Pregenerated sensors for OLFR1459 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057503Ensembl transcript IDs: ENSMUST00000213493.2
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTGCAGGGACAGTGCGCCAAGCTCTCAGGGCTGCTTGTGCTGTCTaGGTGAGGACAACAGGGGAGAGCCCTAATTGTTTTATGTCTGCA | + |
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Preference number: 1 (lower is better) Translates to: AAGTVRQALRAACAV*VRTTGESPNCFMSA Trigger: TGCAGACATAAAACAATTAGGGCTCTCCCCTGTTGTCCTCACCCAGACAGCACAAGCAGCCCTGAGAGCTTGGCGCACTGTCCCTGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR CCA 90 bp | GATGCTCTCCGATTTCTCCTCTTTTGTGTACTCAGCACAGCTTTTTaGTCACCACTGTCAGGGCACTCACAGGTCATAGGTCAGCCTGTC | + |
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Preference number: 1 (lower is better) Translates to: DALRFLLFCVLSTAF*SPLSGHSQVIGQPV Trigger: GACAGGCTGACCTATGACCTGTGAGTGCCCTGACAGTGGTGACCAAAAAGCTGTGCTGAGTACACAAAAGAGGAGAAATCGGAGAGCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR CCA 90 bp | CTAGGAGCCCTTGAAACTGTTTGCCTTCTAGAAACAAAGTCAGCATaGGCCGTGAATCGGTTATTTTCTGTGCCCAGTAGACTTCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: LGALETVCLLETKSA*AVNRLFSVPSRLLR Trigger: CCTCAGAAGTCTACTGGGCACAGAAAATAACCGATTCACGGCCCATGCTGACTTTGTTTCTAGAAGGCAAACAGTTTCAAGGGCTCCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR GCA 90 bp | GTTGTATCAAGACCCCAATGTATTGAGAAAGGTCCAAGGTTTAAATaGACAAGCAAAGGGGGAAGTACAGATACTTATCAGTGGGAGGGG | + |
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Preference number: 1 (lower is better) Translates to: VVSRPQCIEKGPRFK*TSKGGSTDTYQWEG Trigger: CCCCTCCCACTGATAAGTATCTGTACTTCCCCCTTTGCTTGTGCATTTAAACCTTGGACCTTTCTCAATACATTGGGGTCTTGATACAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR CCA 90 bp | ATTTTAAGTTGGCACCAGGTTGGTACTCCTTGCTGCAGCCCATGGTaGAGATATGAAGTTTCTTTATCTGTTTGTAAGTGGATGCTCTCC | + |
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Preference number: 1 (lower is better) Translates to: ILSWHQVGTPCCSPW*RYEVSLSVCKWMLS Trigger: GGAGAGCATCCACTTACAAACAGATAAAGAAACTTCATATCTCCACCATGGGCTGCAGCAAGGAGTACCAACCTGGTGCCAACTTAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR CCA 90 bp | TGTATTTTAAGTTGGCACCAGGTTGGTACTCCTTGCTGCAGCCCATaGTGGAGATATGAAGTTTCTTTATCTGTTTGTAAGTGGATGCTC | + |
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Preference number: 1 (lower is better) Translates to: CILSWHQVGTPCCSP*WRYEVSLSVCKWML Trigger: GAGCATCCACTTACAAACAGATAAAGAAACTTCATATCTCCACCATGGGCTGCAGCAAGGAGTACCAACCTGGTGCCAACTTAAAATACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR GCA 90 bp | GCCCATGGTGGAGATATGAAGTTTCTTTATCTGTTTGTAAGTGGATaGTCTCCGATTTCTCCTCTTTTGTGTACTCAGCACAGCTTTTTG | + |
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Preference number: 1 (lower is better) Translates to: AHGGDMKFLYLFVSG*SPISPLLCTQHSFL Trigger: CAAAAAGCTGTGCTGAGTACACAAAAGAGGAGAAATCGGAGAGCATCCACTTACAAACAGATAAAGAAACTTCATATCTCCACCATGGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR GCA 90 bp | TTAGTTGTTTGTATTTTAAGTTGGCACCAGGTTGGTACTCCTTGCTaGAGCCCATGGTGGAGATATGAAGTTTCTTTATCTGTTTGTAAG | + |
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Preference number: 1 (lower is better) Translates to: LVVCILSWHQVGTPC*SPWWRYEVSLSVCK Trigger: CTTACAAACAGATAAAGAAACTTCATATCTCCACCATGGGCTGCAGCAAGGAGTACCAACCTGGTGCCAACTTAAAATACAAACAACTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR TCA 90 bp | GTTAGAGCAGCCCCAATGGCCAGGTTAATAGACTTAGAAACTTGTTaGGAAAACACATCTACCTCATTACAAAGCTTGATCATACCATTT | + |
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Preference number: 1 (lower is better) Translates to: VRAAPMARLIDLETC*ENTSTSLQSLIIPF Trigger: AAATGGTATGATCAAGCTTTGTAATGAGGTAGATGTGTTTTCTCAACAAGTTTCTAAGTCTATTAACCTGGCCATTGGGGCTGCTCTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR GCA 90 bp | TTTTTAGTTGTTTGTATTTTAAGTTGGCACCAGGTTGGTACTCCTTaGTGCAGCCCATGGTGGAGATATGAAGTTTCTTTATCTGTTTGT | + |
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Preference number: 1 (lower is better) Translates to: FLVVCILSWHQVGTP*CSPWWRYEVSLSVC Trigger: ACAAACAGATAAAGAAACTTCATATCTCCACCATGGGCTGCAGCAAGGAGTACCAACCTGGTGCCAACTTAAAATACAAACAACTAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGCCCAACACACAACTTCTTACCCCAGAGAGTTCTGTCAAGGTAAGCTGAACGCTGCTTGTGCTGTCTaGGTGAGGACAACAGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: WAQHTTSYPREFCQGKLNAACAV*VRTTGE Trigger: CTCCCCTGTTGTCCTCACCCAGACAGCACAAGCAGC...GTTCAGCTTACCTTGACAGAACTCTCTGGGGTAAGAAGTTGTGTGTTGGGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCTTTCTTTTGACAGCTACACGGGGAAGCAGGAACTTGGTGGTGTCAGGGTGAAGTTGGCACCAGGTTaGTACTCCTTGCTGCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: ILSFDSYTGKQELGGVRVKLAPG*YSLLQP Trigger: GGGCTGCAGCAAGGAGTACCAACCTGGTGCCAACTT...CACCCTGACACCACCAAGTTCCTGCTTCCCCGTGTAGCTGTCAAAAGAAAGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR CAA 90 bp | GGATGCTCTCCGATTTCTCCTCTTTTGTGTACTCAGCACAGCTTTTaGGTCACCACTGTCAGGGCACTCACAGGTCATAGGTCAGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: GCSPISPLLCTQHSF*VTTVRALTGHRSAC Trigger: ACAGGCTGACCTATGACCTGTGAGTGCCCTGACAGTGGTGACCAAAAAGCTGTGCTGAGTACACAAAAGAGGAGAAATCGGAGAGCATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCTTTCTTTTGACAGCTACACGGGGAAGCAGGAACTTGGTGGTGTCAGGGTGGGCCATGTACAGGATTaGCTCTCAGGCCCACAGATT | + |
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Preference number: 2 (lower is better) Translates to: ILSFDSYTGKQELGGVRVGHVQD*LSGPQI Trigger: AATCTGTGGGCCTGAGAGTCAATCCTGTACATGGCC...CACCCTGACACCACCAAGTTCCTGCTTCCCCGTGTAGCTGTCAAAAGAAAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR-3UTR GCA 90 bp | ATTCTTTCTTTTGACAGCTACACGGGGAAGCAGGAACTTGGTGGTGTCAGGGTGTTTTCCGCCCTTTTCTaGCTGCTCAAGGAGGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: ILSFDSYTGKQELGGVRVFSALF*LLKEVS Trigger: AGAGACCTCCTTGAGCAGGCAGAAAAGGGCGGAAAA...CACCCTGACACCACCAAGTTCCTGCTTCCCCGTGTAGCTGTCAAAAGAAAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR-3UTR CCA 90 bp | AGGTCCCAAAATTTTCTCAGCTGCTTCCTGCAATCTGGCAACGAACTGCGCATAACCCTCTTTTCTTCTTaGGGGGAGAGGCCCAATTCA | + |
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Preference number: 2 (lower is better) Translates to: RSQNFLSCFLQSGNELRITLFSS*GERPNS Trigger: TGAATTGGGCCTCTCCCCCCAAGAAGAAAAGAGGGT...TATGCGCAGTTCGTTGCCAGATTGCAGGAAGCAGCTGAGAAAATTTTGGGACCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR-3UTR GCA 90 bp | ATTCTTTCTTTTGACAGCTACACGGGGAAGCAGGAACTTGGTGGTGTCAGGGTGTCTCAGCCTCTGTTGTaGAAACAGAGTGATTCAGCA | + |
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Preference number: 2 (lower is better) Translates to: ILSFDSYTGKQELGGVRVSQPLL*KQSDSA Trigger: TGCTGAATCACTCTGTTTGCACAACAGAGGCTGAGA...CACCCTGACACCACCAAGTTCCTGCTTCCCCGTGTAGCTGTCAAAAGAAAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR-3UTR CCA 90 bp | AACTTCCTTAGGCACTGTTTGCAAAATAAAAGAAGGCTACAAGCTTCTCTGGGCCAGCGGAAGCATGCCTaGGCCCAACACACAACTTCT | + |
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Preference number: 2 (lower is better) Translates to: NFLRHCLQNKRRLQASLGQRKHA*AQHTTS Trigger: AGAAGTTGTGTGTTGGGCCCAGGCATGCTTCCGCTG...GCCCAGAGAAGCTTGTAGCCTTCTTTTATTTTGCAAACAGTGCCTAAGGAAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTATGTCTGCAGCGAAATTGCCTTAACCACAGATTTTGTCAGCAGTCTAGGATCCGTGGCCCGCTTTTaGCCCTCTTTTCTTCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: FYVCSEIALTTDFVSSLGSVARF*PSFLLG Trigger: CCCAAGAAGAAAAGAGGGTCAAAAGCGGGCCACGGA...TCCTAGACTGCTGACAAAATCTGTGGTTAAGGCAATTTCGCTGCAGACATAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR-3UTR GCA 90 bp | AGTATCTTTAGAGGACTAGTTTTCTGGACTGGTTTATGCCAGGTGCTTTTGTTTCCGCCCTTTTCTGCCTaGTCAAGGAGGTCTCTGATG | + |
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Preference number: 2 (lower is better) Translates to: SIFRGLVFWTGLCQVLLFPPFSA*SRRSLM Trigger: CATCAGAGACCTCCTTGAGCAGGCAGAAAAGGGCGG...AAACAAAAGCACCTGGCATAAACCAGTCCAGAAAACTAGTCCTCTAAAGATACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR-3UTR GCA 90 bp | CATCTGCCGCGGTATCTAGGAGCCCTTGAAACTGTTTGCCTTCTAGAAACAAAGCAAAATTTTCTCAGCTaGTTCCTGCAATCTGGCAAC | + |
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Preference number: 2 (lower is better) Translates to: HLPRYLGALETVCLLETKQNFLS*FLQSGN Trigger: GTTGCCAGATTGCAGGAAGCAGCTGAGAAAATTTTG...CTTTGTTTCTAGAAGGCAAACAGTTTCAAGGGCTCCTAGATACCGCGGCAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGCCCAACACACAACTTCTTACCCCAGAGAGTTCTGTCAAGGTAAGCTGAACGCCCTTGAAACTGTTTaGCTTCTAGAAACAAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: WAQHTTSYPREFCQGKLNALETV*LLETKS Trigger: TGACTTTGTTTCTAGAAGGCAAACAGTTTCAAGGGC...GTTCAGCTTACCTTGACAGAACTCTCTGGGGTAAGAAGTTGTGTGTTGGGCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR-3UTR GCA 90 bp | ATTCTTTCTTTTGACAGCTACACGGGGAAGCAGGAACTTGGTGGTGTCAGGGTGTTCTGGACTGGTTTATaGCAGGTGCTTTTGTTTGAA | + |
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Preference number: 2 (lower is better) Translates to: ILSFDSYTGKQELGGVRVFWTGL*QVLLFE Trigger: TTCAAACAAAAGCACCTGGCATAAACCAGTCCAGAA...CACCCTGACACCACCAAGTTCCTGCTTCCCCGTGTAGCTGTCAAAAGAAAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCAATGTATTGAGAAAGGTCCAAGGTTTAAATGCACAAGCAAAGGGGGAAGTCCTTGCTGCAGCCCATaGTGGAGATATGAAGTTTCT | + |
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Preference number: 2 (lower is better) Translates to: PQCIEKGPRFKCTSKGGSPCCSP*WRYEVS Trigger: AGAAACTTCATATCTCCACCATGGGCTGCAGCAAGG...ACTTCCCCCTTTGCTTGTGCATTTAAACCTTGGACCTTTCTCAATACATTGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR CAA 90 bp | TTTCTTTATCTGTTTGTAAGTGGATGCTCTCCGATTTCTCCTCTTTaGTGTACTCAGCACAGCTTTTTGGTCACCACTGTCAGGGCACTC | + |
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Preference number: 2 (lower is better) Translates to: FLYLFVSGCSPISPL*CTQHSFLVTTVRAL Trigger: GAGTGCCCTGACAGTGGTGACCAAAAAGCTGTGCTGAGTACACAAAAGAGGAGAAATCGGAGAGCATCCACTTACAAACAGATAAAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCAATGTATTGAGAAAGGTCCAAGGTTTAAATGCACAAGCAAAGGGGGAAGTGTATCTAGGAGCCCTTaGAACTGTTTGCCTTCTAGA | + |
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Preference number: 2 (lower is better) Translates to: PQCIEKGPRFKCTSKGGSVSRSP*NCLPSR Trigger: TCTAGAAGGCAAACAGTTTCAAGGGCTCCTAGATAC...ACTTCCCCCTTTGCTTGTGCATTTAAACCTTGGACCTTTCTCAATACATTGGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCAATGTATTGAGAAAGGTCCAAGGTTTAAATGCACAAGCAAAGGGGGAAGTTGTTTGCTCACCGGATaGTTCTCTAAAACCACGAAG | + |
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Preference number: 2 (lower is better) Translates to: PQCIEKGPRFKCTSKGGSCLLTG*FSKTTK Trigger: CTTCGTGGTTTTAGAGAATCATCCGGTGAGCAAACA...ACTTCCCCCTTTGCTTGTGCATTTAAACCTTGGACCTTTCTCAATACATTGGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR-3UTR GCA 90 bp | ATTCTTTCTTTTGACAGCTACACGGGGAAGCAGGAACTTGGTGGTGTCAGGGTGTCCTTAGGCACTGTTTaGAAAATAAAAGAAGGCTAC | + |
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Preference number: 2 (lower is better) Translates to: ILSFDSYTGKQELGGVRVSLGTV*KIKEGY Trigger: GTAGCCTTCTTTTATTTTGCAAACAGTGCCTAAGGA...CACCCTGACACCACCAAGTTCCTGCTTCCCCGTGTAGCTGTCAAAAGAAAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCAATGTATTGAGAAAGGTCCAAGGTTTAAATGCACAAGCAAAGGGGGAAGTCATTGGAAGCTAGCATaGTCTTGTAGCATTCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: PQCIEKGPRFKCTSKGGSHWKLA*SCSILW Trigger: CCACAGAATGCTACAAGAGCATGCTAGCTTCCAATG...ACTTCCCCCTTTGCTTGTGCATTTAAACCTTGGACCTTTCTCAATACATTGGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCTTTCTTTTGACAGCTACACGGGGAAGCAGGAACTTGGTGGTGTCAGGGTGTTTCAAGTTAAATATTaGCCTCTAGTGAGGACAGAC | + |
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Preference number: 2 (lower is better) Translates to: ILSFDSYTGKQELGGVRVFQVKY*PLVRTD Trigger: GTCTGTCCTCACTAGAGGCCAATATTTAACTTGAAA...CACCCTGACACCACCAAGTTCCTGCTTCCCCGTGTAGCTGTCAAAAGAAAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR-3UTR TCA 90 bp | CATCTGCCGCGGTATCTAGGAGCCCTTGAAACTGTTTGCCTTCTAGAAACAAAGTTAGTTTTGCTTTTGTaGGATGGCAATTGGGAGTTT | + |
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Preference number: 2 (lower is better) Translates to: HLPRYLGALETVCLLETKLVLLL*DGNWEF Trigger: AAACTCCCAATTGCCATCTCACAAAAGCAAAACTAA...CTTTGTTTCTAGAAGGCAAACAGTTTCAAGGGCTCCTAGATACCGCGGCAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCAATGTATTGAGAAAGGTCCAAGGTTTAAATGCACAAGCAAAGGGGGAAGTGTCATCTATGAGGCTTaGATTAATGGTCCCAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: PQCIEKGPRFKCTSKGGSVIYEA*INGPSL Trigger: AAGACTGGGACCATTAATTCAAGCCTCATAGATGAC...ACTTCCCCCTTTGCTTGTGCATTTAAACCTTGGACCTTTCTCAATACATTGGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR-3UTR GCA 90 bp | ATTCTTTCTTTTGACAGCTACACGGGGAAGCAGGAACTTGGTGGTGTCAGGGTGTTGTATGCACCTGCTTaGATAGATTGGTATTTATGT | + |
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Preference number: 2 (lower is better) Translates to: ILSFDSYTGKQELGGVRVLYAPA*IDWYLC Trigger: ACATAAATACCAATCTATGCAAGCAGGTGCATACAA...CACCCTGACACCACCAAGTTCCTGCTTCCCCGTGTAGCTGTCAAAAGAAAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR-3UTR GCA 90 bp | AGTATCTTTAGAGGACTAGTTTTCTGGACTGGTTTATGCCAGGTGCTTTTGTTTTTCTCAGCTGCTTCCTaGAATCTGGCAACGAACTGC | + |
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Preference number: 2 (lower is better) Translates to: SIFRGLVFWTGLCQVLLFFSAAS*NLATNC Trigger: GCAGTTCGTTGCCAGATTGCAGGAAGCAGCTGAGAA...AAACAAAAGCACCTGGCATAAACCAGTCCAGAAAACTAGTCCTCTAAAGATACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR CAA 90 bp | AGACGAGGGTCTTGTACGAATAACGACACGGAAACCGTTCTGAAGTaGTATCAAGACCCCAATGTATTGAGAAAGGTCCAAGGTTTAAAT | + |
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Preference number: 2 (lower is better) Translates to: RRGSCTNNDTETVLK*YQDPNVLRKVQGLN Trigger: ATTTAAACCTTGGACCTTTCTCAATACATTGGGGTCTTGATACAACTTCAGAACGGTTTCCGTGTCGTTATTCGTACAAGACCCTCGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR CAA 90 bp | GGTCTGCTCAAGGACTTTCTAGGACAGTGGAACACCGGTCAAGGCTaGGCTATGTCTAAAATTTCTACCTTTCTAGCCTTAATATATGTT | + |
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Preference number: 2 (lower is better) Translates to: GLLKDFLGQWNTGQG*AMSKISTFLALIYV Trigger: AACATATATTAAGGCTAGAAAGGTAGAAATTTTAGACATAGCCAAGCCTTGACCGGTGTTCCACTGTCCTAGAAAGTCCTTGAGCAGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR-3UTR CCA 90 bp | AACTTCCTTAGGCACTGTTTGCAAAATAAAAGAAGGCTACAAGCTTCTCTGGGCGCAAGCTGCAGTCAATaGAACACTGGCAATTTTAAC | + |
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Preference number: 2 (lower is better) Translates to: NFLRHCLQNKRRLQASLGASCSQ*NTGNFN Trigger: GTTAAAATTGCCAGTGTTCCATTGACTGCAGCTTGC...GCCCAGAGAAGCTTGTAGCCTTCTTTTATTTTGCAAACAGTGCCTAAGGAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR-3UTR TCA 90 bp | AGTATCTTTAGAGGACTAGTTTTCTGGACTGGTTTATGCCAGGTGCTTTTGTTTCTCTCTTGCTGTGCTTaGTTTTTAGCTAAAGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: SIFRGLVFWTGLCQVLLFLSCCA*FLAKGR Trigger: CCTCCCTTTAGCTAAAAATCAAGCACAGCAAGAGAG...AAACAAAAGCACCTGGCATAAACCAGTCCAGAAAACTAGTCCTCTAAAGATACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR-3UTR CCA 90 bp | ATTTGTAATCAAACTGCAAGCTGCAGTCAATGGAACACTGGCAATTTTAACCCTGCCCTCATAAAAGTGTaGGGAAGCAGAAAAGCACAT | + |
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Preference number: 2 (lower is better) Translates to: ICNQTASCSQWNTGNFNPALIKV*GSRKAH Trigger: ATGTGCTTTTCTGCTTCCCCACACTTTTATGAGGGC...AGGGTTAAAATTGCCAGTGTTCCATTGACTGCAGCTTGCAGTTTGATTACAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR-3UTR TCA 90 bp | AGTATCTTTAGAGGACTAGTTTTCTGGACTGGTTTATGCCAGGTGCTTTTGTTTAGAAATTCTTTCTTTTaGCAGCTACACCGGGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: SIFRGLVFWTGLCQVLLFRNSFF*QLHREA Trigger: TGCTTCCCGGTGTAGCTGTCAAAAGAAAGAATTTCT...AAACAAAAGCACCTGGCATAAACCAGTCCAGAAAACTAGTCCTCTAAAGATACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR-3UTR CCA 90 bp | ATTTGTAATCAAACTGCAAGCTGCAGTCAATGGAACACTGGCAATTTTAACCCTGAAACAAAGTCAGCATaGGCCGTGAATCGGTTATTT | + |
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Preference number: 2 (lower is better) Translates to: ICNQTASCSQWNTGNFNPETKSA*AVNRLF Trigger: AAATAACCGATTCACGGCCCATGCTGACTTTGTTTC...AGGGTTAAAATTGCCAGTGTTCCATTGACTGCAGCTTGCAGTTTGATTACAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR-3UTR GCA 90 bp | AGTATCTTTAGAGGACTAGTTTTCTGGACTGGTTTATGCCAGGTGCTTTTGTTTTATCTCTTCACTAAATaGCCCATGGTTAATGGGACA | + |
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Preference number: 2 (lower is better) Translates to: SIFRGLVFWTGLCQVLLFYLFTK*PMVNGT Trigger: TGTCCCATTAACCATGGGGCATTTAGTGAAGAGATA...AAACAAAAGCACCTGGCATAAACCAGTCCAGAAAACTAGTCCTCTAAAGATACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR-3UTR CCA 90 bp | AGTATCTTTAGAGGACTAGTTTTCTGGACTGGTTTATGCCAGGTGCTTTTGTTTTTATATCTAAACTCTTaGTTTTACCTCTCAGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: SIFRGLVFWTGLCQVLLFLYLNS*FYLSGQ Trigger: CTGCCCTGAGAGGTAAAACCAAGAGTTTAGATATAA...AAACAAAAGCACCTGGCATAAACCAGTCCAGAAAACTAGTCCTCTAAAGATACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR GCA 72 bp | CTATGCTGCAGGGACAGTGCGCCAAGCTCTCAGGGCTaGTTGTGCTGTCTGGGTGAGGACAACAGGGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: LCCRDSAPSSQG*LCCLGEDNRGE Trigger: CTCTCCCCTGTTGTCCTCACCCAGACAGCACAAGCAGCCCTGAGAGCTTGGCGCACTGTCCCTGCAGCATAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR CCA 72 bp | ACAGTGCGCCAAGCTCTCAGGGCTGCTTGTGCTGTCTaGGTGAGGACAACAGGGGAGAGCCCTAATTGTTTT | + |
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Preference number: 3 (lower is better) Translates to: TVRQALRAACAV*VRTTGESPNCF Trigger: AAAACAATTAGGGCTCTCCCCTGTTGTCCTCACCCAGACAGCACAAGCAGCCCTGAGAGCTTGGCGCACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR TCA 72 bp | AATCAGGGGTGCCCCAGGCGGCATCTGCACCCAATGTaGGGACACAGATGTCTACTTCTAACTTGGGCCAAT | + |
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Preference number: 3 (lower is better) Translates to: NQGCPRRHLHPM*GHRCLLLTWAN Trigger: ATTGGCCCAAGTTAGAAGTAGACATCTGTGTCCTCACATTGGGTGCAGATGCCGCCTGGGGCACCCCTGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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| 3UTR GCA 72 bp | TATTGCAAATCTCTAGCAAGGGCCTCAGCGGAAGCATaGCTGGGCCCAACACACAACTTCTTACCCCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: YCKSLARASAEA*LGPTHNFLPQR Trigger: TCTCTGGGGTAAGAAGTTGTGTGTTGGGCCCAGGCATGCTTCCGCTGAGGCCCTTGCTAGAGATTTGCAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| 3UTR CCA 72 bp | GTGAGGACACAGATGTCTACTTCTAACTTGGGCCAATaGGGCTCGGCACCAATCTTGGAGCTGGAGTTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: VRTQMSTSNLGQ*GSAPILELELE Trigger: CTCTAACTCCAGCTCCAAGATTGGTGCCGAGCCCCATTGGCCCAAGTTAGAAGTAGACATCTGTGTCCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| 3UTR GCA 72 bp | CATCTGCCGCGGTATCTAGGAGCCCTTGAAACTGTTTaGCTTCTAGAAACAAAGTCAGCATGGGCCGTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: HLPRYLGALETV*LLETKSAWAVN Trigger: ATTCACGGCCCATGCTGACTTTGTTTCTAGAAGGCAAACAGTTTCAAGGGCTCCTAGATACCGCGGCAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| 3UTR CCA 72 bp | CGATTTCTCCTCTTTTGTGTACTCAGCACAGCTTTTTaGTCACCACTGTCAGGGCACTCACAGGTCATAGGT | + |
|
Preference number: 3 (lower is better) Translates to: RFLLFCVLSTAF*SPLSGHSQVIG Trigger: ACCTATGACCTGTGAGTGCCCTGACAGTGGTGACCAAAAAGCTGTGCTGAGTACACAAAAGAGGAGAAATCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTTGTAATCAAACTGCAAGCTGCAGTCAATGGAACACTGGCAATTTTAACCCTCCGGGAAGCAGGAACTaGGTGGTGTCAGGGTGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: ICNQTASCSQWNTGNFNPPGSRN*VVSGCG Trigger: ACCACACCCTGACACCACCAAGTTCCTGCTTCCCGG...AGGGTTAAAATTGCCAGTGTTCCATTGACTGCAGCTTGCAGTTTGATTACAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTCTTTCTTTTGACAGCTACACGGGGAAGCAGGAACTTGGTGGTGTCAGGGTGTCAGTAGGACCTCTCTaGCTGTGCTTGATTTTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: ILSFDSYTGKQELGGVRVSVGPL*LCLIFS Trigger: GCTAAAAATCAAGCACAGCAAGAGAGGTCCTACTGA...CACCCTGACACCACCAAGTTCCTGCTTCCCCGTGTAGCTGTCAAAAGAAAGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTCTTTCTTTTGACAGCTACACGGGGAAGCAGGAACTTGGTGGTGTCAGGGTGTCTGTACCAGTCTTTTaGCCTCACGAGTCAGTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: ILSFDSYTGKQELGGVRVSVPVF*PHESVF Trigger: AAAAACTGACTCGTGAGGCAAAAAGACTGGTACAGA...CACCCTGACACCACCAAGTTCCTGCTTCCCCGTGTAGCTGTCAAAAGAAAGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| 3UTR CCA 72 bp | TGGCACCAGGTTGGTACTCCTTGCTGCAGCCCATGGTaGAGATATGAAGTTTCTTTATCTGTTTGTAAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: WHQVGTPCCSPW*RYEVSLSVCKW Trigger: CCACTTACAAACAGATAAAGAAACTTCATATCTCCACCATGGGCTGCAGCAAGGAGTACCAACCTGGTGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTCTTTCTTTTGACAGCTACACGGGGAAGCAGGAACTTGGTGGTGTCAGGGTGTTATGCCAGGTGCTTTaGTTTGAAAATGACTCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: ILSFDSYTGKQELGGVRVLCQVL*FENDSS Trigger: GCTAGAGTCATTTTCAAACAAAAGCACCTGGCATAA...CACCCTGACACCACCAAGTTCCTGCTTCCCCGTGTAGCTGTCAAAAGAAAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| 3UTR TCA 72 bp | TGTCATAGTTATCTTGATACAATCTTAGGCCCCAGGTaGGAGGGCGAGAACTTTCTCAAGCCTCTAAGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: CHSYLDTILGPR*EGENFLKPLSS Trigger: GGAACTTAGAGGCTTGAGAAAGTTCTCGCCCTCTCACCTGGGGCCTAAGATTGTATCAAGATAACTATGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| 3UTR TCA 72 bp | TACTTAAGCATTTTATGGAAATTGAGTCTCTCTCCCTaGGAAGAGGGTGATGAAGCGGTATCCACGTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: YLSILWKLSLSP*EEGDEAVSTSA Trigger: GGCAGACGTGGATACCGCTTCATCACCCTCTTCTCAGGGAGAGAGACTCAATTTCCATAAAATGCTTAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| 3UTR GCA 72 bp | GGGAGAGCCCTAATTGTTTTATGTCTGCAGCGAAATTaGCTTAACCACAGATTTTGTCAGCAGTCTAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GRALIVLCLQRN*LNHRFCQQSRR Trigger: CCTCCTAGACTGCTGACAAAATCTGTGGTTAAGGCAATTTCGCTGCAGACATAAAACAATTAGGGCTCTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| 3UTR TCA 72 bp | ATTACTTTTGCATCTGCCGCGGTATCTAGGAGCCCTTaGAACTGTTTGCCTTCTAGAAACAAAGTCAGCATG | + |
|
Preference number: 3 (lower is better) Translates to: ITFASAAVSRSP*NCLPSRNKVSM Trigger: CATGCTGACTTTGTTTCTAGAAGGCAAACAGTTTCAAGGGCTCCTAGATACCGCGGCAGATGCAAAAGTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| 3UTR TCA 72 bp | ACCTGCTTGTTATCGCCAACGTCCAGCCGATGGCAATaGACTGAAACAAATGCACTTGAAAGAGATGAATCA | + |
|
Preference number: 3 (lower is better) Translates to: TCLLSPTSSRWQ*TETNALERDES Trigger: TGATTCATCTCTTTCAAGTGCATTTGTTTCAGTTCATTGCCATCGGCTGGACGTTGGCGATAACAAGCAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| 3UTR CCA 72 bp | CTTGAAACTGTTTGCCTTCTAGAAACAAAGTCAGCATaGGCCGTGAATCGGTTATTTTCTGTGCCCAGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: LETVCLLETKSA*AVNRLFSVPSR Trigger: TCTACTGGGCACAGAAAATAACCGATTCACGGCCCATGCTGACTTTGTTTCTAGAAGGCAAACAGTTTCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGTCCCAAAATTTTCTCAGCTGCTTCCTGCAATCTGGCAACGAACTGCGCATAAGCCATGGACATCTCTaGTCCACAAAACAAAAATAT | + |
|
Preference number: 3 (lower is better) Translates to: RSQNFLSCFLQSGNELRISHGHL*STKQKY Trigger: ATATTTTTGTTTTGTGGACAAGAGATGTCCATGGCT...TATGCGCAGTTCGTTGCCAGATTGCAGGAAGCAGCTGAGAAAATTTTGGGACCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| 3UTR TCA 72 bp | CCACGAAGGACACAAGGACAAGTCATCTATGAGGCTTaGATTAATGGTCCCAGTCTTTTGGATATAACTTGG | + |
|
Preference number: 3 (lower is better) Translates to: PRRTQGQVIYEA*INGPSLLDITW Trigger: CCAAGTTATATCCAAAAGACTGGGACCATTAATTCAAGCCTCATAGATGACTTGTCCTTGTGTCCTTCGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| 3UTR GCA 72 bp | TGTATTTTAAGTTGGCACCAGGTTGGTACTCCTTGCTaGAGCCCATGGTGGAGATATGAAGTTTCTTTATCT | + |
|
Preference number: 3 (lower is better) Translates to: CILSWHQVGTPC*SPWWRYEVSLS Trigger: AGATAAAGAAACTTCATATCTCCACCATGGGCTGCAGCAAGGAGTACCAACCTGGTGCCAACTTAAAATACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTATCTTTAGAGGACTAGTTTTCTGGACTGGTTTATGCCAGGTGCTTTTGTTTCTCTCTCAGCCTCTGTaGTGCAAACAGAGTGATTCA | + |
|
Preference number: 3 (lower is better) Translates to: SIFRGLVFWTGLCQVLLFLSQPL*CKQSDS Trigger: TGAATCACTCTGTTTGCACAACAGAGGCTGAGAGAG...AAACAAAAGCACCTGGCATAAACCAGTCCAGAAAACTAGTCCTCTAAAGATACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| 3UTR GCA 72 bp | TCTCTCCTTAAGAGAACCCTTTATCTCTTCACTAAATaGCCCATGGTTAATGGGACAACAACTGAATGCCTA | + |
|
Preference number: 3 (lower is better) Translates to: SLLKRTLYLFTK*PMVNGTTTECL Trigger: TAGGCATTCAGTTGTTGTCCCATTAACCATGGGGCATTTAGTGAAGAGATAAAGGGTTCTCTTAAGGAGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCCAATGTATTGAGAAAGGTCCAAGGTTTAAATGCACAAGCAAAGGGGGAAGTGTTACCATAGCCATGTaGTTCATTTCTTACTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: PQCIEKGPRFKCTSKGGSVTIAM*FISYSS Trigger: AGAAGAGTAAGAAATGAACAACATGGCTATGGTAAC...ACTTCCCCCTTTGCTTGTGCATTTAAACCTTGGACCTTTCTCAATACATTGGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| 3UTR-3UTR CAA 90 bp | AACTTCCTTAGGCACTGTTTGCAAAATAAAAGAAGGCTACAAGCTTCTCTGGGCTTAAGGAAATTACTTTaGCATCTGCCGCGGTATCTA | + |
|
Preference number: 3 (lower is better) Translates to: NFLRHCLQNKRRLQASLGLRKLL*HLPRYL Trigger: TAGATACCGCGGCAGATGCAAAAGTAATTTCCTTAA...GCCCAGAGAAGCTTGTAGCCTTCTTTTATTTTGCAAACAGTGCCTAAGGAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCCAATGTATTGAGAAAGGTCCAAGGTTTAAATGCACAAGCAAAGGGGGAAGTTTCCTTAGGCACTGTTaGCAAAATAAAAGAAGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: PQCIEKGPRFKCTSKGGSFLRHC*QNKRRL Trigger: TAGCCTTCTTTTATTTTGCAAACAGTGCCTAAGGAA...ACTTCCCCCTTTGCTTGTGCATTTAAACCTTGGACCTTTCTCAATACATTGGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| 3UTR GCA 72 bp | GGAGATATGAAGTTTCTTTATCTGTTTGTAAGTGGATaGTCTCCGATTTCTCCTCTTTTGTGTACTCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: GDMKFLYLFVSG*SPISPLLCTQH Trigger: GTGCTGAGTACACAAAAGAGGAGAAATCGGAGAGCATCCACTTACAAACAGATAAAGAAACTTCATATCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| 3UTR CCA 72 bp | AAGTATCTGAACAGGATCATGGCAAGTGCCAATAAGTaGATCCTTTTTATCTGCCCTAGACACTATTATATC | + |
|
Preference number: 3 (lower is better) Translates to: KYLNRIMASANK*ILFICPRHYYI Trigger: GATATAATAGTGTCTAGGGCAGATAAAAAGGATCCACTTATTGGCACTTGCCATGATCCTGTTCAGATACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTATCTTTAGAGGACTAGTTTTCTGGACTGGTTTATGCCAGGTGCTTTTGTTTAGACTTAGAAACTTGTaGAGAAAACACATCTACCTC | + |
|
Preference number: 3 (lower is better) Translates to: SIFRGLVFWTGLCQVLLFRLRNL*RKHIYL Trigger: GAGGTAGATGTGTTTTCTCAACAAGTTTCTAAGTCT...AAACAAAAGCACCTGGCATAAACCAGTCCAGAAAACTAGTCCTCTAAAGATACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| 3UTR TCA 72 bp | TGCTTATCATTAGTAAAATGGGCAGTATGTAGCTGCTaGTCTAAAGCTGTGGTAGATACCTTTTTAAAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: CLSLVKWAVCSC*SKAVVDTFLKF Trigger: AAACTTTAAAAAGGTATCTACCACAGCTTTAGATCAGCAGCTACATACTGCCCATTTTACTAATGATAAGCA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| 3UTR CAA 72 bp | TGCTGCAGGGACAGTGCGCCAAGCTCTCAGGGCTGCTaGTGCTGTCTGGGTGAGGACAACAGGGGAGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CCRDSAPSSQGC*CCLGEDNRGEP Trigger: GGGCTCTCCCCTGTTGTCCTCACCCAGACAGCACAAGCAGCCCTGAGAGCTTGGCGCACTGTCCCTGCAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| 3UTR CAA 72 bp | ACTTCTAACTTGGGCCAATGGGGCTCGGCACCAATCTaGGAGCTGGAGTTAGAGCAGCCCCAATGGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TSNLGQWGSAPI*ELELEQPQWPG Trigger: ACCTGGCCATTGGGGCTGCTCTAACTCCAGCTCCAAGATTGGTGCCGAGCCCCATTGGCCCAAGTTAGAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| 3UTR CAA 72 bp | GCACCCAATGTGAGGACACAGATGTCTACTTCTAACTaGGGCCAATGGGGCTCGGCACCAATCTTGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: APNVRTQMSTSN*GQWGSAPILEL Trigger: CAGCTCCAAGATTGGTGCCGAGCCCCATTGGCCCAAGTTAGAAGTAGACATCTGTGTCCTCACATTGGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| 3UTR CAA 72 bp | CCGATTTCTCCTCTTTTGTGTACTCAGCACAGCTTTTaGGTCACCACTGTCAGGGCACTCACAGGTCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: PISPLLCTQHSF*VTTVRALTGHR Trigger: CCTATGACCTGTGAGTGCCCTGACAGTGGTGACCAAAAAGCTGTGCTGAGTACACAAAAGAGGAGAAATCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| CDS-3UTR CCA 90 bp | ATTCTTTCTTTTGACAGCTACACGGGGAAGCAGGAACTTGGTGGTGTCAGGGTGACACACGTTTTGTCATaGTGGTGGCATAATGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILSFDSYTGKQELGGVRVTHVLS*WWHNVG Trigger: CCCTACATTATGCCACCACCATGACAAAACGTGTGT...CACCCTGACACCACCAAGTTCCTGCTTCCCCGTGTAGCTGTCAAAAGAAAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| CDS-3UTR TCA 90 bp | CATCTGCCGCGGTATCTAGGAGCCCTTGAAACTGTTTGCCTTCTAGAAACAAAGAGATATAACAGCCAATaGCTAAAGATGCACACACAC | + |
|
Preference number: 4 (lower is better) Translates to: HLPRYLGALETVCLLETKRYNSQ*LKMHTH Trigger: GTGTGTGTGCATCTTTAGTCATTGGCTGTTATATCT...CTTTGTTTCTAGAAGGCAAACAGTTTCAAGGGCTCCTAGATACCGCGGCAGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| CDS-3UTR CCA 90 bp | TTTTATGTCTGCAGCGAAATTGCCTTAACCACAGATTTTGTCAGCAGTCTAGGAATGTACATGGGCGTGTaGAGCCGAGAGTCTAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FYVCSEIALTTDFVSSLGMYMGV*SRESKR Trigger: TCTCTTAGACTCTCGGCTCCACACGCCCATGTACAT...TCCTAGACTGCTGACAAAATCTGTGGTTAAGGCAATTTCGCTGCAGACATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| 3UTR CAA 72 bp | TTGGTTTTACCTCTCAGGGCAGCCCTACATGCTGAATaGGCATTTTCAAGAGCAAGTTGTCGAACTAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LVLPLRAALHAE*AFSRASCRTNR Trigger: TCTGTTAGTTCGACAACTTGCTCTTGAAAATGCCAATTCAGCATGTAGGGCTGCCCTGAGAGGTAAAACCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| CDS-3UTR TCA 90 bp | CCCCAATGTATTGAGAAAGGTCCAAGGTTTAAATGCACAAGCAAAGGGGGAAGTTCGTCCCATAGAAAATaGAGACAGCTGTTAAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PQCIEKGPRFKCTSKGGSSSHRK*RQLLSV Trigger: CACACTTAACAGCTGTCTTCATTTTCTATGGGACGA...ACTTCCCCCTTTGCTTGTGCATTTAAACCTTGGACCTTTCTCAATACATTGGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| CDS-3UTR GCA 90 bp | TGGGCCCAACACACAACTTCTTACCCCAGAGAGTTCTGTCAAGGTAAGCTGAACAGAGGTAGTCATGATTaGCAAAACATCACAGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: WAQHTTSYPREFCQGKLNRGSHD*QNITEK Trigger: TTTTTCTGTGATGTTTTGGCAATCATGACTACCTCT...GTTCAGCTTACCTTGACAGAACTCTCTGGGGTAAGAAGTTGTGTGTTGGGCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| CDS-3UTR GCA 90 bp | AGTATCTTTAGAGGACTAGTTTTCTGGACTGGTTTATGCCAGGTGCTTTTGTTTATGAAGAGGGGAAGCTaGAGTTGTGAGTCATTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SIFRGLVFWTGLCQVLLFMKRGS*SCESLV Trigger: CACCAATGACTCACAACTGCAGCTTCCCCTCTTCAT...AAACAAAAGCACCTGGCATAAACCAGTCCAGAAAACTAGTCCTCTAAAGATACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| 3UTR CAA 72 bp | CTGACATCTTGGCCCTCCTGTAATAAGGACCGGTTTTaGAGGAACAATTTACCTGTCTATGCCTCTAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: LTSWPSCNKDRF*RNNLPVYASNF Trigger: AAAATTAGAGGCATAGACAGGTAAATTGTTCCTCAAAAACCGGTCCTTATTACAGGAGGGCCAAGATGTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| CDS-3UTR TCA 90 bp | TTTTATGTCTGCAGCGAAATTGCCTTAACCACAGATTTTGTCAGCAGTCTAGGACTTTGGAGTGATTGTTaGAGAGTAACAGAAGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FYVCSEIALTTDFVSSLGLWSDC*RVTEVH Trigger: GTGGACTTCTGTTACTCTTCAACAATCACTCCAAAG...TCCTAGACTGCTGACAAAATCTGTGGTTAAGGCAATTTCGCTGCAGACATAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| 3UTR CAA 72 bp | TTACAAAGCTTGATCATACCATTTATATCTAAACTCTaGGTTTTACCTCTCAGGGCAGCCCTACATGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LQSLIIPFISKL*VLPLRAALHAE Trigger: TTCAGCATGTAGGGCTGCCCTGAGAGGTAAAACCAAGAGTTTAGATATAAATGGTATGATCAAGCTTTGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
||
| CDS-3UTR GCA 90 bp | ATTTGTAATCAAACTGCAAGCTGCAGTCAATGGAACACTGGCAATTTTAACCCTTATCCTGAAGCTGAATaGATCTTTAGTATGTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: ICNQTASCSQWNTGNFNPYPEAE*IFSMLV Trigger: TACCAACATACTAAAGATGCATTCAGCTTCAGGATA...AGGGTTAAAATTGCCAGTGTTCCATTGACTGCAGCTTGCAGTTTGATTACAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213493.2 |
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