Pregenerated sensors for OLFR1474 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096273Ensembl transcript IDs: ENSMUST00000096202.2, ENSMUST00000207529.2, ENSMUST00000220113.2
Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS TCA 90 bp | CTTACTTCCTGTGAGAAACCCTTCTATCACCTTGGGGGTGATTGCTaGGGCATAAACACAGTCCACCACCGAGAGATTACAGAGGAAAAA | + |
Preference number: 5 (lower is better) Translates to: LTSCEKPFYHLGGDC*GINTVHHREITEEK Trigger: TTTTTCCTCTGTAATCTCTCGGTGGTGGACTGTGTTTATGCCTCAGCAATCACCCCCAAGGTGATAGAAGGGTTTCTCACAGGAAGTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096202.2 ENSMUST00000207529.2 ENSMUST00000220113.2 |
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CDS TCA 72 bp | TGTGAGAAACCCTTCTATCACCTTGGGGGTGATTGCTaGGGCATAAACACAGTCCACCACCGAGAGATTACA | + |
Preference number: 6 (lower is better) Translates to: CEKPFYHLGGDC*GINTVHHREIT Trigger: TGTAATCTCTCGGTGGTGGACTGTGTTTATGCCTCAGCAATCACCCCCAAGGTGATAGAAGGGTTTCTCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096202.2 ENSMUST00000207529.2 ENSMUST00000220113.2 |
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CDS CCA 72 bp | AATGTAGCCAAGACGAGCAGTGTAATCTCATTTGTGTaGGTGTCAGAACAAGAAATGTCTAGCAGTGGGGGA | + |
Preference number: 6 (lower is better) Translates to: NVAKTSSVISFV*VSEQEMSSSGG Trigger: TCCCCCACTGCTAGACATTTCTTGTTCTGACACCCACACAAATGAGATTACACTGCTCGTCTTGGCTACATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096202.2 ENSMUST00000220113.2 |