Pregenerated sensors for OLFR1448 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048456Ensembl transcript IDs: ENSMUST00000054737.3, ENSMUST00000213177.2, ENSMUST00000213713.2, ENSMUST00000216888.2
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTACTCAACTAGAAGTAGAATATTATGATCACCTCCTTCATTCATaGTTGGCTTTTGGCTTCCTTGATCTTGTGTATGAAGTCATGCTG | + |
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Preference number: 1 (lower is better) Translates to: ATQLEVEYYDHLLHS*LAFGFLDLVYEVML Trigger: CAGCATGACTTCATACACAAGATCAAGGAAGCCAAAAGCCAAGCATGAATGAAGGAGGTGATCATAATATTCTACTTCTAGTTGAGTAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR TCA 90 bp | GATACTAACCACTGTCATTTTGTAGCAGGTAAGGATTTCCCCATGTaGTTGTCATTAAAGAGAGATGCATGTGCAATTCACATACACACA | + |
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Preference number: 1 (lower is better) Translates to: DTNHCHFVAGKDFPM*LSLKRDACAIHIHT Trigger: TGTGTGTATGTGAATTGCACATGCATCTCTCTTTAATGACAATCACATGGGGAAATCCTTACCTGCTACAAAATGACAGTGGTTAGTATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR CCA 90 bp | TGTAGAATACAGAGTCCTTTAGGAATATGTCAGGACAGGTATAGCTaGTTATGTGGTAGATCTATTTCACACATTTGCAGGAACTGTTAC | + |
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Preference number: 1 (lower is better) Translates to: CRIQSPLGICQDRYS*LCGRSISHICRNCY Trigger: GTAACAGTTCCTGCAAATGTGTGAAATAGATCTACCACATAACCAGCTATACCTGTCCTGACATATTCCTAAAGGACTCTGTATTCTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR GCA 90 bp | AATCGTATCATTTCCAGTCAATACTACTTTAGTATAGACTTCCACTaGATCTTTCTAACACCTTTCTATGATGAACCTTGGTCTTTGGAG | + |
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Preference number: 1 (lower is better) Translates to: NRIISSQYYFSIDFH*IFLTPFYDEPWSLE Trigger: CTCCAAAGACCAAGGTTCATCATAGAAAGGTGTTAGAAAGATGCAGTGGAAGTCTATACTAAAGTAGTATTGACTGGAAATGATACGATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR-3UTR GCA 90 bp | ATTTCACACATTTGCAGGAACTGTTACACTGGTTTCCATAGTGACCACACCAGTGGCGTGCCCCACCACTaGCTGGCTGTGATGTTTATT | + |
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Preference number: 2 (lower is better) Translates to: ISHICRNCYTGFHSDHTSGVPHH*LAVMFI Trigger: AATAAACATCACAGCCAGGCAGTGGTGGGGCACGCC...ACTGGTGTGGTCACTATGGAAACCAGTGTAACAGTTCCTGCAAATGTGTGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR-3UTR GCA 90 bp | CATAGCGTTAGTTATTTCTCCCCATATTTGTTGATTCTTTTCTCTGCTATCCCACTGGGATTAAAGGCGTaGCCCACCACTGCCTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: HSVSYFSPYLLILFSAIPLGLKA*PTTAWL Trigger: CAGCCAGGCAGTGGTGGGGCACGCCTTTAATCCCAG...TGGGATAGCAGAGAAAAGAATCAACAAATATGGGGAGAAATAACTAACGCTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGACAAGGCTGGCCTTGAACTCAGATATCCACCTGCTTCTGCCTCTCAAGTGAAGGATTTCCCCATGTaGTTGTCATTAAAGAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: VDKAGLELRYPPASASQVKDFPM*LSLKRD Trigger: ATCTCTCTTTAATGACAATCACATGGGGAAATCCTT...CACTTGAGAGGCAGAAGCAGGTGGATATCTGAGTTCAAGGCCAGCCTTGTCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR-3UTR GCA 90 bp | AACCTTGGTCTTTGGAGAGATGACTATTATAATAGCTGTTCTGCAGTCTTATTTCTGGGATTAAAGGCGTaGCCCACCACTGCCTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: NLGLWRDDYYNSCSAVLFLGLKA*PTTAWL Trigger: CAGCCAGGCAGTGGTGGGGCACGCCTTTAATCCCAG...AAATAAGACTGCAGAACAGCTATTATAATAGTCATCTCTCCAAAGACCAAGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR-3UTR TCA 90 bp | GGCCTTGAACTCAGATATCCACCTGCTTCTGCCTCTCAAGTGCTGGGATTAAAGAAGGATTTCCCCATGTaGTTGTCATTAAAGAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: GLELRYPPASASQVLGLKKDFPM*LSLKRD Trigger: ATCTCTCTTTAATGACAATCACATGGGGAAATCCTT...CTTTAATCCCAGCACTTGAGAGGCAGAAGCAGGTGGATATCTGAGTTCAAGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR-3UTR GCA 90 bp | CATAGCGTTAGTTATTTCTCCCCATATTTGTTGATTCTTTTCTCTGCTATCCCAGGCGTGCCCCACCACTaGCTGGCTGTGATGTTTATT | + |
|
Preference number: 2 (lower is better) Translates to: HSVSYFSPYLLILFSAIPGVPHH*LAVMFI Trigger: AATAAACATCACAGCCAGGCAGTGGTGGGGCACGCC...TGGGATAGCAGAGAAAAGAATCAACAAATATGGGGAGAAATAACTAACGCTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR-3UTR GCA 90 bp | GGCCAGCATGCGTGCGAGCTTACAATTGTCTACTTGAACATGGGCAGTCTTTCATCTATTTCACACATTTaGAGGAACTGTTACACTGGT | + |
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Preference number: 2 (lower is better) Translates to: GQHACELTIVYLNMGSLSSISHI*RNCYTG Trigger: ACCAGTGTAACAGTTCCTGCAAATGTGTGAAATAGA...TGAAAGACTGCCCATGTTCAAGTAGACAATTGTAAGCTCGCACGCATGCTGGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCAGCATGCGTGCGAGCTTACAATTGTCTACTTGAACATGGGCAGTCTTTCAATCCCTTTCCATAAATaGATGGCAGATTTTGTTATC | + |
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Preference number: 2 (lower is better) Translates to: GQHACELTIVYLNMGSLSIPFHK*MADFVI Trigger: GATAACAAAATCTGCCATCCATTTATGGAAAGGGAT...TGAAAGACTGCCCATGTTCAAGTAGACAATTGTAAGCTCGCACGCATGCTGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR-3UTR TCA 90 bp | ATAATGCTTCACCATTATGGGGGTTTGTGTTATAAAACAAGTGCCTGTATAAAGCTCAGTTCTCCTCCCTaGGCAGTCACATTGCCAAAA | + |
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Preference number: 2 (lower is better) Translates to: IMLHHYGGLCYKTSACIKLSSPP*AVTLPK Trigger: TTTTGGCAATGTGACTGCTCAGGGAGGAGAACTGAG...CTTTATACAGGCACTTGTTTTATAACACAAACCCCCATAATGGTGAAGCATTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213713.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCTTTTGGCTTCCTTGATCTTGTGTATGAAGTCATGCTGCTATAAGTTTATACACTTCCACCAGCAGTaGAAAAGTGATCCCTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: WLLASLILCMKSCCYKFIHFHQQ*KSDPFP Trigger: TGGAAAGGGATCACTTTTGCACTGCTGGTGGAAGTG...TATAAACTTATAGCAGCATGACTTCATACACAAGATCAAGGAAGCCAAAAGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR-3UTR TCA 90 bp | TGGCTTTTGGCTTCCTTGATCTTGTGTATGAAGTCATGCTGCTATAAGTTTATACCAGCAGTGCAAAAGTaGTCCCTTTCCATAAATGGA | + |
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Preference number: 2 (lower is better) Translates to: WLLASLILCMKSCCYKFIPAVQK*SLSING Trigger: TCCATTTATGGAAAGGGATCACTTTTGCACTGCTGG...TATAAACTTATAGCAGCATGACTTCATACACAAGATCAAGGAAGCCAAAAGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR-3UTR TCA 90 bp | CACCTTTCTATGATGAACCTTGGTCTTTGGAGAGATGACTATTATAATAGCTGTCCAGCAGTGCAAAAGTaGTCCCTTTCCATAAATGGA | + |
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Preference number: 2 (lower is better) Translates to: HLSMMNLGLWRDDYYNSCPAVQK*SLSING Trigger: TCCATTTATGGAAAGGGATCACTTTTGCACTGCTGG...ACAGCTATTATAATAGTCATCTCTCCAAAGACCAAGGTTCATCATAGAAAGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR-3UTR GCA 90 bp | AACCTTGGTCTTTGGAGAGATGACTATTATAATAGCTGTTCTGCAGTCTTATTTCACTTCCACCAGCAGTaGAAAAGTGATCCCTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: NLGLWRDDYYNSCSAVLFHFHQQ*KSDPFP Trigger: TGGAAAGGGATCACTTTTGCACTGCTGGTGGAAGTG...AAATAAGACTGCAGAACAGCTATTATAATAGTCATCTCTCCAAAGACCAAGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR CAA 90 bp | ACTCAACTAGAAGTAGAATATTATGATCACCTCCTTCATTCATGCTaGGCTTTTGGCTTCCTTGATCTTGTGTATGAAGTCATGCTGCTA | + |
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Preference number: 2 (lower is better) Translates to: TQLEVEYYDHLLHSC*AFGFLDLVYEVMLL Trigger: TAGCAGCATGACTTCATACACAAGATCAAGGAAGCCAAAAGCCAAGCATGAATGAAGGAGGTGATCATAATATTCTACTTCTAGTTGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR-3UTR TCA 90 bp | CATTCCATTGACTCTTCCTTTTCCAATAGTTTCTCCTCTTCAGACTATGTATATCCAGCAGTGCAAAAGTaGTCCCTTTCCATAAATGGA | + |
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Preference number: 2 (lower is better) Translates to: HSIDSSFSNSFSSSDYVYPAVQK*SLSING Trigger: TCCATTTATGGAAAGGGATCACTTTTGCACTGCTGG...ATATACATAGTCTGAAGAGGAGAAACTATTGGAAAAGGAAGAGTCAATGGAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR-3UTR GCA 90 bp | ATTTCACACATTTGCAGGAACTGTTACACTGGTTTCCATAGTGACCACACCAGTGTCATTAAAGAGAGATaGATGTGCAATTCACATACA | + |
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Preference number: 2 (lower is better) Translates to: ISHICRNCYTGFHSDHTSVIKER*MCNSHT Trigger: TGTATGTGAATTGCACATGCATCTCTCTTTAATGAC...ACTGGTGTGGTCACTATGGAAACCAGTGTAACAGTTCCTGCAAATGTGTGAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR-3UTR CCA 90 bp | ATTTCACACATTTGCAGGAACTGTTACACTGGTTTCCATAGTGACCACACCAGTGCCATGGTTTTAAGTTaGGTGACTTATTTTCTTGAT | + |
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Preference number: 2 (lower is better) Translates to: ISHICRNCYTGFHSDHTSAMVLS*VTYFLD Trigger: ATCAAGAAAATAAGTCACCCAACTTAAAACCATGGC...ACTGGTGTGGTCACTATGGAAACCAGTGTAACAGTTCCTGCAAATGTGTGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR-3UTR CCA 90 bp | ATTTCACACATTTGCAGGAACTGTTACACTGGTTTCCATAGTGACCACACCAGTATCCCTTTCCATAAATaGATGGCAGATTTTGTTATC | + |
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Preference number: 2 (lower is better) Translates to: ISHICRNCYTGFHSDHTSIPFHK*MADFVI Trigger: GATAACAAAATCTGCCATCCATTTATGGAAAGGGAT...ACTGGTGTGGTCACTATGGAAACCAGTGTAACAGTTCCTGCAAATGTGTGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR-3UTR GCA 90 bp | AGATCTATTTCACACATTTGCAGGAACTGTTACACTGGTTTCCATAGTGACCACGTCATTAAAGAGAGATaGATGTGCAATTCACATACA | + |
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Preference number: 2 (lower is better) Translates to: RSISHICRNCYTGFHSDHVIKER*MCNSHT Trigger: TGTATGTGAATTGCACATGCATCTCTCTTTAATGAC...GTGGTCACTATGGAAACCAGTGTAACAGTTCCTGCAAATGTGTGAAATAGATCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR-3UTR GCA 90 bp | CACCTTTCTATGATGAACCTTGGTCTTTGGAGAGATGACTATTATAATAGCTGTTTCTGTTCAGTTCCATaGCATGGTTTTAAGTTGGGT | + |
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Preference number: 2 (lower is better) Translates to: HLSMMNLGLWRDDYYNSCFCSVP*HGFKLG Trigger: ACCCAACTTAAAACCATGGCATGGAACTGAACAGAA...ACAGCTATTATAATAGTCATCTCTCCAAAGACCAAGGTTCATCATAGAAAGGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR-3UTR GCA 90 bp | CATAGCGTTAGTTATTTCTCCCCATATTTGTTGATTCTTTTCTCTGCTATCCCATTCTGTTCAGTTCCATaGCATGGTTTTAAGTTGGGT | + |
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Preference number: 2 (lower is better) Translates to: HSVSYFSPYLLILFSAIPFCSVP*HGFKLG Trigger: ACCCAACTTAAAACCATGGCATGGAACTGAACAGAA...TGGGATAGCAGAGAAAAGAATCAACAAATATGGGGAGAAATAACTAACGCTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR-3UTR GCA 90 bp | CACCTTTCTATGATGAACCTTGGTCTTTGGAGAGATGACTATTATAATAGCTGTGTTGATTCTTTTCTCTaGTATCCCATCTCTCATTCC | + |
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Preference number: 2 (lower is better) Translates to: HLSMMNLGLWRDDYYNSCVDSFL*YPISHS Trigger: GGAATGAGAGATGGGATAGCAGAGAAAAGAATCAAC...ACAGCTATTATAATAGTCATCTCTCCAAAGACCAAGGTTCATCATAGAAAGGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR-3UTR CCA 90 bp | AGATCTATTTCACACATTTGCAGGAACTGTTACACTGGTTTCCATAGTGACCACTACAACTCTATGGGATaGTTAGCCAATATTATGCAT | + |
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Preference number: 2 (lower is better) Translates to: RSISHICRNCYTGFHSDHYNSMG*LANIMH Trigger: ATGCATAATATTGGCTAACCATCCCATAGAGTTGTA...GTGGTCACTATGGAAACCAGTGTAACAGTTCCTGCAAATGTGTGAAATAGATCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR-3UTR CCA 90 bp | CACCTTTCTATGATGAACCTTGGTCTTTGGAGAGATGACTATTATAATAGCTGTACCTCCCACAACCTATaGCCACTTACTAATTTTCTA | + |
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Preference number: 2 (lower is better) Translates to: HLSMMNLGLWRDDYYNSCTSHNL*PLTNFL Trigger: TAGAAAATTAGTAAGTGGCCATAGGTTGTGGGAGGT...ACAGCTATTATAATAGTCATCTCTCCAAAGACCAAGGTTCATCATAGAAAGGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR-3UTR CCA 90 bp | CATAGCGTTAGTTATTTCTCCCCATATTTGTTGATTCTTTTCTCTGCTATCCCAACCTCCCACAACCTATaGCCACTTACTAATTTTCTA | + |
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Preference number: 2 (lower is better) Translates to: HSVSYFSPYLLILFSAIPTSHNL*PLTNFL Trigger: TAGAAAATTAGTAAGTGGCCATAGGTTGTGGGAGGT...TGGGATAGCAGAGAAAAGAATCAACAAATATGGGGAGAAATAACTAACGCTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR-3UTR TCA 90 bp | CATAGCGTTAGTTATTTCTCCCCATATTTGTTGATTCTTTTCTCTGCTATCCCAAAGGATTTCCCCATGTaGTTGTCATTAAAGAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: HSVSYFSPYLLILFSAIPKDFPM*LSLKRD Trigger: ATCTCTCTTTAATGACAATCACATGGGGAAATCCTT...TGGGATAGCAGAGAAAAGAATCAACAAATATGGGGAGAAATAACTAACGCTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR-3UTR TCA 90 bp | CACCTTTCTATGATGAACCTTGGTCTTTGGAGAGATGACTATTATAATAGCTGTTTCTGTTGCTTCTTTTaGGAATTCTGTTCAGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: HLSMMNLGLWRDDYYNSCFCCFF*EFCSVP Trigger: TGGAACTGAACAGAATTCTCAAAAGAAGCAACAGAA...ACAGCTATTATAATAGTCATCTCTCCAAAGACCAAGGTTCATCATAGAAAGGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR-3UTR TCA 90 bp | CATTCCATTGACTCTTCCTTTTCCAATAGTTTCTCCTCTTCAGACTATGTATATCTGACAGGCGTTAGATaGAAACTCAAAGTACTGTTA | + |
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Preference number: 2 (lower is better) Translates to: HSIDSSFSNSFSSSDYVYLTGVR*KLKVLL Trigger: TAACAGTACTTTGAGTTTTCATCTAACGCCTGTCAG...ATATACATAGTCTGAAGAGGAGAAACTATTGGAAAAGGAAGAGTCAATGGAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR-3UTR TCA 90 bp | AACCTTGGTCTTTGGAGAGATGACTATTATAATAGCTGTTCTGCAGTCTTATTTTTCTGTTGCTTCTTTTaGGAATTCTGTTCAGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: NLGLWRDDYYNSCSAVLFFCCFF*EFCSVP Trigger: TGGAACTGAACAGAATTCTCAAAAGAAGCAACAGAA...AAATAAGACTGCAGAACAGCTATTATAATAGTCATCTCTCCAAAGACCAAGGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR-3UTR GCA 90 bp | CATAGCGTTAGTTATTTCTCCCCATATTTGTTGATTCTTTTCTCTGCTATCCCAGTCATTAAAGAGAGATaGATGTGCAATTCACATACA | + |
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Preference number: 2 (lower is better) Translates to: HSVSYFSPYLLILFSAIPVIKER*MCNSHT Trigger: TGTATGTGAATTGCACATGCATCTCTCTTTAATGAC...TGGGATAGCAGAGAAAAGAATCAACAAATATGGGGAGAAATAACTAACGCTATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR-3UTR CCA 90 bp | CACCTTTCTATGATGAACCTTGGTCTTTGGAGAGATGACTATTATAATAGCTGTTACAACTCTATGGGATaGTTAGCCAATATTATGCAT | + |
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Preference number: 2 (lower is better) Translates to: HLSMMNLGLWRDDYYNSCYNSMG*LANIMH Trigger: ATGCATAATATTGGCTAACCATCCCATAGAGTTGTA...ACAGCTATTATAATAGTCATCTCTCCAAAGACCAAGGTTCATCATAGAAAGGTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR-3UTR CCA 90 bp | CACCTTTCTATGATGAACCTTGGTCTTTGGAGAGATGACTATTATAATAGCTGTGCCATGGTTTTAAGTTaGGTGACTTATTTTCTTGAT | + |
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Preference number: 2 (lower is better) Translates to: HLSMMNLGLWRDDYYNSCAMVLS*VTYFLD Trigger: ATCAAGAAAATAAGTCACCCAACTTAAAACCATGGC...ACAGCTATTATAATAGTCATCTCTCCAAAGACCAAGGTTCATCATAGAAAGGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR-3UTR CCA 90 bp | TGGCTTTTGGCTTCCTTGATCTTGTGTATGAAGTCATGCTGCTATAAGTTTATATTTCTTACAGCTGAATaGTACTCCATTGTATATGTG | + |
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Preference number: 2 (lower is better) Translates to: WLLASLILCMKSCCYKFIFLTAE*YSIVYV Trigger: CACATATACAATGGAGTACCATTCAGCTGTAAGAAA...TATAAACTTATAGCAGCATGACTTCATACACAAGATCAAGGAAGCCAAAAGCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR-3UTR CCA 90 bp | ATAATGCTTCACCATTATGGGGGTTTGTGTTATAAAACAAGTGCCTGTATAAAGTACAACTCTATGGGATaGTTAGCCAATATTATGCAT | + |
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Preference number: 2 (lower is better) Translates to: IMLHHYGGLCYKTSACIKYNSMG*LANIMH Trigger: ATGCATAATATTGGCTAACCATCCCATAGAGTTGTA...CTTTATACAGGCACTTGTTTTATAACACAAACCCCCATAATGGTGAAGCATTAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213713.2 |
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| 3UTR-3UTR CAA 90 bp | GGCCAGCATGCGTGCGAGCTTACAATTGTCTACTTGAACATGGGCAGTCTTTCAATTCATGCTTGGCTTTaGGCTTCCTTGATCTTGTGT | + |
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Preference number: 3 (lower is better) Translates to: GQHACELTIVYLNMGSLSIHAWL*ASLILC Trigger: ACACAAGATCAAGGAAGCCAAAAGCCAAGCATGAAT...TGAAAGACTGCCCATGTTCAAGTAGACAATTGTAAGCTCGCACGCATGCTGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR GCA 72 bp | CTTAAATTAAATGAGCCTACTTCTGGCCAGCATGCGTaGGAGCTTACAATTGTCTACTTGAACATGGGCAGT | + |
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Preference number: 3 (lower is better) Translates to: LKLNEPTSGQHA*ELTIVYLNMGS Trigger: ACTGCCCATGTTCAAGTAGACAATTGTAAGCTCGCACGCATGCTGGCCAGAAGTAGGCTCATTTAATTTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR CCA 72 bp | CAGAGTCCTTTAGGAATATGTCAGGACAGGTATAGCTaGTTATGTGGTAGATCTATTTCACACATTTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: QSPLGICQDRYS*LCGRSISHICR Trigger: CCTGCAAATGTGTGAAATAGATCTACCACATAACCAGCTATACCTGTCCTGACATATTCCTAAAGGACTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| 3UTR TCA 72 bp | CACTGTCATTTTGTAGCAGGTAAGGATTTCCCCATGTaGTTGTCATTAAAGAGAGATGCATGTGCAATTCAC | + |
|
Preference number: 3 (lower is better) Translates to: HCHFVAGKDFPM*LSLKRDACAIH Trigger: GTGAATTGCACATGCATCTCTCTTTAATGACAATCACATGGGGAAATCCTTACCTGCTACAAAATGACAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| 3UTR TCA 72 bp | TCCATTGTATATGTGTTCTACAGTTTCATAATCCATTaGTCAGTTGAGGGGCATCTAAGCTGTCTCCGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SIVYVFYSFIIH*SVEGHLSCLRF Trigger: AAAACGGAGACAGCTTAGATGCCCCTCAACTGATCAATGGATTATGAAACTGTAGAACACATATACAATGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| 3UTR TCA 72 bp | ATTGCCAAAAGCTACTCAACTAGAAGTAGAATATTATaGTCACCTCCTTCATTCATGCTTGGCTTTTGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: IAKSYSTRSRIL*SPPSFMLGFWL Trigger: AAGCCAAAAGCCAAGCATGAATGAAGGAGGTGATCATAATATTCTACTTCTAGTTGAGTAGCTTTTGGCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| 3UTR GCA 72 bp | CTAGAAGTAGAATATTATGATCACCTCCTTCATTCATaGTTGGCTTTTGGCTTCCTTGATCTTGTGTATGAA | + |
|
Preference number: 3 (lower is better) Translates to: LEVEYYDHLLHS*LAFGFLDLVYE Trigger: TTCATACACAAGATCAAGGAAGCCAAAAGCCAAGCATGAATGAAGGAGGTGATCATAATATTCTACTTCTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| 3UTR-3UTR CAA 90 bp | CACCTTTCTATGATGAACCTTGGTCTTTGGAGAGATGACTATTATAATAGCTGTATTCTGTTGCTTCTTTaGAGAATTCTGTTCAGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: HLSMMNLGLWRDDYYNSCILLLL*RILFSS Trigger: GGAACTGAACAGAATTCTCAAAAGAAGCAACAGAAT...ACAGCTATTATAATAGTCATCTCTCCAAAGACCAAGGTTCATCATAGAAAGGTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTTTTGGCTTCCTTGATCTTGTGTATGAAGTCATGCTGCTATAAGTTTATATTCTCCCCATATTTGTaGATTCTTTTCTCTGCTATC | + |
|
Preference number: 3 (lower is better) Translates to: WLLASLILCMKSCCYKFIFSPYL*ILFSAI Trigger: GATAGCAGAGAAAAGAATCAACAAATATGGGGAGAA...TATAAACTTATAGCAGCATGACTTCATACACAAGATCAAGGAAGCCAAAAGCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| 3UTR-3UTR CAA 90 bp | CATTCCATTGACTCTTCCTTTTCCAATAGTTTCTCCTCTTCAGACTATGTATATATTCTGTTGCTTCTTTaGAGAATTCTGTTCAGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: HSIDSSFSNSFSSSDYVYILLLL*RILFSS Trigger: GGAACTGAACAGAATTCTCAAAAGAAGCAACAGAAT...ATATACATAGTCTGAAGAGGAGAAACTATTGGAAAAGGAAGAGTCAATGGAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| 3UTR-3UTR CAA 90 bp | ATAATGCTTCACCATTATGGGGGTTTGTGTTATAAAACAAGTGCCTGTATAAAGATTCTGTTGCTTCTTTaGAGAATTCTGTTCAGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: IMLHHYGGLCYKTSACIKILLLL*RILFSS Trigger: GGAACTGAACAGAATTCTCAAAAGAAGCAACAGAAT...CTTTATACAGGCACTTGTTTTATAACACAAACCCCCATAATGGTGAAGCATTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213713.2 |
||
| 3UTR GCA 72 bp | ATTTCCAGTCAATACTACTTTAGTATAGACTTCCACTaGATCTTTCTAACACCTTTCTATGATGAACCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: ISSQYYFSIDFH*IFLTPFYDEPW Trigger: CCAAGGTTCATCATAGAAAGGTGTTAGAAAGATGCAGTGGAAGTCTATACTAAAGTAGTATTGACTGGAAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| CDS-3UTR TCA 90 bp | GTAGACAAGGCTGGCCTTGAACTCAGATATCCACCTGCTTCTGCCTCTCAAGTGTCAGTGCCCATGGTGTaGCTGGAACTGGGCTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: VDKAGLELRYPPASASQVSVPMV*LELGCK Trigger: CTTACAGCCCAGTTCCAGTCACACCATGGGCACTGA...CACTTGAGAGGCAGAAGCAGGTGGATATCTGAGTTCAAGGCCAGCCTTGTCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| CDS-3UTR TCA 90 bp | GGCCTTGAACTCAGATATCCACCTGCTTCTGCCTCTCAAGTGCTGGGATTAAAGTCAGTGCCCATGGTGTaGCTGGAACTGGGCTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLELRYPPASASQVLGLKSVPMV*LELGCK Trigger: CTTACAGCCCAGTTCCAGTCACACCATGGGCACTGA...CTTTAATCCCAGCACTTGAGAGGCAGAAGCAGGTGGATATCTGAGTTCAAGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| CDS-3UTR TCA 90 bp | GGCCAGCATGCGTGCGAGCTTACAATTGTCTACTTGAACATGGGCAGTCTTTCACCAGAGATAGATGACTaGGGAAAAGGTACATGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GQHACELTIVYLNMGSLSPEIDD*GKGTWE Trigger: CTCCCATGTACCTTTTCCTCAGTCATCTATCTCTGG...TGAAAGACTGCCCATGTTCAAGTAGACAATTGTAAGCTCGCACGCATGCTGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| CDS-3UTR CCA 90 bp | GTAGACAAGGCTGGCCTTGAACTCAGATATCCACCTGCTTCTGCCTCTCAAGTGAGACATAGGAACCTATaGTCAGACAAGCACAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: VDKAGLELRYPPASASQVRHRNL*SDKHKY Trigger: ATACTTGTGCTTGTCTGACCATAGGTTCCTATGTCT...CACTTGAGAGGCAGAAGCAGGTGGATATCTGAGTTCAAGGCCAGCCTTGTCTAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| CDS-3UTR GCA 90 bp | GGCCAGCATGCGTGCGAGCTTACAATTGTCTACTTGAACATGGGCAGTCTTTCAAGAAGAAGAATTGGGTaGCACAAGTGTTATGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: GQHACELTIVYLNMGSLSRRRIG*HKCYGI Trigger: TATCCCATAACACTTGTGGCACCCAATTCTTCTTCT...TGAAAGACTGCCCATGTTCAAGTAGACAATTGTAAGCTCGCACGCATGCTGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| CDS-3UTR CCA 90 bp | GTAGACAAGGCTGGCCTTGAACTCAGATATCCACCTGCTTCTGCCTCTCAAGTGGTGCCACAAGTGTTATaGGATATGGTTTTGTCTATT | + |
|
Preference number: 4 (lower is better) Translates to: VDKAGLELRYPPASASQVVPQVL*DMVLSI Trigger: AATAGACAAAACCATATCCCATAACACTTGTGGCAC...CACTTGAGAGGCAGAAGCAGGTGGATATCTGAGTTCAAGGCCAGCCTTGTCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| CDS-3UTR TCA 90 bp | TGGCTTTTGGCTTCCTTGATCTTGTGTATGAAGTCATGCTGCTATAAGTTTATATCAGTGCCCATGGTGTaGCTGGAACTGGGCTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: WLLASLILCMKSCCYKFISVPMV*LELGCK Trigger: CTTACAGCCCAGTTCCAGTCACACCATGGGCACTGA...TATAAACTTATAGCAGCATGACTTCATACACAAGATCAAGGAAGCCAAAAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| CDS-3UTR TCA 90 bp | AGATCTATTTCACACATTTGCAGGAACTGTTACACTGGTTTCCATAGTGACCACCCAGAGATAGATGACTaGGGAAAAGGTACATGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RSISHICRNCYTGFHSDHPEIDD*GKGTWE Trigger: CTCCCATGTACCTTTTCCTCAGTCATCTATCTCTGG...GTGGTCACTATGGAAACCAGTGTAACAGTTCCTGCAAATGTGTGAAATAGATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| CDS-3UTR TCA 90 bp | AGATCTATTTCACACATTTGCAGGAACTGTTACACTGGTTTCCATAGTGACCACTGCAGAAGGAAAGCCTaGAAATGTTCCCAGTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RSISHICRNCYTGFHSDHCRRKA*KCSQCG Trigger: TCCACACTGGGAACATTTTCAGGCTTTCCTTCTGCA...GTGGTCACTATGGAAACCAGTGTAACAGTTCCTGCAAATGTGTGAAATAGATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| CDS-3UTR CCA 90 bp | ATTTCACACATTTGCAGGAACTGTTACACTGGTTTCCATAGTGACCACACCAGTGAAGACAATGAAGAGTaGTATCTGGAGCTTTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ISHICRNCYTGFHSDHTSEDNEE*YLELWV Trigger: GACCCAAAGCTCCAGATACCACTCTTCATTGTCTTC...ACTGGTGTGGTCACTATGGAAACCAGTGTAACAGTTCCTGCAAATGTGTGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| CDS-3UTR TCA 90 bp | AGATCTATTTCACACATTTGCAGGAACTGTTACACTGGTTTCCATAGTGACCACAGTGGTCTATCACATTaGACTTGCAGAAGGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RSISHICRNCYTGFHSDHSGLSH*TCRRKA Trigger: GGCTTTCCTTCTGCAAGTTCAATGTGATAGACCACT...GTGGTCACTATGGAAACCAGTGTAACAGTTCCTGCAAATGTGTGAAATAGATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| CDS-3UTR TCA 90 bp | CATAGCGTTAGTTATTTCTCCCCATATTTGTTGATTCTTTTCTCTGCTATCCCATGCAGAAGGAAAGCCTaGAAATGTTCCCAGTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HSVSYFSPYLLILFSAIPCRRKA*KCSQCG Trigger: TCCACACTGGGAACATTTTCAGGCTTTCCTTCTGCA...TGGGATAGCAGAGAAAAGAATCAACAAATATGGGGAGAAATAACTAACGCTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| CDS-3UTR CCA 90 bp | AGATCTATTTCACACATTTGCAGGAACTGTTACACTGGTTTCCATAGTGACCACACGAAGAAGAAGAATTaGGTGCCACAAGTGTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: RSISHICRNCYTGFHSDHTKKKN*VPQVLW Trigger: CCATAACACTTGTGGCACCCAATTCTTCTTCTTCGT...GTGGTCACTATGGAAACCAGTGTAACAGTTCCTGCAAATGTGTGAAATAGATCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| CDS-3UTR TCA 90 bp | CATTCCATTGACTCTTCCTTTTCCAATAGTTTCTCCTCTTCAGACTATGTATATCCAGAGATAGATGACTaGGGAAAAGGTACATGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HSIDSSFSNSFSSSDYVYPEIDD*GKGTWE Trigger: CTCCCATGTACCTTTTCCTCAGTCATCTATCTCTGG...ATATACATAGTCTGAAGAGGAGAAACTATTGGAAAAGGAAGAGTCAATGGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| CDS-3UTR TCA 90 bp | TGGCTTTTGGCTTCCTTGATCTTGTGTATGAAGTCATGCTGCTATAAGTTTATAAGTGGTCTATCACATTaGACTTGCAGAAGGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WLLASLILCMKSCCYKFISGLSH*TCRRKA Trigger: GGCTTTCCTTCTGCAAGTTCAATGTGATAGACCACT...TATAAACTTATAGCAGCATGACTTCATACACAAGATCAAGGAAGCCAAAAGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| CDS-3UTR TCA 90 bp | CATAGCGTTAGTTATTTCTCCCCATATTTGTTGATTCTTTTCTCTGCTATCCCAAGTGGTCTATCACATTaGACTTGCAGAAGGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HSVSYFSPYLLILFSAIPSGLSH*TCRRKA Trigger: GGCTTTCCTTCTGCAAGTTCAATGTGATAGACCACT...TGGGATAGCAGAGAAAAGAATCAACAAATATGGGGAGAAATAACTAACGCTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| CDS-3UTR GCA 90 bp | AGATCTATTTCACACATTTGCAGGAACTGTTACACTGGTTTCCATAGTGACCACAGAAGAAGAATTGGGTaGCACAAGTGTTATGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: RSISHICRNCYTGFHSDHRRRIG*HKCYGI Trigger: TATCCCATAACACTTGTGGCACCCAATTCTTCTTCT...GTGGTCACTATGGAAACCAGTGTAACAGTTCCTGCAAATGTGTGAAATAGATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| CDS-3UTR CCA 90 bp | CATAGCGTTAGTTATTTCTCCCCATATTTGTTGATTCTTTTCTCTGCTATCCCAGAAGACAATGAAGAGTaGTATCTGGAGCTTTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HSVSYFSPYLLILFSAIPEDNEE*YLELWV Trigger: GACCCAAAGCTCCAGATACCACTCTTCATTGTCTTC...TGGGATAGCAGAGAAAAGAATCAACAAATATGGGGAGAAATAACTAACGCTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| CDS-3UTR CCA 90 bp | AGATCTATTTCACACATTTGCAGGAACTGTTACACTGGTTTCCATAGTGACCACAGACATAGGAACCTATaGTCAGACAAGCACAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: RSISHICRNCYTGFHSDHRHRNL*SDKHKY Trigger: ATACTTGTGCTTGTCTGACCATAGGTTCCTATGTCT...GTGGTCACTATGGAAACCAGTGTAACAGTTCCTGCAAATGTGTGAAATAGATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| 3UTR CAA 72 bp | ATCACCTCCTTCATTCATGCTTGGCTTTTGGCTTCCTaGATCTTGTGTATGAAGTCATGCTGCTATAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ITSFIHAWLLAS*ILCMKSCCYKF Trigger: AAACTTATAGCAGCATGACTTCATACACAAGATCAAGGAAGCCAAAAGCCAAGCATGAATGAAGGAGGTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| 3UTR CAA 72 bp | AATATTATGATCACCTCCTTCATTCATGCTTGGCTTTaGGCTTCCTTGATCTTGTGTATGAAGTCATGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NIMITSFIHAWL*ASLILCMKSCC Trigger: GCAGCATGACTTCATACACAAGATCAAGGAAGCCAAAAGCCAAGCATGAATGAAGGAGGTGATCATAATATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| CDS-3UTR CCA 90 bp | CATTCCATTGACTCTTCCTTTTCCAATAGTTTCTCCTCTTCAGACTATGTATATGAAGACAATGAAGAGTaGTATCTGGAGCTTTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HSIDSSFSNSFSSSDYVYEDNEE*YLELWV Trigger: GACCCAAAGCTCCAGATACCACTCTTCATTGTCTTC...ATATACATAGTCTGAAGAGGAGAAACTATTGGAAAAGGAAGAGTCAATGGAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| CDS-3UTR CCA 90 bp | CACCTTTCTATGATGAACCTTGGTCTTTGGAGAGATGACTATTATAATAGCTGTACGAAGAAGAAGAATTaGGTGCCACAAGTGTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: HLSMMNLGLWRDDYYNSCTKKKN*VPQVLW Trigger: CCATAACACTTGTGGCACCCAATTCTTCTTCTTCGT...ACAGCTATTATAATAGTCATCTCTCCAAAGACCAAGGTTCATCATAGAAAGGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| CDS-3UTR CCA 90 bp | TGGCTTTTGGCTTCCTTGATCTTGTGTATGAAGTCATGCTGCTATAAGTTTATAACGAAGAAGAAGAATTaGGTGCCACAAGTGTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: WLLASLILCMKSCCYKFITKKKN*VPQVLW Trigger: CCATAACACTTGTGGCACCCAATTCTTCTTCTTCGT...TATAAACTTATAGCAGCATGACTTCATACACAAGATCAAGGAAGCCAAAAGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| 3UTR CAA 72 bp | GAAGTAGAATATTATGATCACCTCCTTCATTCATGCTaGGCTTTTGGCTTCCTTGATCTTGTGTATGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: EVEYYDHLLHSC*AFGFLDLVYEV Trigger: GACTTCATACACAAGATCAAGGAAGCCAAAAGCCAAGCATGAATGAAGGAGGTGATCATAATATTCTACTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| CDS-3UTR GCA 90 bp | TGGCTTTTGGCTTCCTTGATCTTGTGTATGAAGTCATGCTGCTATAAGTTTATAAGAAGAAGAATTGGGTaGCACAAGTGTTATGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: WLLASLILCMKSCCYKFIRRRIG*HKCYGI Trigger: TATCCCATAACACTTGTGGCACCCAATTCTTCTTCT...TATAAACTTATAGCAGCATGACTTCATACACAAGATCAAGGAAGCCAAAAGCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| CDS-3UTR CCA 90 bp | TGGCTTTTGGCTTCCTTGATCTTGTGTATGAAGTCATGCTGCTATAAGTTTATAGTGCCACAAGTGTTATaGGATATGGTTTTGTCTATT | + |
|
Preference number: 4 (lower is better) Translates to: WLLASLILCMKSCCYKFIVPQVL*DMVLSI Trigger: AATAGACAAAACCATATCCCATAACACTTGTGGCAC...TATAAACTTATAGCAGCATGACTTCATACACAAGATCAAGGAAGCCAAAAGCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| CDS-3UTR CAA 90 bp | GTAGACAAGGCTGGCCTTGAACTCAGATATCCACCTGCTTCTGCCTCTCAAGTGCACGAAGAAGAAGAATaGGGTGCCACAAGTGTTATG | + |
|
Preference number: 5 (lower is better) Translates to: VDKAGLELRYPPASASQVHEEEE*GATSVM Trigger: CATAACACTTGTGGCACCCAATTCTTCTTCTTCGTG...CACTTGAGAGGCAGAAGCAGGTGGATATCTGAGTTCAAGGCCAGCCTTGTCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| CDS-3UTR CAA 90 bp | GGCCTTGAACTCAGATATCCACCTGCTTCTGCCTCTCAAGTGCTGGGATTAAAGCACGAAGAAGAAGAATaGGGTGCCACAAGTGTTATG | + |
|
Preference number: 5 (lower is better) Translates to: GLELRYPPASASQVLGLKHEEEE*GATSVM Trigger: CATAACACTTGTGGCACCCAATTCTTCTTCTTCGTG...CTTTAATCCCAGCACTTGAGAGGCAGAAGCAGGTGGATATCTGAGTTCAAGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| CDS-3UTR CAA 90 bp | GTAGACAAGGCTGGCCTTGAACTCAGATATCCACCTGCTTCTGCCTCTCAAGTGTTATGGGATATGGTTTaGTCTATTGAAAGGAGACCT | + |
|
Preference number: 5 (lower is better) Translates to: VDKAGLELRYPPASASQVLWDMV*SIERRP Trigger: AGGTCTCCTTTCAATAGACAAAACCATATCCCATAA...CACTTGAGAGGCAGAAGCAGGTGGATATCTGAGTTCAAGGCCAGCCTTGTCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| CDS CCA 90 bp | AAGAGAAAGCTTTCTGTGGTTATAAAGCCCACGAAGAAGAAGAATTaGGTGCCACAAGTGTTATGGGATATGGTTTTGTCTATTGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: KRKLSVVIKPTKKKN*VPQVLWDMVLSIER Trigger: CCTTTCAATAGACAAAACCATATCCCATAACACTTGTGGCACCCAATTCTTCTTCTTCGTGGGCTTTATAACCACAGAAAGCTTTCTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054737.3 ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| CDS-3UTR CAA 90 bp | TGGCTTTTGGCTTCCTTGATCTTGTGTATGAAGTCATGCTGCTATAAGTTTATACACGAAGAAGAAGAATaGGGTGCCACAAGTGTTATG | + |
|
Preference number: 5 (lower is better) Translates to: WLLASLILCMKSCCYKFIHEEEE*GATSVM Trigger: CATAACACTTGTGGCACCCAATTCTTCTTCTTCGTG...TATAAACTTATAGCAGCATGACTTCATACACAAGATCAAGGAAGCCAAAAGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| CDS-3UTR CAA 90 bp | AGATCTATTTCACACATTTGCAGGAACTGTTACACTGGTTTCCATAGTGACCACTTATGGGATATGGTTTaGTCTATTGAAAGGAGACCT | + |
|
Preference number: 5 (lower is better) Translates to: RSISHICRNCYTGFHSDHLWDMV*SIERRP Trigger: AGGTCTCCTTTCAATAGACAAAACCATATCCCATAA...GTGGTCACTATGGAAACCAGTGTAACAGTTCCTGCAAATGTGTGAAATAGATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
||
| CDS CAA 72 bp | GCTTTCTGTGGTTATAAAGCCCACGAAGAAGAAGAATaGGGTGCCACAAGTGTTATGGGATATGGTTTTGTC | + |
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Preference number: 6 (lower is better) Translates to: AFCGYKAHEEEE*GATSVMGYGFV Trigger: GACAAAACCATATCCCATAACACTTGTGGCACCCAATTCTTCTTCTTCGTGGGCTTTATAACCACAGAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054737.3 ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| CDS CCA 72 bp | CTTTCTGTGGTTATAAAGCCCACGAAGAAGAAGAATTaGGTGCCACAAGTGTTATGGGATATGGTTTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: LSVVIKPTKKKN*VPQVLWDMVLS Trigger: AGACAAAACCATATCCCATAACACTTGTGGCACCCAATTCTTCTTCTTCGTGGGCTTTATAACCACAGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054737.3 ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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| CDS CCA 72 bp | AGAAGAAGAATTGGGTGCCACAAGTGTTATGGGATATaGTTTTGTCTATTGAAAGGAGACCTGACATTACTT | + |
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Preference number: 6 (lower is better) Translates to: RRRIGCHKCYGI*FCLLKGDLTLL Trigger: AAGTAATGTCAGGTCTCCTTTCAATAGACAAAACCATATCCCATAACACTTGTGGCACCCAATTCTTCTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054737.3 ENSMUST00000213177.2 ENSMUST00000213713.2 ENSMUST00000216888.2 |
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