RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR1458 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000062844

Ensembl transcript IDs: ENSMUST00000076729.4, ENSMUST00000215160.2

Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGATAGCTCTTTTGTCCATGACATTTAACTCTAACCATGTGAGTTaGAGCAAGTTGGAGCAAAGTTGGAGCATGATAAGGGTTGACTTT +
Preference number: 1 (lower is better)
Translates to: EIALLSMTFNSNHVS*SKLEQSWSMIRVDF
Trigger: AAAGTCAACCCTTATCATGCTCCAACTTTGCTCCAACTTGCTCCAACTCACATGGTTAGAGTTAAATGTCATGGACAAAAGAGCTATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215160.2
3UTR-3UTR CCA 90 bp CATTTAAAGGAGATAGCTCTTTTGTCCATGACATTTAACTCTAACCATGTGAGTAAGTTGGAGCAAAGTTaGAGCATGATAAGGGTTGAC +
Preference number: 2 (lower is better)
Translates to: HLKEIALLSMTFNSNHVSKLEQS*SMIRVD
Trigger: GTCAACCCTTATCATGCTCCAACTTTGCTCCAACTT...ACTCACATGGTTAGAGTTAAATGTCATGGACAAAAGAGCTATCTCCTTTAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215160.2
3UTR-3UTR TCA 90 bp CTCAAATATCTGATAATGAGGAGGGAAAAGTGTTATTACTGTATGTCTTGGACATACCTTTTTGAAAGCTaGCACATTATTCCAGAGGAG +
Preference number: 2 (lower is better)
Translates to: LKYLIMRREKCYYCMSWTYLFES*HIIPEE
Trigger: CTCCTCTGGAATAATGTGTCAGCTTTCAAAAAGGTA...TGTCCAAGACATACAGTAATAACACTTTTCCCTCCTCATTATCAGATATTTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215160.2
3UTR-3UTR TCA 90 bp CTCAAATATCTGATAATGAGGAGGGAAAAGTGTTATTACTGTATGTCTTGGACAATCCTGATACCCCTATaGAATGAGCAAAATTACCTG +
Preference number: 2 (lower is better)
Translates to: LKYLIMRREKCYYCMSWTILIPL*NEQNYL
Trigger: CAGGTAATTTTGCTCATTTCATAGGGGTATCAGGAT...TGTCCAAGACATACAGTAATAACACTTTTCCCTCCTCATTATCAGATATTTGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000215160.2
3UTR CAA 90 bp GGTGATAAATCTTACCTAATAACTCATTTAAAGGAGATAGCTCTTTaGTCCATGACATTTAACTCTAACCATGTGAGTTGGAGCAAGTTG +
Preference number: 2 (lower is better)
Translates to: GDKSYLITHLKEIAL*SMTFNSNHVSWSKL
Trigger: CAACTTGCTCCAACTCACATGGTTAGAGTTAAATGTCATGGACAAAAGAGCTATCTCCTTTAAATGAGTTATTAGGTAAGATTTATCACC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215160.2
3UTR CCA 72 bp CTTTTGTCCATGACATTTAACTCTAACCATGTGAGTTaGAGCAAGTTGGAGCAAAGTTGGAGCATGATAAGG +
Preference number: 3 (lower is better)
Translates to: LLSMTFNSNHVS*SKLEQSWSMIR
Trigger: CCTTATCATGCTCCAACTTTGCTCCAACTTGCTCCAACTCACATGGTTAGAGTTAAATGTCATGGACAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215160.2
3UTR TCA 72 bp AATGTTTGCTGTGTTCATCCTGATACCCCTATGAAATaGGCAAAATTACCTGAACATAAAGGTAGACACATA +
Preference number: 3 (lower is better)
Translates to: NVCCVHPDTPMK*AKLPEHKGRHI
Trigger: TATGTGTCTACCTTTATGTTCAGGTAATTTTGCTCATTTCATAGGGGTATCAGGATGAACACAGCAAACATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215160.2
CDS-3UTR GCA 90 bp CTCAAATATCTGATAATGAGGAGGGAAAAGTGTTATTACTGTATGTCTTGGACAATGAAGAGGGGAAGCTaGAGGTCTGGATCATCGGTG +
Preference number: 4 (lower is better)
Translates to: LKYLIMRREKCYYCMSWTMKRGS*RSGSSV
Trigger: CACCGATGATCCAGACCTGCAGCTTCCCCTCTTCAT...TGTCCAAGACATACAGTAATAACACTTTTCCCTCCTCATTATCAGATATTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215160.2
CDS-3UTR TCA 90 bp GTGAGTTGGAGCAAGTTGGAGCAAAGTTGGAGCATGATAAGGGTTGACTTTTTATCATTAGCATGTCTATaGGAACAAGATGCAATCATG +
Preference number: 4 (lower is better)
Translates to: VSWSKLEQSWSMIRVDFLSLACL*EQDAIM
Trigger: CATGATTGCATCTTGTTCTCATAGACATGCTAATGA...TAAAAAGTCAACCCTTATCATGCTCCAACTTTGCTCCAACTTGCTCCAACTCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215160.2
CDS-3UTR CCA 90 bp CTCAAATATCTGATAATGAGGAGGGAAAAGTGTTATTACTGTATGTCTTGGACAACACACGTGTTGTCATaGTGGTGGCATAATGTAGGG +
Preference number: 4 (lower is better)
Translates to: LKYLIMRREKCYYCMSWTTHVLS*WWHNVG
Trigger: CCCTACATTATGCCACCACCATGACAACACGTGTGT...TGTCCAAGACATACAGTAATAACACTTTTCCCTCCTCATTATCAGATATTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215160.2
3UTR CAA 72 bp ATGACATTTAACTCTAACCATGTGAGTTGGAGCAAGTaGGAGCAAAGTTGGAGCATGATAAGGGTTGACTTT +
Preference number: 4 (lower is better)
Translates to: MTFNSNHVSWSK*EQSWSMIRVDF
Trigger: AAAGTCAACCCTTATCATGCTCCAACTTTGCTCCAACTTGCTCCAACTCACATGGTTAGAGTTAAATGTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215160.2
CDS-3UTR TCA 90 bp CATTTAAAGGAGATAGCTCTTTTGTCCATGACATTTAACTCTAACCATGTGAGTTTTTGGAGTGACTGTTaGAGAGTAACAGAAGTCCAC +
Preference number: 4 (lower is better)
Translates to: HLKEIALLSMTFNSNHVSFWSDC*RVTEVH
Trigger: GTGGACTTCTGTTACTCTTCAACAGTCACTCCAAAA...ACTCACATGGTTAGAGTTAAATGTCATGGACAAAAGAGCTATCTCCTTTAAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215160.2
CDS-3UTR TCA 90 bp CATTTAAAGGAGATAGCTCTTTTGTCCATGACATTTAACTCTAACCATGTGAGTAACAAGATGCAATCATaGCTGCTGGAATGTCACAGA +
Preference number: 4 (lower is better)
Translates to: HLKEIALLSMTFNSNHVSNKMQS*LLECHR
Trigger: TCTGTGACATTCCAGCAGTCATGATTGCATCTTGTT...ACTCACATGGTTAGAGTTAAATGTCATGGACAAAAGAGCTATCTCCTTTAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215160.2
CDS-3UTR GCA 90 bp GTTACCTTTTTGAAAGCTGACACATTATTCCAGAGGAGAAGACATCACAATTTCATGTGGAGAGAGCTTTaGGATATCCTGAATTGGAAT +
Preference number: 4 (lower is better)
Translates to: VTFLKADTLFQRRRHHNFMWREL*DILNWN
Trigger: ATTCCAATTCAGGATATCGCAAAGCTCTCTCCACAT...GAAATTGTGATGTCTTCTCCTCTGGAATAATGTGTCAGCTTTCAAAAAGGTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215160.2
3UTR CAA 72 bp TCTTACCTAATAACTCATTTAAAGGAGATAGCTCTTTaGTCCATGACATTTAACTCTAACCATGTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: SYLITHLKEIAL*SMTFNSNHVSW
Trigger: CCAACTCACATGGTTAGAGTTAAATGTCATGGACAAAAGAGCTATCTCCTTTAAATGAGTTATTAGGTAAGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215160.2
CDS-3UTR CCA 90 bp CTCAAATATCTGATAATGAGGAGGGAAAAGTGTTATTACTGTATGTCTTGGACATGCGATATCCTGAATTaGAATGCATCTTTAGTATGT +
Preference number: 4 (lower is better)
Translates to: LKYLIMRREKCYYCMSWTCDILN*NASLVC
Trigger: ACATACTAAAGATGCATTCCAATTCAGGATATCGCA...TGTCCAAGACATACAGTAATAACACTTTTCCCTCCTCATTATCAGATATTTGAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215160.2
CDS CCA 90 bp GATGTAGATGAGAAGAAATGTGATGAAGAGGGGAAGCTGCAGGTCTaGATCATCGGTGAGTCCCATCAGGATGAAGCGTACCATTTCTGT +
Preference number: 5 (lower is better)
Translates to: DVDEKKCDEEGKLQV*IIGESHQDEAYHFC
Trigger: ACAGAAATGGTACGCTTCATCCTGATGGGACTCACCGATGATCCAGACCTGCAGCTTCCCCTCTTCATCACATTTCTTCTCATCTACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215160.2
CDS-3UTR CAA 90 bp GTTACCTTTTTGAAAGCTGACACATTATTCCAGAGGAGAAGACATCACAATTTCAGCGCAAAGAAGATATaGAAGCTGGCTACAGAAATA +
Preference number: 5 (lower is better)
Translates to: VTFLKADTLFQRRRHHNFSAKKI*KLATEI
Trigger: TATTTCTGTAGCCAGCTTCAATATCTTCTTTGCGCT...GAAATTGTGATGTCTTCTCCTCTGGAATAATGTGTCAGCTTTCAAAAAGGTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215160.2
CDS-3UTR CAA 90 bp GTTACCTTTTTGAAAGCTGACACATTATTCCAGAGGAGAAGACATCACAATTTCTTGCGATATCCTGAATaGGAATGCATCTTTAGTATG +
Preference number: 5 (lower is better)
Translates to: VTFLKADTLFQRRRHHNFLRYPE*ECIFSM
Trigger: CATACTAAAGATGCATTCCAATTCAGGATATCGCAA...GAAATTGTGATGTCTTCTCCTCTGGAATAATGTGTCAGCTTTCAAAAAGGTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215160.2
CDS CCA 72 bp GAGAAGAAATGTGATGAAGAGGGGAAGCTGCAGGTCTaGATCATCGGTGAGTCCCATCAGGATGAAGCGTAC +
Preference number: 6 (lower is better)
Translates to: EKKCDEEGKLQV*IIGESHQDEAY
Trigger: GTACGCTTCATCCTGATGGGACTCACCGATGATCCAGACCTGCAGCTTCCCCTCTTCATCACATTTCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076729.4
ENSMUST00000215160.2