + |
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Preference number: 3 (lower is better) Translates to: SQPREHANNIEIKQFDASFRKCG*RDSSLA Trigger: TGCCAGAGAGGAGTCTCTCAAACCACACTTCCTGAA...ACTTGCATCAAATTGTTTTATCTCTATGTTGTTGGCATGCTCTCTAGGTTGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217061.3 |
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| 3UTR CCA 72 bp | AATTGCTATATCCCAATAAGCAATGTTCAGGAAGTGTaGTTTGAGAGACTCCTCTCTGGCATTAGTGTGCTA | + |
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Preference number: 3 (lower is better) Translates to: NCYIPISNVQEV*FERLLSGISVL Trigger: TAGCACACTAATGCCAGAGAGGAGTCTCTCAAACCACACTTCCTGAACATTGCTTATTGGGATATAGCAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209005.4 ENSMUST00000216688.3 ENSMUST00000217061.3 |
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| 3UTR TCA 72 bp | TCCTATTTTGAATCCTTGATGTTAGGTTATGATGTTTaGAACCAGCCATGGAGATGCAGAGAACACAGTGGT | + |
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Preference number: 3 (lower is better) Translates to: SYFESLMLGYDV*NQPWRCREHSG Trigger: ACCACTGTGTTCTCTGCATCTCCATGGCTGGTTTCAAACATCATAACCTAACATCAAGGATTCAAAATAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209005.4 ENSMUST00000216688.3 ENSMUST00000217061.3 |
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| 3UTR TCA 72 bp | TTCTATGGACTAGCCTATGTGACTCTTATAAAGTTCTaGGCTCAGGAACCTAGTAAGTTTCATTGGCATCCT | + |
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Preference number: 3 (lower is better) Translates to: FYGLAYVTLIKF*AQEPSKFHWHP Trigger: AGGATGCCAATGAAACTTACTAGGTTCCTGAGCTCAGAACTTTATAAGAGTCACATAGGCTAGTCCATAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209005.4 ENSMUST00000216688.3 ENSMUST00000217061.3 |
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| CDS-3UTR TCA 90 bp | ATGTTTGAAACCAGCCATGGAGATGCAGAGAACACAGTGGTTCTTAAATTCCCTCTTGGGAGTGACAGCTaGGGCATAAACACAGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: MFETSHGDAENTVVLKFPLGSDS*GINTVH Trigger: GTGGACTGTGTTTATGCCTCAGCTGTCACTCCCAAG...AGGGAATTTAAGAACCACTGTGTTCTCTGCATCTCCATGGCTGGTTTCAAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209005.4 ENSMUST00000216688.3 ENSMUST00000217061.3 |
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| CDS-3UTR TCA 90 bp | ATGTTTGAAACCAGCCATGGAGATGCAGAGAACACAGTGGTTCTTAAATTCCCTCCATCACCTTGGGAGTaGCAGCTGAGGCATAAACAC | + |
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Preference number: 4 (lower is better) Translates to: MFETSHGDAENTVVLKFPPSPWE*QLRHKH Trigger: GTGTTTATGCCTCAGCTGTCACTCCCAAGGTGATGG...AGGGAATTTAAGAACCACTGTGTTCTCTGCATCTCCATGGCTGGTTTCAAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209005.4 ENSMUST00000216688.3 ENSMUST00000217061.3 |
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| CDS-3UTR TCA 90 bp | GTTATGATGTTTGAAACCAGCCATGGAGATGCAGAGAACACAGTGGTTCTTAAACCATCACCTTGGGAGTaGCAGCTGAGGCATAAACAC | + |
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Preference number: 4 (lower is better) Translates to: VMMFETSHGDAENTVVLKPSPWE*QLRHKH Trigger: GTGTTTATGCCTCAGCTGTCACTCCCAAGGTGATGG...TTTAAGAACCACTGTGTTCTCTGCATCTCCATGGCTGGTTTCAAACATCATAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209005.4 ENSMUST00000216688.3 ENSMUST00000217061.3 |
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| CDS-3UTR TCA 90 bp | ATGTTTGAAACCAGCCATGGAGATGCAGAGAACACAGTGGTTCTTAAATTCCCTTCAGTATCCATGGAGTaGTTGGAGCTGGGCTGTAAG | + |
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Preference number: 4 (lower is better) Translates to: MFETSHGDAENTVVLKFPSVSME*LELGCK Trigger: CTTACAGCCCAGCTCCAATCACTCCATGGATACTGA...AGGGAATTTAAGAACCACTGTGTTCTCTGCATCTCCATGGCTGGTTTCAAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209005.4 ENSMUST00000216688.3 ENSMUST00000217061.3 |
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| CDS-3UTR GCA 90 bp | ATGTTTGAAACCAGCCATGGAGATGCAGAGAACACAGTGGTTCTTAAATTCCCTAAATGGCCTTCTTCCTaGTCTCAGCAGAGCGCATTC | + |
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Preference number: 4 (lower is better) Translates to: MFETSHGDAENTVVLKFPKWPSS*SQQSAF Trigger: GAATGCGCTCTGCTGAGAGCAGGAAGAAGGCCATTT...AGGGAATTTAAGAACCACTGTGTTCTCTGCATCTCCATGGCTGGTTTCAAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209005.4 ENSMUST00000216688.3 ENSMUST00000217061.3 |
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| CDS-3UTR GCA 90 bp | ATGTTTGAAACCAGCCATGGAGATGCAGAGAACACAGTGGTTCTTAAATTCCCTAGTGGTAAGGTGGGATaGACAGGTGGAAATGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: MFETSHGDAENTVVLKFPSGKVG*TGGNGL Trigger: AAGGCCATTTCCACCTGTGCATCCCACCTTACCACT...AGGGAATTTAAGAACCACTGTGTTCTCTGCATCTCCATGGCTGGTTTCAAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209005.4 ENSMUST00000216688.3 ENSMUST00000217061.3 |
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| 3UTR CAA 72 bp | CCACTTGAAAAGAGCAAGAAACACAGCACAATCAGGTaGACTACACTGCTCTCTCTCTCTCCTCTCTTCTAC | + |
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Preference number: 4 (lower is better) Translates to: PLEKSKKHSTIR*TTLLSLSPLFY Trigger: GTAGAAGAGAGGAGAGAGAGAGAGCAGTGTAGTCAACCTGATTGTGCTGTGTTTCTTGCTCTTTTCAAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217061.3 |
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| CDS-3UTR TCA 90 bp | GTTATGATGTTTGAAACCAGCCATGGAGATGCAGAGAACACAGTGGTTCTTAAATCAGTATCCATGGAGTaGTTGGAGCTGGGCTGTAAG | + |
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Preference number: 4 (lower is better) Translates to: VMMFETSHGDAENTVVLKSVSME*LELGCK Trigger: CTTACAGCCCAGCTCCAATCACTCCATGGATACTGA...TTTAAGAACCACTGTGTTCTCTGCATCTCCATGGCTGGTTTCAAACATCATAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209005.4 ENSMUST00000216688.3 ENSMUST00000217061.3 |
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| CDS-3UTR GCA 90 bp | GTTATGATGTTTGAAACCAGCCATGGAGATGCAGAGAACACAGTGGTTCTTAAAAAATGGCCTTCTTCCTaGTCTCAGCAGAGCGCATTC | + |
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Preference number: 4 (lower is better) Translates to: VMMFETSHGDAENTVVLKKWPSS*SQQSAF Trigger: GAATGCGCTCTGCTGAGAGCAGGAAGAAGGCCATTT...TTTAAGAACCACTGTGTTCTCTGCATCTCCATGGCTGGTTTCAAACATCATAAC 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000209005.4 ENSMUST00000216688.3 ENSMUST00000217061.3 |
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| CDS-3UTR GCA 90 bp | GTTATGATGTTTGAAACCAGCCATGGAGATGCAGAGAACACAGTGGTTCTTAAAAGTGGTAAGGTGGGATaGACAGGTGGAAATGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: VMMFETSHGDAENTVVLKSGKVG*TGGNGL Trigger: AAGGCCATTTCCACCTGTGCATCCCACCTTACCACT...TTTAAGAACCACTGTGTTCTCTGCATCTCCATGGCTGGTTTCAAACATCATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209005.4 ENSMUST00000216688.3 ENSMUST00000217061.3 |
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| CDS-3UTR TCA 90 bp | AGACTATTGTGTATCAGTAACGTAAAACCACTCTCCTGTCCTATTTTGAATCCTCTTGGGAGTGACAGCTaGGGCATAAACACAGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: RLLCISNVKPLSCPILNPLGSDS*GINTVH Trigger: GTGGACTGTGTTTATGCCTCAGCTGTCACTCCCAAG...AGGATTCAAAATAGGACAGGAGAGTGGTTTTACGTTACTGATACACAATAGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000209005.4 ENSMUST00000216688.3 ENSMUST00000217061.3 |
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| CDS-3UTR TCA 90 bp | AGACTATTGTGTATCAGTAACGTAAAACCACTCTCCTGTCCTATTTTGAATCCTCCATCACCTTGGGAGTaGCAGCTGAGGCATAAACAC | + |
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Preference number: 4 (lower is better) Translates to: RLLCISNVKPLSCPILNPPSPWE*QLRHKH Trigger: GTGTTTATGCCTCAGCTGTCACTCCCAAGGTGATGG...AGGATTCAAAATAGGACAGGAGAGTGGTTTTACGTTACTGATACACAATAGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000209005.4 ENSMUST00000216688.3 ENSMUST00000217061.3 |
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| CDS-3UTR GCA 90 bp | AGACTATTGTGTATCAGTAACGTAAAACCACTCTCCTGTCCTATTTTGAATCCTAAATGGCCTTCTTCCTaGTCTCAGCAGAGCGCATTC | + |
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Preference number: 4 (lower is better) Translates to: RLLCISNVKPLSCPILNPKWPSS*SQQSAF Trigger: GAATGCGCTCTGCTGAGAGCAGGAAGAAGGCCATTT...AGGATTCAAAATAGGACAGGAGAGTGGTTTTACGTTACTGATACACAATAGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000209005.4 ENSMUST00000216688.3 ENSMUST00000217061.3 |
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| CDS-3UTR CCA 90 bp | ATGTTTGAAACCAGCCATGGAGATGCAGAGAACACAGTGGTTCTTAAATTCCCTCATTTGTGTGAATACTaGAGCAAGAAAGGGCTAATA | + |
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Preference number: 4 (lower is better) Translates to: MFETSHGDAENTVVLKFPHLCEY*SKKGLI Trigger: TATTAGCCCTTTCTTGCTCCAGTATTCACACAAATG...AGGGAATTTAAGAACCACTGTGTTCTCTGCATCTCCATGGCTGGTTTCAAACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209005.4 ENSMUST00000216688.3 ENSMUST00000217061.3 |
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| CDS-3UTR CCA 90 bp | AGTCAACCTAGAGAGCATGCCAACAACATAGAGATAAAACAATTTGATGCAAGTCATTTGTGTGAATACTaGAGCAAGAAAGGGCTAATA | + |
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Preference number: 4 (lower is better) Translates to: SQPREHANNIEIKQFDASHLCEY*SKKGLI Trigger: TATTAGCCCTTTCTTGCTCCAGTATTCACACAAATG...ACTTGCATCAAATTGTTTTATCTCTATGTTGTTGGCATGCTCTCTAGGTTGACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217061.3 |
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| CDS-3UTR CAA 90 bp | ATGTTTGAAACCAGCCATGGAGATGCAGAGAACACAGTGGTTCTTAAATTCCCTTTTCCAGCAACCTTCTaGAATGCATTCTTGACTTCT | + |
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Preference number: 5 (lower is better) Translates to: MFETSHGDAENTVVLKFPFPATF*NAFLTS Trigger: AGAAGTCAAGAATGCATTCAAGAAGGTTGCTGGAAA...AGGGAATTTAAGAACCACTGTGTTCTCTGCATCTCCATGGCTGGTTTCAAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209005.4 ENSMUST00000216688.3 ENSMUST00000217061.3 |
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| CDS-3UTR CAA 90 bp | ATGTTTGAAACCAGCCATGGAGATGCAGAGAACACAGTGGTTCTTAAATTCCCTAGAGTAAAAGCAACATaGAATGCTGCCAACATAAAG | + |
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Preference number: 5 (lower is better) Translates to: MFETSHGDAENTVVLKFPRVKAT*NAANIK Trigger: CTTTATGTTGGCAGCATTCAATGTTGCTTTTACTCT...AGGGAATTTAAGAACCACTGTGTTCTCTGCATCTCCATGGCTGGTTTCAAACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209005.4 ENSMUST00000216688.3 ENSMUST00000217061.3 |
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| CDS-3UTR CAA 90 bp | GTTATGATGTTTGAAACCAGCCATGGAGATGCAGAGAACACAGTGGTTCTTAAAAGAGTAAAAGCAACATaGAATGCTGCCAACATAAAG | + |
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Preference number: 5 (lower is better) Translates to: VMMFETSHGDAENTVVLKRVKAT*NAANIK Trigger: CTTTATGTTGGCAGCATTCAATGTTGCTTTTACTCT...TTTAAGAACCACTGTGTTCTCTGCATCTCCATGGCTGGTTTCAAACATCATAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000209005.4 ENSMUST00000216688.3 ENSMUST00000217061.3 |
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| CDS-3UTR CAA 90 bp | AGTCAACCTAGAGAGCATGCCAACAACATAGAGATAAAACAATTTGATGCAAGTTTTCCAGCAACCTTCTaGAATGCATTCTTGACTTCT | + |
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Preference number: 5 (lower is better) Translates to: SQPREHANNIEIKQFDASFPATF*NAFLTS Trigger: AGAAGTCAAGAATGCATTCAAGAAGGTTGCTGGAAA...ACTTGCATCAAATTGTTTTATCTCTATGTTGTTGGCATGCTCTCTAGGTTGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217061.3 |
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| CDS-3UTR CAA 90 bp | AGACTATTGTGTATCAGTAACGTAAAACCACTCTCCTGTCCTATTTTGAATCCTAGAGTAAAAGCAACATaGAATGCTGCCAACATAAAG | + |
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Preference number: 5 (lower is better) Translates to: RLLCISNVKPLSCPILNPRVKAT*NAANIK Trigger: CTTTATGTTGGCAGCATTCAATGTTGCTTTTACTCT...AGGATTCAAAATAGGACAGGAGAGTGGTTTTACGTTACTGATACACAATAGTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000209005.4 ENSMUST00000216688.3 ENSMUST00000217061.3 |
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