Pregenerated sensors for OLFR147 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049098Ensembl transcript IDs: ENSMUST00000214648.3
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATGACAAGGTTCCAGGAGGCTGTTTTTGTGAAACTCTTTGCCTCATaGCTGTTTTCAGGCTTTAGTCCTACCAAGCAGACTGCACTGGAG | + |
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Preference number: 1 (lower is better) Translates to: MTRFQEAVFVKLFAS*LFSGFSPTKQTALE Trigger: CTCCAGTGCAGTCTGCTTGGTAGGACTAAAGCCTGAAAACAGTCATGAGGCAAAGAGTTTCACAAAAACAGCCTCCTGGAACCTTGTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| 3UTR TCA 90 bp | ATTTTTCAGCTGAAGTTCCAGAATGTCCCACTTCGTCGTAGCTACTaGTCACAGAAGAACTCTAAAGATGAGTGGAAACACAATGATTAC | + |
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Preference number: 1 (lower is better) Translates to: IFQLKFQNVPLRRSY*SQKNSKDEWKHNDY Trigger: GTAATCATTGTGTTTCCACTCATCTTTAGAGTTCTTCTGTGATCAGTAGCTACGACGAAGTGGGACATTCTGGAACTTCAGCTGAAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| 3UTR TCA 90 bp | CTAATTAGTTTCACTGTCTCTACTAGAAGTGAATTTGAATGTTACTaGATAGGTAACATTCTTACTGAATTCCAAGCTCAGGGTCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: LISFTVSTRSEFECY*IGNILTEFQAQGLL Trigger: AAGCAGACCCTGAGCTTGGAATTCAGTAAGAATGTTACCTATTCAGTAACATTCAAATTCACTTCTAGTAGAGACAGTGAAACTAATTAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| 3UTR CAA 90 bp | CCAGGGGAATTCCCTTCCAATAACTCTTTCAAGCAACCCACCTATTaGCAAGGCCATGGGGTATTCCTGTGTTTGGGTGTAACTCGGCTA | + |
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Preference number: 2 (lower is better) Translates to: PGEFPSNNSFKQPTY*QGHGVFLCLGVTRL Trigger: TAGCCGAGTTACACCCAAACACAGGAATACCCCATGGCCTTGCAAATAGGTGGGTTGCTTGAAAGAGTTATTGGAAGGGAATTCCCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| 3UTR-3UTR TCA 90 bp | GTAGTCTGTGGCAGAGATAGGAAGAGTTTCTTCATTTGGCTTGCAAGTGTTTGCTGGGATGTGCAGATATaGGAATCCCTAGAAGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: VVCGRDRKSFFIWLASVCWDVQI*ESLEAH Trigger: GTGAGCTTCTAGGGATTCTCATATCTGCACATCCCA...GCAAACACTTGCAAGCCAAATGAAGAAACTCTTCCTATCTCTGCCACAGACTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| 3UTR-3UTR GCA 90 bp | GCAGTCCCAAATTCTCAAACCAAGGATCATTTCCTAACTCTACAGGCAGCAAAACAGGTCGGTTCTTCTTaGTGTAGTCTGTGGCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: AVPNSQTKDHFLTLQAAKQVGSS*CSLWQR Trigger: TCTCTGCCACAGACTACAGCAAGAAGAACCGACCTG...TTTTGCTGCCTGTAGAGTTAGGAAATGATCCTTGGTTTGAGAATTTGGGACTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| 3UTR-3UTR GCA 90 bp | GTAGTCTGTGGCAGAGATAGGAAGAGTTTCTTCATTTGGCTTGCAAGTGTTTGCATTCCTCCTTCTCTGTaGACTCAGTACAGCTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: VVCGRDRKSFFIWLASVCIPPSL*TQYSFP Trigger: AGGAAAGCTGTACTGAGTGCACAGAGAAGGAGGAAT...GCAAACACTTGCAAGCCAAATGAAGAAACTCTTCCTATCTCTGCCACAGACTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| 3UTR-3UTR GCA 90 bp | GCAGTCCCAAATTCTCAAACCAAGGATCATTTCCTAACTCTACAGGCAGCAAAACATGATCTGCCTTCTTaGTGTCTTCTACACAACTCC | + |
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Preference number: 2 (lower is better) Translates to: AVPNSQTKDHFLTLQAAKHDLPS*CLLHNS Trigger: GGAGTTGTGTAGAAGACAGCAAGAAGGCAGATCATG...TTTTGCTGCCTGTAGAGTTAGGAAATGATCCTTGGTTTGAGAATTTGGGACTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| 3UTR-3UTR TCA 90 bp | GTAGTCTGTGGCAGAGATAGGAAGAGTTTCTTCATTTGGCTTGCAAGTGTTTGCCTTTTCTTTTTGAGGTaGGAAATGGCCAAGGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: VVCGRDRKSFFIWLASVCLFFLR*EMAKER Trigger: TCTTTCCTTGGCCATTTCTCACCTCAAAAAGAAAAG...GCAAACACTTGCAAGCCAAATGAAGAAACTCTTCCTATCTCTGCCACAGACTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| 3UTR-3UTR GCA 90 bp | GCAGTCCCAAATTCTCAAACCAAGGATCATTTCCTAACTCTACAGGCAGCAAAATGCACTATGGTAGCATaGTTTGAGCAACTAGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: AVPNSQTKDHFLTLQAAKCTMVA*FEQLEK Trigger: CTTCTCTAGTTGCTCAAAGCATGCTACCATAGTGCA...TTTTGCTGCCTGTAGAGTTAGGAAATGATCCTTGGTTTGAGAATTTGGGACTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| 3UTR-3UTR TCA 90 bp | GCAGTCCCAAATTCTCAAACCAAGGATCATTTCCTAACTCTACAGGCAGCAAAAGATGTCCTCAAGAATTaGCACCATTATGTGGAAACA | + |
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Preference number: 2 (lower is better) Translates to: AVPNSQTKDHFLTLQAAKDVLKN*HHYVET Trigger: TGTTTCCACATAATGGTGTCAATTCTTGAGGACATC...TTTTGCTGCCTGTAGAGTTAGGAAATGATCCTTGGTTTGAGAATTTGGGACTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| 3UTR-3UTR GCA 90 bp | GCAGTCCCAAATTCTCAAACCAAGGATCATTTCCTAACTCTACAGGCAGCAAAAACCATATACATGATCTaGCTTCTTGCTGTCTTCTAC | + |
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Preference number: 2 (lower is better) Translates to: AVPNSQTKDHFLTLQAAKTIYMI*LLAVFY Trigger: GTAGAAGACAGCAAGAAGGCAGATCATGTATATGGT...TTTTGCTGCCTGTAGAGTTAGGAAATGATCCTTGGTTTGAGAATTTGGGACTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| 3UTR-3UTR TCA 90 bp | GCAGTCCCAAATTCTCAAACCAAGGATCATTTCCTAACTCTACAGGCAGCAAAACCCATATTAAGTATCTaGACAGTATTTTGCCATGTG | + |
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Preference number: 2 (lower is better) Translates to: AVPNSQTKDHFLTLQAAKPILSI*TVFCHV Trigger: CACATGGCAAAATACTGTTCAGATACTTAATATGGG...TTTTGCTGCCTGTAGAGTTAGGAAATGATCCTTGGTTTGAGAATTTGGGACTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| 3UTR-3UTR CCA 90 bp | GCAGTCCCAAATTCTCAAACCAAGGATCATTTCCTAACTCTACAGGCAGCAAAACCATGTGCCAATAAGTaGATCCTTTCACTTTACTTA | + |
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Preference number: 2 (lower is better) Translates to: AVPNSQTKDHFLTLQAAKPCANK*ILSLYL Trigger: TAAGTAAAGTGAAAGGATCCACTTATTGGCACATGG...TTTTGCTGCCTGTAGAGTTAGGAAATGATCCTTGGTTTGAGAATTTGGGACTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| 3UTR-3UTR GCA 90 bp | GCCTTTCTAGTTATATTCTGCCCTATTGCTAAAACTACTTCTAAAGCATTCATCAACCTTTTCAAAGTTTaGAGTCCCAAATTCTCAAAC | + |
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Preference number: 2 (lower is better) Translates to: AFLVIFCPIAKTTSKAFINLFKV*SPKFSN Trigger: GTTTGAGAATTTGGGACTGCAAACTTTGAAAAGGTT...GATGAATGCTTTAGAAGTAGTTTTAGCAATAGGGCAGAATATAACTAGAAAGGC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| 3UTR GCA 72 bp | TGCAAGTGTTTGCTCTCCCCGATTCCTCCTTCTCTGTaGACTCAGTACAGCTTTCCTGTCACCACTGTCAGG | + |
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Preference number: 3 (lower is better) Translates to: CKCLLSPIPPSL*TQYSFPVTTVR Trigger: CCTGACAGTGGTGACAGGAAAGCTGTACTGAGTGCACAGAGAAGGAGGAATCGGGGAGAGCAAACACTTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| 3UTR CCA 72 bp | GGGAACTCACAGGTCAGCTTGTCACAGGAATCATTCTaGAAGCTAGCAAGCTCCTGCAACATTCTGTGCAAA | + |
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Preference number: 3 (lower is better) Translates to: GNSQVSLSQESF*KLASSCNILCK Trigger: TTTGCACAGAATGTTGCAGGAGCTTGCTAGCTTCCAGAATGATTCCTGTGACAAGCTGACCTGTGAGTTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| 3UTR TCA 72 bp | TCTGTAATTCTGGTGAACCTGTGGGATGTGCAGATATaGGAATCCCTAGAAGCTCACATCCCAGCTAGCCTA | + |
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Preference number: 3 (lower is better) Translates to: SVILVNLWDVQI*ESLEAHIPASL Trigger: TAGGCTAGCTGGGATGTGAGCTTCTAGGGATTCTCATATCTGCACATCCCACAGGTTCACCAGAATTACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| 3UTR TCA 72 bp | CTGAAGTTCCAGAATGTCCCACTTCGTCGTAGCTACTaGTCACAGAAGAACTCTAAAGATGAGTGGAAACAC | + |
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Preference number: 3 (lower is better) Translates to: LKFQNVPLRRSY*SQKNSKDEWKH Trigger: GTGTTTCCACTCATCTTTAGAGTTCTTCTGTGATCAGTAGCTACGACGAAGTGGGACATTCTGGAACTTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| 3UTR GCA 72 bp | TTACTGAATTCCAAGCTCAGGGTCTGCTTCAAGTGTTaGCTAGGACATTGGAACATTGATGGAGGCTTAACT | + |
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Preference number: 3 (lower is better) Translates to: LLNSKLRVCFKC*LGHWNIDGGLT Trigger: AGTTAAGCCTCCATCAATGTTCCAATGTCCTAGGCAACACTTGAAGCAGACCCTGAGCTTGGAATTCAGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| 3UTR TCA 72 bp | ATAAAAAGATGTCGGGGATCAGGCCGTATTTACCACTaGGAATGGAGCCAGGTGAATGTAATGCTAGTCTAT | + |
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Preference number: 3 (lower is better) Translates to: IKRCRGSGRIYH*EWSQVNVMLVY Trigger: ATAGACTAGCATTACATTCACCTGGCTCCATTCTCAGTGGTAAATACGGCCTGATCCCCGACATCTTTTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| 3UTR CCA 72 bp | TTTACAGCTATAGGGGAGTTGTATAGTTGGCCTGAATaGCCAAAAACTGTCTCTGATGAAAGCATCTTGTCC | + |
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Preference number: 3 (lower is better) Translates to: FTAIGELYSWPE*PKTVSDESILS Trigger: GGACAAGATGCTTTCATCAGAGACAGTTTTTGGCCATTCAGGCCAACTATACAACTCCCCTATAGCTGTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| 3UTR TCA 72 bp | ACACAAACATGCCACCTCTTCCCCATATTAAGTATCTaGACAGTATTTTGCCATGTGCCAATAAGTGGATCC | + |
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Preference number: 3 (lower is better) Translates to: TQTCHLFPILSI*TVFCHVPISGS Trigger: GGATCCACTTATTGGCACATGGCAAAATACTGTTCAGATACTTAATATGGGGAAGAGGTGGCATGTTTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| 3UTR CCA 72 bp | AAGCTCAGGGTCTGCTTCAAGTGTTGCCTAGGACATTaGAACATTGATGGAGGCTTAACTATGTCAAAATTA | + |
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Preference number: 3 (lower is better) Translates to: KLRVCFKCCLGH*NIDGGLTMSKL Trigger: TAATTTTGACATAGTTAAGCCTCCATCAATGTTCCAATGTCCTAGGCAACACTTGAAGCAGACCCTGAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| 3UTR-3UTR CAA 90 bp | GCAGTCCCAAATTCTCAAACCAAGGATCATTTCCTAACTCTACAGGCAGCAAAATGTTTTTATTTTAAGTaGGCACCAGGTCGGTTCTTC | + |
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Preference number: 3 (lower is better) Translates to: AVPNSQTKDHFLTLQAAKCFYFK*APGRFF Trigger: GAAGAACCGACCTGGTGCCAACTTAAAATAAAAACA...TTTTGCTGCCTGTAGAGTTAGGAAATGATCCTTGGTTTGAGAATTTGGGACTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| 3UTR-3UTR CAA 90 bp | GCCTTTCTAGTTATATTCTGCCCTATTGCTAAAACTACTTCTAAAGCATTCATCTATCTGAACAGTATTTaGCCATGTGCCAATAAGTGG | + |
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Preference number: 3 (lower is better) Translates to: AFLVIFCPIAKTTSKAFIYLNSI*PCANKW Trigger: CCACTTATTGGCACATGGCAAAATACTGTTCAGATA...GATGAATGCTTTAGAAGTAGTTTTAGCAATAGGGCAGAATATAACTAGAAAGGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| 3UTR TCA 72 bp | TTCACTGTCTCTACTAGAAGTGAATTTGAATGTTACTaGATAGGTAACATTCTTACTGAATTCCAAGCTCAG | + |
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Preference number: 3 (lower is better) Translates to: FTVSTRSEFECY*IGNILTEFQAQ Trigger: CTGAGCTTGGAATTCAGTAAGAATGTTACCTATTCAGTAACATTCAAATTCACTTCTAGTAGAGACAGTGAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| CDS-3UTR GCA 90 bp | GTAGTCTGTGGCAGAGATAGGAAGAGTTTCTTCATTTGGCTTGCAAGTGTTTGCGAAACAGTTGAGTCATaGACCCCGCATAGGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: VVCGRDRKSFFIWLASVCETVES*TPHRRW Trigger: CCATCTCCTATGCGGGGTGCATGACTCAACTGTTTC...GCAAACACTTGCAAGCCAAATGAAGAAACTCTTCCTATCTCTGCCACAGACTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| 3UTR CAA 72 bp | TTCCCTTCCAATAACTCTTTCAAGCAACCCACCTATTaGCAAGGCCATGGGGTATTCCTGTGTTTGGGTGTA | + |
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Preference number: 4 (lower is better) Translates to: FPSNNSFKQPTY*QGHGVFLCLGV Trigger: TACACCCAAACACAGGAATACCCCATGGCCTTGCAAATAGGTGGGTTGCTTGAAAGAGTTATTGGAAGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| CDS-3UTR TCA 90 bp | TCTGCCTTCTTGCTGTCTTCTACACAACTCCCTATATTTTTGGTAACTTTAATTATGGGGGTGTGCAGGTaGGGATTGAGGCCAATCAGG | + |
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Preference number: 4 (lower is better) Translates to: SAFLLSSTQLPIFLVTLIMGVCR*GLRPIR Trigger: CCTGATTGGCCTCAATCCTCACCTGCACACCCCCAT...AATTAAAGTTACCAAAAATATAGGGAGTTGTGTAGAAGACAGCAAGAAGGCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| CDS-3UTR TCA 90 bp | GCCTTTCTAGTTATATTCTGCCCTATTGCTAAAACTACTTCTAAAGCATTCATCTGCAGAAGGTCAGTCTaGGCATACAGCCTGTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: AFLVIFCPIAKTTSKAFICRRSV*AYSLCG Trigger: CCCACACAGGCTGTATGCTCAGACTGACCTTCTGCA...GATGAATGCTTTAGAAGTAGTTTTAGCAATAGGGCAGAATATAACTAGAAAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| CDS-3UTR TCA 90 bp | CAACTAGAGAAGATTAAAGTAACAGCTAAGGGTGAATCTCCAGTCTTCAAACAAGAGAGCTACAGGTGCTaGAGGCTTTTGCTCTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: QLEKIKVTAKGESPVFKQESYRC*RLLLFL Trigger: AAGGAAGAGCAAAAGCCTTCAGCACCTGTAGCTCTC...TTGTTTGAAGACTGGAGATTCACCCTTAGCTGTTACTTTAATCTTCTCTAGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| CDS-3UTR TCA 90 bp | GCAGTCCCAAATTCTCAAACCAAGGATCATTTCCTAACTCTACAGGCAGCAAAATCCTTAATGCCACCTTaGCATCCTTATTCCTCAAAC | + |
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Preference number: 4 (lower is better) Translates to: AVPNSQTKDHFLTLQAAKSLMPP*HPYSSN Trigger: GTTTGAGGAATAAGGATGTCAAGGTGGCATTAAGGA...TTTTGCTGCCTGTAGAGTTAGGAAATGATCCTTGGTTTGAGAATTTGGGACTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| CDS-3UTR CCA 90 bp | CAACTAGAGAAGATTAAAGTAACAGCTAAGGGTGAATCTCCAGTCTTCAAACAAAGCATACAGCCTGTGTaGGCAGAGGATCCAGCAAAT | + |
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Preference number: 4 (lower is better) Translates to: QLEKIKVTAKGESPVFKQSIQPV*AEDPAN Trigger: ATTTGCTGGATCCTCTGCCCACACAGGCTGTATGCT...TTGTTTGAAGACTGGAGATTCACCCTTAGCTGTTACTTTAATCTTCTCTAGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| CDS-3UTR GCA 90 bp | GTAGTCTGTGGCAGAGATAGGAAGAGTTTCTTCATTTGGCTTGCAAGTGTTTGCAAAGAAAAGAGAAATTaGCATGATGTGAGAGCTACA | + |
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Preference number: 4 (lower is better) Translates to: VVCGRDRKSFFIWLASVCKEKRN*HDVRAT Trigger: TGTAGCTCTCACATCATGGCAATTTCTCTTTTCTTT...GCAAACACTTGCAAGCCAAATGAAGAAACTCTTCCTATCTCTGCCACAGACTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| CDS-3UTR TCA 90 bp | TCTGCCTTCTTGCTGTCTTCTACACAACTCCCTATATTTTTGGTAACTTTAATTAAAGAGAAATTGCCATaGTGTGAGAGCTACAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: SAFLLSSTQLPIFLVTLIKEKLP*CESYRC Trigger: GCACCTGTAGCTCTCACATCATGGCAATTTCTCTTT...AATTAAAGTTACCAAAAATATAGGGAGTTGTGTAGAAGACAGCAAGAAGGCAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| CDS-3UTR TCA 90 bp | CAACTAGAGAAGATTAAAGTAACAGCTAAGGGTGAATCTCCAGTCTTCAAACAATTCCTTGTGTGGATTTaGTGTTTAGAATGTTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: QLEKIKVTAKGESPVFKQFLVWI*CLECWQ Trigger: TTGCCAACATTCTAAACATCAAATCCACACAAGGAA...TTGTTTGAAGACTGGAGATTCACCCTTAGCTGTTACTTTAATCTTCTCTAGTTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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| CDS-3UTR CAA 90 bp | GTAGTCTGTGGCAGAGATAGGAAGAGTTTCTTCATTTGGCTTGCAAGTGTTTGCTTCCTTAATGCCACCTaGACATCCTTATTCCTCAAA | + |
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Preference number: 5 (lower is better) Translates to: VVCGRDRKSFFIWLASVCFLNAT*TSLFLK Trigger: TTTGAGGAATAAGGATGTCAAGGTGGCATTAAGGAA...GCAAACACTTGCAAGCCAAATGAAGAAACTCTTCCTATCTCTGCCACAGACTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214648.3 |
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